MD10G1327800.v1.1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000724
Physical Location & Seq
Reverse (-)
40733773 .. 40736872
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1327800.v1.1.491

Sequence Viewer

Length: 2097 bp
ATGGGGTACTGGAGAACGCTAGCGGTTGTGCCAGATCCAAACAGGGTGGGAAAAGAGGGAGAGGATACTTTAAGGCGAATTGCAAACTTGAAATGTCCCTATCAATGTGCCATGGAGGATAACTGGGAAGGCGTAAAGGAATACTTAGAGGAAAATCCCGAAGAACTGCTCAATCAAATGACGGTGGGAGGGGACACTGTGTTTCACCTTGCGGCTTCTTTGGGCAGCAAATCACAAGGCAAAAGAGTCCTCCAAGTGTTGATCAATATACTCAGGAATTCGACCAGCTATGCCGAGAGTTCGGCCCTAAGGGTTCCGAATAACAACGGAAACAATACTCTTCACGAGGTGAGTGCGTCCGGCAATGTGGAAGCGGCAAACTACTTGGTGAGCAACTTCAACATGCCTGCTCCGGAAGAGATCATCATCAGTACTAGTGCACGTAGTACTGATAAAGAGAATGATGCGCTGCCGCTGCTGGAGACACGGAACCATTTAGGAGAAACTCCGCTCTTCAGGGCCGCTGCTCTCGGTCACACTGACTTGGTCAAGTTTTATGCTGGCAAACTGCTGGAGGATAATCGGGTCAATCTTTGGATGCACTTCCACAGAAATGACAAAATGTCTATTCTTCATATCGCCGTCATTGCACAACATTTCGAGACTGCTCTTTGGTTACTGGAGTGCTGCCCCTCTCTAGCGCACCAAACTGAAGATAAAGGATTGACAAGTCTTCAATTGCTAGCCCAAATGCCAAGTGCCTTTGAGCCACAATATCAACGAAGCAAATGGAAGATGCTAATTTATTATTGCCTTCCTGCTTATGGAGGAGATGTGGTCACACCAAATCAGAAAGATGATGTAGAGATCAACTTGGTTAGCAACCAGCCGCGCCGTCAATCCATCTCTAGGAACAAGCTTTCAGGCTTTGCTAGGGTTTACTCTTCAGTATGGGACTCCCTTGCTAAAAAAGGCTCGCAGGGCGGCATAATCTACAAGATATGGAAGGACAAGAAAAACAAAAAATCACTAGAGAAAATCGTCCCGTTGCTCGTTAATTCGGACTATTCTTGGTTGAGTAGTAACAAGCAAGCAGACACCAAGACCATTTCTCTGGGGTCAGTGGAAACTCTTAGTAAAGATGGTGATGATGACGGAGACGAAAAAGGAAAGGCAGCCTCAAAAGCAACCAAATCAGAGGGATATGGTGATGATGGAGGTAAAAAAGGAAAGGCGGTAGCAGAAGCAACCAAATCGGATAAGGGGGTGACGACTAAGGTTTATGACTCTACCCCACTGATTATAGCAACTGTCAAAGGAACTGTGTCCATTGTGAAGGAGATACTTGAGCAGCATCCTCAGGCGGTTGAGCACATTGACAAAAACGAACGCAACATTTTGCATGTGGCCATTAAGCATCGTCAGAAAGCAATCCTTAAGCTTATCAAAAGCAAACCAAGCGTGATGTCGAGGCTGAATGAGAGGATTGACTGCGATGGCAACACCGTATTGCACCAGGCTGCAGATAGGAGTTACTACTCTATATCATTGTCTCAAAATTTAATTGGCCCTGCCATGCAATTGCAAGCAGAGCTACAATGGAGGCTGCATGTGCAAGATATACTACCGCCTCATTATGGCTTGCACCATAACAACAAGGATCAGACAGCAGAGGAGCTGTTCTACGATGAGCATAACGAACTCCTGAAGTCAGCACAAGAATGGGTAAAAGAAACGGCTCAGTCATGCTCAACCGTGGCGGTGCTAGTGGCCACTGTGGTATTTGCAGCCGCCTACGCCATCCCCGGGGGTAATGACCAAAGTGGCCGTCCTGTTTTCCAGGACGATCCTCTCTTTTTGCTCTTCACCTGCATGGACATTGTGGCCATCGCCTGTTCATTATCTTCTGTGGCATTCTTTCTCTCGGTCCTCTCCTCCCCTCTCGAGTATCCACTCTTCATCACCAATATTCCTCGCAAGATCATGATTGGTTTCATCTTGCTCTTCTTGTCAATGGCAACCACCATGCTCGCCTTTGCCGCCACTATTTTACTCCTGATTCGCGTCGAGAAGAAATGGACCAAGTCTATACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

699

Amino Acids

77.64

Weight (kDa)

6.84

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 419 - 483 1.6e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 435 - 514 1.9e-06 Ankyrin repeats (3 copies)
PGG PF13962 574 - 684 1.4e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1877
Acc36I ACCTGC 1 cut(s) 1877
AccBSI CCGCTC 1 cut(s) 511
AccII CGCG 2 cut(s) 892, 2064
AccIII TCCGGA 1 cut(s) 412
AclWI GGATC 3 cut(s) 29, 1668, 1841
AcoI YGGCCR 4 cut(s) 1407, 1770, 1825, 1884
AcsI RAATTY 2 cut(s) 277, 1558
AcuI CTGAAG 4 cut(s) 499, 732, 930, 1727
AdeI CACNNNGTG 1 cut(s) 349
AfaI GTAC 3 cut(s) 8, 433, 448
AfiI CCNNNNNNNGG 4 cut(s) 824, 909, 1637, 1806
AflII CTTAAG 1 cut(s) 1436
AgsI TTSAA 3 cut(s) 91, 400, 737
AhdI GACNNNNNGTC 1 cut(s) 622
AhlI ACTAGT 1 cut(s) 434
AjnI CCWGG 2 cut(s) 1515, 1839
AluBI AGCT 5 cut(s) 288, 919, 1441, 1594, 1678
AluI AGCT 5 cut(s) 288, 919, 1441, 1594, 1678
Alw21I GWGCWC 2 cut(s) 442, 1374
Alw26I GTCTC 4 cut(s) 476, 656, 1152, 1557
Alw44I GTGCAC 1 cut(s) 438
AlwI GGATC 3 cut(s) 29, 1668, 1841
Ama87I CYCGRG 2 cut(s) 1805, 1943
Aor13HI TCCGGA 1 cut(s) 412
AoxI GGCC 7 cut(s) 303, 519, 1407, 1567, 1770, 1825, 1884
ApaLI GTGCAC 1 cut(s) 438
ApoI RAATTY 2 cut(s) 277, 1558
ArsI GACNNNNNNTTYG 2 cut(s) 1813, 1845
AspLEI GCGC 3 cut(s) 469, 703, 894
AspS9I GGNCC 5 cut(s) 304, 519, 1568, 1927, 2079
AsuC2I CCSGG 2 cut(s) 1806, 1807
AsuHPI GGTGA 8 cut(s) 197, 361, 400, 1157, 1220, 1279, 1858, 1954
AsuNHI GCTAGC 2 cut(s) 19, 742
AvaI CYCGRG 2 cut(s) 1805, 1943
AvaII GGWCC 2 cut(s) 1927, 2079
AxyI CCTNAGG 2 cut(s) 308, 1359
BaeGI GKGCMC 1 cut(s) 442
BalI TGGCCA 3 cut(s) 1409, 1772, 1886
BarI GAAGNNNNNNTAC 2 cut(s) 1940, 1972
BauI CACGAG 1 cut(s) 344
BbsI GAAGAC 1 cut(s) 725
Bbv12I GWGCWC 2 cut(s) 442, 1374
BccI CCATC 6 cut(s) 911, 1136, 1208, 1490, 1808, 1895
BceAI ACGGC 4 cut(s) 626, 879, 1752, 1812
BcgI CGANNNNNNTGC 4 cut(s) 335, 369, 1236, 1270
BciT130I CCWGG 2 cut(s) 1517, 1841
BciVI GTATCC 2 cut(s) 58, 1959
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 2 cut(s) 1806, 1807
BcoDI GTCTC 4 cut(s) 476, 656, 1152, 1557
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 8 cut(s) 20, 435, 698, 743, 909, 933, 1031, 1766
BfmI CTRYAG 1 cut(s) 1521
BfrI CTTAAG 1 cut(s) 1436
BfuAI ACCTGC 1 cut(s) 1877
BfuI GTATCC 2 cut(s) 58, 1959
BmcAI AGTACT 2 cut(s) 433, 448
Bme1390I CCNGG 4 cut(s) 1517, 1806, 1807, 1841
Bme18I GGWCC 2 cut(s) 1927, 2079
BmeRI GACNNNNNGTC 1 cut(s) 622
BmeT110I CYCGRG 2 cut(s) 1805, 1943
BmgT120I GGNCC 5 cut(s) 304, 519, 1568, 1927, 2079
BmiI GGNNCC 2 cut(s) 315, 491
BmrFI CCNGG 4 cut(s) 1517, 1806, 1807, 1841
BmrI ACTGGG 1 cut(s) 133
BmsI GCATC 5 cut(s) 454, 588, 786, 1363, 1426
BmtI GCTAGC 2 cut(s) 23, 746
BmuI ACTGGG 1 cut(s) 133
BpiI GAAGAC 1 cut(s) 725
BpmI CTGGAG 4 cut(s) 31, 500, 593, 701
BpuEI CTTGAG 1 cut(s) 1367
BpuMI CCSGG 2 cut(s) 1806, 1807
BsaAI YACGTR 1 cut(s) 443
BsaBI GATNNNNATC 1 cut(s) 425
BsaJI CCNNGG 5 cut(s) 111, 1755, 1804, 1805, 1806
BsaWI WCCGGW 1 cut(s) 412
BsaXI ACNNNNNCTCC 4 cut(s) 819, 822, 849, 852
Bsc4I CCNNNNNNNGG 4 cut(s) 824, 909, 1637, 1806
Bse1I ACTGG 3 cut(s) 14, 128, 684
Bse21I CCTNAGG 2 cut(s) 308, 1359
Bse3DI GCAATG 2 cut(s) 370, 645
Bse8I GATNNNNATC 1 cut(s) 425
BseAI TCCGGA 1 cut(s) 412
BseBI CCWGG 2 cut(s) 1517, 1841
BseDI CCNNGG 5 cut(s) 111, 1755, 1804, 1805, 1806
BseGI GGATG 3 cut(s) 603, 1354, 1800
BseJI GATNNNNATC 1 cut(s) 425
BseLI CCNNNNNNNGG 4 cut(s) 824, 909, 1637, 1806
BseMI GCAATG 2 cut(s) 370, 645
BseMII CTCAG 3 cut(s) 286, 1373, 1754
BseNI ACTGG 3 cut(s) 14, 128, 684
BseRI GAGGAG 3 cut(s) 843, 1688, 1924
BseSI GKGCMC 1 cut(s) 442
Bsh1236I CGCG 2 cut(s) 892, 2064
BshFI GGCC 7 cut(s) 305, 521, 1409, 1569, 1772, 1827, 1886
BsiHKAI GWGCWC 2 cut(s) 442, 1374
BsiHKCI CYCGRG 2 cut(s) 1805, 1943
BsiSI CCGG 3 cut(s) 360, 413, 1806
BslFI GGGAC 4 cut(s) 81, 206, 968, 1028
BslI CCNNNNNNNGG 4 cut(s) 824, 909, 1637, 1806
BsmAI GTCTC 4 cut(s) 476, 656, 1152, 1557
BsmBI CGTCTC 1 cut(s) 1152
BsmFI GGGAC 4 cut(s) 81, 206, 968, 1028
BsmI GAATGC 1 cut(s) 1913
BsnI GGCC 7 cut(s) 305, 521, 1409, 1569, 1772, 1827, 1886
BsoBI CYCGRG 2 cut(s) 1805, 1943
Bsp1286I GDGCHC 2 cut(s) 442, 1374
Bsp13I TCCGGA 1 cut(s) 412
Bsp143I GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
Bsp19I CCATGG 1 cut(s) 111
BspANI GGCC 7 cut(s) 305, 521, 1409, 1569, 1772, 1827, 1886
BspCNI CTCAG 3 cut(s) 285, 1372, 1753
BspEI TCCGGA 1 cut(s) 412
BspFNI CGCG 2 cut(s) 892, 2064
BspHI TCATGA 1 cut(s) 1983
BspLI GGNNCC 2 cut(s) 315, 491
BspMAI CTGCAG 1 cut(s) 1525
BspMI ACCTGC 1 cut(s) 1877
BspOI GCTAGC 2 cut(s) 23, 746
BspPI GGATC 3 cut(s) 29, 1668, 1841
BspQI GCTCTTC 3 cut(s) 518, 1868, 2009
BspTI CTTAAG 1 cut(s) 1436
BsrBI CCGCTC 1 cut(s) 511
BsrDI GCAATG 2 cut(s) 370, 645
BsrI ACTGG 3 cut(s) 14, 128, 684
BssECI CCNNGG 5 cut(s) 111, 1755, 1804, 1805, 1806
BssMI GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
BssSI CACGAG 1 cut(s) 344
BssT1I CCWWGG 1 cut(s) 111
Bst2BI CACGAG 1 cut(s) 344
Bst2UI CCWGG 2 cut(s) 1517, 1841
Bst4CI ACNGT 7 cut(s) 184, 199, 1312, 1324, 1507, 1756, 1777
Bst6I CTCTTC 7 cut(s) 345, 411, 518, 949, 1868, 1961, 2009
BstAFI CTTAAG 1 cut(s) 1436
BstBAI YACGTR 1 cut(s) 443
BstC8I GCNNGC 9 cut(s) 21, 408, 562, 744, 977, 1092, 1587, 1643, 2031
BstDEI CTNAG 7 cut(s) 145, 272, 308, 1133, 1275, 1359, 1740
BstDSI CCRYGG 2 cut(s) 111, 1755
BstF5I GGATG 3 cut(s) 603, 1354, 1800
BstFNI CGCG 2 cut(s) 892, 2064
BstHHI GCGC 3 cut(s) 469, 703, 894
BstKTI GATC 7 cut(s) 37, 264, 423, 870, 1663, 1849, 1983
BstMAI GTCTC 4 cut(s) 476, 656, 1152, 1557
BstMBI GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
BstMWI GCNNNNNNNGC 9 cut(s) 475, 647, 981, 1184, 1458, 1591, 1612, 1796, 2039
BstNI CCWGG 2 cut(s) 1517, 1841
BstNSI RCATGY 3 cut(s) 406, 1406, 1613
BstSCI CCNGG 4 cut(s) 1515, 1804, 1805, 1839
BstSFI CTRYAG 1 cut(s) 1521
BstSLI GKGCMC 1 cut(s) 442
BstUI CGCG 2 cut(s) 892, 2064
BstV2I GAAGAC 1 cut(s) 725
BstX2I RGATCY 1 cut(s) 34
BstXI CCANNNNNNTGG 1 cut(s) 1114
BstYI RGATCY 1 cut(s) 34
Bsu36I CCTNAGG 2 cut(s) 308, 1359
BsuI GTATCC 2 cut(s) 58, 1959
BsuRI GGCC 7 cut(s) 305, 521, 1409, 1569, 1772, 1827, 1886
BtgI CCRYGG 2 cut(s) 111, 1755
BtgZI GCGATG 2 cut(s) 1509, 1873
BtsCI GGATG 3 cut(s) 603, 1354, 1800
BtsIMutI CAGTG 5 cut(s) 195, 537, 1128, 1295, 1773
BveI ACCTGC 1 cut(s) 1877
Cac8I GCNNGC 9 cut(s) 21, 408, 562, 744, 977, 1092, 1587, 1643, 2031
CciI TCATGA 1 cut(s) 1983
CfoI GCGC 3 cut(s) 469, 703, 894
Cfr13I GGNCC 5 cut(s) 304, 519, 1568, 1927, 2079
Cfr9I CCCGGG 1 cut(s) 1805
CseI GACGC 2 cut(s) 345, 2053
Csp6I GTAC 3 cut(s) 7, 432, 447
CspCI CAANNNNNGTGG 2 cut(s) 27, 62
CviAII CATG 9 cut(s) 112, 403, 1403, 1576, 1610, 1746, 1873, 1984, 2026
CviQI GTAC 3 cut(s) 7, 432, 447
DdeI CTNAG 7 cut(s) 145, 272, 308, 1133, 1275, 1359, 1740
DpnI GATC 7 cut(s) 36, 263, 422, 869, 1662, 1848, 1982
DpnII GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
DraIII CACNNNGTG 1 cut(s) 349
DriI GACNNNNNGTC 1 cut(s) 622
EaeI YGGCCR 4 cut(s) 1407, 1770, 1825, 1884
Eam1104I CTCTTC 7 cut(s) 345, 411, 518, 949, 1868, 1961, 2009
Eam1105I GACNNNNNGTC 1 cut(s) 622
EarI CTCTTC 7 cut(s) 345, 411, 518, 949, 1868, 1961, 2009
Eco130I CCWWGG 1 cut(s) 111
Eco47I GGWCC 2 cut(s) 1927, 2079
Eco57I CTGAAG 4 cut(s) 499, 732, 930, 1727
Eco81I CCTNAGG 2 cut(s) 308, 1359
Eco88I CYCGRG 2 cut(s) 1805, 1943
EcoRI GAATTC 1 cut(s) 277
EcoRII CCWGG 2 cut(s) 1515, 1839
EcoT14I CCWWGG 1 cut(s) 111
ErhI CCWWGG 1 cut(s) 111
Esp3I CGTCTC 1 cut(s) 1152
FaeI CATG 9 cut(s) 115, 406, 1406, 1579, 1613, 1749, 1876, 1987, 2029
FalI AAGNNNNNCTT 4 cut(s) 128, 160, 1419, 1451
FaqI GGGAC 4 cut(s) 81, 206, 968, 1028
FatI CATG 9 cut(s) 111, 402, 1402, 1575, 1609, 1745, 1872, 1983, 2025
FbaI TGATCA 1 cut(s) 261
FokI GGATG 3 cut(s) 610, 1341, 1787
FspBI CTAG 8 cut(s) 20, 435, 698, 743, 909, 933, 1031, 1766
GlaI GCGC 3 cut(s) 468, 702, 893
GsuI CTGGAG 4 cut(s) 31, 500, 593, 701
HaeIII GGCC 7 cut(s) 305, 521, 1409, 1569, 1772, 1827, 1886
HapII CCGG 3 cut(s) 360, 413, 1806
HgaI GACGC 2 cut(s) 345, 2053
HhaI GCGC 3 cut(s) 469, 703, 894
Hin1II CATG 9 cut(s) 115, 406, 1406, 1579, 1613, 1749, 1876, 1987, 2029
Hin6I GCGC 3 cut(s) 467, 701, 892
HinP1I GCGC 3 cut(s) 467, 701, 892
HindIII AAGCTT 2 cut(s) 917, 1439
HinfI GANTC 4 cut(s) 246, 956, 1286, 2059
HpaII CCGG 3 cut(s) 360, 413, 1806
HphI GGTGA 8 cut(s) 197, 361, 400, 1157, 1220, 1279, 1858, 1954
Hpy166II GTNNAC 2 cut(s) 440, 940
Hpy188I TCNGA 7 cut(s) 318, 852, 1063, 1198, 1258, 1425, 1665
Hpy8I GTNNAC 2 cut(s) 440, 940
Hpy99I CGWCG 1 cut(s) 2069
HpyAV CCTTC 4 cut(s) 122, 824, 1000, 1330
HpyCH4III ACNGT 7 cut(s) 184, 199, 1312, 1324, 1507, 1756, 1777
HpyCH4IV ACGT 1 cut(s) 442
HpyF10VI GCNNNNNNNGC 9 cut(s) 475, 647, 981, 1184, 1458, 1591, 1612, 1796, 2039
HpyF3I CTNAG 7 cut(s) 145, 272, 308, 1133, 1275, 1359, 1740
HpySE526I ACGT 1 cut(s) 442
Hsp92II CATG 9 cut(s) 115, 406, 1406, 1579, 1613, 1749, 1876, 1987, 2029
HspAI GCGC 3 cut(s) 467, 701, 892
Kpn2I TCCGGA 1 cut(s) 412
Ksp22I TGATCA 1 cut(s) 261
Kzo9I GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
LguI GCTCTTC 3 cut(s) 518, 1868, 2009
LmnI GCTCC 2 cut(s) 415, 1675
LweI GCATC 5 cut(s) 454, 588, 786, 1363, 1426
MaeI CTAG 8 cut(s) 20, 435, 698, 743, 909, 933, 1031, 1766
MaeII ACGT 1 cut(s) 442
MaeIII GTNAC 6 cut(s) 533, 675, 838, 1082, 1267, 1532
MalI GATC 7 cut(s) 36, 263, 422, 869, 1662, 1848, 1982
MbiI CCGCTC 1 cut(s) 511
MboI GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
MfeI CAATTG 2 cut(s) 737, 1580
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 2 cut(s) 442, 1374
MlsI TGGCCA 3 cut(s) 1409, 1772, 1886
MluCI AATT 8 cut(s) 78, 277, 737, 801, 1057, 1558, 1563, 1580
MluNI TGGCCA 3 cut(s) 1409, 1772, 1886
MlyI GAGTC 3 cut(s) 255, 950, 1280
Mox20I TGGCCA 3 cut(s) 1409, 1772, 1886
MroI TCCGGA 1 cut(s) 412
MscI TGGCCA 3 cut(s) 1409, 1772, 1886
MseI TTAA 6 cut(s) 71, 1056, 1413, 1437, 1562, 2095
MslI CAYNNNNRTG 3 cut(s) 612, 1720, 1871
Msp20I TGGCCA 3 cut(s) 1409, 1772, 1886
MspA1I CMGCKG 2 cut(s) 475, 524
MspCI CTTAAG 1 cut(s) 1436
MspI CCGG 3 cut(s) 360, 413, 1806
MspR9I CCNGG 4 cut(s) 1517, 1806, 1807, 1841
MunI CAATTG 2 cut(s) 737, 1580
Mva1269I GAATGC 1 cut(s) 1913
MvaI CCWGG 2 cut(s) 1517, 1841
MvnI CGCG 2 cut(s) 892, 2064
MwoI GCNNNNNNNGC 9 cut(s) 475, 647, 981, 1184, 1458, 1591, 1612, 1796, 2039
NciI CCSGG 2 cut(s) 1806, 1807
NcoI CCATGG 1 cut(s) 111
NdeII GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
NheI GCTAGC 2 cut(s) 19, 742
NlaIII CATG 9 cut(s) 115, 406, 1406, 1579, 1613, 1749, 1876, 1987, 2029
NlaIV GGNNCC 2 cut(s) 315, 491
NmeAIII GCCGAG 1 cut(s) 319
NmuCI GTSAC 3 cut(s) 533, 838, 1267
NspI RCATGY 3 cut(s) 406, 1406, 1613
PaeR7I CTCGAG 1 cut(s) 1943
PagI TCATGA 1 cut(s) 1983
PaqCI CACCTGC 1 cut(s) 1877
PciSI GCTCTTC 3 cut(s) 518, 1868, 2009
PctI GAATGC 1 cut(s) 1913
PfeI GAWTC 1 cut(s) 2059
PflFI GACNNNGTC 2 cut(s) 545, 2083
PfoI TCCNGGA 1 cut(s) 1839
PleI GAGTC 3 cut(s) 254, 950, 1280
PpsI GAGTC 3 cut(s) 254, 950, 1280
Ppu21I YACGTR 1 cut(s) 443
Psp6I CCWGG 2 cut(s) 1515, 1839
PspGI CCWGG 2 cut(s) 1515, 1839
PspN4I GGNNCC 2 cut(s) 315, 491
PspPI GGNCC 5 cut(s) 304, 519, 1568, 1927, 2079
PstI CTGCAG 1 cut(s) 1525
PsuI RGATCY 1 cut(s) 34
PsyI GACNNNGTC 2 cut(s) 545, 2083
RsaI GTAC 3 cut(s) 8, 433, 448
RsaNI GTAC 3 cut(s) 7, 432, 447
RseI CAYNNNNRTG 3 cut(s) 612, 1720, 1871
SapI GCTCTTC 3 cut(s) 518, 1868, 2009
SaqAI TTAA 6 cut(s) 71, 1056, 1413, 1437, 1562, 2095
Sau3AI GATC 7 cut(s) 34, 261, 420, 867, 1660, 1846, 1980
Sau96I GGNCC 5 cut(s) 304, 519, 1568, 1927, 2079
ScaI AGTACT 2 cut(s) 433, 448
SchI GAGTC 3 cut(s) 255, 950, 1280
ScrFI CCNGG 4 cut(s) 1517, 1806, 1807, 1841
SduI GDGCHC 2 cut(s) 442, 1374
SfaNI GCATC 5 cut(s) 454, 588, 786, 1363, 1426
SfcI CTRYAG 1 cut(s) 1521
Sfr274I CTCGAG 1 cut(s) 1943
SinI GGWCC 2 cut(s) 1927, 2079
SlaI CTCGAG 1 cut(s) 1943
SmaI CCCGGG 1 cut(s) 1807
SmiMI CAYNNNNRTG 3 cut(s) 612, 1720, 1871
SmlI CTYRAG 3 cut(s) 1346, 1436, 1943
SmoI CTYRAG 3 cut(s) 1346, 1436, 1943
SpeI ACTAGT 1 cut(s) 434
Sse9I AATT 8 cut(s) 78, 277, 737, 801, 1057, 1558, 1563, 1580
SspI AATATT 1 cut(s) 1969
SspMI CTAG 8 cut(s) 20, 435, 698, 743, 909, 933, 1031, 1766
StyD4I CCNGG 4 cut(s) 1515, 1804, 1805, 1839
StyI CCWWGG 1 cut(s) 111
TaaI ACNGT 7 cut(s) 184, 199, 1312, 1324, 1507, 1756, 1777
TaiI ACGT 1 cut(s) 445
TaqI TCGA 5 cut(s) 281, 660, 1469, 1944, 2067
TaqII GACCGA 2 cut(s) 521, 1915
TasI AATT 8 cut(s) 78, 277, 737, 801, 1057, 1558, 1563, 1580
TatI WGTACW 2 cut(s) 431, 446
TauI GCSGC 8 cut(s) 215, 377, 475, 524, 892, 987, 1793, 2042
TfiI GAWTC 1 cut(s) 2059
Tru1I TTAA 6 cut(s) 71, 1056, 1413, 1437, 1562, 2095
Tru9I TTAA 6 cut(s) 71, 1056, 1413, 1437, 1562, 2095
TscAI CASTG 5 cut(s) 202, 544, 1128, 1302, 1780
TseFI GTSAC 3 cut(s) 533, 838, 1267
Tsp45I GTSAC 3 cut(s) 533, 838, 1267
TspDTI ATGAA 4 cut(s) 623, 1887, 1948, 1984
TspGWI ACGGA 3 cut(s) 342, 502, 1170
TspMI CCCGGG 1 cut(s) 1805
TspRI CASTG 5 cut(s) 202, 544, 1128, 1302, 1780
Tth111I GACNNNGTC 2 cut(s) 545, 2083
Vha464I CTTAAG 1 cut(s) 1436
VneI GTGCAC 1 cut(s) 438
VpaK11BI GGWCC 2 cut(s) 1927, 2079
XapI RAATTY 2 cut(s) 277, 1558
XceI RCATGY 3 cut(s) 406, 1406, 1613
XhoI CTCGAG 1 cut(s) 1943
XmaI CCCGGG 1 cut(s) 1805
XspI CTAG 8 cut(s) 20, 435, 698, 743, 909, 933, 1031, 1766
ZrmI AGTACT 2 cut(s) 433, 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.