Prupe.4G014300_v2.0.a1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000724
Physical Location & Seq
Forward (+)
663609 .. 666851
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G014300.1

Sequence Viewer

Length: 2142 bp
ATGGAGGACTTAGAGATAGAGCACGCAGATATGGCGTACTGGAGAACGGAAGATGTTCTTAAAGAAGAGGGAGTGGGCGAGAGTGCAAGTGAAATTGAAGTACTGAAACTTCCTTATGATCTAGCCATGGAGAATGACTGGGAAGGCATGAAGAGATACTACGTGGACAATCCACGAAAACTGAATTCTCCAATGACAGTGGACGAAGACACTGCATTGCACATTGTAGCTTCCTGCTGCACGAGCAAATCACAGGGCAAACAAGTCCTTGAATTCTTGATTAATTTACTGCCACCAAGCTATGATGAAAGATGCAAGGCCGTGAGGGTTCCAAATAAACTCGGCAACAACGTTCTTCACGAGGTGGCGATGTCCGGCAGTCTGGAGGCAGCAACTTTCTTAGTGAGCAACTTCAACAAACCTGCAGGAAAAACTAGTAACGAGGAGAATTCTACACTGCCTCTGCTAGATATTCGGAACGAGTTAGGAGAATCGCCATTGTACAGGGCTGCTGCTCTTGGTCACCCTGACCTGGTCCAGTTTTTTGCTGAAAAACTGGAGGAGAATCCGGAGAATCTTCGGAGGCACTTCCACCGAAATGATAGAATGTCCATTCTTCATATCGCAGTCATTGGCCAACAATTTAGGACTGCTCTTTGGTTGCAGAGGAAGTACCCATTTCTTGCAACTAAGAGGGAAGGTAAAGGATTGACAAGCCTTCAATTGCTAGCCCAAATGCCAACTGCCTTCACACCACAATTTCAACAAAGCAGATGGAAGATGCTCATATATTATTGCCTTCCTGCTCGAGACCTGGAGGTCACAACAAATCCCAAGGATGATGTGGAGAGCAGCTTGGGCAGCAACCAAGACCCCCAAGCCATCTCTTGGAAGAAGCCTGAAGGTATTCTGAAGGTGTACACTACCCTGTGGGACTTCCTTGCTAAAGAAATGGACATAATCGAAAAGATCTGGAGGGATAAGAGAATTAAACATGCTCTTAAAAACCTCATCCCTTTGCTCGTCGAGAAAGACTATTCATGGCAGAATTCTAAAGAAGCAAAAGGCAAGACGATTTCTCTGGGGTCAGTGGAAAATCTTTGTAAGGGTGATAATGATGGAGGAGATCAACAAGGAAAGGATTCCGCAGAACCAACCAATTCTAAGAAGCAGAGCATTTATAAGTATAACCCATTGCTTATAGCAACTATCACTGGAATTGTGCCTATTGTTGCAGAGATACTTAGGCAGCATCCTCAAGCAGCTGAGCACGTTAGCCATAGTGAACAGAACATTTTGCATCTGGCCATTAAGCACCGTCAAAGAGAGATCCTTGAGCTTCTAAAAAGGAAGCCAATAACCATCTCAAGGTTGAATGAGATGATTGACAGTGATGGCAACACCATATTGCACCAAGCTGCAGATAGGAGCTACTACTCTGTAGCAATTTCTGAGAAATTAATTGGCCCAGCCATGCAATTGCAAGCAGAGTTGCGTTGGATGATGGGTGTGAAGAACATATTACCACCTCATTACATCATGCACCACAACAACAAGGATCAGACAGCGGAGGAGCTGTTCAATGATGAGCATAATGAGCTTCTGAAGTCGGCACAAGAATGGATAAAAGACACAGCACAGTCGTGCTCAACTGTGGCTGTGCTGGTGGCCACCGTTGTCTTTGCAGCCGCCTATGCCATGCCTGGGGGTAACGAACCAAATGGCCTTCCTGTTTTCCATGATTCACCTCTCTTCTGGCTCTTCACCTGCATGGACGTCGTGGCCATCGCCTGCTCATTGTCTTCGGTAGCCTTTTTCCTCTCCATCCTCTCCTCTCCCCTTGAGTACCCATTTTTCTGTCACGGTCTTCCCCGCAAGCTCATGATCGGGTTCACCTTGCTCTTCTTGTCCATGGCAACCACCATGCTCGCCTTTGCTGCTACTATTTTGCTTGTGATTCGTATCGAGAAGAAATGGACTAAGTCTCTGCTTTACTGTATTGCGTTTTTTCCGGTCCCTCTATTTGGCTTGCTGCAATTTCCTATGTATCAGAAAGTAACCAAGATTTTCCTCCCCTTCTTCATTCCCTTTCTCGGCTTTTCGAAGAGGAGATCAATATGTGGTAAGAGCAAGGCGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

714

Amino Acids

80.86

Weight (kDa)

6.72

Isoelectric Point (pI)

53.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1182
AarI CACCTGC 1 cut(s) 1775
AasI GACNNNNNNGTC 1 cut(s) 818
AatII GACGTC 1 cut(s) 1779
Acc36I ACCTGC 2 cut(s) 430, 1775
AccB7I CCANNNNNTGG 1 cut(s) 888
AccIII TCCGGA 1 cut(s) 568
AciI CCGC 4 cut(s) 1146, 1568, 1689, 1873
AclI AACGTT 1 cut(s) 351
AclWI GGATC 2 cut(s) 1324, 1566
AcoI YGGCCR 4 cut(s) 634, 1305, 1668, 1782
AcsI RAATTY 4 cut(s) 184, 272, 448, 1048
AcuI CTGAAG 3 cut(s) 921, 932, 1625
AcyI GRCGYC 1 cut(s) 1776
AdeI CACNNNGTG 1 cut(s) 364
AfaI GTAC 6 cut(s) 38, 102, 503, 674, 920, 1847
AfiI CCNNNNNNNGG 6 cut(s) 532, 888, 1368, 1704, 2024, 2093
AgsI TTSAA 7 cut(s) 98, 272, 415, 722, 764, 1375, 1582
AhlI ACTAGT 1 cut(s) 434
AjnI CCWGG 3 cut(s) 531, 813, 1702
AleI CACNNNNGTG 1 cut(s) 1642
AloI GAACNNNNNNTCC 2 cut(s) 1562, 1594
Alw21I GWGCWC 3 cut(s) 24, 1272, 1649
Alw26I GTCTC 2 cut(s) 804, 1989
AlwI GGATC 2 cut(s) 1324, 1566
Ama87I CYCGRG 1 cut(s) 807
Aor13HI TCCGGA 1 cut(s) 568
AoxI GGCC 7 cut(s) 318, 634, 1305, 1465, 1668, 1723, 1782
ApoI RAATTY 4 cut(s) 184, 272, 448, 1048
AseI ATTAAT 2 cut(s) 282, 1460
Asp700I GAANNNNTTC 3 cut(s) 54, 906, 1141
AspS9I GGNCC 3 cut(s) 535, 1466, 2014
AsuHPI GGTGA 5 cut(s) 515, 1121, 1737, 1756, 1885
AsuII TTCGAA 1 cut(s) 2102
AsuNHI GCTAGC 1 cut(s) 727
AvaI CYCGRG 1 cut(s) 807
AvaII GGWCC 2 cut(s) 535, 2014
BalI TGGCCA 4 cut(s) 636, 1307, 1670, 1784
BarI GAAGNNNNNNTAC 4 cut(s) 93, 125, 143, 175
BauI CACGAG 2 cut(s) 241, 359
BbsI GAAGAC 3 cut(s) 213, 1794, 1859
Bbv12I GWGCWC 3 cut(s) 24, 1272, 1649
BccI CCATC 8 cut(s) 768, 890, 1112, 1370, 1388, 1498, 1793, 1832
BceAI ACGGC 1 cut(s) 305
BcgI CGANNNNNNTGC 4 cut(s) 194, 228, 1759, 1793
BciT130I CCWGG 3 cut(s) 533, 815, 1704
BcoDI GTCTC 2 cut(s) 804, 1989
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 4 cut(s) 122, 435, 467, 728
BfmI CTRYAG 3 cut(s) 423, 1419, 1440
BfuAI ACCTGC 2 cut(s) 430, 1775
BglII AGATCT 1 cut(s) 969
BlpI GCTNAGC 1 cut(s) 1266
BmcAI AGTACT 1 cut(s) 102
Bme1390I CCNGG 3 cut(s) 533, 815, 1704
Bme18I GGWCC 2 cut(s) 535, 2014
BmeT110I CYCGRG 1 cut(s) 807
BmgT120I GGNCC 3 cut(s) 535, 1466, 2014
BmiI GGNNCC 2 cut(s) 330, 2016
BmrFI CCNGG 3 cut(s) 533, 815, 1704
BmrI ACTGGG 1 cut(s) 148
BmsI GCATC 4 cut(s) 302, 771, 1261, 1309
BmtI GCTAGC 1 cut(s) 731
BmuI ACTGGG 1 cut(s) 148
BpiI GAAGAC 3 cut(s) 213, 1794, 1859
BpmI CTGGAG 5 cut(s) 61, 404, 578, 836, 994
Bpu1102I GCTNAGC 1 cut(s) 1266
Bpu14I TTCGAA 1 cut(s) 2102
BpuEI CTTGAG 4 cut(s) 1242, 1351, 1355, 1862
BsaAI YACGTR 1 cut(s) 163
BsaBI GATNNNNATC 1 cut(s) 1961
BsaHI GRCGYC 1 cut(s) 1776
BsaI GGTCTC 1 cut(s) 804
BsaJI CCNNGG 4 cut(s) 126, 834, 1703, 1911
BsaWI WCCGGW 2 cut(s) 568, 2011
BsaXI ACNNNNNCTCC 2 cut(s) 1562, 1592
Bsc4I CCNNNNNNNGG 6 cut(s) 532, 888, 1368, 1704, 2024, 2093
Bse1I ACTGG 5 cut(s) 44, 143, 538, 561, 1219
Bse3DI GCAATG 2 cut(s) 215, 1193
Bse8I GATNNNNATC 1 cut(s) 1961
BseAI TCCGGA 1 cut(s) 568
BseBI CCWGG 3 cut(s) 533, 815, 1704
BseDI CCNNGG 4 cut(s) 126, 834, 1703, 1911
BseGI GGATG 5 cut(s) 844, 1011, 1252, 1506, 1824
BseJI GATNNNNATC 1 cut(s) 1961
BseLI CCNNNNNNNGG 6 cut(s) 532, 888, 1368, 1704, 2024, 2093
BseMI GCAATG 2 cut(s) 215, 1193
BseMII CTCAG 2 cut(s) 1257, 1443
BseNI ACTGG 5 cut(s) 44, 143, 538, 561, 1219
BseRI GAGGAG 6 cut(s) 458, 575, 1137, 1586, 1822, 2122
BseYI CCCAGC 1 cut(s) 1468
BsgI GTGCAG 1 cut(s) 223
BshFI GGCC 7 cut(s) 320, 636, 1307, 1467, 1670, 1725, 1784
BsiHKAI GWGCWC 3 cut(s) 24, 1272, 1649
BsiHKCI CYCGRG 1 cut(s) 807
BsiSI CCGG 3 cut(s) 375, 569, 2012
BslFI GGGAC 2 cut(s) 947, 2000
BslI CCNNNNNNNGG 6 cut(s) 532, 888, 1368, 1704, 2024, 2093
BsmAI GTCTC 2 cut(s) 804, 1989
BsmFI GGGAC 2 cut(s) 947, 2000
BsnI GGCC 7 cut(s) 320, 636, 1307, 1467, 1670, 1725, 1784
Bso31I GGTCTC 1 cut(s) 804
BsoBI CYCGRG 1 cut(s) 807
Bsp119I TTCGAA 1 cut(s) 2102
Bsp1286I GDGCHC 3 cut(s) 24, 1272, 1649
Bsp13I TCCGGA 1 cut(s) 568
Bsp1407I TGTACA 2 cut(s) 501, 918
Bsp143I GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
Bsp1720I GCTNAGC 1 cut(s) 1266
Bsp19I CCATGG 2 cut(s) 126, 1911
BspACI CCGC 4 cut(s) 1146, 1568, 1689, 1873
BspANI GGCC 7 cut(s) 320, 636, 1307, 1467, 1670, 1725, 1784
BspCNI CTCAG 2 cut(s) 1258, 1444
BspEI TCCGGA 1 cut(s) 568
BspHI TCATGA 1 cut(s) 1881
BspLI GGNNCC 2 cut(s) 330, 2016
BspMAI CTGCAG 2 cut(s) 427, 1423
BspMI ACCTGC 2 cut(s) 430, 1775
BspOI GCTAGC 1 cut(s) 731
BspPI GGATC 2 cut(s) 1324, 1566
BspQI GCTCTTC 2 cut(s) 1766, 1907
BspT104I TTCGAA 1 cut(s) 2102
BspTNI GGTCTC 1 cut(s) 804
BsrDI GCAATG 2 cut(s) 215, 1193
BsrGI TGTACA 2 cut(s) 501, 918
BsrI ACTGG 5 cut(s) 44, 143, 538, 561, 1219
BssECI CCNNGG 4 cut(s) 126, 834, 1703, 1911
BssMI GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
BssNI GRCGYC 1 cut(s) 1776
BssSI CACGAG 2 cut(s) 241, 359
BssT1I CCWWGG 3 cut(s) 126, 834, 1911
Bst2BI CACGAG 2 cut(s) 241, 359
Bst2UI CCWGG 3 cut(s) 533, 815, 1704
Bst4CI ACNGT 8 cut(s) 199, 1319, 1391, 1641, 1654, 1675, 1865, 1997
Bst6I CTCTTC 6 cut(s) 60, 146, 1757, 1766, 1907, 2099
BstACI GRCGYC 1 cut(s) 1776
BstAUI TGTACA 2 cut(s) 501, 918
BstBAI YACGTR 1 cut(s) 163
BstBI TTCGAA 1 cut(s) 2102
BstC8I GCNNGC 7 cut(s) 24, 729, 1485, 1792, 1877, 1929, 2030
BstDEI CTNAG 8 cut(s) 10, 400, 690, 1164, 1244, 1266, 1452, 1980
BstDSI CCRYGG 2 cut(s) 126, 1911
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 5 cut(s) 844, 1011, 1252, 1506, 1824
BstKTI GATC 7 cut(s) 121, 972, 1129, 1332, 1561, 1887, 2114
BstMAI GTCTC 2 cut(s) 804, 1989
BstMBI GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
BstMWI GCNNNNNNNGC 7 cut(s) 32, 243, 858, 861, 1597, 1694, 1937
BstNI CCWGG 3 cut(s) 533, 815, 1704
BstNSI RCATGY 1 cut(s) 998
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 3 cut(s) 531, 813, 1702
BstSFI CTRYAG 3 cut(s) 423, 1419, 1440
BstV2I GAAGAC 3 cut(s) 213, 1794, 1859
BstX2I RGATCY 2 cut(s) 969, 1329
BstYI RGATCY 2 cut(s) 969, 1329
BsuRI GGCC 7 cut(s) 320, 636, 1307, 1467, 1670, 1725, 1784
BtgI CCRYGG 2 cut(s) 126, 1911
BtgZI GCGATG 2 cut(s) 383, 1771
BtsCI GGATG 5 cut(s) 844, 1011, 1252, 1506, 1824
BtsI GCAGTG 2 cut(s) 210, 455
BtsIMutI CAGTG 6 cut(s) 204, 210, 455, 1095, 1212, 1396
BveI ACCTGC 2 cut(s) 430, 1775
Cac8I GCNNGC 7 cut(s) 24, 729, 1485, 1792, 1877, 1929, 2030
CciI TCATGA 1 cut(s) 1881
Cfr13I GGNCC 3 cut(s) 535, 1466, 2014
CsiI ACCWGGT 1 cut(s) 531
Csp6I GTAC 6 cut(s) 37, 101, 502, 673, 919, 1846
CspCI CAANNNNNGTGG 2 cut(s) 180, 215
CviQI GTAC 6 cut(s) 37, 101, 502, 673, 919, 1846
DdeI CTNAG 8 cut(s) 10, 400, 690, 1164, 1244, 1266, 1452, 1980
DpnI GATC 7 cut(s) 120, 971, 1128, 1331, 1560, 1886, 2113
DpnII GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
DraIII CACNNNGTG 1 cut(s) 364
DrdI GACNNNNNNGTC 1 cut(s) 818
DseDI GACNNNNNNGTC 1 cut(s) 818
EaeI YGGCCR 4 cut(s) 634, 1305, 1668, 1782
Eam1104I CTCTTC 6 cut(s) 60, 146, 1757, 1766, 1907, 2099
EarI CTCTTC 6 cut(s) 60, 146, 1757, 1766, 1907, 2099
Eco130I CCWWGG 3 cut(s) 126, 834, 1911
Eco31I GGTCTC 1 cut(s) 804
Eco47I GGWCC 2 cut(s) 535, 2014
Eco57I CTGAAG 3 cut(s) 921, 932, 1625
Eco88I CYCGRG 1 cut(s) 807
Eco91I GGTNACC 1 cut(s) 521
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 4 cut(s) 184, 272, 448, 1048
EcoRII CCWGG 3 cut(s) 531, 813, 1702
EcoT14I CCWWGG 3 cut(s) 126, 834, 1911
ErhI CCWWGG 3 cut(s) 126, 834, 1911
FalI AAGNNNNNCTT 2 cut(s) 42, 74
FaqI GGGAC 2 cut(s) 947, 2000
FauI CCCGC 1 cut(s) 1880
FokI GGATG 5 cut(s) 851, 998, 1239, 1513, 1811
FspBI CTAG 4 cut(s) 122, 435, 467, 728
GsaI CCCAGC 1 cut(s) 1472
GsuI CTGGAG 5 cut(s) 61, 404, 578, 836, 994
HaeIII GGCC 7 cut(s) 320, 636, 1307, 1467, 1670, 1725, 1784
HapII CCGG 3 cut(s) 375, 569, 2012
Hin1I GRCGYC 1 cut(s) 1776
HinfI GANTC 6 cut(s) 491, 565, 574, 1142, 1742, 1957
HpaII CCGG 3 cut(s) 375, 569, 2012
HphI GGTGA 5 cut(s) 515, 1121, 1737, 1756, 1885
Hpy166II GTNNAC 6 cut(s) 166, 202, 919, 921, 1286, 1893
Hpy188I TCNGA 7 cut(s) 477, 582, 912, 1453, 1563, 1605, 2052
Hpy188III TCNNGA 9 cut(s) 277, 359, 383, 569, 809, 973, 1027, 1882, 1966
Hpy8I GTNNAC 6 cut(s) 166, 202, 919, 921, 1286, 1893
Hpy99I CGWCG 2 cut(s) 1028, 1781
HpyAV CCTTC 9 cut(s) 137, 692, 728, 757, 809, 896, 907, 1736, 2086
HpyCH4III ACNGT 8 cut(s) 199, 1319, 1391, 1641, 1654, 1675, 1865, 1997
HpyCH4IV ACGT 4 cut(s) 162, 351, 1272, 1776
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 243, 858, 861, 1597, 1694, 1937
HpyF3I CTNAG 8 cut(s) 10, 400, 690, 1164, 1244, 1266, 1452, 1980
HpySE526I ACGT 4 cut(s) 162, 351, 1272, 1776
Hsp92I GRCGYC 1 cut(s) 1776
Kpn2I TCCGGA 1 cut(s) 568
Kzo9I GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
LguI GCTCTTC 2 cut(s) 1766, 1907
LmnI GCTCC 2 cut(s) 1428, 1573
LweI GCATC 4 cut(s) 302, 771, 1261, 1309
MabI ACCWGGT 1 cut(s) 531
MaeI CTAG 4 cut(s) 122, 435, 467, 728
MaeII ACGT 4 cut(s) 162, 351, 1272, 1776
MaeIII GTNAC 6 cut(s) 437, 521, 820, 1709, 1859, 2056
MalI GATC 7 cut(s) 120, 971, 1128, 1331, 1560, 1886, 2113
MboI GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
MfeI CAATTG 2 cut(s) 722, 1478
MflI RGATCY 2 cut(s) 969, 1329
MhlI GDGCHC 3 cut(s) 24, 1272, 1649
MlsI TGGCCA 4 cut(s) 636, 1307, 1670, 1784
MluNI TGGCCA 4 cut(s) 636, 1307, 1670, 1784
MmeI TCCRAC 1 cut(s) 1478
Mox20I TGGCCA 4 cut(s) 636, 1307, 1670, 1784
MroI TCCGGA 1 cut(s) 568
MroXI GAANNNNTTC 3 cut(s) 54, 906, 1141
MscI TGGCCA 4 cut(s) 636, 1307, 1670, 1784
MseI TTAA 6 cut(s) 60, 282, 990, 1002, 1311, 1460
MslI CAYNNNNRTG 4 cut(s) 597, 1618, 1642, 1769
Msp20I TGGCCA 4 cut(s) 636, 1307, 1670, 1784
MspA1I CMGCKG 2 cut(s) 1265, 1568
MspI CCGG 3 cut(s) 375, 569, 2012
MspR9I CCNGG 3 cut(s) 533, 815, 1704
MunI CAATTG 2 cut(s) 722, 1478
MvaI CCWGG 3 cut(s) 533, 815, 1704
MwoI GCNNNNNNNGC 7 cut(s) 32, 243, 858, 861, 1597, 1694, 1937
NcoI CCATGG 2 cut(s) 126, 1911
NdeII GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
NheI GCTAGC 1 cut(s) 727
NlaIV GGNNCC 2 cut(s) 330, 2016
NmeAIII GCCGAG 2 cut(s) 321, 2073
NmuCI GTSAC 3 cut(s) 521, 820, 1859
NspI RCATGY 1 cut(s) 998
NspV TTCGAA 1 cut(s) 2102
OliI CACNNNNGTG 1 cut(s) 1642
PaeR7I CTCGAG 1 cut(s) 807
PagI TCATGA 1 cut(s) 1881
PaqCI CACCTGC 1 cut(s) 1775
PciSI GCTCTTC 2 cut(s) 1766, 1907
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 357
PdmI GAANNNNTTC 3 cut(s) 54, 906, 1141
PfeI GAWTC 6 cut(s) 491, 565, 574, 1142, 1742, 1957
PflFI GACNNNGTC 2 cut(s) 533, 1981
PflMI CCANNNNNTGG 1 cut(s) 888
Ppu21I YACGTR 1 cut(s) 163
PshBI ATTAAT 2 cut(s) 282, 1460
PsiI TTATAA 1 cut(s) 1182
Psp1406I AACGTT 1 cut(s) 351
Psp6I CCWGG 3 cut(s) 531, 813, 1702
PspEI GGTNACC 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 1468
PspGI CCWGG 3 cut(s) 531, 813, 1702
PspN4I GGNNCC 2 cut(s) 330, 2016
PspPI GGNCC 3 cut(s) 535, 1466, 2014
PstI CTGCAG 2 cut(s) 427, 1423
PsuI RGATCY 2 cut(s) 969, 1329
PsyI GACNNNGTC 2 cut(s) 533, 1981
PvuII CAGCTG 1 cut(s) 1265
RsaI GTAC 6 cut(s) 38, 102, 503, 674, 920, 1847
RsaNI GTAC 6 cut(s) 37, 101, 502, 673, 919, 1846
RseI CAYNNNNRTG 4 cut(s) 597, 1618, 1642, 1769
SapI GCTCTTC 2 cut(s) 1766, 1907
SaqAI TTAA 6 cut(s) 60, 282, 990, 1002, 1311, 1460
Sau3AI GATC 7 cut(s) 118, 969, 1126, 1329, 1558, 1884, 2111
Sau96I GGNCC 3 cut(s) 535, 1466, 2014
SbfI CCTGCAGG 1 cut(s) 427
ScaI AGTACT 1 cut(s) 102
ScrFI CCNGG 3 cut(s) 533, 815, 1704
SdaI CCTGCAGG 1 cut(s) 427
SduI GDGCHC 3 cut(s) 24, 1272, 1649
SexAI ACCWGGT 1 cut(s) 531
SfaNI GCATC 4 cut(s) 302, 771, 1261, 1309
SfcI CTRYAG 3 cut(s) 423, 1419, 1440
Sfr274I CTCGAG 1 cut(s) 807
SfuI TTCGAA 1 cut(s) 2102
SinI GGWCC 2 cut(s) 535, 2014
SlaI CTCGAG 1 cut(s) 807
SmiMI CAYNNNNRTG 4 cut(s) 597, 1618, 1642, 1769
SmlI CTYRAG 5 cut(s) 807, 1257, 1334, 1366, 1841
SmoI CTYRAG 5 cut(s) 807, 1257, 1334, 1366, 1841
SpeI ACTAGT 1 cut(s) 434
Sse8387I CCTGCAGG 1 cut(s) 427
SsiI CCGC 4 cut(s) 1146, 1568, 1689, 1873
SspMI CTAG 4 cut(s) 122, 435, 467, 728
StyD4I CCNGG 3 cut(s) 531, 813, 1702
StyI CCWWGG 3 cut(s) 126, 834, 1911
TaaI ACNGT 8 cut(s) 199, 1319, 1391, 1641, 1654, 1675, 1865, 1997
TaiI ACGT 4 cut(s) 165, 354, 1275, 1779
TaqI TCGA 5 cut(s) 808, 963, 1026, 1965, 2102
TatI WGTACW 3 cut(s) 100, 501, 918
TauI GCSGC 1 cut(s) 1691
TfiI GAWTC 6 cut(s) 491, 565, 574, 1142, 1742, 1957
Tru1I TTAA 6 cut(s) 60, 282, 990, 1002, 1311, 1460
Tru9I TTAA 6 cut(s) 60, 282, 990, 1002, 1311, 1460
TscAI CASTG 6 cut(s) 204, 217, 462, 1095, 1219, 1396
TseFI GTSAC 3 cut(s) 521, 820, 1859
Tsp45I GTSAC 3 cut(s) 521, 820, 1859
TspDTI ATGAA 5 cut(s) 164, 321, 608, 1029, 2071
TspGWI ACGGA 1 cut(s) 62
TspRI CASTG 6 cut(s) 204, 217, 462, 1095, 1219, 1396
Tth111I GACNNNGTC 2 cut(s) 533, 1981
Van91I CCANNNNNTGG 1 cut(s) 888
VpaK11BI GGWCC 2 cut(s) 535, 2014
VspI ATTAAT 2 cut(s) 282, 1460
XapI RAATTY 4 cut(s) 184, 272, 448, 1048
XceI RCATGY 1 cut(s) 998
XcmI CCANNNNNNNNNTGG 1 cut(s) 841
XhoI CTCGAG 1 cut(s) 807
XmnI GAANNNNTTC 3 cut(s) 54, 906, 1141
XspI CTAG 4 cut(s) 122, 435, 467, 728
ZraI GACGTC 1 cut(s) 1777
ZrmI AGTACT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.