RLG00000030980

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
1137745 .. 1139873
2129 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030980

Sequence Viewer

Length: 1530 bp
ATGGAAGAAATACGTATTTCCGAACAATCCAAACCCCTCTTTCAAAGCCTCAGAGACGGTGATGTATTAGAAGTGGTGAAAGCTTATGCAAAAGCTACTACTCTTGATGCAAGATTAAAGCTAATTCCAACAGTGCACGACGACACAATCCTCCATTTGGCGATTTACATGGGGCAAGAAAGCATCGCAATAGGAATCATCGAAATAAGCAGGCATAATGACGAGCTAATTAAAAAACGCAATGCGTTTGGAAACACAGCTCTTCATGAGGCTGCAGCAGCTGATTTTGTACGAGTTGTGGAGAAGTTGTTGGAAAAGGCACCGGCATTGCTGTCCATTCCAAACAAGAAAGGGGAAATGCCTCTCTATACAGCAGCTCAATTTGGCCAGAAAAAAAATTTCATTTTGCTGGCTGAAAAACTAAAAAACAATCATTGTGATCTTCGTCCTCATTTCTGCTCCCTATCTCTTTCCTACGAGTCTGTTGAACACATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAGTTCTTTGAGCTTGCACTTTTGATAGCTAGAATGCCGGAGTATGCGAAGATTGTTCGACTAAAAGACAAAAATTTGAAGACGCCTCTTCAGCTCCTCTCATCCAATTCTTCAGCATTCGAGAGTGGAATGAAATGTGGACTGATCAAGAGGTTCATCCACAACTGTGCTCCATATGAAGATGCTAAAAAAGAAGATGCTCATGAACAAAATTCCAGTGATAATAGTCATGTTCAAAGTTCCAAAAGATCAGCTACTCTGTTTCTAAGGCGAGTCTTCTCTTCAGTTAATAGATCGGTTTGGATTGTTCTTCGAGCATGGAGTACGATGAGGAGCATCTACAACGAAAAGAGGAGGCATGGATTGGCTTTAGAACTAGCCACGTTTCTAATTGCAGCAGACTTTTCATGGGATGTCACACGACTAGCATTAAATAATGAAAGTATTATGCAGACTGCTGTGGGACTCCCATTCCCAGATTCCGAAGACTCAGGTGGTTCCAGTAACACTAGCACTGAAGACCTCTCGGCTCCATCCCTGGAAAAGAGTACTCCACCAGCTATCCCATTGCACATTGCAACAGAGCATGGAATATTAGAAATTGTGAAGGAGACTCTTAGAGTCCACCCTGCGGCATACGAGTATAGAAATACCAAGGGACAAAACATACTGCACCTGTCCATTATGCACCGTCAGCGGGACATCTTTGATCTTGTAATGAAGAAGGAGACACCTAAGTCGAGGTTGCAACGACAACTCGATATTAATGACTTCACAGTATTGCACCAAGTTGGCAACATAGAGCATTACAATGGAGGTACCCAGCCTGGTCCTGCACTCCAATTGCAGGAAGAGCTGGAGTGGTTCGAGAAGGTGGAGGGGTTAATCCCACTACATTATGAAAAATTCAGTGCTTGTGAGACAGGCAAAGACACCACCCTACAGTCCTTTCATAAAAGATATGTAGAGATTCTCAAGGACTTGTCTGAGTGGATAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

510

Amino Acids

57.71

Weight (kDa)

6.9

Isoelectric Point (pI)

54.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 78 - 140 5.1e-06 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000724)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1264
Acc65I GGTACC 1 cut(s) 1346
AccB1I GGYRCC 2 cut(s) 319, 1346
AciI CCGC 2 cut(s) 1160, 1225
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 4 cut(s) 397, 601, 739, 1433
AcuI CTGAAG 4 cut(s) 602, 624, 795, 1065
AcyI GRCGYC 1 cut(s) 611
AfaI GTAC 5 cut(s) 291, 502, 853, 1078, 1348
AfiI CCNNNNNNNGG 4 cut(s) 157, 1159, 1225, 1375
AgsI TTSAA 4 cut(s) 44, 488, 607, 764
AjnI CCWGG 2 cut(s) 1065, 1354
AleI CACNNNNGTG 1 cut(s) 693
Alw21I GWGCWC 2 cut(s) 138, 700
Alw26I GTCTC 4 cut(s) 48, 1133, 1250, 1442
Alw44I GTGCAC 1 cut(s) 134
AlwNI CAGNNNCTG 1 cut(s) 281
AoxI GGCC 1 cut(s) 385
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 6 cut(s) 272, 275, 278, 374, 515, 923
ApoI RAATTY 4 cut(s) 397, 601, 739, 1433
AseI ATTAAT 1 cut(s) 1293
Asp718I GGTACC 1 cut(s) 1346
AspS9I GGNCC 1 cut(s) 1358
AsuHPI GGTGA 2 cut(s) 71, 88
AvaII GGWCC 1 cut(s) 1358
BaeGI GKGCMC 1 cut(s) 138
BalI TGGCCA 1 cut(s) 387
BanI GGYRCC 2 cut(s) 319, 1346
BbsI GAAGAC 4 cut(s) 614, 796, 1020, 1053
Bbv12I GWGCWC 2 cut(s) 138, 700
BbvI GCAGC 6 cut(s) 259, 287, 290, 386, 502, 935
BccI CCATC 1 cut(s) 1069
BciT130I CCWGG 2 cut(s) 1067, 1356
BclI TGATCA 1 cut(s) 672
BcoDI GTCTC 4 cut(s) 48, 1133, 1250, 1442
BfaI CTAG 4 cut(s) 558, 905, 953, 1038
BfmI CTRYAG 2 cut(s) 273, 1469
BisI GCNGC 7 cut(s) 273, 276, 279, 375, 516, 924, 1161
BlsI GCNGC 7 cut(s) 274, 277, 280, 376, 517, 925, 1162
BmcAI AGTACT 1 cut(s) 1078
Bme1390I CCNGG 2 cut(s) 1067, 1356
Bme18I GGWCC 1 cut(s) 1358
BmgT120I GGNCC 1 cut(s) 1358
BmiI GGNNCC 4 cut(s) 321, 1027, 1059, 1348
BmrFI CCNGG 2 cut(s) 1067, 1356
BmsI GCATC 5 cut(s) 97, 192, 700, 715, 873
BpiI GAAGAC 4 cut(s) 614, 796, 1020, 1053
BpmI CTGGAG 1 cut(s) 1406
BpuEI CTTGAG 1 cut(s) 1487
BsaAI YACGTR 1 cut(s) 14
BsaHI GRCGYC 1 cut(s) 611
BsaJI CCNNGG 2 cut(s) 1065, 1182
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 1159, 1225, 1375
Bse118I RCCGGY 1 cut(s) 322
Bse1I ACTGG 2 cut(s) 744, 1029
Bse3DI GCAATG 4 cut(s) 247, 326, 1094, 1101
BseBI CCWGG 2 cut(s) 1067, 1356
BseDI CCNNGG 2 cut(s) 1065, 1182
BseGI GGATG 4 cut(s) 629, 684, 946, 1061
BseLI CCNNNNNNNGG 4 cut(s) 157, 1159, 1225, 1375
BseMI GCAATG 4 cut(s) 247, 326, 1094, 1101
BseMII CTCAG 3 cut(s) 64, 1032, 1506
BseNI ACTGG 2 cut(s) 744, 1029
BseRI GAGGAG 3 cut(s) 614, 874, 895
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 6 cut(s) 259, 287, 290, 386, 502, 935
BseYI CCCAGC 1 cut(s) 1350
BsgI GTGCAG 2 cut(s) 1184, 1347
BshFI GGCC 1 cut(s) 387
BshNI GGYRCC 2 cut(s) 319, 1346
BsiHKAI GWGCWC 2 cut(s) 138, 700
BsiSI CCGG 2 cut(s) 323, 566
BslFI GGGAC 3 cut(s) 1005, 1200, 1241
BslI CCNNNNNNNGG 4 cut(s) 157, 1159, 1225, 1375
BsmAI GTCTC 4 cut(s) 48, 1133, 1250, 1442
BsmBI CGTCTC 1 cut(s) 48
BsmFI GGGAC 3 cut(s) 1005, 1200, 1241
BsmI GAATGC 2 cut(s) 567, 644
BsnI GGCC 1 cut(s) 387
Bsp1286I GDGCHC 2 cut(s) 138, 700
Bsp143I GATC 5 cut(s) 439, 672, 776, 821, 1237
BspACI CCGC 2 cut(s) 1160, 1225
BspANI GGCC 1 cut(s) 387
BspCNI CTCAG 3 cut(s) 63, 1031, 1507
BspHI TCATGA 2 cut(s) 265, 730
BspLI GGNNCC 4 cut(s) 321, 1027, 1059, 1348
BspMAI CTGCAG 1 cut(s) 277
BspQI GCTCTTC 2 cut(s) 267, 1374
BspT107I GGYRCC 2 cut(s) 319, 1346
BsrDI GCAATG 4 cut(s) 247, 326, 1094, 1101
BsrFI RCCGGY 1 cut(s) 322
BsrI ACTGG 2 cut(s) 744, 1029
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 2 cut(s) 1065, 1182
BssMI GATC 5 cut(s) 439, 672, 776, 821, 1237
BssNI GRCGYC 1 cut(s) 611
BssT1I CCWWGG 1 cut(s) 1182
Bst2UI CCWGG 2 cut(s) 1067, 1356
Bst4CI ACNGT 6 cut(s) 59, 133, 695, 1220, 1306, 1473
Bst6I CTCTTC 4 cut(s) 267, 621, 814, 1374
BstACI GRCGYC 1 cut(s) 611
BstAPI GCANNNNNTGC 1 cut(s) 524
BstBAI YACGTR 1 cut(s) 14
BstC8I GCNNGC 3 cut(s) 212, 411, 543
BstDEI CTNAG 6 cut(s) 50, 794, 1018, 1145, 1263, 1515
BstF5I GGATG 4 cut(s) 629, 684, 946, 1061
BstKTI GATC 5 cut(s) 442, 675, 779, 824, 1240
BstMAI GTCTC 4 cut(s) 48, 1133, 1250, 1442
BstMBI GATC 5 cut(s) 439, 672, 776, 821, 1237
BstMWI GCNNNNNNNGC 5 cut(s) 278, 524, 619, 1222, 1381
BstNI CCWGG 2 cut(s) 1067, 1356
BstNSI RCATGY 1 cut(s) 527
BstSCI CCNGG 2 cut(s) 1065, 1354
BstSFI CTRYAG 2 cut(s) 273, 1469
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 14
BstV1I GCAGC 6 cut(s) 259, 287, 290, 386, 502, 935
BstV2I GAAGAC 4 cut(s) 614, 796, 1020, 1053
BsuRI GGCC 1 cut(s) 387
BtgZI GCGATG 1 cut(s) 169
BtsCI GGATG 4 cut(s) 629, 684, 946, 1061
BtsIMutI CAGTG 4 cut(s) 138, 751, 1041, 1444
Cac8I GCNNGC 3 cut(s) 212, 411, 543
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 2 cut(s) 265, 730
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 1 cut(s) 1358
CseI GACGC 1 cut(s) 619
Csp6I GTAC 5 cut(s) 290, 501, 852, 1077, 1347
CviQI GTAC 5 cut(s) 290, 501, 852, 1077, 1347
DdeI CTNAG 6 cut(s) 50, 794, 1018, 1145, 1263, 1515
DpnI GATC 5 cut(s) 441, 674, 778, 823, 1239
DpnII GATC 5 cut(s) 439, 672, 776, 821, 1237
DrdI GACNNNNNNGTC 1 cut(s) 1264
DseDI GACNNNNNNGTC 1 cut(s) 1264
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 4 cut(s) 267, 621, 814, 1374
EarI CTCTTC 4 cut(s) 267, 621, 814, 1374
Eco105I TACGTA 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 1182
Eco47I GGWCC 1 cut(s) 1358
Eco57I CTGAAG 4 cut(s) 602, 624, 795, 1065
EcoRII CCWGG 2 cut(s) 1065, 1354
EcoT14I CCWWGG 1 cut(s) 1182
ErhI CCWWGG 1 cut(s) 1182
Esp3I CGTCTC 1 cut(s) 48
FaqI GGGAC 3 cut(s) 1005, 1200, 1241
FauI CCCGC 1 cut(s) 1218
FauNDI CATATG 1 cut(s) 703
FbaI TGATCA 1 cut(s) 672
Fnu4HI GCNGC 7 cut(s) 273, 276, 279, 375, 516, 924, 1161
FokI GGATG 4 cut(s) 616, 671, 953, 1048
Fsp4HI GCNGC 7 cut(s) 273, 276, 279, 375, 516, 924, 1161
FspBI CTAG 4 cut(s) 558, 905, 953, 1038
GluI GCNGC 7 cut(s) 273, 276, 279, 375, 516, 924, 1161
GsaI CCCAGC 1 cut(s) 1354
GsuI CTGGAG 1 cut(s) 1406
HaeIII GGCC 1 cut(s) 387
HapII CCGG 2 cut(s) 323, 566
HgaI GACGC 1 cut(s) 619
Hin1I GRCGYC 1 cut(s) 611
HindIII AAGCTT 1 cut(s) 81
HinfI GANTC 9 cut(s) 195, 479, 801, 993, 1007, 1016, 1141, 1149, 1498
HpaII CCGG 2 cut(s) 323, 566
HphI GGTGA 2 cut(s) 71, 88
Hpy166II GTNNAC 3 cut(s) 136, 668, 1153
Hpy188I TCNGA 4 cut(s) 22, 53, 1012, 1516
Hpy188III TCNNGA 6 cut(s) 104, 266, 649, 676, 731, 1396
Hpy8I GTNNAC 3 cut(s) 136, 668, 1153
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 3 cut(s) 1129, 1246, 1393
HpyCH4III ACNGT 6 cut(s) 59, 133, 695, 1220, 1306, 1473
HpyCH4IV ACGT 2 cut(s) 13, 911
HpyF10VI GCNNNNNNNGC 5 cut(s) 278, 524, 619, 1222, 1381
HpyF3I CTNAG 6 cut(s) 50, 794, 1018, 1145, 1263, 1515
HpySE526I ACGT 2 cut(s) 13, 911
Hsp92I GRCGYC 1 cut(s) 611
KpnI GGTACC 1 cut(s) 1350
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 5 cut(s) 439, 672, 776, 821, 1237
LguI GCTCTTC 2 cut(s) 267, 1374
LmnI GCTCC 5 cut(s) 464, 627, 703, 861, 1063
Lsp1109I GCAGC 6 cut(s) 259, 287, 290, 386, 502, 935
LweI GCATC 5 cut(s) 97, 192, 700, 715, 873
MaeI CTAG 4 cut(s) 558, 905, 953, 1038
MaeII ACGT 2 cut(s) 13, 911
MaeIII GTNAC 2 cut(s) 943, 1031
MalI GATC 5 cut(s) 441, 674, 778, 823, 1239
MboI GATC 5 cut(s) 439, 672, 776, 821, 1237
MfeI CAATTG 1 cut(s) 1370
MhlI GDGCHC 2 cut(s) 138, 700
MlsI TGGCCA 1 cut(s) 387
MluNI TGGCCA 1 cut(s) 387
MlyI GAGTC 6 cut(s) 488, 810, 987, 1010, 1135, 1158
MmeI TCCRAC 2 cut(s) 152, 291
Mox20I TGGCCA 1 cut(s) 387
MscI TGGCCA 1 cut(s) 387
MseI TTAA 6 cut(s) 116, 231, 816, 959, 1293, 1412
MslI CAYNNNNRTG 2 cut(s) 693, 1338
Msp20I TGGCCA 1 cut(s) 387
MspA1I CMGCKG 2 cut(s) 281, 1225
MspI CCGG 2 cut(s) 323, 566
MspR9I CCNGG 2 cut(s) 1067, 1356
MunI CAATTG 1 cut(s) 1370
Mva1269I GAATGC 2 cut(s) 567, 644
MvaI CCWGG 2 cut(s) 1067, 1356
MwoI GCNNNNNNNGC 5 cut(s) 278, 524, 619, 1222, 1381
NdeI CATATG 1 cut(s) 703
NdeII GATC 5 cut(s) 439, 672, 776, 821, 1237
NlaIV GGNNCC 4 cut(s) 321, 1027, 1059, 1348
NmeAIII GCCGAG 2 cut(s) 553, 1034
NmuCI GTSAC 1 cut(s) 943
NspI RCATGY 1 cut(s) 527
OliI CACNNNNGTG 1 cut(s) 693
PagI TCATGA 2 cut(s) 265, 730
PciSI GCTCTTC 2 cut(s) 267, 1374
PctI GAATGC 2 cut(s) 567, 644
PfeI GAWTC 3 cut(s) 195, 1007, 1498
PkrI GCNGC 7 cut(s) 274, 277, 280, 376, 517, 925, 1162
PleI GAGTC 6 cut(s) 487, 809, 987, 1010, 1135, 1157
PpsI GAGTC 6 cut(s) 487, 809, 987, 1010, 1135, 1157
Ppu21I YACGTR 1 cut(s) 14
PshBI ATTAAT 1 cut(s) 1293
Psp6I CCWGG 2 cut(s) 1065, 1354
PspFI CCCAGC 1 cut(s) 1350
PspGI CCWGG 2 cut(s) 1065, 1354
PspN4I GGNNCC 4 cut(s) 321, 1027, 1059, 1348
PspPI GGNCC 1 cut(s) 1358
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 281
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 5 cut(s) 291, 502, 853, 1078, 1348
RsaNI GTAC 5 cut(s) 290, 501, 852, 1077, 1347
RseI CAYNNNNRTG 2 cut(s) 693, 1338
SapI GCTCTTC 2 cut(s) 267, 1374
SaqAI TTAA 6 cut(s) 116, 231, 816, 959, 1293, 1412
SatI GCNGC 7 cut(s) 273, 276, 279, 375, 516, 924, 1161
Sau3AI GATC 5 cut(s) 439, 672, 776, 821, 1237
Sau96I GGNCC 1 cut(s) 1358
ScaI AGTACT 1 cut(s) 1078
SchI GAGTC 6 cut(s) 488, 810, 987, 1010, 1135, 1158
ScrFI CCNGG 2 cut(s) 1067, 1356
SduI GDGCHC 2 cut(s) 138, 700
SfaNI GCATC 5 cut(s) 97, 192, 700, 715, 873
SfcI CTRYAG 2 cut(s) 273, 1469
SinI GGWCC 1 cut(s) 1358
SmiMI CAYNNNNRTG 2 cut(s) 693, 1338
SmlI CTYRAG 1 cut(s) 1502
SmoI CTYRAG 1 cut(s) 1502
SnaBI TACGTA 1 cut(s) 14
SsiI CCGC 2 cut(s) 1160, 1225
SspI AATATT 1 cut(s) 1122
SspMI CTAG 4 cut(s) 558, 905, 953, 1038
StyD4I CCNGG 2 cut(s) 1065, 1354
StyI CCWWGG 1 cut(s) 1182
TaaI ACNGT 6 cut(s) 59, 133, 695, 1220, 1306, 1473
TaiI ACGT 2 cut(s) 16, 914
TaqI TCGA 7 cut(s) 201, 586, 648, 841, 1268, 1287, 1395
TatI WGTACW 1 cut(s) 1076
TauI GCSGC 1 cut(s) 1163
TfiI GAWTC 3 cut(s) 195, 1007, 1498
Tru1I TTAA 6 cut(s) 116, 231, 816, 959, 1293, 1412
Tru9I TTAA 6 cut(s) 116, 231, 816, 959, 1293, 1412
TscAI CASTG 4 cut(s) 138, 751, 1048, 1444
TseFI GTSAC 1 cut(s) 943
TseI GCWGC 6 cut(s) 272, 275, 278, 374, 515, 923
Tsp45I GTSAC 1 cut(s) 943
TspRI CASTG 4 cut(s) 138, 751, 1048, 1444
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 1 cut(s) 1358
VspI ATTAAT 1 cut(s) 1293
XapI RAATTY 4 cut(s) 397, 601, 739, 1433
XceI RCATGY 1 cut(s) 527
XspI CTAG 4 cut(s) 558, 905, 953, 1038
ZrmI AGTACT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.