Prupe.8G029400_v2.0.a1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000724
Physical Location & Seq
Reverse (-)
2701897 .. 2705652
3756 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G029400.1

Sequence Viewer

Length: 2115 bp
ATGGAGGATACGGAGGAGATGGAGGAGATGGAGGATATAGGAAAGGCACTGCGTCAGATCCAAGAGCCATATAAATGGGTCATGCACGGCAAATGGGAACCCCTAAAAGAATTCTACAAGAATCACCCAGCTGAAGTAGTTCAGCAATTGACAACGAACAACGACACTGTACTACATGTCGTAGCCGTTGCCGGACGCAGCGACGTGCTTGAGTTTTTGATTGATCTAATAGAAGACCCTGAGGATGAACTTTATGCGTTTAAAGTCGGGAACAACTATGGCAATACCATTCTGCATGAGGTGGCTGTGTCCGGAAATCCGGAGGCAGCAAAAAAGATCTTGATGAGCGAGAAGAACAAAGTCAAGGATGATAGCCATATAAGTATCCTAAGGATTCAGAACAGATTAGGAGAGACCCCACTCTACAGGGCTGCTGCTTTCGGTCACACAAAGTTGGTCAAATATTTGAAAAAAGAAGTGAAGCGGCAGCAGCAGCAGGATATAGAGCACCAGCAGCAGGATATAGAGCAGCAGCGGCTGCATATAGAGCAGCAGCAGCAGGATATAGAGCAGCAGCAGCAGCAGGATATAGAGCAGCAGCAGCAGCAGGATATAAAGAAGCAGCAGCAGGAGAAGGCTATGGAGTACCACTTCAACAGAAAACATGATAACATGTCCATTCTTCAGATCGCAGTCATTAGCCAACATTTTGAGACTGCTTTTTGGTTACTAAAAAGGTACCCAAATCTTGCGAATAGAAAGGAAAGAAATGGACTCACATGTCTTCAATTGCTAGCCCAAATGCCATATGCCTTCGAAGCCAAATTTCGCAAAAGCATATGGAAGATGCTCATTTATAAATGGATTTACCCTTCTACTGAGCACTTGGAGAGCACGATCAATCAGCCTTCCCAGTCTGGTTGTTCACAGAATATTACAAGATGGCGACCAATCCGTGATATATTCAATGAAATCAAAAATCAAAAATTTCTATCGAAACTCACTCGTTCGCTGGTGAAGGAGGACTATTCATGGTCGGCAAATGCAACACCCAATTTCAACACATTTACTCTGGTATGTCCCAAGAAATCGGATGATTCTCCACAAAAAACCTCTGAATCTACCCTTAAGCATGCCCCGTTGCTTATAGCAACATGCACGGGAATATCAAAAATTGTGAAAAAAATTTTGGATTCTGACCCTCAAGCGGTGGAAATGTTGGATCCTGCAACTCAACAAAACATTTTGCACATGGCCATTAAGTATCGCCGGAAGGCCATCCTTCACATGGTACAAAAGGACAAATCGATAACGTCAAGGTTGGCTGACAGGATTGATATTAATGGGGACACCATATTGCACCACGCTGCATATGTGATTTCTTACCCTGTAGACGCTCAAGGCTCAATTGGTCCTGCATTTCAATTGCAAAAAGAATTGCGTTGGATGGCGCGTGTGGAAAAGATAATGCCATGTCATTACGCCATGCACCAGAACAATCAGGGCCTGACAGCGCAGAAGCTCTTCGAGAAAGGGCATGCAGATCTTCTTAATTCGGCAAAAACATGGATAAAAGAGACAGCTCAGTCGTGCTCGACCGTGGCAGCTTTGGTGGCTACAGTGGCCTATGCAGCTGCCTTTACGGCTCCCGGGGGTACTGATAACTACGGGGTTCCTGTTCTCAGGCATTCTATTTTCTTTGTCACATTCGCCGTTTCGGACATTATCTCGCTCATCTTATCATTGACTTCTTTGTGCACGTTTCTCTCTATCCTGACGTCCCCGTTTGAGTACAAAAACTTTCACCGTTCTCTTCCCTTCAGGCTGCATTTAGGATTCGCGCTTCTCTTCTTCTCGTTGGTAGCCACCATGCTCACCTTCACTGCTGCTGTTGTGCTCTTGATTCATCATCAAAAGATGTGGACAACGTCCCTCATTTATGTGGTTGCCCTTCTTCCTGTCTCTGTGTTTGGGCTCTCGCAATTTCCTTTGTATGGCGGATTTCTCCAATGTGTGAAATACATTTCAAAAAAAACTCTCCAATGTGTGAAATACATTTCAAAAAAAACTGGGGAGACTATAAATCAACTTCACTTCCAAGGAAATGGACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

705

Amino Acids

80.77

Weight (kDa)

8.86

Isoelectric Point (pI)

55.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 858
AasI GACNNNNNNGTC 2 cut(s) 780, 1585
AatII GACGTC 1 cut(s) 1781
Acc65I GGTACC 1 cut(s) 738
AccB1I GGYRCC 1 cut(s) 738
AccI GTMKAC 1 cut(s) 1392
AccII CGCG 2 cut(s) 1453, 1841
AccIII TCCGGA 2 cut(s) 311, 319
AciI CCGC 4 cut(s) 484, 535, 1208, 1998
AclWI GGATC 3 cut(s) 52, 1217, 1230
AcoI YGGCCR 1 cut(s) 1254
AcsI RAATTY 4 cut(s) 110, 824, 986, 1185
AcuI CTGAAG 3 cut(s) 153, 668, 1804
AcyI GRCGYC 1 cut(s) 1778
AfaI GTAC 6 cut(s) 171, 647, 740, 1293, 1657, 1793
AfiI CCNNNNNNNGG 4 cut(s) 517, 1207, 1288, 1994
AflII CTTAAG 1 cut(s) 1127
AflIII ACRYGT 3 cut(s) 175, 672, 779
AgsI TTSAA 8 cut(s) 469, 655, 788, 967, 1060, 1424, 2028, 2061
AjiI CACGTC 1 cut(s) 205
AjuI GAANNNNNNNTTGG 2 cut(s) 1172, 1204
AluBI AGCT 5 cut(s) 131, 1522, 1583, 1607, 1634
AluI AGCT 5 cut(s) 131, 1522, 1583, 1607, 1634
Alw21I GWGCWC 6 cut(s) 510, 885, 896, 1595, 1760, 1899
Alw26I GTCTC 5 cut(s) 407, 707, 1571, 1966, 2069
Alw44I GTGCAC 1 cut(s) 1756
AlwI GGATC 3 cut(s) 52, 1217, 1230
AlwNI CAGNNNCTG 2 cut(s) 538, 1507
Ama87I CYCGRG 1 cut(s) 1649
Aor13HI TCCGGA 2 cut(s) 311, 319
AoxI GGCC 4 cut(s) 1254, 1275, 1504, 1623
ApaLI GTGCAC 1 cut(s) 1756
ApoI RAATTY 4 cut(s) 110, 824, 986, 1185
AseI ATTAAT 1 cut(s) 1341
Asp700I GAANNNNTTC 2 cut(s) 138, 1523
Asp718I GGTACC 1 cut(s) 738
AspLEI GCGC 3 cut(s) 1453, 1516, 1843
AspS9I GGNCC 2 cut(s) 1412, 1504
AsuC2I CCSGG 2 cut(s) 1650, 1651
AsuHPI GGTGA 4 cut(s) 116, 1027, 1796, 1867
AsuII TTCGAA 1 cut(s) 816
AsuNHI GCTAGC 1 cut(s) 793
AvaI CYCGRG 1 cut(s) 1649
AvaII GGWCC 1 cut(s) 1412
AxyI CCTNAGG 2 cut(s) 240, 389
BaeGI GKGCMC 1 cut(s) 1760
BalI TGGCCA 1 cut(s) 1256
BamHI GGATCC 1 cut(s) 1222
BanI GGYRCC 1 cut(s) 738
BanII GRGCYC 1 cut(s) 1977
BbsI GAAGAC 2 cut(s) 240, 776
Bbv12I GWGCWC 6 cut(s) 510, 885, 896, 1595, 1760, 1899
BccI CCATC 5 cut(s) 13, 22, 936, 1286, 1441
BceAI ACGGC 4 cut(s) 103, 170, 1659, 1697
BciVI GTATCC 1 cut(s) 395
BcnI CCSGG 2 cut(s) 1650, 1651
BcoDI GTCTC 5 cut(s) 407, 707, 1571, 1966, 2069
BfaI CTAG 1 cut(s) 794
BfmI CTRYAG 3 cut(s) 424, 1389, 1617
BfrI CTTAAG 1 cut(s) 1127
BfuI GTATCC 1 cut(s) 395
BglI GCCNNNNNGGC 1 cut(s) 1643
BglII AGATCT 2 cut(s) 336, 1543
Bme1390I CCNGG 2 cut(s) 1650, 1651
Bme18I GGWCC 1 cut(s) 1412
BmeT110I CYCGRG 1 cut(s) 1649
BmgBI CACGTC 1 cut(s) 205
BmgT120I GGNCC 2 cut(s) 1412, 1504
BmiI GGNNCC 5 cut(s) 99, 740, 1224, 1647, 1674
BmrFI CCNGG 2 cut(s) 1650, 1651
BmrI ACTGGG 2 cut(s) 907, 2079
BmsI GCATC 1 cut(s) 837
BmtI GCTAGC 1 cut(s) 797
BmuI ACTGGG 2 cut(s) 907, 2079
BpiI GAAGAC 2 cut(s) 240, 776
Bpu14I TTCGAA 1 cut(s) 816
BpuEI CTTGAG 3 cut(s) 230, 1188, 1383
BpuMI CCSGG 2 cut(s) 1650, 1651
Bsa29I ATCGAT 1 cut(s) 1307
BsaHI GRCGYC 1 cut(s) 1778
BsaI GGTCTC 1 cut(s) 407
BsaJI CCNNGG 4 cut(s) 1599, 1649, 1650, 2098
BsaWI WCCGGW 2 cut(s) 311, 319
Bsc4I CCNNNNNNNGG 4 cut(s) 517, 1207, 1288, 1994
Bse1I ACTGG 2 cut(s) 913, 2074
Bse21I CCTNAGG 2 cut(s) 240, 389
BseAI TCCGGA 2 cut(s) 311, 319
BseCI ATCGAT 1 cut(s) 1307
BseDI CCNNGG 4 cut(s) 1599, 1649, 1650, 2098
BseGI GGATG 5 cut(s) 250, 373, 1099, 1278, 1452
BseLI CCNNNNNNNGG 4 cut(s) 517, 1207, 1288, 1994
BseMII CTCAG 4 cut(s) 231, 870, 1598, 1696
BseNI ACTGG 2 cut(s) 913, 2074
BseRI GAGGAG 2 cut(s) 29, 38
BseSI GKGCMC 1 cut(s) 1760
BseYI CCCAGC 1 cut(s) 127
Bsh1236I CGCG 2 cut(s) 1453, 1841
Bsh1285I CGRYCG 1 cut(s) 1599
BshFI GGCC 4 cut(s) 1256, 1277, 1506, 1625
BshNI GGYRCC 1 cut(s) 738
BshVI ATCGAT 1 cut(s) 1307
BsiEI CGRYCG 1 cut(s) 1599
BsiHKAI GWGCWC 6 cut(s) 510, 885, 896, 1595, 1760, 1899
BsiHKCI CYCGRG 1 cut(s) 1649
BsiSI CCGG 5 cut(s) 192, 312, 320, 1270, 1650
BslFI GGGAC 4 cut(s) 1065, 1361, 1765, 1915
BslI CCNNNNNNNGG 4 cut(s) 517, 1207, 1288, 1994
BsmAI GTCTC 5 cut(s) 407, 707, 1571, 1966, 2069
BsmFI GGGAC 4 cut(s) 1065, 1361, 1765, 1915
BsmI GAATGC 1 cut(s) 1687
BsnI GGCC 4 cut(s) 1256, 1277, 1506, 1625
Bso31I GGTCTC 1 cut(s) 407
BsoBI CYCGRG 1 cut(s) 1649
Bsp119I TTCGAA 1 cut(s) 816
Bsp1286I GDGCHC 7 cut(s) 510, 885, 896, 1595, 1760, 1899, 1977
Bsp13I TCCGGA 2 cut(s) 311, 319
Bsp143I GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
BspACI CCGC 4 cut(s) 484, 535, 1208, 1998
BspANI GGCC 4 cut(s) 1256, 1277, 1506, 1625
BspCNI CTCAG 4 cut(s) 232, 871, 1597, 1695
BspDI ATCGAT 1 cut(s) 1307
BspEI TCCGGA 2 cut(s) 311, 319
BspFNI CGCG 2 cut(s) 1453, 1841
BspLI GGNNCC 5 cut(s) 99, 740, 1224, 1647, 1674
BspOI GCTAGC 1 cut(s) 797
BspPI GGATC 3 cut(s) 52, 1217, 1230
BspQI GCTCTTC 1 cut(s) 1529
BspT104I TTCGAA 1 cut(s) 816
BspT107I GGYRCC 1 cut(s) 738
BspTI CTTAAG 1 cut(s) 1127
BspTNI GGTCTC 1 cut(s) 407
BsrI ACTGG 2 cut(s) 913, 2074
BssECI CCNNGG 4 cut(s) 1599, 1649, 1650, 2098
BssMI GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
BssNI GRCGYC 1 cut(s) 1778
BssT1I CCWWGG 1 cut(s) 2098
Bst4CI ACNGT 4 cut(s) 169, 1600, 1621, 1808
Bst6I CTCTTC 3 cut(s) 1529, 1818, 1853
BstACI GRCGYC 1 cut(s) 1778
BstAFI CTTAAG 1 cut(s) 1127
BstAPI GCANNNNNTGC 1 cut(s) 538
BstBI TTCGAA 1 cut(s) 816
BstC8I GCNNGC 3 cut(s) 795, 1134, 1539
BstDEI CTNAG 5 cut(s) 240, 389, 879, 1584, 1682
BstDSI CCRYGG 1 cut(s) 1599
BstF5I GGATG 5 cut(s) 250, 373, 1099, 1278, 1452
BstFNI CGCG 2 cut(s) 1453, 1841
BstHHI GCGC 3 cut(s) 1453, 1516, 1843
BstKTI GATC 7 cut(s) 60, 226, 339, 690, 900, 1225, 1546
BstMAI GTCTC 5 cut(s) 407, 707, 1571, 1966, 2069
BstMBI GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
BstMCI CGRYCG 1 cut(s) 1599
BstNSI RCATGY 6 cut(s) 179, 676, 783, 1136, 1158, 1541
BstSCI CCNGG 2 cut(s) 1648, 1649
BstSFI CTRYAG 3 cut(s) 424, 1389, 1617
BstSLI GKGCMC 1 cut(s) 1760
BstUI CGCG 2 cut(s) 1453, 1841
BstV2I GAAGAC 2 cut(s) 240, 776
BstX2I RGATCY 4 cut(s) 57, 336, 1222, 1543
BstXI CCANNNNNNTGG 2 cut(s) 75, 2105
BstYI RGATCY 4 cut(s) 57, 336, 1222, 1543
Bsu15I ATCGAT 1 cut(s) 1307
Bsu36I CCTNAGG 2 cut(s) 240, 389
BsuI GTATCC 1 cut(s) 395
BsuRI GGCC 4 cut(s) 1256, 1277, 1506, 1625
BsuTUI ATCGAT 1 cut(s) 1307
BtgI CCRYGG 1 cut(s) 1599
BtrI CACGTC 1 cut(s) 205
BtsCI GGATG 5 cut(s) 250, 373, 1099, 1278, 1452
BtsI GCAGTG 2 cut(s) 47, 1881
BtsIMutI CAGTG 4 cut(s) 47, 165, 1626, 1881
Cac8I GCNNGC 3 cut(s) 795, 1134, 1539
CaiI CAGNNNCTG 2 cut(s) 538, 1507
CfoI GCGC 3 cut(s) 1453, 1516, 1843
Cfr13I GGNCC 2 cut(s) 1412, 1504
Cfr9I CCCGGG 1 cut(s) 1649
ClaI ATCGAT 1 cut(s) 1307
CseI GACGC 3 cut(s) 41, 204, 1403
Csp6I GTAC 6 cut(s) 170, 646, 739, 1292, 1656, 1792
CspCI CAANNNNNGTGG 2 cut(s) 1901, 1936
CviQI GTAC 6 cut(s) 170, 646, 739, 1292, 1656, 1792
DdeI CTNAG 5 cut(s) 240, 389, 879, 1584, 1682
DpnI GATC 7 cut(s) 59, 225, 338, 689, 899, 1224, 1545
DpnII GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
DraI TTTAAA 1 cut(s) 262
DrdI GACNNNNNNGTC 2 cut(s) 780, 1585
DseDI GACNNNNNNGTC 2 cut(s) 780, 1585
EaeI YGGCCR 1 cut(s) 1254
Eam1104I CTCTTC 3 cut(s) 1529, 1818, 1853
EarI CTCTTC 3 cut(s) 1529, 1818, 1853
EciI GGCGGA 1 cut(s) 2013
Eco130I CCWWGG 1 cut(s) 2098
Eco24I GRGCYC 1 cut(s) 1977
Eco31I GGTCTC 1 cut(s) 407
Eco47I GGWCC 1 cut(s) 1412
Eco57I CTGAAG 3 cut(s) 153, 668, 1804
Eco81I CCTNAGG 2 cut(s) 240, 389
Eco88I CYCGRG 1 cut(s) 1649
EcoO109I RGGNCCY 1 cut(s) 1504
EcoRI GAATTC 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 2098
EcoT38I GRGCYC 1 cut(s) 1977
ErhI CCWWGG 1 cut(s) 2098
FaqI GGGAC 4 cut(s) 1065, 1361, 1765, 1915
FauNDI CATATG 3 cut(s) 808, 839, 1372
FblI GTMKAC 1 cut(s) 1392
FokI GGATG 5 cut(s) 257, 380, 1106, 1265, 1459
FriOI GRGCYC 1 cut(s) 1977
FspBI CTAG 1 cut(s) 794
GlaI GCGC 3 cut(s) 1452, 1515, 1842
GsaI CCCAGC 1 cut(s) 131
HaeIII GGCC 4 cut(s) 1256, 1277, 1506, 1625
HapII CCGG 5 cut(s) 192, 312, 320, 1270, 1650
HgaI GACGC 3 cut(s) 41, 204, 1403
HhaI GCGC 3 cut(s) 1453, 1516, 1843
Hin1I GRCGYC 1 cut(s) 1778
Hin6I GCGC 3 cut(s) 1451, 1514, 1841
HinP1I GCGC 3 cut(s) 1451, 1514, 1841
HinfI GANTC 8 cut(s) 121, 394, 774, 1097, 1118, 1193, 1836, 1903
HpaII CCGG 5 cut(s) 192, 312, 320, 1270, 1650
HphI GGTGA 4 cut(s) 116, 1027, 1796, 1867
Hpy166II GTNNAC 4 cut(s) 926, 1393, 1758, 1923
Hpy188I TCNGA 7 cut(s) 57, 399, 687, 1093, 1117, 1198, 1720
Hpy188III TCNNGA 7 cut(s) 268, 312, 320, 340, 1528, 1774, 1900
Hpy8I GTNNAC 4 cut(s) 926, 1393, 1758, 1923
Hpy99I CGWCG 1 cut(s) 206
HpyCH4III ACNGT 4 cut(s) 169, 1600, 1621, 1808
HpyCH4IV ACGT 5 cut(s) 204, 1313, 1760, 1778, 1928
HpyF3I CTNAG 5 cut(s) 240, 389, 879, 1584, 1682
HpySE526I ACGT 5 cut(s) 204, 1313, 1760, 1778, 1928
Hsp92I GRCGYC 1 cut(s) 1778
HspAI GCGC 3 cut(s) 1451, 1514, 1841
Kpn2I TCCGGA 2 cut(s) 311, 319
KpnI GGTACC 1 cut(s) 742
Kzo9I GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
LguI GCTCTTC 1 cut(s) 1529
LmnI GCTCC 1 cut(s) 1651
LweI GCATC 1 cut(s) 837
MaeI CTAG 1 cut(s) 794
MaeII ACGT 5 cut(s) 204, 1313, 1760, 1778, 1928
MaeIII GTNAC 3 cut(s) 443, 726, 1702
MalI GATC 7 cut(s) 59, 225, 338, 689, 899, 1224, 1545
MboI GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
MfeI CAATTG 4 cut(s) 146, 788, 1407, 1424
MflI RGATCY 4 cut(s) 57, 336, 1222, 1543
MhlI GDGCHC 7 cut(s) 510, 885, 896, 1595, 1760, 1899, 1977
MlsI TGGCCA 1 cut(s) 1256
MluNI TGGCCA 1 cut(s) 1256
MlyI GAGTC 1 cut(s) 768
MmeI TCCRAC 2 cut(s) 1200, 1424
Mox20I TGGCCA 1 cut(s) 1256
MroI TCCGGA 2 cut(s) 311, 319
MroXI GAANNNNTTC 2 cut(s) 138, 1523
MscI TGGCCA 1 cut(s) 1256
MseI TTAA 5 cut(s) 261, 1128, 1260, 1341, 1551
MslI CAYNNNNRTG 2 cut(s) 73, 1940
Msp20I TGGCCA 1 cut(s) 1256
MspA1I CMGCKG 3 cut(s) 131, 535, 1634
MspCI CTTAAG 1 cut(s) 1127
MspI CCGG 5 cut(s) 192, 312, 320, 1270, 1650
MspR9I CCNGG 2 cut(s) 1650, 1651
MunI CAATTG 4 cut(s) 146, 788, 1407, 1424
Mva1269I GAATGC 1 cut(s) 1687
MvnI CGCG 2 cut(s) 1453, 1841
NciI CCSGG 2 cut(s) 1650, 1651
NdeI CATATG 3 cut(s) 808, 839, 1372
NdeII GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
NheI GCTAGC 1 cut(s) 793
NlaIV GGNNCC 5 cut(s) 99, 740, 1224, 1647, 1674
NmuCI GTSAC 2 cut(s) 443, 1702
NspI RCATGY 6 cut(s) 179, 676, 783, 1136, 1158, 1541
NspV TTCGAA 1 cut(s) 816
PaeI GCATGC 2 cut(s) 1136, 1541
PciI ACATGT 3 cut(s) 175, 672, 779
PciSI GCTCTTC 1 cut(s) 1529
PctI GAATGC 1 cut(s) 1687
PdmI GAANNNNTTC 2 cut(s) 138, 1523
PfeI GAWTC 7 cut(s) 121, 394, 1097, 1118, 1193, 1836, 1903
PflFI GACNNNGTC 1 cut(s) 1927
PleI GAGTC 1 cut(s) 768
PpsI GAGTC 1 cut(s) 768
PscI ACATGT 3 cut(s) 175, 672, 779
PshBI ATTAAT 1 cut(s) 1341
PsiI TTATAA 1 cut(s) 858
PspFI CCCAGC 1 cut(s) 127
PspN4I GGNNCC 5 cut(s) 99, 740, 1224, 1647, 1674
PspPI GGNCC 2 cut(s) 1412, 1504
PstNI CAGNNNCTG 2 cut(s) 538, 1507
PsuI RGATCY 4 cut(s) 57, 336, 1222, 1543
PsyI GACNNNGTC 1 cut(s) 1927
PvuII CAGCTG 2 cut(s) 131, 1634
RsaI GTAC 6 cut(s) 171, 647, 740, 1293, 1657, 1793
RsaNI GTAC 6 cut(s) 170, 646, 739, 1292, 1656, 1792
RseI CAYNNNNRTG 2 cut(s) 73, 1940
SapI GCTCTTC 1 cut(s) 1529
SaqAI TTAA 5 cut(s) 261, 1128, 1260, 1341, 1551
Sau3AI GATC 7 cut(s) 57, 223, 336, 687, 897, 1222, 1543
Sau96I GGNCC 2 cut(s) 1412, 1504
SchI GAGTC 1 cut(s) 768
ScrFI CCNGG 2 cut(s) 1650, 1651
SduI GDGCHC 7 cut(s) 510, 885, 896, 1595, 1760, 1899, 1977
SfaNI GCATC 1 cut(s) 837
SfcI CTRYAG 3 cut(s) 424, 1389, 1617
SfuI TTCGAA 1 cut(s) 816
SinI GGWCC 1 cut(s) 1412
SmaI CCCGGG 1 cut(s) 1651
SmiMI CAYNNNNRTG 2 cut(s) 73, 1940
SmlI CTYRAG 4 cut(s) 209, 1127, 1203, 1398
SmoI CTYRAG 4 cut(s) 209, 1127, 1203, 1398
SphI GCATGC 2 cut(s) 1136, 1541
SsiI CCGC 4 cut(s) 484, 535, 1208, 1998
SspI AATATT 2 cut(s) 464, 934
SspMI CTAG 1 cut(s) 794
StyD4I CCNGG 2 cut(s) 1648, 1649
StyI CCWWGG 1 cut(s) 2098
TaaI ACNGT 4 cut(s) 169, 1600, 1621, 1808
TaiI ACGT 5 cut(s) 207, 1316, 1763, 1781, 1931
TaqI TCGA 5 cut(s) 816, 995, 1307, 1527, 1595
TaqII GACCGA 1 cut(s) 431
TatI WGTACW 2 cut(s) 169, 1791
TauI GCSGC 2 cut(s) 487, 538
TfiI GAWTC 7 cut(s) 121, 394, 1097, 1118, 1193, 1836, 1903
Tru1I TTAA 5 cut(s) 261, 1128, 1260, 1341, 1551
Tru9I TTAA 5 cut(s) 261, 1128, 1260, 1341, 1551
TscAI CASTG 4 cut(s) 54, 172, 1626, 1888
TseFI GTSAC 2 cut(s) 443, 1702
Tsp45I GTSAC 2 cut(s) 443, 1702
TspDTI ATGAA 4 cut(s) 261, 984, 1020, 1895
TspGWI ACGGA 2 cut(s) 26, 944
TspMI CCCGGG 1 cut(s) 1649
TspRI CASTG 4 cut(s) 54, 172, 1626, 1888
Tth111I GACNNNGTC 1 cut(s) 1927
Vha464I CTTAAG 1 cut(s) 1127
VneI GTGCAC 1 cut(s) 1756
VpaK11BI GGWCC 1 cut(s) 1412
VspI ATTAAT 1 cut(s) 1341
XapI RAATTY 4 cut(s) 110, 824, 986, 1185
XceI RCATGY 6 cut(s) 179, 676, 783, 1136, 1158, 1541
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmaI CCCGGG 1 cut(s) 1649
XmiI GTMKAC 1 cut(s) 1392
XmnI GAANNNNTTC 2 cut(s) 138, 1523
XspI CTAG 1 cut(s) 794
ZraI GACGTC 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.