Rh5BG018400

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000724
Physical Location & Seq
Forward (+)
1336475 .. 1340830
4356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG018400.1

Sequence Viewer

Length: 2076 bp
ATGGAAGAAATACGTACTTCCGAACAATCCAAAGCCCTCTATCAAAGCCTCAGAGACGGTGACGTATTAGAAGTGGTGAAAGCTTATGCAAAAGCTACTACTCTTGATGCAACATCGATATCAAAGCTAATTCCAACAGTGCACGACGACACAATCCTCCATATGGCGATTTACATGAAGCAAGAAAGCATCGCAATAGGAATCATCGAAATAAGCAGGCATAATGACGAGCTAATTAAAAAACCCAATGCGTTTGGAAACACAGTTCTTCATGAGGCTGCAGCAACTGATTGTGTACGTGTTGTGGAGAAGTTGTTGGAAAAGGCACCGGATTTGCTGTCCATTCCAAACAATGAAGGGGAAATGCCTCTCTATACAGCAGCTCACTTTGGCCAGAAAGAAATTTTCATTTTGCTGGCTGAAAAACTAAAAAACAATGATTATGATCTAATTCGTCCCCATTTGTGCTCCCTAAAAGGTTCCTCCATATGCAGTACCGTTCTTCATGCTGCAATACATGCCGAGTTCTTTGAGCTTGCACTTTGGATAGCTAGAAAGCCGGAGTATGCGAAGATTGTTCAACTAAAAGACAAAAATTTGAAGACGCCTCTTCAGCTCCTCTCATCCAATTCTTCAGCATTCAAGAGTGGAATGAAATGTGGACTGATCAAGAGGTTCATTTACAACTGTGCTCCATATGAAGATGCTCATGAACAAAATTCCAGTGATGATAGTCATGTTCAAAGTTTCAAAAGATCAGCTGCTCTGTTTCTAAACTTTCTACGGCGAGTCTTCTCTTCAGTTAATAGATCGGTTTGGATTGTTCTTCGAGCATGGAGTACGATGAAGAACATCTACAACGAAAGGAAGAGGCATGGATTGGCTTTAGAACTAGCCAAGTTTCTAATTGAAGCAGACTTTTCATGGGACGTCACACGACAAGCATCAAATAATGAAAGTTCGATTCTGACTGCTGGTGTAAACCCATTCCCAGATTCCAAAGATTCAGGTGATTTTGGTATCACTAGCCCTGAAGGCCCCCCGCCTCCATCCCTGAAAAAGAGTACTTCAATTATCCCATTGCACATTGCAACAGAGCATGGAATATTAGAAATTGTGGAGGAGACTCTTAGAACCCACCCTGCGATATTCGAGTATAGAAATATCGACAATCAAAACATACTGCACCTGTCCATTATGCACCGTCAGTGGGACATTTTTCATCGAGTAACAAAGATGGAGACACCTAAGTCGAGGTTGCAACGACAACTCGATGTTAATGACTTCACAGTATTGCACCAAGTTGGCAACATAGAGCATTACAATGGAGGCACCCAGCCTGGCCCTGCACTCCAATTGCAAGAAGAGCTGGAGTGGTTCGAGAAGGTGGAGGAATATGTAGAGATTCTCAAGTGCTTGTCTGAGAACATTGACGTGGATAAGATAATACCACCCGATTCTCACAAGGAAGAAAAGAAACGGGAGACCCCCATAGAGTACTTTCGTCGCACACATGATCCGCTTCTCGAGAGGGCACAAGAATGGCTGAAGCGGACCTCCGAGTCGTGCTCGACGGTGGCCGGACTAATGGCCACCGTCGCCTTCGCAGCCGCCTTCACTGTCCCTGGAGGCAACGACGAGAACAGCGGCACTCCACTCCTTCTTCACAACCCTTTCTTCCTAGTCTTCATCATTACCGACGCTCTCTCCCTAGCCAGCTCGCTTACGTCACTCGTCATGTTCCTCTCCATCCTGACGTCACCGTTCGAGCTCCACGATTTCCGCCACTCTCTCCCTCGGAAGCTGATCCTCGGCTTCACCTTCCTCTTCTTCTCGGTGGCGGTGACCATGCTGGCCTTTGCGTCCACACTGATGCTGACAATTCCAATGAAGAAGAGAGTGACCAAAAGTTTCGTGTACTGCGTTGCGTTTCTTCCCGTCACCATGTTTGCACTGTTGCAATTCCCGTTGTTGTTGGCCTTCAAAAAGAGTCTCAAGTACCCAGTCATGGCCATGAAAAGCGTATGGCGGTTTCTTATCTCTGCTCCTAATTCGAAAATTGCCAAGACCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

691

Amino Acids

78.19

Weight (kDa)

7.12

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 82 - 142 1.6e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 90 - 139 9.8e-06 Ankyrin repeats (many copies)
PGG PF13962 514 - 626 9.9e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1249, 1561
AatII GACGTC 2 cut(s) 933, 1760
AccB1I GGYRCC 2 cut(s) 325, 1331
AciI CCGC 8 cut(s) 1043, 1520, 1552, 1611, 1647, 1783, 1841, 2029
AclWI GGATC 2 cut(s) 1511, 1801
AcoI YGGCCR 4 cut(s) 391, 1578, 1590, 2010
AcsI RAATTY 3 cut(s) 402, 595, 718
AcuI CTGAAG 5 cut(s) 596, 618, 783, 1053, 1568
AcyI GRCGYC 3 cut(s) 605, 930, 1757
AfaI GTAC 8 cut(s) 16, 297, 496, 841, 1066, 1499, 1919, 2000
AfiI CCNNNNNNNGG 3 cut(s) 163, 1210, 2008
AflIII ACRYGT 1 cut(s) 298
AgsI TTSAA 8 cut(s) 581, 601, 643, 743, 751, 911, 1071, 1984
AjiI CACGTC 1 cut(s) 1435
AjnI CCWGG 2 cut(s) 1339, 1624
AloI GAACNNNNNNTCC 2 cut(s) 249, 281
Alw21I GWGCWC 5 cut(s) 144, 470, 694, 1571, 1773
Alw26I GTCTC 5 cut(s) 48, 1118, 1235, 1478, 1997
Alw44I GTGCAC 1 cut(s) 140
AlwI GGATC 2 cut(s) 1511, 1801
AlwNI CAGNNNCTG 1 cut(s) 287
Ama87I CYCGRG 1 cut(s) 1526
AoxI GGCC 8 cut(s) 391, 1036, 1342, 1578, 1590, 1854, 1977, 2010
ApaLI GTGCAC 1 cut(s) 140
ApeKI GCWGC 6 cut(s) 278, 281, 380, 509, 761, 1607
ApoI RAATTY 3 cut(s) 402, 595, 718
AspS9I GGNCC 3 cut(s) 1037, 1343, 1554
AsuHPI GGTGA 7 cut(s) 71, 88, 1022, 1752, 1810, 1855, 1933
AsuII TTCGAA 1 cut(s) 2054
AvaI CYCGRG 1 cut(s) 1526
AvaII GGWCC 1 cut(s) 1554
BaeGI GKGCMC 2 cut(s) 144, 1537
BalI TGGCCA 3 cut(s) 393, 1592, 2012
BanI GGYRCC 2 cut(s) 325, 1331
BanII GRGCYC 1 cut(s) 1773
BarI GAAGNNNNNNTAC 2 cut(s) 839, 871
BbsI GAAGAC 3 cut(s) 608, 784, 1678
Bbv12I GWGCWC 5 cut(s) 144, 470, 694, 1571, 1773
BbvI GCAGC 6 cut(s) 265, 293, 392, 496, 748, 1619
BccI CCATC 3 cut(s) 1057, 1231, 1757
BceAI ACGGC 1 cut(s) 800
BciT130I CCWGG 2 cut(s) 1341, 1626
BclI TGATCA 1 cut(s) 666
BcoDI GTCTC 5 cut(s) 48, 1118, 1235, 1478, 1997
BfaI CTAG 5 cut(s) 552, 893, 1026, 1682, 1712
BfmI CTRYAG 1 cut(s) 279
BglI GCCNNNNNGGC 1 cut(s) 1035
BisI GCNGC 8 cut(s) 279, 282, 381, 510, 762, 1608, 1611, 1648
BlsI GCNGC 8 cut(s) 280, 283, 382, 511, 763, 1609, 1612, 1649
BmcAI AGTACT 2 cut(s) 1066, 1499
Bme1390I CCNGG 2 cut(s) 1341, 1626
Bme18I GGWCC 1 cut(s) 1554
BmeT110I CYCGRG 1 cut(s) 1526
BmgBI CACGTC 1 cut(s) 1435
BmgT120I GGNCC 3 cut(s) 1037, 1343, 1554
BmiI GGNNCC 4 cut(s) 327, 481, 1039, 1333
BmrFI CCNGG 2 cut(s) 1341, 1626
BmrI ACTGGG 2 cut(s) 1997, 2065
BmsI GCATC 5 cut(s) 97, 198, 694, 953, 1863
BmuI ACTGGG 2 cut(s) 1997, 2065
BpiI GAAGAC 3 cut(s) 608, 784, 1678
BplI GAGNNNNNCTC 2 cut(s) 1553, 1585
BpmI CTGGAG 2 cut(s) 1391, 1647
Bpu14I TTCGAA 1 cut(s) 2054
BpuEI CTTGAG 2 cut(s) 1394, 1979
Bsa29I ATCGAT 1 cut(s) 116
BsaAI YACGTR 2 cut(s) 14, 299
BsaBI GATNNNNATC 1 cut(s) 444
BsaHI GRCGYC 3 cut(s) 605, 930, 1757
BsaI GGTCTC 1 cut(s) 1478
BsaJI CCNNGG 3 cut(s) 1624, 1796, 1810
BsaWI WCCGGW 1 cut(s) 328
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 1691, 1721
Bsc4I CCNNNNNNNGG 3 cut(s) 163, 1210, 2008
Bse1I ACTGG 3 cut(s) 723, 2003, 2071
Bse3DI GCAATG 2 cut(s) 1079, 1086
Bse8I GATNNNNATC 1 cut(s) 444
BseBI CCWGG 2 cut(s) 1341, 1626
BseCI ATCGAT 1 cut(s) 116
BseDI CCNNGG 3 cut(s) 1624, 1796, 1810
BseGI GGATG 3 cut(s) 623, 1049, 1749
BseJI GATNNNNATC 1 cut(s) 444
BseLI CCNNNNNNNGG 3 cut(s) 163, 1210, 2008
BseMI GCAATG 2 cut(s) 1079, 1086
BseMII CTCAG 2 cut(s) 64, 1413
BseNI ACTGG 3 cut(s) 723, 2003, 2071
BseRI GAGGAG 2 cut(s) 608, 1136
BseSI GKGCMC 2 cut(s) 144, 1537
BseXI GCAGC 6 cut(s) 265, 293, 392, 496, 748, 1619
BseYI CCCAGC 1 cut(s) 1335
BsgI GTGCAG 2 cut(s) 1169, 1332
BshFI GGCC 8 cut(s) 393, 1038, 1344, 1580, 1592, 1856, 1979, 2012
BshNI GGYRCC 2 cut(s) 325, 1331
BshVI ATCGAT 1 cut(s) 116
BsiHKAI GWGCWC 5 cut(s) 144, 470, 694, 1571, 1773
BsiHKCI CYCGRG 1 cut(s) 1526
BsiSI CCGG 3 cut(s) 329, 560, 1581
BslFI GGGAC 4 cut(s) 441, 941, 1226, 1607
BslI CCNNNNNNNGG 3 cut(s) 163, 1210, 2008
BsmAI GTCTC 5 cut(s) 48, 1118, 1235, 1478, 1997
BsmBI CGTCTC 1 cut(s) 48
BsmFI GGGAC 4 cut(s) 441, 941, 1226, 1607
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 8 cut(s) 393, 1038, 1344, 1580, 1592, 1856, 1979, 2012
Bso31I GGTCTC 1 cut(s) 1478
BsoBI CYCGRG 1 cut(s) 1526
Bsp119I TTCGAA 1 cut(s) 2054
Bsp1286I GDGCHC 6 cut(s) 144, 470, 694, 1537, 1571, 1773
Bsp143I GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
BspACI CCGC 8 cut(s) 1043, 1520, 1552, 1611, 1647, 1783, 1841, 2029
BspANI GGCC 8 cut(s) 393, 1038, 1344, 1580, 1592, 1856, 1979, 2012
BspCNI CTCAG 2 cut(s) 63, 1414
BspDI ATCGAT 1 cut(s) 116
BspHI TCATGA 2 cut(s) 271, 709
BspLI GGNNCC 4 cut(s) 327, 481, 1039, 1333
BspMAI CTGCAG 1 cut(s) 283
BspPI GGATC 2 cut(s) 1511, 1801
BspQI GCTCTTC 1 cut(s) 1359
BspT104I TTCGAA 1 cut(s) 2054
BspT107I GGYRCC 2 cut(s) 325, 1331
BspTNI GGTCTC 1 cut(s) 1478
BsrDI GCAATG 2 cut(s) 1079, 1086
BsrI ACTGG 3 cut(s) 723, 2003, 2071
BssECI CCNNGG 3 cut(s) 1624, 1796, 1810
BssMI GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
BssNI GRCGYC 3 cut(s) 605, 930, 1757
Bst2UI CCWGG 2 cut(s) 1341, 1626
Bst6I CTCTTC 6 cut(s) 615, 802, 863, 1359, 1832, 1889
BstACI GRCGYC 3 cut(s) 605, 930, 1757
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBAI YACGTR 2 cut(s) 14, 299
BstBI TTCGAA 1 cut(s) 2054
BstC8I GCNNGC 6 cut(s) 218, 417, 537, 1717, 1721, 1854
BstDEI CTNAG 4 cut(s) 50, 1130, 1248, 1422
BstEII GGTNACC 1 cut(s) 1843
BstF5I GGATG 3 cut(s) 623, 1049, 1749
BstKTI GATC 6 cut(s) 448, 669, 758, 812, 1519, 1809
BstMAI GTCTC 5 cut(s) 48, 1118, 1235, 1478, 1997
BstMBI GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
BstMWI GCNNNNNNNGC 6 cut(s) 518, 613, 1035, 1366, 1598, 1607
BstNI CCWGG 2 cut(s) 1341, 1626
BstNSI RCATGY 1 cut(s) 521
BstPI GGTNACC 1 cut(s) 1843
BstSCI CCNGG 2 cut(s) 1339, 1624
BstSFI CTRYAG 1 cut(s) 279
BstSLI GKGCMC 2 cut(s) 144, 1537
BstSNI TACGTA 1 cut(s) 14
BstV1I GCAGC 6 cut(s) 265, 293, 392, 496, 748, 1619
BstV2I GAAGAC 3 cut(s) 608, 784, 1678
Bsu15I ATCGAT 1 cut(s) 116
BsuRI GGCC 8 cut(s) 393, 1038, 1344, 1580, 1592, 1856, 1979, 2012
BsuTUI ATCGAT 1 cut(s) 116
BtgZI GCGATG 1 cut(s) 175
BtrI CACGTC 1 cut(s) 1435
BtsCI GGATG 3 cut(s) 623, 1049, 1749
BtsIMutI CAGTG 6 cut(s) 144, 730, 1214, 1617, 1868, 1952
Cac8I GCNNGC 6 cut(s) 218, 417, 537, 1717, 1721, 1854
CaiI CAGNNNCTG 1 cut(s) 287
CciI TCATGA 2 cut(s) 271, 709
Cfr13I GGNCC 3 cut(s) 1037, 1343, 1554
ClaI ATCGAT 1 cut(s) 116
CseI GACGC 3 cut(s) 613, 1709, 1851
Csp6I GTAC 8 cut(s) 15, 296, 495, 840, 1065, 1498, 1918, 1999
CviQI GTAC 8 cut(s) 15, 296, 495, 840, 1065, 1498, 1918, 1999
DdeI CTNAG 4 cut(s) 50, 1130, 1248, 1422
DpnI GATC 6 cut(s) 447, 668, 757, 811, 1518, 1808
DpnII GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
DrdI GACNNNNNNGTC 2 cut(s) 1249, 1561
DseDI GACNNNNNNGTC 2 cut(s) 1249, 1561
EaeI YGGCCR 4 cut(s) 391, 1578, 1590, 2010
Eam1104I CTCTTC 6 cut(s) 615, 802, 863, 1359, 1832, 1889
EarI CTCTTC 6 cut(s) 615, 802, 863, 1359, 1832, 1889
EciI GGCGGA 1 cut(s) 1772
Ecl136II GAGCTC 1 cut(s) 1771
Eco105I TACGTA 1 cut(s) 14
Eco24I GRGCYC 1 cut(s) 1773
Eco31I GGTCTC 1 cut(s) 1478
Eco32I GATATC 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 1554
Eco53kI GAGCTC 1 cut(s) 1771
Eco57I CTGAAG 5 cut(s) 596, 618, 783, 1053, 1568
Eco88I CYCGRG 1 cut(s) 1526
Eco91I GGTNACC 1 cut(s) 1843
EcoICRI GAGCTC 1 cut(s) 1771
EcoO109I RGGNCCY 1 cut(s) 1037
EcoO65I GGTNACC 1 cut(s) 1843
EcoRII CCWGG 2 cut(s) 1339, 1624
EcoRV GATATC 1 cut(s) 120
EcoT38I GRGCYC 1 cut(s) 1773
Esp3I CGTCTC 1 cut(s) 48
FaqI GGGAC 4 cut(s) 441, 941, 1226, 1607
FauI CCCGC 1 cut(s) 1050
FauNDI CATATG 3 cut(s) 162, 488, 697
FbaI TGATCA 1 cut(s) 666
Fnu4HI GCNGC 8 cut(s) 279, 282, 381, 510, 762, 1608, 1611, 1648
FokI GGATG 3 cut(s) 610, 1036, 1736
FriOI GRGCYC 1 cut(s) 1773
Fsp4HI GCNGC 8 cut(s) 279, 282, 381, 510, 762, 1608, 1611, 1648
FspBI CTAG 5 cut(s) 552, 893, 1026, 1682, 1712
GluI GCNGC 8 cut(s) 279, 282, 381, 510, 762, 1608, 1611, 1648
GsaI CCCAGC 1 cut(s) 1339
GsuI CTGGAG 2 cut(s) 1391, 1647
HaeIII GGCC 8 cut(s) 393, 1038, 1344, 1580, 1592, 1856, 1979, 2012
HapII CCGG 3 cut(s) 329, 560, 1581
HgaI GACGC 3 cut(s) 613, 1709, 1851
Hin1I GRCGYC 3 cut(s) 605, 930, 1757
HindIII AAGCTT 1 cut(s) 81
HpaII CCGG 3 cut(s) 329, 560, 1581
HphI GGTGA 7 cut(s) 71, 88, 1022, 1752, 1810, 1855, 1933
Hpy166II GTNNAC 6 cut(s) 142, 296, 662, 982, 1866, 1918
Hpy188I TCNGA 6 cut(s) 22, 53, 969, 1423, 1561, 1800
Hpy188III TCNNGA 9 cut(s) 104, 272, 643, 670, 710, 1381, 1526, 1528, 1753
Hpy8I GTNNAC 6 cut(s) 142, 296, 662, 982, 1866, 1918
Hpy99I CGWCG 6 cut(s) 149, 1509, 1576, 1601, 1640, 1703
HpyAV CCTTC 8 cut(s) 350, 1028, 1378, 1612, 1624, 1670, 1831, 1990
HpyCH4IV ACGT 7 cut(s) 13, 63, 298, 930, 1434, 1727, 1757
HpyF10VI GCNNNNNNNGC 6 cut(s) 518, 613, 1035, 1366, 1598, 1607
HpyF3I CTNAG 4 cut(s) 50, 1130, 1248, 1422
HpySE526I ACGT 7 cut(s) 13, 63, 298, 930, 1434, 1727, 1757
Hsp92I GRCGYC 3 cut(s) 605, 930, 1757
Ksp22I TGATCA 1 cut(s) 666
Kzo9I GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
LguI GCTCTTC 1 cut(s) 1359
LmnI GCTCC 5 cut(s) 473, 621, 697, 1776, 2050
Lsp1109I GCAGC 6 cut(s) 265, 293, 392, 496, 748, 1619
LweI GCATC 5 cut(s) 97, 198, 694, 953, 1863
MaeI CTAG 5 cut(s) 552, 893, 1026, 1682, 1712
MaeII ACGT 7 cut(s) 13, 63, 298, 930, 1434, 1727, 1757
MaeIII GTNAC 8 cut(s) 59, 931, 1228, 1728, 1758, 1843, 1900, 1939
MalI GATC 6 cut(s) 447, 668, 757, 811, 1518, 1808
MboI GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
MfeI CAATTG 1 cut(s) 1355
MhlI GDGCHC 6 cut(s) 144, 470, 694, 1537, 1571, 1773
MlsI TGGCCA 3 cut(s) 393, 1592, 2012
MluNI TGGCCA 3 cut(s) 393, 1592, 2012
MlyI GAGTC 4 cut(s) 798, 1120, 1571, 1999
MmeI TCCRAC 2 cut(s) 158, 297
Mox20I TGGCCA 3 cut(s) 393, 1592, 2012
MscI TGGCCA 3 cut(s) 393, 1592, 2012
MseI TTAA 3 cut(s) 237, 804, 1278
MslI CAYNNNNRTG 5 cut(s) 1323, 1433, 1540, 1871, 2012
Msp20I TGGCCA 3 cut(s) 393, 1592, 2012
MspA1I CMGCKG 2 cut(s) 761, 1647
MspI CCGG 3 cut(s) 329, 560, 1581
MspR9I CCNGG 2 cut(s) 1341, 1626
MunI CAATTG 1 cut(s) 1355
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 2 cut(s) 1341, 1626
MwoI GCNNNNNNNGC 6 cut(s) 518, 613, 1035, 1366, 1598, 1607
NdeI CATATG 3 cut(s) 162, 488, 697
NdeII GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
NlaIV GGNNCC 4 cut(s) 327, 481, 1039, 1333
NmeAIII GCCGAG 2 cut(s) 547, 1791
NmuCI GTSAC 7 cut(s) 59, 931, 1728, 1758, 1843, 1900, 1939
NspI RCATGY 1 cut(s) 521
NspV TTCGAA 1 cut(s) 2054
PaeR7I CTCGAG 1 cut(s) 1526
PagI TCATGA 2 cut(s) 271, 709
PciSI GCTCTTC 1 cut(s) 1359
PcsI WCGNNNNNNNCGW 2 cut(s) 1773, 1920
PctI GAATGC 1 cut(s) 638
PfeI GAWTC 6 cut(s) 201, 964, 995, 1004, 1405, 1457
PkrI GCNGC 8 cut(s) 280, 283, 382, 511, 763, 1609, 1612, 1649
PleI GAGTC 4 cut(s) 797, 1120, 1570, 1998
PpsI GAGTC 4 cut(s) 797, 1120, 1570, 1998
Ppu21I YACGTR 2 cut(s) 14, 299
Psp124BI GAGCTC 1 cut(s) 1773
Psp6I CCWGG 2 cut(s) 1339, 1624
PspEI GGTNACC 1 cut(s) 1843
PspFI CCCAGC 1 cut(s) 1335
PspGI CCWGG 2 cut(s) 1339, 1624
PspN4I GGNNCC 4 cut(s) 327, 481, 1039, 1333
PspPI GGNCC 3 cut(s) 1037, 1343, 1554
PstI CTGCAG 1 cut(s) 283
PstNI CAGNNNCTG 1 cut(s) 287
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 8 cut(s) 16, 297, 496, 841, 1066, 1499, 1919, 2000
RsaNI GTAC 8 cut(s) 15, 296, 495, 840, 1065, 1498, 1918, 1999
RseI CAYNNNNRTG 5 cut(s) 1323, 1433, 1540, 1871, 2012
SacI GAGCTC 1 cut(s) 1773
SapI GCTCTTC 1 cut(s) 1359
SaqAI TTAA 3 cut(s) 237, 804, 1278
SatI GCNGC 8 cut(s) 279, 282, 381, 510, 762, 1608, 1611, 1648
Sau3AI GATC 6 cut(s) 445, 666, 755, 809, 1516, 1806
Sau96I GGNCC 3 cut(s) 1037, 1343, 1554
ScaI AGTACT 2 cut(s) 1066, 1499
SchI GAGTC 4 cut(s) 798, 1120, 1571, 1999
ScrFI CCNGG 2 cut(s) 1341, 1626
SduI GDGCHC 6 cut(s) 144, 470, 694, 1537, 1571, 1773
SfaNI GCATC 5 cut(s) 97, 198, 694, 953, 1863
SfcI CTRYAG 1 cut(s) 279
Sfr274I CTCGAG 1 cut(s) 1526
SfuI TTCGAA 1 cut(s) 2054
SinI GGWCC 1 cut(s) 1554
SlaI CTCGAG 1 cut(s) 1526
SmiMI CAYNNNNRTG 5 cut(s) 1323, 1433, 1540, 1871, 2012
SmlI CTYRAG 3 cut(s) 1409, 1526, 1994
SmoI CTYRAG 3 cut(s) 1409, 1526, 1994
SnaBI TACGTA 1 cut(s) 14
SsiI CCGC 8 cut(s) 1043, 1520, 1552, 1611, 1647, 1783, 1841, 2029
SspI AATATT 1 cut(s) 1107
SspMI CTAG 5 cut(s) 552, 893, 1026, 1682, 1712
SstI GAGCTC 1 cut(s) 1773
StyD4I CCNGG 2 cut(s) 1339, 1624
TaiI ACGT 7 cut(s) 16, 66, 301, 933, 1437, 1730, 1760
TatI WGTACW 3 cut(s) 1064, 1497, 1917
TauI GCSGC 2 cut(s) 1613, 1650
TfiI GAWTC 6 cut(s) 201, 964, 995, 1004, 1405, 1457
Tru1I TTAA 3 cut(s) 237, 804, 1278
Tru9I TTAA 3 cut(s) 237, 804, 1278
TscAI CASTG 6 cut(s) 144, 730, 1214, 1624, 1875, 1959
TseFI GTSAC 7 cut(s) 59, 931, 1728, 1758, 1843, 1900, 1939
TseI GCWGC 6 cut(s) 278, 281, 380, 509, 761, 1607
Tsp45I GTSAC 7 cut(s) 59, 931, 1728, 1758, 1843, 1900, 1939
TspRI CASTG 6 cut(s) 144, 730, 1214, 1624, 1875, 1959
VneI GTGCAC 1 cut(s) 140
VpaK11BI GGWCC 1 cut(s) 1554
XapI RAATTY 3 cut(s) 402, 595, 718
XceI RCATGY 1 cut(s) 521
XhoI CTCGAG 1 cut(s) 1526
XspI CTAG 5 cut(s) 552, 893, 1026, 1682, 1712
ZraI GACGTC 2 cut(s) 931, 1758
ZrmI AGTACT 2 cut(s) 1066, 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.