Prupe.4G014100_v2.0.a1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000724
Physical Location & Seq
Forward (+)
654716 .. 658075
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G014100.2

Sequence Viewer

Length: 2160 bp
ATGGAGGACTTAGAGATAGAGCACGCAGAGATGGCGTACTGGAGAACGGAAGAGGTTCTTCTTAAAGACGAGGGAGAGAGTGCAAGGAAAATTGAAGTACTGAAACTTCCTTACGATCTAGCCATGTTGAATGACTGGGAAGGCATGAAGAGATACTACGTGGACAATCCGCAAAAACTGAATTCTCCAATGACAGTGGACGAAGACACTGCATTGCACATTGTAGCGTCCTGCTGCAGGAGAAAATCACAGGGCAAACAAGTCCTTGAATTCTTGATTAATTTACTGCCACCAAGCTATGATGAAAGATGCAAGGCCGTGAGGGTTCCAAATAAACTCGGCAACAACGTTCTTCACGAGGTGGCGATGTCCGGAAATCTGGAGGCAGCAACTTTCTTAGTGATCAACTTCAACAAACCTGCAGGAAAAACTAGTAACGAGGAGAATTCTACACTGCCTCTGCTAGATATTCGGAACGAATTAGGAGAATCACCATTGTACAGGGCTGCTGCTCTTGGTCACCCTGACCTGGTCCAGTTTTTTGCTGACGAACTGGAGGAGAATCCGGAGAATCTTCGGAGGCACTTCCACCGGAATGATAGAATGTCCATTCTTCATATTGCAGTCATTGGCCAACAATTTAGGACTGCTCTTTGGTTGCAGAGCAAGTACCCATTTCTTGCAACTAAGAGGGAAGGTAAAGGATTGACAAGCCTTCAATTGCTAGCCCAAATGCCAACTGCCTTCACACCACAATTTCTACAAAGCAGATGGAAGATGCTCATATATTATTGCCTTCCTGCTCGAGACCTGGAGGTCACAACAAATCACAAGGATGATGTGGAGAGCAGCTTGGGCAGCAACCAACACCCCCAATCCATCTCTTGGAAGAAGCCTGAAGGTATTCTGAAGATGTACACTTCCCTGTGGGACTTCCTCGCTAAAGAAATGGACATAATCGAAAAGATCTGGAAGGATAAGAGAATTAAACATGCTCTTAAAAACCTCATCCCTTTGCTCGTCGAGAAAGACAATTCATGGCAGAATTCTAAAGAAGCAAAGGGCAAGACGATATCTCTGGGGTCAGTGGAAAATCTTTGTAAGGGTGATAATGATGGAGGAGATCAACAAGGAAAGGATTCCGCAGAACCAACCAATTCTAAGAAGCAGAGCATGTATAAGTATAACCCATTGCTTATAGCAACTATCACTGGAATTGTGCCTATTGTTGCAGAGATACTTAGGCAGCATCCTCAAGCAGCTGAGCACGTTAGCCATAGTGAACAGAACATTTTGCATCTGGCCATTAAGCACCGTCAAAGAGAGATCCTTGAGCTTCTAAAAAGGAAGCCAACAACCATCTCCAGGTTGAATGAGATGATTGACAGTGACGGCAATACCATATTGCACCAAGCTGCAGATAGGAGCTACTACTCTGTAGCAATTTCTCAGAATTTAATTGGTCCAGCCATGCAATTGCAAACAGAGTTGCGTTGGATGATGGGTGTGAAAAACATAGTACCACCTCATTACATCATGCACCACAACAACAAGGATCAGACAGCGGAGGAGCTGTTCAATGATGAGCATAATGAGCTTCTGAAGTCAGCACAAGAATGGATAAAAGACACAGCTGAGTCGTGCTCAACTGTGGCAGTGTTGGTGTGCACTGTGGTCTTTGCAGCCGCCTACACCATGCCTGGGGGTAACGAACCAAATGGCCTTCCAGTTTTCCATGATTCTCCTCTCTTCTGGCTCTTCACCTGCATGGATGTCGTGGCCATCGCCTGCTCATTGTCATCGGTAGCCTTTTTCCTCTCTATCCTGTCCTCTCCCCTTGAGTATCCTTTTTTCTGTCACGTTCTTCCCCGCAAGCTCATGATCGGGTTCACCTTGCTCTTCTTGTCAATGGCAACCACCATGCTGGCCTTTGCTGCTACCATTTTGCTTGTGATTCGTATAGAGAAGAAATGGACTAAGTCAATGCTTTACTCTATTGCCTTTTTTCCTGTCCCTCTATTTGGCTTGCTGCAATTTCCTATGTACCAGTCTTTCAAAGAAATATATCATAAAATTACCAAGATTTTCCGCCCCTTCTTCGTTCCCTTTCTCGGCTTTTGCAAGAGGAGATCAATATGTGGTAAGAGCAAGGCGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

720

Amino Acids

82.04

Weight (kDa)

7.32

Isoelectric Point (pI)

57.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1772
AasI GACNNNNNNGTC 1 cut(s) 815
Acc36I ACCTGC 2 cut(s) 427, 1772
AccB7I CCANNNNNTGG 1 cut(s) 885
AccIII TCCGGA 2 cut(s) 371, 565
AciI CCGC 6 cut(s) 170, 1143, 1565, 1686, 1870, 2089
AclI AACGTT 1 cut(s) 348
AclWI GGATC 2 cut(s) 1321, 1563
AcoI YGGCCR 3 cut(s) 631, 1302, 1779
AcsI RAATTY 5 cut(s) 181, 269, 445, 1045, 1453
AcuI CTGAAG 3 cut(s) 918, 929, 1622
AdeI CACNNNGTG 1 cut(s) 361
AfaI GTAC 7 cut(s) 38, 99, 500, 671, 917, 1521, 2045
AfiI CCNNNNNNNGG 7 cut(s) 237, 529, 885, 1365, 1701, 2021, 2111
AgsI TTSAA 8 cut(s) 95, 130, 269, 412, 719, 1372, 1579, 2056
AhlI ACTAGT 1 cut(s) 431
AjnI CCWGG 4 cut(s) 528, 810, 1364, 1699
AloI GAACNNNNNNTCC 2 cut(s) 1559, 1591
Alw21I GWGCWC 4 cut(s) 24, 1269, 1646, 1670
Alw26I GTCTC 1 cut(s) 801
Alw44I GTGCAC 1 cut(s) 1666
AlwI GGATC 2 cut(s) 1321, 1563
Ama87I CYCGRG 1 cut(s) 804
Aor13HI TCCGGA 2 cut(s) 371, 565
AoxI GGCC 6 cut(s) 315, 631, 1302, 1720, 1779, 1926
ApaLI GTGCAC 1 cut(s) 1666
ApoI RAATTY 5 cut(s) 181, 269, 445, 1045, 1453
AseI ATTAAT 1 cut(s) 279
Asp700I GAANNNNTTC 3 cut(s) 54, 903, 1138
AspS9I GGNCC 2 cut(s) 532, 1463
AsuHPI GGTGA 5 cut(s) 483, 512, 1118, 1753, 1882
AsuNHI GCTAGC 1 cut(s) 724
AvaI CYCGRG 1 cut(s) 804
AvaII GGWCC 2 cut(s) 532, 1463
BaeGI GKGCMC 1 cut(s) 1670
BalI TGGCCA 3 cut(s) 633, 1304, 1781
BarI GAAGNNNNNNTAC 4 cut(s) 90, 122, 140, 172
BauI CACGAG 1 cut(s) 356
BbsI GAAGAC 1 cut(s) 210
Bbv12I GWGCWC 4 cut(s) 24, 1269, 1646, 1670
BccI CCATC 7 cut(s) 25, 765, 887, 1109, 1367, 1495, 1790
BceAI ACGGC 2 cut(s) 302, 1408
BcgI CGANNNNNNTGC 4 cut(s) 191, 225, 1756, 1790
BciT130I CCWGG 4 cut(s) 530, 812, 1366, 1701
BciVI GTATCC 1 cut(s) 1854
BclI TGATCA 1 cut(s) 402
BcoDI GTCTC 1 cut(s) 801
BcuI ACTAGT 1 cut(s) 431
BfaI CTAG 4 cut(s) 119, 432, 464, 725
BfmI CTRYAG 4 cut(s) 235, 420, 1416, 1437
BfuAI ACCTGC 2 cut(s) 427, 1772
BfuI GTATCC 1 cut(s) 1854
BglII AGATCT 1 cut(s) 966
BlpI GCTNAGC 1 cut(s) 1263
BmcAI AGTACT 1 cut(s) 99
Bme1390I CCNGG 4 cut(s) 530, 812, 1366, 1701
Bme18I GGWCC 2 cut(s) 532, 1463
BmeT110I CYCGRG 1 cut(s) 804
BmgT120I GGNCC 2 cut(s) 532, 1463
BmiI GGNNCC 1 cut(s) 327
BmrFI CCNGG 4 cut(s) 530, 812, 1366, 1701
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 4 cut(s) 299, 768, 1258, 1306
BmtI GCTAGC 1 cut(s) 728
BmuI ACTGGG 1 cut(s) 145
BpiI GAAGAC 1 cut(s) 210
BplI GAGNNNNNCTC 2 cut(s) 1628, 1660
BpmI CTGGAG 5 cut(s) 61, 401, 575, 833, 1348
Bpu1102I GCTNAGC 1 cut(s) 1263
BpuEI CTTGAG 3 cut(s) 1239, 1352, 1859
BsaAI YACGTR 1 cut(s) 160
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 1 cut(s) 1700
BsaWI WCCGGW 3 cut(s) 371, 565, 591
BsaXI ACNNNNNCTCC 2 cut(s) 1559, 1589
Bsc4I CCNNNNNNNGG 7 cut(s) 237, 529, 885, 1365, 1701, 2021, 2111
Bse1I ACTGG 7 cut(s) 44, 140, 535, 558, 1216, 1727, 2047
Bse3DI GCAATG 2 cut(s) 212, 1190
BseAI TCCGGA 2 cut(s) 371, 565
BseBI CCWGG 4 cut(s) 530, 812, 1366, 1701
BseDI CCNNGG 1 cut(s) 1700
BseGI GGATG 5 cut(s) 841, 1008, 1249, 1503, 1777
BseLI CCNNNNNNNGG 7 cut(s) 237, 529, 885, 1365, 1701, 2021, 2111
BseMI GCAATG 2 cut(s) 212, 1190
BseMII CTCAG 3 cut(s) 1254, 1463, 1626
BseNI ACTGG 7 cut(s) 44, 140, 535, 558, 1216, 1727, 2047
BseRI GAGGAG 6 cut(s) 455, 572, 1134, 1583, 1734, 2140
BseSI GKGCMC 1 cut(s) 1670
BshFI GGCC 6 cut(s) 317, 633, 1304, 1722, 1781, 1928
BsiHKAI GWGCWC 4 cut(s) 24, 1269, 1646, 1670
BsiHKCI CYCGRG 1 cut(s) 804
BsiSI CCGG 3 cut(s) 372, 566, 592
BslFI GGGAC 2 cut(s) 944, 1997
BslI CCNNNNNNNGG 7 cut(s) 237, 529, 885, 1365, 1701, 2021, 2111
BsmAI GTCTC 1 cut(s) 801
BsmFI GGGAC 2 cut(s) 944, 1997
BsnI GGCC 6 cut(s) 317, 633, 1304, 1722, 1781, 1928
Bso31I GGTCTC 1 cut(s) 801
BsoBI CYCGRG 1 cut(s) 804
Bsp1286I GDGCHC 4 cut(s) 24, 1269, 1646, 1670
Bsp13I TCCGGA 2 cut(s) 371, 565
Bsp1407I TGTACA 2 cut(s) 498, 915
Bsp143I GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
Bsp1720I GCTNAGC 1 cut(s) 1263
BspACI CCGC 6 cut(s) 170, 1143, 1565, 1686, 1870, 2089
BspANI GGCC 6 cut(s) 317, 633, 1304, 1722, 1781, 1928
BspCNI CTCAG 3 cut(s) 1255, 1462, 1627
BspEI TCCGGA 2 cut(s) 371, 565
BspHI TCATGA 1 cut(s) 1878
BspLI GGNNCC 1 cut(s) 327
BspMAI CTGCAG 3 cut(s) 239, 424, 1420
BspMI ACCTGC 2 cut(s) 427, 1772
BspOI GCTAGC 1 cut(s) 728
BspPI GGATC 2 cut(s) 1321, 1563
BspQI GCTCTTC 2 cut(s) 1763, 1904
BspTNI GGTCTC 1 cut(s) 801
BsrDI GCAATG 2 cut(s) 212, 1190
BsrGI TGTACA 2 cut(s) 498, 915
BsrI ACTGG 7 cut(s) 44, 140, 535, 558, 1216, 1727, 2047
BssECI CCNNGG 1 cut(s) 1700
BssMI GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
BssSI CACGAG 1 cut(s) 356
Bst2BI CACGAG 1 cut(s) 356
Bst2UI CCWGG 4 cut(s) 530, 812, 1366, 1701
Bst4CI ACNGT 5 cut(s) 196, 1316, 1388, 1651, 1672
Bst6I CTCTTC 5 cut(s) 45, 143, 1754, 1763, 1904
BstAUI TGTACA 2 cut(s) 498, 915
BstBAI YACGTR 1 cut(s) 160
BstC8I GCNNGC 6 cut(s) 24, 726, 1789, 1874, 1926, 2027
BstDEI CTNAG 9 cut(s) 10, 397, 687, 1161, 1241, 1263, 1449, 1635, 1977
BstEII GGTNACC 1 cut(s) 518
BstENI CCTNNNNNAGG 1 cut(s) 235
BstF5I GGATG 5 cut(s) 841, 1008, 1249, 1503, 1777
BstKTI GATC 8 cut(s) 118, 405, 969, 1126, 1329, 1558, 1884, 2132
BstMAI GTCTC 1 cut(s) 801
BstMBI GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
BstMWI GCNNNNNNNGC 5 cut(s) 32, 855, 858, 1594, 1934
BstNI CCWGG 4 cut(s) 530, 812, 1366, 1701
BstNSI RCATGY 2 cut(s) 995, 1177
BstPI GGTNACC 1 cut(s) 518
BstSCI CCNGG 4 cut(s) 528, 810, 1364, 1699
BstSFI CTRYAG 4 cut(s) 235, 420, 1416, 1437
BstSLI GKGCMC 1 cut(s) 1670
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 2 cut(s) 966, 1326
BstXI CCANNNNNNTGG 1 cut(s) 1924
BstYI RGATCY 2 cut(s) 966, 1326
BsuI GTATCC 1 cut(s) 1854
BsuRI GGCC 6 cut(s) 317, 633, 1304, 1722, 1781, 1928
BtgZI GCGATG 2 cut(s) 380, 1768
BtsCI GGATG 5 cut(s) 841, 1008, 1249, 1503, 1777
BtsI GCAGTG 3 cut(s) 207, 452, 1662
BtsIMutI CAGTG 8 cut(s) 201, 207, 452, 1092, 1209, 1393, 1662, 1668
BveI ACCTGC 2 cut(s) 427, 1772
Cac8I GCNNGC 6 cut(s) 24, 726, 1789, 1874, 1926, 2027
CciI TCATGA 1 cut(s) 1878
Cfr13I GGNCC 2 cut(s) 532, 1463
CseI GACGC 1 cut(s) 216
CsiI ACCWGGT 1 cut(s) 528
Csp6I GTAC 7 cut(s) 37, 98, 499, 670, 916, 1520, 2044
CspCI CAANNNNNGTGG 2 cut(s) 177, 212
CviQI GTAC 7 cut(s) 37, 98, 499, 670, 916, 1520, 2044
DdeI CTNAG 9 cut(s) 10, 397, 687, 1161, 1241, 1263, 1449, 1635, 1977
DpnI GATC 8 cut(s) 117, 404, 968, 1125, 1328, 1557, 1883, 2131
DpnII GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
DraIII CACNNNGTG 1 cut(s) 361
DrdI GACNNNNNNGTC 1 cut(s) 815
DseDI GACNNNNNNGTC 1 cut(s) 815
EaeI YGGCCR 3 cut(s) 631, 1302, 1779
Eam1104I CTCTTC 5 cut(s) 45, 143, 1754, 1763, 1904
EarI CTCTTC 5 cut(s) 45, 143, 1754, 1763, 1904
EciI GGCGGA 1 cut(s) 2078
Eco31I GGTCTC 1 cut(s) 801
Eco32I GATATC 1 cut(s) 1074
Eco47I GGWCC 2 cut(s) 532, 1463
Eco57I CTGAAG 3 cut(s) 918, 929, 1622
Eco88I CYCGRG 1 cut(s) 804
Eco91I GGTNACC 1 cut(s) 518
EcoNI CCTNNNNNAGG 1 cut(s) 235
EcoO65I GGTNACC 1 cut(s) 518
EcoRI GAATTC 4 cut(s) 181, 269, 445, 1045
EcoRII CCWGG 4 cut(s) 528, 810, 1364, 1699
EcoRV GATATC 1 cut(s) 1074
FalI AAGNNNNNCTT 2 cut(s) 42, 74
FaqI GGGAC 2 cut(s) 944, 1997
FauI CCCGC 1 cut(s) 1877
FbaI TGATCA 1 cut(s) 402
FokI GGATG 5 cut(s) 848, 995, 1236, 1510, 1784
FspBI CTAG 4 cut(s) 119, 432, 464, 725
GsuI CTGGAG 5 cut(s) 61, 401, 575, 833, 1348
HaeIII GGCC 6 cut(s) 317, 633, 1304, 1722, 1781, 1928
HapII CCGG 3 cut(s) 372, 566, 592
HgaI GACGC 1 cut(s) 216
HinfI GANTC 7 cut(s) 488, 562, 571, 1139, 1637, 1739, 1954
HpaII CCGG 3 cut(s) 372, 566, 592
HphI GGTGA 5 cut(s) 483, 512, 1118, 1753, 1882
Hpy166II GTNNAC 6 cut(s) 163, 199, 918, 1283, 1668, 1890
Hpy188I TCNGA 6 cut(s) 474, 579, 909, 1452, 1560, 1602
Hpy188III TCNNGA 9 cut(s) 274, 356, 372, 380, 566, 806, 970, 1024, 1879
Hpy8I GTNNAC 6 cut(s) 163, 199, 918, 1283, 1668, 1890
Hpy99I CGWCG 1 cut(s) 1025
HpyAV CCTTC 9 cut(s) 134, 689, 725, 754, 806, 893, 967, 1733, 2104
HpyCH4III ACNGT 5 cut(s) 196, 1316, 1388, 1651, 1672
HpyCH4IV ACGT 4 cut(s) 159, 348, 1269, 1860
HpyF10VI GCNNNNNNNGC 5 cut(s) 32, 855, 858, 1594, 1934
HpyF3I CTNAG 9 cut(s) 10, 397, 687, 1161, 1241, 1263, 1449, 1635, 1977
HpySE526I ACGT 4 cut(s) 159, 348, 1269, 1860
Kpn2I TCCGGA 2 cut(s) 371, 565
Ksp22I TGATCA 1 cut(s) 402
Kzo9I GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
LguI GCTCTTC 2 cut(s) 1763, 1904
LmnI GCTCC 2 cut(s) 1425, 1570
LweI GCATC 4 cut(s) 299, 768, 1258, 1306
MabI ACCWGGT 1 cut(s) 528
MaeI CTAG 4 cut(s) 119, 432, 464, 725
MaeII ACGT 4 cut(s) 159, 348, 1269, 1860
MaeIII GTNAC 6 cut(s) 434, 518, 817, 1388, 1706, 1856
MalI GATC 8 cut(s) 117, 404, 968, 1125, 1328, 1557, 1883, 2131
MboI GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
MfeI CAATTG 2 cut(s) 719, 1475
MflI RGATCY 2 cut(s) 966, 1326
MhlI GDGCHC 4 cut(s) 24, 1269, 1646, 1670
MlsI TGGCCA 3 cut(s) 633, 1304, 1781
MluNI TGGCCA 3 cut(s) 633, 1304, 1781
MlyI GAGTC 1 cut(s) 1646
MmeI TCCRAC 1 cut(s) 1475
Mox20I TGGCCA 3 cut(s) 633, 1304, 1781
MroI TCCGGA 2 cut(s) 371, 565
MroXI GAANNNNTTC 3 cut(s) 54, 903, 1138
MscI TGGCCA 3 cut(s) 633, 1304, 1781
MseI TTAA 6 cut(s) 63, 279, 987, 999, 1308, 1457
MslI CAYNNNNRTG 4 cut(s) 594, 834, 1615, 1766
Msp20I TGGCCA 3 cut(s) 633, 1304, 1781
MspA1I CMGCKG 3 cut(s) 1262, 1565, 1634
MspI CCGG 3 cut(s) 372, 566, 592
MspR9I CCNGG 4 cut(s) 530, 812, 1366, 1701
MunI CAATTG 2 cut(s) 719, 1475
MvaI CCWGG 4 cut(s) 530, 812, 1366, 1701
MwoI GCNNNNNNNGC 5 cut(s) 32, 855, 858, 1594, 1934
NdeII GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
NheI GCTAGC 1 cut(s) 724
NlaIV GGNNCC 1 cut(s) 327
NmeAIII GCCGAG 2 cut(s) 318, 2091
NmuCI GTSAC 4 cut(s) 518, 817, 1388, 1856
NspI RCATGY 2 cut(s) 995, 1177
PaeR7I CTCGAG 1 cut(s) 804
PagI TCATGA 1 cut(s) 1878
PaqCI CACCTGC 1 cut(s) 1772
PciSI GCTCTTC 2 cut(s) 1763, 1904
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 354
PdmI GAANNNNTTC 3 cut(s) 54, 903, 1138
PfeI GAWTC 6 cut(s) 488, 562, 571, 1139, 1739, 1954
PflFI GACNNNGTC 2 cut(s) 530, 1978
PflMI CCANNNNNTGG 1 cut(s) 885
PleI GAGTC 1 cut(s) 1645
PpsI GAGTC 1 cut(s) 1645
Ppu21I YACGTR 1 cut(s) 160
PshBI ATTAAT 1 cut(s) 279
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 4 cut(s) 528, 810, 1364, 1699
PspEI GGTNACC 1 cut(s) 518
PspGI CCWGG 4 cut(s) 528, 810, 1364, 1699
PspN4I GGNNCC 1 cut(s) 327
PspPI GGNCC 2 cut(s) 532, 1463
PstI CTGCAG 3 cut(s) 239, 424, 1420
PsuI RGATCY 2 cut(s) 966, 1326
PsyI GACNNNGTC 2 cut(s) 530, 1978
PvuII CAGCTG 2 cut(s) 1262, 1634
RsaI GTAC 7 cut(s) 38, 99, 500, 671, 917, 1521, 2045
RsaNI GTAC 7 cut(s) 37, 98, 499, 670, 916, 1520, 2044
RseI CAYNNNNRTG 4 cut(s) 594, 834, 1615, 1766
SapI GCTCTTC 2 cut(s) 1763, 1904
SaqAI TTAA 6 cut(s) 63, 279, 987, 999, 1308, 1457
Sau3AI GATC 8 cut(s) 115, 402, 966, 1123, 1326, 1555, 1881, 2129
Sau96I GGNCC 2 cut(s) 532, 1463
SbfI CCTGCAGG 1 cut(s) 424
ScaI AGTACT 1 cut(s) 99
SchI GAGTC 1 cut(s) 1646
ScrFI CCNGG 4 cut(s) 530, 812, 1366, 1701
SdaI CCTGCAGG 1 cut(s) 424
SduI GDGCHC 4 cut(s) 24, 1269, 1646, 1670
SexAI ACCWGGT 1 cut(s) 528
SfaNI GCATC 4 cut(s) 299, 768, 1258, 1306
SfcI CTRYAG 4 cut(s) 235, 420, 1416, 1437
Sfr274I CTCGAG 1 cut(s) 804
SinI GGWCC 2 cut(s) 532, 1463
SlaI CTCGAG 1 cut(s) 804
SmiMI CAYNNNNRTG 4 cut(s) 594, 834, 1615, 1766
SmlI CTYRAG 4 cut(s) 804, 1254, 1331, 1838
SmoI CTYRAG 4 cut(s) 804, 1254, 1331, 1838
SpeI ACTAGT 1 cut(s) 431
Sse8387I CCTGCAGG 1 cut(s) 424
SsiI CCGC 6 cut(s) 170, 1143, 1565, 1686, 1870, 2089
SspMI CTAG 4 cut(s) 119, 432, 464, 725
StyD4I CCNGG 4 cut(s) 528, 810, 1364, 1699
TaaI ACNGT 5 cut(s) 196, 1316, 1388, 1651, 1672
TaiI ACGT 4 cut(s) 162, 351, 1272, 1863
TaqI TCGA 3 cut(s) 805, 960, 1023
TatI WGTACW 3 cut(s) 97, 498, 915
TauI GCSGC 1 cut(s) 1688
TfiI GAWTC 6 cut(s) 488, 562, 571, 1139, 1739, 1954
Tru1I TTAA 6 cut(s) 63, 279, 987, 999, 1308, 1457
Tru9I TTAA 6 cut(s) 63, 279, 987, 999, 1308, 1457
TscAI CASTG 8 cut(s) 201, 214, 459, 1092, 1216, 1393, 1662, 1675
TseFI GTSAC 4 cut(s) 518, 817, 1388, 1856
Tsp45I GTSAC 4 cut(s) 518, 817, 1388, 1856
TspDTI ATGAA 4 cut(s) 161, 318, 605, 1026
TspGWI ACGGA 1 cut(s) 62
TspRI CASTG 8 cut(s) 201, 214, 459, 1092, 1216, 1393, 1662, 1675
Tth111I GACNNNGTC 2 cut(s) 530, 1978
Van91I CCANNNNNTGG 1 cut(s) 885
VneI GTGCAC 1 cut(s) 1666
VpaK11BI GGWCC 2 cut(s) 532, 1463
VspI ATTAAT 1 cut(s) 279
XagI CCTNNNNNAGG 1 cut(s) 235
XapI RAATTY 5 cut(s) 181, 269, 445, 1045, 1453
XceI RCATGY 2 cut(s) 995, 1177
XhoI CTCGAG 1 cut(s) 804
XmnI GAANNNNTTC 3 cut(s) 54, 903, 1138
XspI CTAG 4 cut(s) 119, 432, 464, 725
ZrmI AGTACT 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.