RLG00000030981

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000724
Physical Location & Seq
Forward (+)
1152051 .. 1154781
2731 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030981

Sequence Viewer

Length: 1644 bp
ATGGAAGAAATACGTACTTCCGAACAATCGAAACCCCTCTATCAAAGCCTCAGAGACGGTGATGTATTAGAAGTGGTGAAAGCTTTTGCAAAAGCTACTACTCTTGATGCAAGATTAAAGCTAATTCCAACAGTGCACGGTGACACAATCCTCCATATGGCGATTTACATGGAGCAAGAAAGCATCGCAATAGGAATCATCGAAATAAGCAGGCATAATGACGAGCTAATCACACAACAAAATGAGTTTGGAAACACAGCTCTTCATGAGGCTGCAGCAACTGATTGTGTCCGTGTTGTGGAGAAGTTGTTGGAAAAGGCACCGGCATTGCTGTCCATTCCAAACGAGAATGGGGAAATGCCTCTCTATACAGCAGCTCACTTTGGCCAGAAAAAAAATTTCATTTTGTTGGCTGAAAAACTGAAAACCGATCAACATGCTCTTCATCCCCATTTGTTCTCCCTGTATCCTTCTAACGACCCTGTTACAAAAAGTGGGAAGTACTCCTACGACCCTGAACGCATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAGTTCTTTGAGCTTGCACTTTTGATAGCTAGAAAGCCGGAGTGTGCAAAAATTGTTCTACTAAAATACAAAAATTTGAAAACGCCTCTTCAGCTCCTCTCATCCAATTCTTCAGCATTCAAGAGTGGAATGAAATGTAGACTGATCAAGAGGTTCATTTACAACTGTGCTCAATACGAAGATGCTAAAGAGGAAGATGCTCACGAACAAAATTCCAGTGATGATAGTCATGTACAAAGTTCCAGTAAAGCCACTCTGTTTCTACGGCGAATCATGTCTTCAGTTAATAGATCAGTTTGGATTGTTCTGCGAGAATGGCCAACGATGAAGAAGATTCATGACGAAAGGAAGAGGCATGAACTTGCTTTAGAACTAGCCAAGTTTTTAATTGCAGAAGACTTTTCATGGCACATCAAAGCACCATCCCAGTCAGAGACTCCAGATATCCCATTGCTCATTGCAACAAGCAATGGAATATTAGAAATTGTGGAGGAGACACTTCGAGTCTACCCTTTGTCACTTGAGTATACAAACAAAGAGAAGCAAAACATACTGCACCTCGCTATAATGCACCGTCAGCCGGACATCTTTGATGTGACGAAGAGGTTTGATGTGACGAAGAGGTTAATGCCAAGGTTGGCTCGACAAACCGATAAGAATGGATTCACAATACTGCACCATGCTGGAGACATGAAATTTTATAAAGGAGGCACCCAGCCTGGTCCTGCATTTCAGTTGCAAGAAGAGTTAGAATGGTATGAGAGGGTGGAGAAGTTAGTCCCACGATATTATGCAAGGAATACTGCTGCTGAACAAAAAGAGACTCGAGAAGAGTTCTATAGTCGAAAATATACGGAAACTGTAAAGGAGTTGTCTCAGAACGCGGATAAGATAATTCCACCTAAATCTGTAAATAAGCTTGGCTGGGACGAAAGCAAAGAGGAGACCCCAAGACATCACCATGTTTGCGCTGTTGCAGTACCCGTTGTGGGAGGCCTTCAAAAGGACTGGAAAGTCCTCAGTCAAAGTCGTGAAAAGAATTCTTCCACGGCCACTTACCGAAACTGCTTGCTCAAAGGCCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

548

Amino Acids

62.73

Weight (kDa)

8.28

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_5 PF13857 74 - 122 9.1e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 78 - 140 6.9e-06 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1260
AasI GACNNNNNNGTC 1 cut(s) 1571
AccB1I GGYRCC 2 cut(s) 319, 1268
AccI GTMKAC 3 cut(s) 697, 1065, 1085
AccII CGCG 1 cut(s) 1442
AciI CCGC 1 cut(s) 1442
AcoI YGGCCR 3 cut(s) 385, 875, 1608
AcsI RAATTY 5 cut(s) 397, 631, 769, 1253, 1597
AcuI CTGAAG 3 cut(s) 632, 654, 822
AfaI GTAC 5 cut(s) 16, 503, 532, 792, 1539
AfiI CCNNNNNNNGG 5 cut(s) 157, 298, 1138, 1547, 1561
AgsI TTSAA 3 cut(s) 637, 679, 1559
AjnI CCWGG 1 cut(s) 1276
Alw21I GWGCWC 2 cut(s) 138, 730
Alw26I GTCTC 7 cut(s) 48, 986, 1046, 1239, 1373, 1437, 1496
Alw44I GTGCAC 1 cut(s) 134
AlwNI CAGNNNCTG 1 cut(s) 281
Ama87I CYCGRG 1 cut(s) 1383
AoxI GGCC 5 cut(s) 385, 875, 1552, 1608, 1636
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 5 cut(s) 272, 275, 374, 545, 1364
ApoI RAATTY 5 cut(s) 397, 631, 769, 1253, 1597
Asp700I GAANNNNTTC 1 cut(s) 1220
AspLEI GCGC 1 cut(s) 1529
AspS9I GGNCC 1 cut(s) 1280
AsuHPI GGTGA 4 cut(s) 71, 88, 152, 1508
AvaI CYCGRG 1 cut(s) 1383
AvaII GGWCC 1 cut(s) 1280
BaeGI GKGCMC 1 cut(s) 138
BalI TGGCCA 2 cut(s) 387, 877
BanI GGYRCC 2 cut(s) 319, 1268
BarI GAAGNNNNNNTAC 2 cut(s) 491, 523
BbsI GAAGAC 2 cut(s) 828, 960
Bbv12I GWGCWC 2 cut(s) 138, 730
BbvI GCAGC 5 cut(s) 259, 287, 386, 532, 1351
BccI CCATC 1 cut(s) 988
BceAI ACGGC 2 cut(s) 839, 1623
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 1 cut(s) 1278
BciVI GTATCC 1 cut(s) 477
BclI TGATCA 1 cut(s) 702
BcoDI GTCTC 7 cut(s) 48, 986, 1046, 1239, 1373, 1437, 1496
BfaI CTAG 2 cut(s) 588, 932
BfmI CTRYAG 2 cut(s) 273, 1396
BfuI GTATCC 1 cut(s) 477
BisI GCNGC 5 cut(s) 273, 276, 375, 546, 1365
BlsI GCNGC 5 cut(s) 274, 277, 376, 547, 1366
BmcAI AGTACT 1 cut(s) 503
Bme1390I CCNGG 1 cut(s) 1278
Bme18I GGWCC 1 cut(s) 1280
BmeT110I CYCGRG 1 cut(s) 1383
BmgT120I GGNCC 1 cut(s) 1280
BmiI GGNNCC 2 cut(s) 321, 1270
BmrFI CCNGG 1 cut(s) 1278
BmrI ACTGGG 1 cut(s) 979
BmsI GCATC 4 cut(s) 97, 192, 730, 745
BmuI ACTGGG 1 cut(s) 979
BpiI GAAGAC 2 cut(s) 828, 960
BpmI CTGGAG 2 cut(s) 981, 1263
BpuEI CTTGAG 1 cut(s) 1100
BsaAI YACGTR 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 1496
BsaJI CCNNGG 2 cut(s) 1190, 1605
BsaXI ACNNNNNCTCC 2 cut(s) 293, 323
Bsc4I CCNNNNNNNGG 5 cut(s) 157, 298, 1138, 1547, 1561
Bse118I RCCGGY 1 cut(s) 322
Bse1I ACTGG 4 cut(s) 774, 801, 985, 1571
Bse3DI GCAATG 4 cut(s) 326, 1007, 1014, 1033
BseBI CCWGG 1 cut(s) 1278
BseDI CCNNGG 2 cut(s) 1190, 1605
BseGI GGATG 3 cut(s) 445, 659, 980
BseLI CCNNNNNNNGG 5 cut(s) 157, 298, 1138, 1547, 1561
BseMI GCAATG 4 cut(s) 326, 1007, 1014, 1033
BseMII CTCAG 3 cut(s) 64, 1448, 1591
BseNI ACTGG 4 cut(s) 774, 801, 985, 1571
BseRI GAGGAG 3 cut(s) 644, 1064, 1514
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 5 cut(s) 259, 287, 386, 532, 1351
BseYI CCCAGC 2 cut(s) 1272, 1482
BsgI GTGCAG 2 cut(s) 1097, 1217
Bsh1236I CGCG 1 cut(s) 1442
BshFI GGCC 5 cut(s) 387, 877, 1554, 1610, 1638
BshNI GGYRCC 2 cut(s) 319, 1268
BsiHKAI GWGCWC 2 cut(s) 138, 730
BsiHKCI CYCGRG 1 cut(s) 1383
BsiSI CCGG 3 cut(s) 323, 596, 1139
BslFI GGGAC 2 cut(s) 1322, 1499
BslI CCNNNNNNNGG 5 cut(s) 157, 298, 1138, 1547, 1561
BsmAI GTCTC 7 cut(s) 48, 986, 1046, 1239, 1373, 1437, 1496
BsmBI CGTCTC 1 cut(s) 48
BsmFI GGGAC 2 cut(s) 1322, 1499
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 5 cut(s) 387, 877, 1554, 1610, 1638
Bso31I GGTCTC 1 cut(s) 1496
BsoBI CYCGRG 1 cut(s) 1383
Bsp1286I GDGCHC 2 cut(s) 138, 730
Bsp1407I TGTACA 1 cut(s) 790
Bsp143I GATC 3 cut(s) 430, 702, 848
BspACI CCGC 1 cut(s) 1442
BspANI GGCC 5 cut(s) 387, 877, 1554, 1610, 1638
BspCNI CTCAG 3 cut(s) 63, 1447, 1590
BspFNI CGCG 1 cut(s) 1442
BspHI TCATGA 2 cut(s) 265, 895
BspLI GGNNCC 2 cut(s) 321, 1270
BspMAI CTGCAG 1 cut(s) 277
BspQI GCTCTTC 2 cut(s) 267, 447
BspT107I GGYRCC 2 cut(s) 319, 1268
BspTNI GGTCTC 1 cut(s) 1496
BsrDI GCAATG 4 cut(s) 326, 1007, 1014, 1033
BsrFI RCCGGY 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 790
BsrI ACTGG 4 cut(s) 774, 801, 985, 1571
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 2 cut(s) 1190, 1605
BssMI GATC 3 cut(s) 430, 702, 848
BssNAI GTATAC 1 cut(s) 1086
BssT1I CCWWGG 1 cut(s) 1190
Bst1107I GTATAC 1 cut(s) 1086
Bst2UI CCWGG 1 cut(s) 1278
Bst4CI ACNGT 6 cut(s) 59, 133, 140, 725, 1133, 1420
Bst6I CTCTTC 8 cut(s) 267, 447, 651, 902, 1154, 1172, 1296, 1383
BstAPI GCANNNNNTGC 1 cut(s) 554
BstAUI TGTACA 1 cut(s) 790
BstBAI YACGTR 1 cut(s) 14
BstC8I GCNNGC 3 cut(s) 212, 573, 1628
BstDEI CTNAG 3 cut(s) 50, 1434, 1577
BstDSI CCRYGG 1 cut(s) 1605
BstENI CCTNNNNNAGG 1 cut(s) 1559
BstF5I GGATG 3 cut(s) 445, 659, 980
BstFNI CGCG 1 cut(s) 1442
BstHHI GCGC 1 cut(s) 1529
BstKTI GATC 3 cut(s) 433, 705, 851
BstMAI GTCTC 7 cut(s) 48, 986, 1046, 1239, 1373, 1437, 1496
BstMBI GATC 3 cut(s) 430, 702, 848
BstMWI GCNNNNNNNGC 4 cut(s) 554, 649, 874, 1135
BstNI CCWGG 1 cut(s) 1278
BstNSI RCATGY 2 cut(s) 440, 557
BstSCI CCNGG 1 cut(s) 1276
BstSFI CTRYAG 2 cut(s) 273, 1396
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 14
BstUI CGCG 1 cut(s) 1442
BstV1I GCAGC 5 cut(s) 259, 287, 386, 532, 1351
BstV2I GAAGAC 2 cut(s) 828, 960
BstZ17I GTATAC 1 cut(s) 1086
BsuI GTATCC 1 cut(s) 477
BsuRI GGCC 5 cut(s) 387, 877, 1554, 1610, 1638
BtgI CCRYGG 1 cut(s) 1605
BtgZI GCGATG 1 cut(s) 169
BtsCI GGATG 3 cut(s) 445, 659, 980
BtsIMutI CAGTG 2 cut(s) 138, 781
Cac8I GCNNGC 3 cut(s) 212, 573, 1628
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 2 cut(s) 265, 895
CfoI GCGC 1 cut(s) 1529
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 1 cut(s) 1280
Csp6I GTAC 5 cut(s) 15, 502, 531, 791, 1538
CviQI GTAC 5 cut(s) 15, 502, 531, 791, 1538
DdeI CTNAG 3 cut(s) 50, 1434, 1577
DpnI GATC 3 cut(s) 432, 704, 850
DpnII GATC 3 cut(s) 430, 702, 848
DrdI GACNNNNNNGTC 1 cut(s) 1571
DseDI GACNNNNNNGTC 1 cut(s) 1571
EaeI YGGCCR 3 cut(s) 385, 875, 1608
Eam1104I CTCTTC 8 cut(s) 267, 447, 651, 902, 1154, 1172, 1296, 1383
EarI CTCTTC 8 cut(s) 267, 447, 651, 902, 1154, 1172, 1296, 1383
Eco105I TACGTA 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 1190
Eco147I AGGCCT 1 cut(s) 1554
Eco31I GGTCTC 1 cut(s) 1496
Eco32I GATATC 1 cut(s) 1003
Eco47I GGWCC 1 cut(s) 1280
Eco57I CTGAAG 3 cut(s) 632, 654, 822
Eco88I CYCGRG 1 cut(s) 1383
EcoNI CCTNNNNNAGG 1 cut(s) 1559
EcoRI GAATTC 1 cut(s) 1597
EcoRII CCWGG 1 cut(s) 1276
EcoRV GATATC 1 cut(s) 1003
EcoT14I CCWWGG 1 cut(s) 1190
ErhI CCWWGG 1 cut(s) 1190
Esp3I CGTCTC 1 cut(s) 48
FaqI GGGAC 2 cut(s) 1322, 1499
FauNDI CATATG 1 cut(s) 156
FbaI TGATCA 1 cut(s) 702
FblI GTMKAC 3 cut(s) 697, 1065, 1085
Fnu4HI GCNGC 5 cut(s) 273, 276, 375, 546, 1365
FokI GGATG 3 cut(s) 432, 646, 967
Fsp4HI GCNGC 5 cut(s) 273, 276, 375, 546, 1365
FspBI CTAG 2 cut(s) 588, 932
GlaI GCGC 1 cut(s) 1528
GluI GCNGC 5 cut(s) 273, 276, 375, 546, 1365
GsaI CCCAGC 2 cut(s) 1276, 1486
GsuI CTGGAG 2 cut(s) 981, 1263
HaeIII GGCC 5 cut(s) 387, 877, 1554, 1610, 1638
HapII CCGG 3 cut(s) 323, 596, 1139
HhaI GCGC 1 cut(s) 1529
Hin6I GCGC 1 cut(s) 1527
HinP1I GCGC 1 cut(s) 1527
HindIII AAGCTT 2 cut(s) 81, 1475
HinfI GANTC 7 cut(s) 195, 828, 892, 994, 1062, 1221, 1381
HpaII CCGG 3 cut(s) 323, 596, 1139
HphI GGTGA 4 cut(s) 71, 88, 152, 1508
Hpy166II GTNNAC 4 cut(s) 136, 698, 1066, 1086
Hpy188I TCNGA 4 cut(s) 22, 53, 991, 1437
Hpy188III TCNNGA 9 cut(s) 104, 266, 679, 706, 761, 896, 998, 1385, 1589
Hpy8I GTNNAC 4 cut(s) 136, 698, 1066, 1086
HpyAV CCTTC 2 cut(s) 480, 1565
HpyCH4III ACNGT 6 cut(s) 59, 133, 140, 725, 1133, 1420
HpyCH4IV ACGT 1 cut(s) 13
HpyF10VI GCNNNNNNNGC 4 cut(s) 554, 649, 874, 1135
HpyF3I CTNAG 3 cut(s) 50, 1434, 1577
HpySE526I ACGT 1 cut(s) 13
HspAI GCGC 1 cut(s) 1527
Ksp22I TGATCA 1 cut(s) 702
Kzo9I GATC 3 cut(s) 430, 702, 848
LguI GCTCTTC 2 cut(s) 267, 447
LmnI GCTCC 2 cut(s) 172, 657
Lsp1109I GCAGC 5 cut(s) 259, 287, 386, 532, 1351
LweI GCATC 4 cut(s) 97, 192, 730, 745
MaeI CTAG 2 cut(s) 588, 932
MaeII ACGT 1 cut(s) 13
MaeIII GTNAC 5 cut(s) 140, 484, 1074, 1153, 1171
MalI GATC 3 cut(s) 432, 704, 850
MboI GATC 3 cut(s) 430, 702, 848
MhlI GDGCHC 2 cut(s) 138, 730
MlsI TGGCCA 2 cut(s) 387, 877
MluNI TGGCCA 2 cut(s) 387, 877
MlyI GAGTC 3 cut(s) 988, 1071, 1375
MmeI TCCRAC 2 cut(s) 152, 291
Mox20I TGGCCA 2 cut(s) 387, 877
MroXI GAANNNNTTC 1 cut(s) 1220
MscI TGGCCA 2 cut(s) 387, 877
MseI TTAA 4 cut(s) 116, 843, 944, 1184
MslI CAYNNNNRTG 1 cut(s) 1518
Msp20I TGGCCA 2 cut(s) 387, 877
MspI CCGG 3 cut(s) 323, 596, 1139
MspR9I CCNGG 1 cut(s) 1278
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 1 cut(s) 1278
MvnI CGCG 1 cut(s) 1442
MwoI GCNNNNNNNGC 4 cut(s) 554, 649, 874, 1135
NdeI CATATG 1 cut(s) 156
NdeII GATC 3 cut(s) 430, 702, 848
NlaIV GGNNCC 2 cut(s) 321, 1270
NmeAIII GCCGAG 1 cut(s) 583
NmuCI GTSAC 4 cut(s) 140, 1074, 1153, 1171
NspI RCATGY 2 cut(s) 440, 557
PaeR7I CTCGAG 1 cut(s) 1383
PagI TCATGA 2 cut(s) 265, 895
PceI AGGCCT 1 cut(s) 1554
PciSI GCTCTTC 2 cut(s) 267, 447
PctI GAATGC 1 cut(s) 674
PdmI GAANNNNTTC 1 cut(s) 1220
PfeI GAWTC 4 cut(s) 195, 828, 892, 1221
PkrI GCNGC 5 cut(s) 274, 277, 376, 547, 1366
PleI GAGTC 3 cut(s) 988, 1070, 1375
PpsI GAGTC 3 cut(s) 988, 1070, 1375
Ppu21I YACGTR 1 cut(s) 14
PsiI TTATAA 1 cut(s) 1260
Psp6I CCWGG 1 cut(s) 1276
PspFI CCCAGC 2 cut(s) 1272, 1482
PspGI CCWGG 1 cut(s) 1276
PspN4I GGNNCC 2 cut(s) 321, 1270
PspPI GGNCC 1 cut(s) 1280
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 281
RsaI GTAC 5 cut(s) 16, 503, 532, 792, 1539
RsaNI GTAC 5 cut(s) 15, 502, 531, 791, 1538
RseI CAYNNNNRTG 1 cut(s) 1518
SapI GCTCTTC 2 cut(s) 267, 447
SaqAI TTAA 4 cut(s) 116, 843, 944, 1184
SatI GCNGC 5 cut(s) 273, 276, 375, 546, 1365
Sau3AI GATC 3 cut(s) 430, 702, 848
Sau96I GGNCC 1 cut(s) 1280
ScaI AGTACT 1 cut(s) 503
SchI GAGTC 3 cut(s) 988, 1071, 1375
ScrFI CCNGG 1 cut(s) 1278
SduI GDGCHC 2 cut(s) 138, 730
SfaNI GCATC 4 cut(s) 97, 192, 730, 745
SfcI CTRYAG 2 cut(s) 273, 1396
Sfr274I CTCGAG 1 cut(s) 1383
SinI GGWCC 1 cut(s) 1280
SlaI CTCGAG 1 cut(s) 1383
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 2 cut(s) 1079, 1383
SmoI CTYRAG 2 cut(s) 1079, 1383
SnaBI TACGTA 1 cut(s) 14
SseBI AGGCCT 1 cut(s) 1554
SsiI CCGC 1 cut(s) 1442
SspI AATATT 1 cut(s) 1035
SspMI CTAG 2 cut(s) 588, 932
StuI AGGCCT 1 cut(s) 1554
StyD4I CCNGG 1 cut(s) 1276
StyI CCWWGG 1 cut(s) 1190
TaaI ACNGT 6 cut(s) 59, 133, 140, 725, 1133, 1420
TaiI ACGT 1 cut(s) 16
TaqI TCGA 6 cut(s) 29, 201, 1060, 1201, 1384, 1402
TatI WGTACW 2 cut(s) 501, 790
TfiI GAWTC 4 cut(s) 195, 828, 892, 1221
Tru1I TTAA 4 cut(s) 116, 843, 944, 1184
Tru9I TTAA 4 cut(s) 116, 843, 944, 1184
TscAI CASTG 2 cut(s) 138, 781
TseFI GTSAC 4 cut(s) 140, 1074, 1153, 1171
TseI GCWGC 5 cut(s) 272, 275, 374, 545, 1364
Tsp45I GTSAC 4 cut(s) 140, 1074, 1153, 1171
TspGWI ACGGA 2 cut(s) 281, 1427
TspRI CASTG 2 cut(s) 138, 781
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 1 cut(s) 1280
XagI CCTNNNNNAGG 1 cut(s) 1559
XapI RAATTY 5 cut(s) 397, 631, 769, 1253, 1597
XceI RCATGY 2 cut(s) 440, 557
XhoI CTCGAG 1 cut(s) 1383
XmiI GTMKAC 3 cut(s) 697, 1065, 1085
XmnI GAANNNNTTC 1 cut(s) 1220
XspI CTAG 2 cut(s) 588, 932
ZrmI AGTACT 1 cut(s) 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.