Rw5G001450

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000724
Physical Location & Seq
Reverse (-)
1217737 .. 1222602
4866 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G001450.1

Sequence Viewer

Length: 2184 bp
ATGGAAGAAATACGTATTTCCGAACAATCCAAACCCCTCTTTCAAAGCCTCAGAGACGGTGATGTATTAGAAGTGGTGAAAGCTTATGCAAAAGCTACTACTCTTGATGCAAGATTAAAGCTAATTCCAACAGTGCACGACGACACAATCCTCCATGTGGCGATTTACATGGGGCAAGAAAGCATCGCAATAGGAATCATCGAAATAAGCAGGCATAATGACGAGCTAATTAAAAAACGCAATGCGTTTGGAAACACAGCTCTTCATGAGGCTGCAGCAGCTGATTTTGTACGTGTTGTGGAGAAGTTGTTGGAAAAGGCACCGGCATTGCTGTCCATTCCAAACAAGAAAGGGGAAATGCCTCTCTATACAGCAGCTCACTTTGGCCAGAAAAAAATTTTCATTTTGCTGGCTGAAAAACTAAAAAACAATCATTGTGATCTTCGTCCTCATTTCTGCTCCCTATCTCCTTCCTACAAGTCTGTTGAAGAACTTGACGAGCACTCCTACGGCCCTGAACACATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAGTTCTTTGAGCTTGCACTTTTGATAGCTAGAAAGCCGGAGTATGCGAAGATTGTTCGACTAAAAGACAAAAATTTGAAGACGCCTCTTCAGCTCCTCTCATCCAATTCTTCAGCATTCGAGAGTGGAATGAAATGTGGATTGATCAAGAGGTTCATTCACAACTGTGCTCCATATGAAGATGCTCATGAACAAAATTCCAATGATGATAGTCATGTTCAAAGTTCCGAAAGATCATCAGCTACTCTGTTTCTAAGGCGAGTCTTCTCTTCAGTTAATAGATCGGTTTGGATTGTTCTTCGAGCATGGAGTACGATGAGGAGCATCTACGACGAAAAGAAGAGGCATGGATTGGCTTTAGAACTAGCCACGTTTCTAATTGCAGCAGACTTTTCATGGGACATCACACGACTAGCATTAAATGAAAGTATGATGCAGACTGCTGTGGGACTCCCATTCCCAGATTCCGAAGACTCAGGTGGTTTCAGTATCACTAGCACTGAAGACCCCTCCGCTCCATCCCTGGAAAAGAGTAATCAACCAGCTATCCCATTGCACATTGCAACAGAGCATGGAATATTAGAAATTGTGAAGGAGACTCTTAGAGTCCACCCTGCGGCATACGAGTATAGAAATACCAAGGGACAAAACATACTGCACCTGTCCATTATGCACCGTCAGCGGGACATCTTTGATCTTGTAATGAAGAAGGAGACACCTAAGTCGAGGTTGCAACGACAACTCGATATTAATGACTTCACAGTATTGCACCAAGTTGGCAACATAGAGCATTACAATGGAGGTACCCAGCCTGGTCCTGCACTCCAATTGCAAGAAGAGCTAGAGTGGTTCGAGAAGGTGGAGGGGTTAATCCCACTACATTATGAAAAATTCAGTGCTTGTGAGGCAGGCAAAGACACCACCCTACAGTCCTTTCATAAAAGATATGTAGAGATTCTCAAGGACTTGTCTGAGAACATTGAAGTGGATAAGATAATAACACCCGATTCTCACAAGGAAGAAAAGAAAAAGGAGACCCCCATAGAGTACTTTCGTCGCACACATGATCCGCTTCTCCAGAGCGCACAAGAATGGCTGAAGCGGACCTCCGAGTCGTGCTCGACGGTGGCCGGACTAATGGCCACCGTCGCCTTCGCAGCCGCCTTCACCCTCCCCGGAGGCAACGACGAGAACAGCGGCACTCCACGCCTTCTTCACAGCCCTTTCTTCTTAGTCTTCATCATTACCGACGCTCTCTCCCTAGCCAGCTCGCTGACATCACTCGTCATGTTCCTCTCGATCCTGACGTCACCGTTCGAGATGGACGACTTCCGCCACTCTCTCCCTCGGAAGCTGATCCTCGGCTTCACCTTCCTCTTCATCTCGGTGGCGGTGACCATGCTGGCCTTTGCGTCCACACTGATGCTGACAATTCCGATGAAGAAGAGAGTGACCAAAAGTTTTGTGTACTGCGTTGCGTTTCTTCCCGTCACCATGTTTGCACTGTTGCAATTCCCGTTGTTGTTGGCCTTCAAAAAGAGTCTCAAGTACCCAGTCATGGCCATGAAAAGAGTATGGCGGCTTCTTATCTCTGCTTCTATCTTGAAAAGCGACAAGACCCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

727

Amino Acids

82.18

Weight (kDa)

7.41

Isoelectric Point (pI)

51.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 78 - 140 3.1e-06 Ankyrin repeats (3 copies)
PGG PF13962 550 - 662 3e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1279, 1669
AatII GACGTC 1 cut(s) 1868
Acc65I GGTACC 1 cut(s) 1361
AccB1I GGYRCC 2 cut(s) 319, 1361
AccBSI CCGCTC 1 cut(s) 1073
AclWI GGATC 3 cut(s) 1619, 1852, 1909
AcoI YGGCCR 4 cut(s) 385, 1686, 1698, 2118
AcsI RAATTY 4 cut(s) 396, 631, 754, 1448
AcuI CTGAAG 5 cut(s) 632, 654, 813, 1080, 1676
AcyI GRCGYC 2 cut(s) 641, 1865
AfaI GTAC 7 cut(s) 291, 532, 871, 1363, 1607, 2027, 2108
AfiI CCNNNNNNNGG 4 cut(s) 157, 1174, 1240, 2116
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 7 cut(s) 44, 488, 637, 779, 1541, 2092, 2164
AjnI CCWGG 2 cut(s) 1080, 1369
AleI CACNNNNGTG 1 cut(s) 723
Alw21I GWGCWC 4 cut(s) 138, 504, 730, 1679
Alw26I GTCTC 5 cut(s) 48, 1148, 1265, 1586, 2105
Alw44I GTGCAC 1 cut(s) 134
AlwI GGATC 3 cut(s) 1619, 1852, 1909
AlwNI CAGNNNCTG 1 cut(s) 281
AoxI GGCC 7 cut(s) 385, 511, 1686, 1698, 1962, 2085, 2118
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 7 cut(s) 272, 275, 278, 374, 545, 941, 1715
ApoI RAATTY 4 cut(s) 396, 631, 754, 1448
AseI ATTAAT 1 cut(s) 1308
Asp718I GGTACC 1 cut(s) 1361
AspLEI GCGC 1 cut(s) 1643
AspS9I GGNCC 3 cut(s) 512, 1373, 1662
AsuC2I CCSGG 1 cut(s) 1734
AsuHPI GGTGA 7 cut(s) 71, 88, 1717, 1860, 1918, 1963, 2041
AvaII GGWCC 2 cut(s) 1373, 1662
BaeGI GKGCMC 1 cut(s) 138
BalI TGGCCA 3 cut(s) 387, 1700, 2120
BanI GGYRCC 2 cut(s) 319, 1361
BarI GAAGNNNNNNTAC 2 cut(s) 2124, 2156
BbsI GAAGAC 5 cut(s) 644, 814, 1035, 1068, 1786
Bbv12I GWGCWC 4 cut(s) 138, 504, 730, 1679
BbvI GCAGC 7 cut(s) 259, 287, 290, 386, 532, 953, 1727
BccI CCATC 2 cut(s) 1084, 1873
BceAI ACGGC 1 cut(s) 526
BciT130I CCWGG 2 cut(s) 1082, 1371
BclI TGATCA 1 cut(s) 702
BcnI CCSGG 1 cut(s) 1734
BcoDI GTCTC 5 cut(s) 48, 1148, 1265, 1586, 2105
BfaI CTAG 6 cut(s) 588, 923, 971, 1053, 1400, 1820
BfmI CTRYAG 2 cut(s) 273, 1484
BmcAI AGTACT 1 cut(s) 1607
Bme1390I CCNGG 3 cut(s) 1082, 1371, 1734
Bme18I GGWCC 2 cut(s) 1373, 1662
BmgT120I GGNCC 3 cut(s) 512, 1373, 1662
BmiI GGNNCC 2 cut(s) 321, 1363
BmrFI CCNGG 3 cut(s) 1082, 1371, 1734
BmrI ACTGGG 1 cut(s) 2105
BmsI GCATC 6 cut(s) 97, 192, 730, 891, 981, 1971
BmuI ACTGGG 1 cut(s) 2105
BpiI GAAGAC 5 cut(s) 644, 814, 1035, 1068, 1786
BplI GAGNNNNNCTC 2 cut(s) 1661, 1693
BpmI CTGGAG 1 cut(s) 1619
BpuEI CTTGAG 2 cut(s) 1502, 2087
BpuMI CCSGG 1 cut(s) 1734
BsaAI YACGTR 2 cut(s) 14, 293
BsaHI GRCGYC 2 cut(s) 641, 1865
BsaI GGTCTC 1 cut(s) 1586
BsaJI CCNNGG 5 cut(s) 1080, 1197, 1732, 1904, 1918
BsaXI ACNNNNNCTCC 6 cut(s) 293, 323, 488, 518, 1799, 1829
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 1174, 1240, 2116
Bse118I RCCGGY 1 cut(s) 322
Bse1I ACTGG 1 cut(s) 2111
Bse3DI GCAATG 4 cut(s) 247, 326, 1109, 1116
BseBI CCWGG 2 cut(s) 1082, 1371
BseDI CCNNGG 5 cut(s) 1080, 1197, 1732, 1904, 1918
BseGI GGATG 2 cut(s) 659, 1076
BseLI CCNNNNNNNGG 4 cut(s) 157, 1174, 1240, 2116
BseMI GCAATG 4 cut(s) 247, 326, 1109, 1116
BseMII CTCAG 3 cut(s) 64, 1047, 1521
BseNI ACTGG 1 cut(s) 2111
BseRI GAGGAG 2 cut(s) 644, 892
BseSI GKGCMC 1 cut(s) 138
BseXI GCAGC 7 cut(s) 259, 287, 290, 386, 532, 953, 1727
BseYI CCCAGC 1 cut(s) 1365
BsgI GTGCAG 2 cut(s) 1199, 1362
BshFI GGCC 7 cut(s) 387, 513, 1688, 1700, 1964, 2087, 2120
BshNI GGYRCC 2 cut(s) 319, 1361
BsiHKAI GWGCWC 4 cut(s) 138, 504, 730, 1679
BsiSI CCGG 4 cut(s) 323, 596, 1689, 1734
BslFI GGGAC 4 cut(s) 971, 1020, 1215, 1256
BslI CCNNNNNNNGG 4 cut(s) 157, 1174, 1240, 2116
BsmAI GTCTC 5 cut(s) 48, 1148, 1265, 1586, 2105
BsmBI CGTCTC 1 cut(s) 48
BsmFI GGGAC 4 cut(s) 971, 1020, 1215, 1256
BsmI GAATGC 1 cut(s) 674
BsnI GGCC 7 cut(s) 387, 513, 1688, 1700, 1964, 2087, 2120
Bso31I GGTCTC 1 cut(s) 1586
Bsp1286I GDGCHC 4 cut(s) 138, 504, 730, 1679
Bsp143I GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
BspANI GGCC 7 cut(s) 387, 513, 1688, 1700, 1964, 2087, 2120
BspCNI CTCAG 3 cut(s) 63, 1046, 1522
BspHI TCATGA 2 cut(s) 265, 745
BspLI GGNNCC 2 cut(s) 321, 1363
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 3 cut(s) 1619, 1852, 1909
BspQI GCTCTTC 2 cut(s) 267, 1389
BspT107I GGYRCC 2 cut(s) 319, 1361
BspTNI GGTCTC 1 cut(s) 1586
BsrBI CCGCTC 1 cut(s) 1073
BsrDI GCAATG 4 cut(s) 247, 326, 1109, 1116
BsrFI RCCGGY 1 cut(s) 322
BsrI ACTGG 1 cut(s) 2111
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 5 cut(s) 1080, 1197, 1732, 1904, 1918
BssMI GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
BssNI GRCGYC 2 cut(s) 641, 1865
BssT1I CCWWGG 1 cut(s) 1197
Bst2UI CCWGG 2 cut(s) 1082, 1371
Bst6I CTCTTC 7 cut(s) 267, 651, 832, 893, 1389, 1940, 1997
BstACI GRCGYC 2 cut(s) 641, 1865
BstAPI GCANNNNNTGC 1 cut(s) 554
BstBAI YACGTR 2 cut(s) 14, 293
BstC8I GCNNGC 7 cut(s) 212, 411, 573, 1468, 1825, 1829, 1962
BstDEI CTNAG 7 cut(s) 50, 812, 1033, 1160, 1278, 1530, 1789
BstEII GGTNACC 1 cut(s) 1951
BstF5I GGATG 2 cut(s) 659, 1076
BstHHI GCGC 1 cut(s) 1643
BstKTI GATC 8 cut(s) 442, 705, 794, 842, 1255, 1627, 1860, 1917
BstMAI GTCTC 5 cut(s) 48, 1148, 1265, 1586, 2105
BstMBI GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
BstMWI GCNNNNNNNGC 9 cut(s) 278, 554, 649, 1237, 1396, 1463, 1706, 1715, 1764
BstNI CCWGG 2 cut(s) 1082, 1371
BstNSI RCATGY 1 cut(s) 557
BstPI GGTNACC 1 cut(s) 1951
BstSCI CCNGG 3 cut(s) 1080, 1369, 1732
BstSFI CTRYAG 2 cut(s) 273, 1484
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 14
BstV1I GCAGC 7 cut(s) 259, 287, 290, 386, 532, 953, 1727
BstV2I GAAGAC 5 cut(s) 644, 814, 1035, 1068, 1786
BsuRI GGCC 7 cut(s) 387, 513, 1688, 1700, 1964, 2087, 2120
BtgZI GCGATG 1 cut(s) 169
BtsCI GGATG 2 cut(s) 659, 1076
BtsIMutI CAGTG 5 cut(s) 138, 1056, 1459, 1976, 2060
Cac8I GCNNGC 7 cut(s) 212, 411, 573, 1468, 1825, 1829, 1962
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 2 cut(s) 265, 745
CfoI GCGC 1 cut(s) 1643
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 3 cut(s) 512, 1373, 1662
CseI GACGC 3 cut(s) 649, 1817, 1959
Csp6I GTAC 7 cut(s) 290, 531, 870, 1362, 1606, 2026, 2107
CviQI GTAC 7 cut(s) 290, 531, 870, 1362, 1606, 2026, 2107
DdeI CTNAG 7 cut(s) 50, 812, 1033, 1160, 1278, 1530, 1789
DpnI GATC 8 cut(s) 441, 704, 793, 841, 1254, 1626, 1859, 1916
DpnII GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
DrdI GACNNNNNNGTC 2 cut(s) 1279, 1669
DseDI GACNNNNNNGTC 2 cut(s) 1279, 1669
EaeI YGGCCR 4 cut(s) 385, 1686, 1698, 2118
Eam1104I CTCTTC 7 cut(s) 267, 651, 832, 893, 1389, 1940, 1997
EarI CTCTTC 7 cut(s) 267, 651, 832, 893, 1389, 1940, 1997
EciI GGCGGA 1 cut(s) 1880
Eco105I TACGTA 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 1197
Eco31I GGTCTC 1 cut(s) 1586
Eco47I GGWCC 2 cut(s) 1373, 1662
Eco57I CTGAAG 5 cut(s) 632, 654, 813, 1080, 1676
Eco91I GGTNACC 1 cut(s) 1951
EcoO65I GGTNACC 1 cut(s) 1951
EcoRII CCWGG 2 cut(s) 1080, 1369
EcoT14I CCWWGG 1 cut(s) 1197
ErhI CCWWGG 1 cut(s) 1197
Esp3I CGTCTC 1 cut(s) 48
FaqI GGGAC 4 cut(s) 971, 1020, 1215, 1256
FauI CCCGC 1 cut(s) 1233
FauNDI CATATG 1 cut(s) 733
FbaI TGATCA 1 cut(s) 702
FokI GGATG 2 cut(s) 646, 1063
FspBI CTAG 6 cut(s) 588, 923, 971, 1053, 1400, 1820
GlaI GCGC 1 cut(s) 1642
GsaI CCCAGC 1 cut(s) 1369
GsuI CTGGAG 1 cut(s) 1619
HaeIII GGCC 7 cut(s) 387, 513, 1688, 1700, 1964, 2087, 2120
HapII CCGG 4 cut(s) 323, 596, 1689, 1734
HgaI GACGC 3 cut(s) 649, 1817, 1959
HhaI GCGC 1 cut(s) 1643
Hin1I GRCGYC 2 cut(s) 641, 1865
Hin6I GCGC 1 cut(s) 1641
HinP1I GCGC 1 cut(s) 1641
HindIII AAGCTT 1 cut(s) 81
HpaII CCGG 4 cut(s) 323, 596, 1689, 1734
HphI GGTGA 7 cut(s) 71, 88, 1717, 1860, 1918, 1963, 2041
Hpy166II GTNNAC 4 cut(s) 136, 1168, 1974, 2026
Hpy188I TCNGA 8 cut(s) 22, 53, 787, 1027, 1531, 1669, 1908, 1995
Hpy8I GTNNAC 4 cut(s) 136, 1168, 1974, 2026
Hpy99I CGWCG 7 cut(s) 143, 893, 1617, 1684, 1709, 1748, 1811
HpyAV CCTTC 9 cut(s) 480, 1144, 1261, 1408, 1720, 1732, 1778, 1939, 2098
HpyCH4IV ACGT 4 cut(s) 13, 292, 929, 1865
HpyF10VI GCNNNNNNNGC 9 cut(s) 278, 554, 649, 1237, 1396, 1463, 1706, 1715, 1764
HpyF3I CTNAG 7 cut(s) 50, 812, 1033, 1160, 1278, 1530, 1789
HpySE526I ACGT 4 cut(s) 13, 292, 929, 1865
Hsp92I GRCGYC 2 cut(s) 641, 1865
HspAI GCGC 1 cut(s) 1641
KpnI GGTACC 1 cut(s) 1365
Ksp22I TGATCA 1 cut(s) 702
Kzo9I GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
LguI GCTCTTC 2 cut(s) 267, 1389
LmnI GCTCC 5 cut(s) 464, 657, 733, 879, 1078
Lsp1109I GCAGC 7 cut(s) 259, 287, 290, 386, 532, 953, 1727
LweI GCATC 6 cut(s) 97, 192, 730, 891, 981, 1971
MaeI CTAG 6 cut(s) 588, 923, 971, 1053, 1400, 1820
MaeII ACGT 4 cut(s) 13, 292, 929, 1865
MaeIII GTNAC 4 cut(s) 1866, 1951, 2008, 2047
MalI GATC 8 cut(s) 441, 704, 793, 841, 1254, 1626, 1859, 1916
MbiI CCGCTC 1 cut(s) 1073
MboI GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
MfeI CAATTG 1 cut(s) 1385
MhlI GDGCHC 4 cut(s) 138, 504, 730, 1679
MlsI TGGCCA 3 cut(s) 387, 1700, 2120
MluNI TGGCCA 3 cut(s) 387, 1700, 2120
MlyI GAGTC 7 cut(s) 828, 1002, 1025, 1150, 1173, 1679, 2107
MmeI TCCRAC 2 cut(s) 152, 291
Mox20I TGGCCA 3 cut(s) 387, 1700, 2120
MscI TGGCCA 3 cut(s) 387, 1700, 2120
MseI TTAA 6 cut(s) 116, 231, 834, 977, 1308, 1427
MslI CAYNNNNRTG 7 cut(s) 723, 1353, 1541, 1648, 1943, 1979, 2120
Msp20I TGGCCA 3 cut(s) 387, 1700, 2120
MspA1I CMGCKG 3 cut(s) 281, 1240, 1755
MspI CCGG 4 cut(s) 323, 596, 1689, 1734
MspR9I CCNGG 3 cut(s) 1082, 1371, 1734
MunI CAATTG 1 cut(s) 1385
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 2 cut(s) 1082, 1371
MwoI GCNNNNNNNGC 9 cut(s) 278, 554, 649, 1237, 1396, 1463, 1706, 1715, 1764
NciI CCSGG 1 cut(s) 1734
NdeI CATATG 1 cut(s) 733
NdeII GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
NlaIV GGNNCC 2 cut(s) 321, 1363
NmeAIII GCCGAG 2 cut(s) 583, 1899
NmuCI GTSAC 4 cut(s) 1866, 1951, 2008, 2047
NspI RCATGY 1 cut(s) 557
OliI CACNNNNGTG 1 cut(s) 723
PagI TCATGA 2 cut(s) 265, 745
PciSI GCTCTTC 2 cut(s) 267, 1389
PcsI WCGNNNNNNNCGW 2 cut(s) 1862, 1881
PctI GAATGC 1 cut(s) 674
PfeI GAWTC 4 cut(s) 195, 1022, 1513, 1565
PleI GAGTC 7 cut(s) 827, 1002, 1025, 1150, 1172, 1678, 2106
PpsI GAGTC 7 cut(s) 827, 1002, 1025, 1150, 1172, 1678, 2106
Ppu21I YACGTR 2 cut(s) 14, 293
PshBI ATTAAT 1 cut(s) 1308
Psp6I CCWGG 2 cut(s) 1080, 1369
PspEI GGTNACC 1 cut(s) 1951
PspFI CCCAGC 1 cut(s) 1365
PspGI CCWGG 2 cut(s) 1080, 1369
PspN4I GGNNCC 2 cut(s) 321, 1363
PspPI GGNCC 3 cut(s) 512, 1373, 1662
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 1 cut(s) 281
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 7 cut(s) 291, 532, 871, 1363, 1607, 2027, 2108
RsaNI GTAC 7 cut(s) 290, 531, 870, 1362, 1606, 2026, 2107
RseI CAYNNNNRTG 7 cut(s) 723, 1353, 1541, 1648, 1943, 1979, 2120
SapI GCTCTTC 2 cut(s) 267, 1389
SaqAI TTAA 6 cut(s) 116, 231, 834, 977, 1308, 1427
Sau3AI GATC 8 cut(s) 439, 702, 791, 839, 1252, 1624, 1857, 1914
Sau96I GGNCC 3 cut(s) 512, 1373, 1662
ScaI AGTACT 1 cut(s) 1607
SchI GAGTC 7 cut(s) 828, 1002, 1025, 1150, 1173, 1679, 2107
ScrFI CCNGG 3 cut(s) 1082, 1371, 1734
SduI GDGCHC 4 cut(s) 138, 504, 730, 1679
SfaNI GCATC 6 cut(s) 97, 192, 730, 891, 981, 1971
SfcI CTRYAG 2 cut(s) 273, 1484
SinI GGWCC 2 cut(s) 1373, 1662
SmiMI CAYNNNNRTG 7 cut(s) 723, 1353, 1541, 1648, 1943, 1979, 2120
SmlI CTYRAG 2 cut(s) 1517, 2102
SmoI CTYRAG 2 cut(s) 1517, 2102
SnaBI TACGTA 1 cut(s) 14
SspI AATATT 1 cut(s) 1137
SspMI CTAG 6 cut(s) 588, 923, 971, 1053, 1400, 1820
StyD4I CCNGG 3 cut(s) 1080, 1369, 1732
StyI CCWWGG 1 cut(s) 1197
TaiI ACGT 4 cut(s) 16, 295, 932, 1868
TatI WGTACW 2 cut(s) 1605, 2025
TauI GCSGC 4 cut(s) 1178, 1721, 1758, 2140
TfiI GAWTC 4 cut(s) 195, 1022, 1513, 1565
Tru1I TTAA 6 cut(s) 116, 231, 834, 977, 1308, 1427
Tru9I TTAA 6 cut(s) 116, 231, 834, 977, 1308, 1427
TscAI CASTG 5 cut(s) 138, 1063, 1459, 1983, 2067
TseFI GTSAC 4 cut(s) 1866, 1951, 2008, 2047
TseI GCWGC 7 cut(s) 272, 275, 278, 374, 545, 941, 1715
Tsp45I GTSAC 4 cut(s) 1866, 1951, 2008, 2047
TspRI CASTG 5 cut(s) 138, 1063, 1459, 1983, 2067
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 2 cut(s) 1373, 1662
VspI ATTAAT 1 cut(s) 1308
XapI RAATTY 4 cut(s) 396, 631, 754, 1448
XceI RCATGY 1 cut(s) 557
XspI CTAG 6 cut(s) 588, 923, 971, 1053, 1400, 1820
ZraI GACGTC 1 cut(s) 1866
ZrmI AGTACT 1 cut(s) 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.