RchiOBHm_Chr5g0001921

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000724
Physical Location & Seq
Forward (+)
1092588 .. 1095150
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28330

Sequence Viewer

Length: 1761 bp
ATGGCGATTTACATGGAGCAAGAAAGCATCGCAATAGGAATCATCGAAATAAGCAGGCATAATGACGAGCTAATCACACAACAAAATGAGTTTGGAAACACTGCTCTTCATGAGGCTGCAGCAATTGATTGTGTACGTGTTGTGGAGAAGTTGTTGGAAAAGGCACCGGCATTGCTGTCCATTCCAAACGAGAATGGGGAAATGCCTCTCTATACAGCAGCTCACTTTGGCCAGAAAAAAAATTTCATTTTGCTGGCTGAAAAACTGAAAAACGATCAACATGCTCTTCATCCCCATTTGTTCTCCCTGTATCCTTCTAACGACCCTGTTACAAAAAGTGGGAAGTACTCTTACGACCCTGAACGCATACGCGGTACCATTCTTCATGCTGCAATACATGCCGAGTTCTTTGGTGCTCAATACGAAGATGCTAAAGAGGAAGATGTTCATGAACAAAATTCCAGTGATGATAGTCATGTACAAAGTTCCAGTAGAGCCACTCTGTTTCTACGGCGAATCATGTCTTCAGAATGGCCAACGATGAAGAAGATTCATGACGAAAGGAAAAGGCATGAACTTGCTTTAGAACTAGGCAAGTTTTTAATTGCAGAAGACTTTTCATGGCACATCAAAGCGCCATCCCAGTCAGAGACTCCAGATATCCCATTGTTCATTGCAACAAGCAATGGAATATTAGAAATTGTGGAGGAGACACTTAGAGTCTACCCTTTGTCACTTGAGTATACAGACAAAGAGAAGCAAAACATACTGCACCTCGCTATATTGCACCGTCAGCCGGACATCTTTGATGTGACGAAGAGGTTTGATGTGACGAAGAGGTTAATGCCAAGGTTGGCTCGACAAACCGATAAGAATGGATTCACAATACTGCACCATGCTGGAAACATGAAATTTTATAAAGGAGGCACCCAGCCTGGTCCTGCACTTCAGTTGCAAGAAGAGTTAGAATGGTATGAGAAGGTGGAGAAGTTAGTCCCACGATATTATGCAAGGAATCCTGCTGTTGAACAAAAAGAGACTCTCGAAGAGTTCTGTAGACGAAAATATACGGAAACTGTAGAGGAGTTGTCTCAGAACGCGAATAAGATAATTCCACCCAAATCTGTAAATAAGCTTGGCTGGGACGAAAGCAAAGAGGAGACCCCCAGAGAGTACTTTGCTCGAACCCATGGGGAGCTCCTCGAGGAAGCACAAGAATGGCTAGAGCGGACCTCCAACTCGTGCTCCTTGGTGGCTGGACTAATTGCCTCCGTCGCCTTCGCGGCCGCTTTCACCATCCCGGGCGGCAACAACGCAAGAAACGGGCAGCCCATCCTTATCGACAGCCCTTTCTTCTTGGTCTTCATCATCACTAACGCTCTCTCCATCGCCAGCTCGCTGACGTCACTCGCCATGTTCCTCTCCATCCTATCGTCACCGTACGAGCTCGAGGACTTCCACCGCTCTCTCCCTCGGAAGCTCATCCTCGGCTTCACCTCCCTCTTCTTCTCGGTGGCCGTCACCATGCTCGCCTTTGCCTCCACAATGATGCTGACAATTCCGATGAAGAAGCGCCTGACTACAACTCTTATATACTGCGTTGCGGTTCTTCCGGTCACCATGTTTGCGCTGTTGCAGTACCCGTTGTGGGAGGCCTTAATAAGGACTGGAAAGTCCTCAGTCAAAGTCGTGAAAAGAATTCTTCCCTGGCCACTTATCGAAACTGCTTGCTCAAAGGCCACTAAGGCCCACACTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

586

Amino Acids

66.5

Weight (kDa)

6.23

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 406 - 518 1.1e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 918
AasI GACNNNNNNGTC 1 cut(s) 1672
AatII GACGTC 1 cut(s) 1406
AbsI CCTCGAGG 1 cut(s) 1202
Acc65I GGTACC 1 cut(s) 374
AccB1I GGYRCC 3 cut(s) 163, 374, 926
AccBSI CCGCTC 2 cut(s) 1228, 1464
AccI GTMKAC 3 cut(s) 723, 743, 1057
AccII CGCG 3 cut(s) 372, 1100, 1283
AciI CCGC 7 cut(s) 372, 1228, 1283, 1287, 1305, 1462, 1604
AcoI YGGCCR 5 cut(s) 229, 533, 1284, 1515, 1709
AcsI RAATTY 4 cut(s) 241, 457, 911, 1698
AcuI CTGAAG 2 cut(s) 510, 932
AcyI GRCGYC 1 cut(s) 1403
AfaI GTAC 7 cut(s) 135, 347, 376, 480, 1175, 1442, 1640
AfiI CCNNNNNNNGG 3 cut(s) 796, 1648, 1662
AflIII ACRYGT 1 cut(s) 136
AgsI TTSAA 1 cut(s) 1028
AjnI CCWGG 2 cut(s) 934, 1706
AluBI AGCT 7 cut(s) 70, 221, 1135, 1198, 1395, 1447, 1480
AluI AGCT 7 cut(s) 70, 221, 1135, 1198, 1395, 1447, 1480
Alw21I GWGCWC 4 cut(s) 418, 1200, 1247, 1449
Alw26I GTCTC 5 cut(s) 644, 704, 1031, 1095, 1154
Ama87I CYCGRG 3 cut(s) 1202, 1300, 1448
AoxI GGCC 8 cut(s) 229, 533, 1284, 1515, 1653, 1709, 1737, 1746
ApeKI GCWGC 5 cut(s) 116, 119, 218, 389, 1327
ApoI RAATTY 4 cut(s) 241, 457, 911, 1698
Asp700I GAANNNNTTC 2 cut(s) 444, 878
Asp718I GGTACC 1 cut(s) 374
AspLEI GCGC 3 cut(s) 637, 1575, 1630
AspS9I GGNCC 3 cut(s) 938, 1230, 1747
AsuC2I CCSGG 2 cut(s) 1301, 1302
AsuHPI GGTGA 5 cut(s) 1285, 1428, 1486, 1513, 1609
AvaI CYCGRG 3 cut(s) 1202, 1300, 1448
AvaII GGWCC 2 cut(s) 938, 1230
BalI TGGCCA 3 cut(s) 231, 535, 1711
BanI GGYRCC 3 cut(s) 163, 374, 926
BanII GRGCYC 2 cut(s) 1200, 1449
BarI GAAGNNNNNNTAC 2 cut(s) 335, 367
BauI CACGAG 1 cut(s) 1240
BbsI GAAGAC 3 cut(s) 516, 618, 1354
Bbv12I GWGCWC 4 cut(s) 418, 1200, 1247, 1449
BbvI GCAGC 5 cut(s) 103, 131, 230, 376, 1339
BccI CCATC 5 cut(s) 646, 1304, 1340, 1394, 1433
BceAI ACGGC 2 cut(s) 527, 1502
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 2 cut(s) 936, 1708
BciVI GTATCC 1 cut(s) 321
BcnI CCSGG 2 cut(s) 1301, 1302
BcoDI GTCTC 5 cut(s) 644, 704, 1031, 1095, 1154
BfaI CTAG 2 cut(s) 590, 1223
BfmI CTRYAG 3 cut(s) 117, 1054, 1077
BfoI RGCGCY 2 cut(s) 638, 1576
BfuI GTATCC 1 cut(s) 321
BglI GCCNNNNNGGC 2 cut(s) 1283, 1745
BisI GCNGC 8 cut(s) 117, 120, 219, 390, 1284, 1287, 1306, 1328
BlsI GCNGC 8 cut(s) 118, 121, 220, 391, 1285, 1288, 1307, 1329
BmcAI AGTACT 2 cut(s) 347, 1175
Bme1390I CCNGG 4 cut(s) 936, 1301, 1302, 1708
Bme18I GGWCC 2 cut(s) 938, 1230
BmeT110I CYCGRG 3 cut(s) 1202, 1300, 1448
BmgT120I GGNCC 3 cut(s) 938, 1230, 1747
BmiI GGNNCC 3 cut(s) 165, 376, 928
BmrFI CCNGG 4 cut(s) 936, 1301, 1302, 1708
BmrI ACTGGG 1 cut(s) 637
BmsI GCATC 3 cut(s) 36, 418, 1539
BmuI ACTGGG 1 cut(s) 637
BpiI GAAGAC 3 cut(s) 516, 618, 1354
BplI GAGNNNNNCTC 2 cut(s) 1217, 1249
BpmI CTGGAG 1 cut(s) 639
BpuEI CTTGAG 1 cut(s) 758
BpuMI CCSGG 2 cut(s) 1301, 1302
BsaAI YACGTR 1 cut(s) 137
BsaHI GRCGYC 1 cut(s) 1403
BsaI GGTCTC 1 cut(s) 1154
BsaJI CCNNGG 7 cut(s) 848, 1189, 1248, 1300, 1472, 1486, 1706
BsaWI WCCGGW 1 cut(s) 1612
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 1229, 1259, 1367, 1397
Bsc4I CCNNNNNNNGG 3 cut(s) 796, 1648, 1662
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 4 cut(s) 462, 489, 643, 1672
Bse3DI GCAATG 3 cut(s) 170, 672, 691
BseBI CCWGG 2 cut(s) 936, 1708
BseDI CCNNGG 7 cut(s) 848, 1189, 1248, 1300, 1472, 1486, 1706
BseGI GGATG 6 cut(s) 289, 638, 1296, 1332, 1425, 1482
BseLI CCNNNNNNNGG 3 cut(s) 796, 1648, 1662
BseMI GCAATG 3 cut(s) 170, 672, 691
BseMII CTCAG 2 cut(s) 1106, 1692
BseNI ACTGG 4 cut(s) 462, 489, 643, 1672
BseRI GAGGAG 4 cut(s) 722, 1097, 1172, 1190
BseX3I CGGCCG 1 cut(s) 1284
BseXI GCAGC 5 cut(s) 103, 131, 230, 376, 1339
BseYI CCCAGC 2 cut(s) 930, 1140
BsgI GTGCAG 3 cut(s) 755, 875, 927
Bsh1236I CGCG 3 cut(s) 372, 1100, 1283
Bsh1285I CGRYCG 1 cut(s) 1287
BshFI GGCC 8 cut(s) 231, 535, 1286, 1517, 1655, 1711, 1739, 1748
BshNI GGYRCC 3 cut(s) 163, 374, 926
BsiEI CGRYCG 1 cut(s) 1287
BsiHKAI GWGCWC 4 cut(s) 418, 1200, 1247, 1449
BsiHKCI CYCGRG 3 cut(s) 1202, 1300, 1448
BsiSI CCGG 4 cut(s) 167, 797, 1301, 1613
BsiWI CGTACG 1 cut(s) 1440
BslFI GGGAC 2 cut(s) 980, 1157
BslI CCNNNNNNNGG 3 cut(s) 796, 1648, 1662
BsmAI GTCTC 5 cut(s) 644, 704, 1031, 1095, 1154
BsmFI GGGAC 2 cut(s) 980, 1157
BsnI GGCC 8 cut(s) 231, 535, 1286, 1517, 1655, 1711, 1739, 1748
Bso31I GGTCTC 1 cut(s) 1154
BsoBI CYCGRG 3 cut(s) 1202, 1300, 1448
Bsp1286I GDGCHC 4 cut(s) 418, 1200, 1247, 1449
Bsp1407I TGTACA 1 cut(s) 478
Bsp143I GATC 1 cut(s) 274
Bsp19I CCATGG 1 cut(s) 1189
BspACI CCGC 7 cut(s) 372, 1228, 1283, 1287, 1305, 1462, 1604
BspANI GGCC 8 cut(s) 231, 535, 1286, 1517, 1655, 1711, 1739, 1748
BspCNI CTCAG 2 cut(s) 1105, 1691
BspFNI CGCG 3 cut(s) 372, 1100, 1283
BspHI TCATGA 4 cut(s) 109, 448, 553, 1757
BspLI GGNNCC 3 cut(s) 165, 376, 928
BspMAI CTGCAG 1 cut(s) 121
BspQI GCTCTTC 2 cut(s) 111, 291
BspT107I GGYRCC 3 cut(s) 163, 374, 926
BspTNI GGTCTC 1 cut(s) 1154
BsrBI CCGCTC 2 cut(s) 1228, 1464
BsrDI GCAATG 3 cut(s) 170, 672, 691
BsrFI RCCGGY 1 cut(s) 166
BsrGI TGTACA 1 cut(s) 478
BsrI ACTGG 4 cut(s) 462, 489, 643, 1672
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 7 cut(s) 848, 1189, 1248, 1300, 1472, 1486, 1706
BssMI GATC 1 cut(s) 274
BssNAI GTATAC 1 cut(s) 744
BssNI GRCGYC 1 cut(s) 1403
BssSI CACGAG 1 cut(s) 1240
BssT1I CCWWGG 3 cut(s) 848, 1189, 1248
Bst1107I GTATAC 1 cut(s) 744
Bst2BI CACGAG 1 cut(s) 1240
Bst2UI CCWGG 2 cut(s) 936, 1708
Bst4CI ACNGT 3 cut(s) 791, 1078, 1440
Bst6I CTCTTC 7 cut(s) 111, 291, 812, 830, 954, 1041, 1508
BstACI GRCGYC 1 cut(s) 1403
BstAPI GCANNNNNTGC 1 cut(s) 398
BstAUI TGTACA 1 cut(s) 478
BstBAI YACGTR 1 cut(s) 137
BstC8I GCNNGC 6 cut(s) 56, 255, 1393, 1397, 1530, 1729
BstDEI CTNAG 4 cut(s) 716, 1092, 1678, 1743
BstDSI CCRYGG 1 cut(s) 1189
BstEII GGTNACC 1 cut(s) 1615
BstENI CCTNNNNNAGG 1 cut(s) 1660
BstF5I GGATG 6 cut(s) 289, 638, 1296, 1332, 1425, 1482
BstFNI CGCG 3 cut(s) 372, 1100, 1283
BstH2I RGCGCY 2 cut(s) 638, 1576
BstHHI GCGC 3 cut(s) 637, 1575, 1630
BstKTI GATC 1 cut(s) 277
BstMAI GTCTC 5 cut(s) 644, 704, 1031, 1095, 1154
BstMBI GATC 1 cut(s) 274
BstMCI CGRYCG 1 cut(s) 1287
BstMWI GCNNNNNNNGC 5 cut(s) 398, 793, 1274, 1283, 1745
BstNI CCWGG 2 cut(s) 936, 1708
BstNSI RCATGY 2 cut(s) 284, 401
BstPI GGTNACC 1 cut(s) 1615
BstSCI CCNGG 4 cut(s) 934, 1299, 1300, 1706
BstSFI CTRYAG 3 cut(s) 117, 1054, 1077
BstUI CGCG 3 cut(s) 372, 1100, 1283
BstV1I GCAGC 5 cut(s) 103, 131, 230, 376, 1339
BstV2I GAAGAC 3 cut(s) 516, 618, 1354
BstZ17I GTATAC 1 cut(s) 744
BstZI CGGCCG 1 cut(s) 1284
BsuI GTATCC 1 cut(s) 321
BsuRI GGCC 8 cut(s) 231, 535, 1286, 1517, 1655, 1711, 1739, 1748
BtgI CCRYGG 1 cut(s) 1189
BtgZI GCGATG 2 cut(s) 13, 1372
BtsCI GGATG 6 cut(s) 289, 638, 1296, 1332, 1425, 1482
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 2 cut(s) 99, 469
Cac8I GCNNGC 6 cut(s) 56, 255, 1393, 1397, 1530, 1729
CciI TCATGA 4 cut(s) 109, 448, 553, 1757
CciNI GCGGCCGC 1 cut(s) 1284
CfoI GCGC 3 cut(s) 637, 1575, 1630
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 3 cut(s) 938, 1230, 1747
Cfr9I CCCGGG 1 cut(s) 1300
Csp6I GTAC 7 cut(s) 134, 346, 375, 479, 1174, 1441, 1639
CviQI GTAC 7 cut(s) 134, 346, 375, 479, 1174, 1441, 1639
DdeI CTNAG 4 cut(s) 716, 1092, 1678, 1743
DpnI GATC 1 cut(s) 276
DpnII GATC 1 cut(s) 274
DrdI GACNNNNNNGTC 1 cut(s) 1672
DseDI GACNNNNNNGTC 1 cut(s) 1672
EaeI YGGCCR 5 cut(s) 229, 533, 1284, 1515, 1709
EagI CGGCCG 1 cut(s) 1284
Eam1104I CTCTTC 7 cut(s) 111, 291, 812, 830, 954, 1041, 1508
EarI CTCTTC 7 cut(s) 111, 291, 812, 830, 954, 1041, 1508
Ecl136II GAGCTC 2 cut(s) 1198, 1447
EclXI CGGCCG 1 cut(s) 1284
Eco130I CCWWGG 3 cut(s) 848, 1189, 1248
Eco147I AGGCCT 1 cut(s) 1655
Eco24I GRGCYC 2 cut(s) 1200, 1449
Eco31I GGTCTC 1 cut(s) 1154
Eco32I GATATC 1 cut(s) 661
Eco47I GGWCC 2 cut(s) 938, 1230
Eco52I CGGCCG 1 cut(s) 1284
Eco53kI GAGCTC 2 cut(s) 1198, 1447
Eco57I CTGAAG 2 cut(s) 510, 932
Eco88I CYCGRG 3 cut(s) 1202, 1300, 1448
Eco91I GGTNACC 1 cut(s) 1615
EcoICRI GAGCTC 2 cut(s) 1198, 1447
EcoNI CCTNNNNNAGG 1 cut(s) 1660
EcoO65I GGTNACC 1 cut(s) 1615
EcoRI GAATTC 1 cut(s) 1698
EcoRII CCWGG 2 cut(s) 934, 1706
EcoRV GATATC 1 cut(s) 661
EcoT14I CCWWGG 3 cut(s) 848, 1189, 1248
EcoT38I GRGCYC 2 cut(s) 1200, 1449
ErhI CCWWGG 3 cut(s) 848, 1189, 1248
FaqI GGGAC 2 cut(s) 980, 1157
FblI GTMKAC 3 cut(s) 723, 743, 1057
Fnu4HI GCNGC 8 cut(s) 117, 120, 219, 390, 1284, 1287, 1306, 1328
FokI GGATG 6 cut(s) 276, 625, 1283, 1319, 1412, 1469
FriOI GRGCYC 2 cut(s) 1200, 1449
Fsp4HI GCNGC 8 cut(s) 117, 120, 219, 390, 1284, 1287, 1306, 1328
FspBI CTAG 2 cut(s) 590, 1223
GlaI GCGC 3 cut(s) 636, 1574, 1629
GluI GCNGC 8 cut(s) 117, 120, 219, 390, 1284, 1287, 1306, 1328
GsaI CCCAGC 2 cut(s) 934, 1144
GsuI CTGGAG 1 cut(s) 639
HaeII RGCGCY 2 cut(s) 638, 1576
HaeIII GGCC 8 cut(s) 231, 535, 1286, 1517, 1655, 1711, 1739, 1748
HapII CCGG 4 cut(s) 167, 797, 1301, 1613
HhaI GCGC 3 cut(s) 637, 1575, 1630
Hin1I GRCGYC 1 cut(s) 1403
Hin6I GCGC 3 cut(s) 635, 1573, 1628
HinP1I GCGC 3 cut(s) 635, 1573, 1628
HindIII AAGCTT 1 cut(s) 1133
HinfI GANTC 8 cut(s) 39, 516, 550, 652, 720, 879, 1015, 1039
HpaII CCGG 4 cut(s) 167, 797, 1301, 1613
HphI GGTGA 5 cut(s) 1285, 1428, 1486, 1513, 1609
Hpy166II GTNNAC 4 cut(s) 134, 724, 744, 1058
Hpy188I TCNGA 5 cut(s) 529, 649, 1095, 1476, 1563
Hpy188III TCNNGA 7 cut(s) 110, 449, 554, 656, 1043, 1690, 1758
Hpy8I GTNNAC 4 cut(s) 134, 724, 744, 1058
Hpy99I CGWCG 1 cut(s) 1277
HpyAV CCTTC 3 cut(s) 324, 973, 1288
HpyCH4III ACNGT 3 cut(s) 791, 1078, 1440
HpyCH4IV ACGT 2 cut(s) 136, 1403
HpyF10VI GCNNNNNNNGC 5 cut(s) 398, 793, 1274, 1283, 1745
HpyF3I CTNAG 4 cut(s) 716, 1092, 1678, 1743
HpySE526I ACGT 2 cut(s) 136, 1403
Hsp92I GRCGYC 1 cut(s) 1403
HspAI GCGC 3 cut(s) 635, 1573, 1628
KpnI GGTACC 1 cut(s) 378
Kzo9I GATC 1 cut(s) 274
LguI GCTCTTC 2 cut(s) 111, 291
LmnI GCTCC 4 cut(s) 16, 1195, 1203, 1250
Lsp1109I GCAGC 5 cut(s) 103, 131, 230, 376, 1339
LweI GCATC 3 cut(s) 36, 418, 1539
MaeI CTAG 2 cut(s) 590, 1223
MaeII ACGT 2 cut(s) 136, 1403
MaeIII GTNAC 8 cut(s) 328, 732, 811, 829, 1404, 1434, 1519, 1615
MalI GATC 1 cut(s) 276
MbiI CCGCTC 2 cut(s) 1228, 1464
MboI GATC 1 cut(s) 274
MfeI CAATTG 1 cut(s) 123
MhlI GDGCHC 4 cut(s) 418, 1200, 1247, 1449
MlsI TGGCCA 3 cut(s) 231, 535, 1711
MluNI TGGCCA 3 cut(s) 231, 535, 1711
MlyI GAGTC 3 cut(s) 646, 729, 1033
MmeI TCCRAC 2 cut(s) 135, 1260
Mox20I TGGCCA 3 cut(s) 231, 535, 1711
MroXI GAANNNNTTC 2 cut(s) 444, 878
MscI TGGCCA 3 cut(s) 231, 535, 1711
MseI TTAA 3 cut(s) 602, 842, 1658
MslI CAYNNNNRTG 2 cut(s) 1216, 1547
Msp20I TGGCCA 3 cut(s) 231, 535, 1711
MspI CCGG 4 cut(s) 167, 797, 1301, 1613
MspR9I CCNGG 4 cut(s) 936, 1301, 1302, 1708
MunI CAATTG 1 cut(s) 123
MvaI CCWGG 2 cut(s) 936, 1708
MvnI CGCG 3 cut(s) 372, 1100, 1283
MwoI GCNNNNNNNGC 5 cut(s) 398, 793, 1274, 1283, 1745
NciI CCSGG 2 cut(s) 1301, 1302
NcoI CCATGG 1 cut(s) 1189
NdeII GATC 1 cut(s) 274
NlaIV GGNNCC 3 cut(s) 165, 376, 928
NmeAIII GCCGAG 2 cut(s) 427, 1467
NmuCI GTSAC 7 cut(s) 732, 811, 829, 1404, 1434, 1519, 1615
NotI GCGGCCGC 1 cut(s) 1284
NspI RCATGY 2 cut(s) 284, 401
PaeR7I CTCGAG 2 cut(s) 1202, 1448
PagI TCATGA 4 cut(s) 109, 448, 553, 1757
PceI AGGCCT 1 cut(s) 1655
PciSI GCTCTTC 2 cut(s) 111, 291
PdmI GAANNNNTTC 2 cut(s) 444, 878
PfeI GAWTC 5 cut(s) 39, 516, 550, 879, 1015
Pfl23II CGTACG 1 cut(s) 1440
PkrI GCNGC 8 cut(s) 118, 121, 220, 391, 1285, 1288, 1307, 1329
PleI GAGTC 3 cut(s) 646, 728, 1033
PpsI GAGTC 3 cut(s) 646, 728, 1033
Ppu21I YACGTR 1 cut(s) 137
PsiI TTATAA 1 cut(s) 918
Psp124BI GAGCTC 2 cut(s) 1200, 1449
Psp6I CCWGG 2 cut(s) 934, 1706
PspEI GGTNACC 1 cut(s) 1615
PspFI CCCAGC 2 cut(s) 930, 1140
PspGI CCWGG 2 cut(s) 934, 1706
PspLI CGTACG 1 cut(s) 1440
PspN4I GGNNCC 3 cut(s) 165, 376, 928
PspPI GGNCC 3 cut(s) 938, 1230, 1747
PspXI VCTCGAGB 2 cut(s) 1202, 1448
PstI CTGCAG 1 cut(s) 121
RsaI GTAC 7 cut(s) 135, 347, 376, 480, 1175, 1442, 1640
RsaNI GTAC 7 cut(s) 134, 346, 375, 479, 1174, 1441, 1639
RseI CAYNNNNRTG 2 cut(s) 1216, 1547
SacI GAGCTC 2 cut(s) 1200, 1449
SapI GCTCTTC 2 cut(s) 111, 291
SaqAI TTAA 3 cut(s) 602, 842, 1658
SatI GCNGC 8 cut(s) 117, 120, 219, 390, 1284, 1287, 1306, 1328
Sau3AI GATC 1 cut(s) 274
Sau96I GGNCC 3 cut(s) 938, 1230, 1747
ScaI AGTACT 2 cut(s) 347, 1175
SchI GAGTC 3 cut(s) 646, 729, 1033
ScrFI CCNGG 4 cut(s) 936, 1301, 1302, 1708
SduI GDGCHC 4 cut(s) 418, 1200, 1247, 1449
SfaNI GCATC 3 cut(s) 36, 418, 1539
SfcI CTRYAG 3 cut(s) 117, 1054, 1077
SfiI GGCCNNNNNGGCC 1 cut(s) 1745
Sfr274I CTCGAG 2 cut(s) 1202, 1448
SinI GGWCC 2 cut(s) 938, 1230
SlaI CTCGAG 2 cut(s) 1202, 1448
SmaI CCCGGG 1 cut(s) 1302
SmiMI CAYNNNNRTG 2 cut(s) 1216, 1547
SmlI CTYRAG 3 cut(s) 737, 1202, 1448
SmoI CTYRAG 3 cut(s) 737, 1202, 1448
SseBI AGGCCT 1 cut(s) 1655
SsiI CCGC 7 cut(s) 372, 1228, 1283, 1287, 1305, 1462, 1604
SspI AATATT 1 cut(s) 693
SspMI CTAG 2 cut(s) 590, 1223
SstI GAGCTC 2 cut(s) 1200, 1449
StuI AGGCCT 1 cut(s) 1655
StyD4I CCNGG 4 cut(s) 934, 1299, 1300, 1706
StyI CCWWGG 3 cut(s) 848, 1189, 1248
TaaI ACNGT 3 cut(s) 791, 1078, 1440
TaiI ACGT 2 cut(s) 139, 1406
TaqI TCGA 8 cut(s) 45, 859, 1044, 1183, 1203, 1341, 1449, 1719
TatI WGTACW 3 cut(s) 345, 478, 1173
TauI GCSGC 3 cut(s) 1286, 1289, 1308
TfiI GAWTC 5 cut(s) 39, 516, 550, 879, 1015
Tru1I TTAA 3 cut(s) 602, 842, 1658
Tru9I TTAA 3 cut(s) 602, 842, 1658
TscAI CASTG 2 cut(s) 106, 469
TseFI GTSAC 7 cut(s) 732, 811, 829, 1404, 1434, 1519, 1615
TseI GCWGC 5 cut(s) 116, 119, 218, 389, 1327
Tsp45I GTSAC 7 cut(s) 732, 811, 829, 1404, 1434, 1519, 1615
TspGWI ACGGA 2 cut(s) 1085, 1261
TspMI CCCGGG 1 cut(s) 1300
TspRI CASTG 2 cut(s) 106, 469
VpaK11BI GGWCC 2 cut(s) 938, 1230
XagI CCTNNNNNAGG 1 cut(s) 1660
XapI RAATTY 4 cut(s) 241, 457, 911, 1698
XceI RCATGY 2 cut(s) 284, 401
XhoI CTCGAG 2 cut(s) 1202, 1448
XmaI CCCGGG 1 cut(s) 1300
XmiI GTMKAC 3 cut(s) 723, 743, 1057
XmnI GAANNNNTTC 2 cut(s) 444, 878
XspI CTAG 2 cut(s) 590, 1223
ZraI GACGTC 1 cut(s) 1404
ZrmI AGTACT 2 cut(s) 347, 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.