Rh5CG016100

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000724
Physical Location & Seq
Forward (+)
1061655 .. 1067522
5868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG016100.1

Sequence Viewer

Length: 2064 bp
ATGGCAGAAAATAACAGCATAAATCCCAAACACCTATATCAAAGCCTAAAGAATGGTGAGAAAGCCAAAGTGATGGAATATTATAGAACTATGTCTGATGATGAAAGGTTGAAAATCATTCCAACAGTGAACAAGGATACAATCCTGCATTTAGCAATTTACATGGGGCAGCAAGACATAGCAAAAGAAATCGTTGAAAAATGTTCCAGGGGTCCTGATGATATGCTACTTATGAAGAGCAATGCCCTCGGAAACACAGTTCTGCACGAGGCAGCAGCAACAAGCATGACAAGCCTCGTGATGGAGTTGCTACAAAAGGCACCAAAATTGTTGTCTAGTAGTAACAACAAAAATGAAATGCCTCTCTATACAGCAGCTTTCTATGGCCAGACCGAGATGTTCAAGTTGTTGGCGGAAAAAGTTGACACACACGAATCTAACAATCTTGATCTCCATTTGTGCCCCAATAAAGGTGGAACTACGGCCACTACCATTCTTCATGCTGCAATACATGGCGAGTTCTTTGATCTTGCACTTCTGATAGCGAAAAGGTATTCGCGGTTAGTCATGCAAAAGGACGAAAATCAGATGACAGGCCTTCAGCTGCTTTCGCGTAATCCTTACACCTTCAGGAGTGGAATCAAATATGGACCAATCGAGAGGATCATCTATTACTGTGCTCCATACGAGAATGTGGCGATGGATGAAGATGACAGCCACAAAGAAGGAGATGCTGATGAACAAAATTACAGCGACAGTGGTGATGAAACTGGAGCTTGCTTCACGCTGCAACCTCGGGGTCAAATATGTACACCACTTAATTTGAATAGCCACACCATTTCTTCTGCTTGGGGCACAATGAGGAGGATCTATGAGGACAAGACGAGGCATGAATCAGCTTTCAAACTAGCCAAGTTTCTAATTGAAGCAGACTATTCATGGGACAGCAAAGGAGAACAAGATAAAAACGCAATTGTCACTCCTACTCAGCCGCCTCTGGAATCCGGAGAAGCCCCTGTAGGTGGCAGCGATCACGTTTCTGATGGACAGCAAGAAAACGCTCTAGGCATTGGTGGCGGGCCTGGTGGCCCTCAATCACATCCAACCCCATTGCTCATTGCAACAAGACACGGAATACGAGAAATTGTGGATGAGATACTTAAACAATACCCTTTAGCAGTTGAGCATGTAAGTGAAATGGGGGAAAACATTCTGCATGTTGCCGTTATGCACCGCCAGTTGGCCGTCTTTCAACGAGTCATTAGGATGGAATCACCCAAGTCAAGGCTGGTTCGACGTATCGACAACAATGGATTTACAATCTTGCACCATGTTGGAAACATGGCCTTTTACAAAGGAGGCACAGAGCCTGGTCCTGCACTCCAGTTGCAAGAAGAGTTAGAATGGTTTGAGAATGTGAAGCGGGTAGTTCCACCCCATTATGCGATGCAACTTGCCTGGAACGAAAAGGAGACCCCCAAAGAGTACTTTTGTCATACACATGACGAGCTTCTCGCGAAGGCCCAAGAATGGCTGAAGCGGACCGCCGAGTCGTGCTCGACTGTGGCCGGACTAATGGCCACCGTCGCTTTCGCAGCTGCCTTCACCGTCCCCGGAGGCAACGACGAGAAAAGCGGCATTCCACGCCTTCTTCACAGCCCTTTCTTCTTAGTCTTCATCATCACCGACGCTCTCTCCCTAGCCAGCTCGCTGACGTCACTCGTCATGTTTCTCTCGATCCTGACGTCACCGTACGAGATCGACGACTTCCGCTACTCTCTCCCTCGGAAGCTTATCCTCGGCTTCACCTTCCTCTTCTTCTCGGTTGCGGTGACCATGCTGGCCTTTGCTTCCACACTGATGCTGACAGTTTCGACAAAGAAGAGCCTGACTACAACTTTTATATACTGCGTTGCGTTTCTTCCGGTCACTATGTTCGCGCTGTTGCAGTTCCCTTTGTACGTGGCCTTCAAAACGACTCTCCGGTACTCTGTACAGGCCATCCAAAGCGTTCTTCCGTGGCATCTTATCTCTGTTGGTTTTTCAAAACTCAAAAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

687

Amino Acids

76.84

Weight (kDa)

6.1

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 81 - 141 7.3e-06 Ankyrin repeats (3 copies)
PGG PF13962 510 - 622 3.7e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1549
AatII GACGTC 2 cut(s) 1718, 1748
AccB1I GGYRCC 1 cut(s) 319
AccII CGCG 4 cut(s) 559, 613, 1517, 1940
AccIII TCCGGA 1 cut(s) 1004
AclWI GGATC 3 cut(s) 671, 875, 1732
AcoI YGGCCR 5 cut(s) 385, 483, 1242, 1566, 1578
AcuI CTGAAG 3 cut(s) 584, 613, 1556
AcyI GRCGYC 2 cut(s) 1715, 1745
AfaI GTAC 6 cut(s) 811, 1487, 1754, 1961, 1988, 1995
AfiI CCNNNNNNNGG 6 cut(s) 301, 470, 1022, 1240, 1284, 1530
AgsI TTSAA 9 cut(s) 112, 197, 403, 826, 904, 926, 1253, 1972, 2046
AjnI CCWGG 4 cut(s) 206, 1081, 1369, 1457
AjuI GAANNNNNNNTTGG 2 cut(s) 1998, 2030
AloI GAACNNNNNNTCC 2 cut(s) 243, 275
AluBI AGCT 8 cut(s) 377, 604, 776, 899, 1510, 1598, 1707, 1792
AluI AGCT 8 cut(s) 377, 604, 776, 899, 1510, 1598, 1707, 1792
Alw21I GWGCWC 2 cut(s) 682, 1559
Alw26I GTCTC 1 cut(s) 1466
AlwI GGATC 3 cut(s) 671, 875, 1732
AlwNI CAGNNNCTG 1 cut(s) 1370
Ama87I CYCGRG 1 cut(s) 795
Aor13HI TCCGGA 1 cut(s) 1004
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
Asp700I GAANNNNTTC 1 cut(s) 1209
AspLEI GCGC 1 cut(s) 1942
AspS9I GGNCC 7 cut(s) 212, 650, 1079, 1088, 1373, 1522, 1542
AsuC2I CCSGG 1 cut(s) 1614
AsuHPI GGTGA 8 cut(s) 68, 773, 1266, 1597, 1675, 1740, 1798, 1843
AvaI CYCGRG 1 cut(s) 795
AvaII GGWCC 4 cut(s) 212, 650, 1373, 1542
BaeGI GKGCMC 2 cut(s) 464, 857
BalI TGGCCA 2 cut(s) 387, 1580
BanI GGYRCC 1 cut(s) 319
BarI GAAGNNNNNNTAC 2 cut(s) 1952, 1984
BauI CACGAG 2 cut(s) 266, 296
BbsI GAAGAC 1 cut(s) 1666
Bbv12I GWGCWC 2 cut(s) 682, 1559
BccI CCATC 6 cut(s) 67, 295, 694, 1037, 1261, 2009
BceAI ACGGC 3 cut(s) 498, 1208, 1229
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 4 cut(s) 208, 1083, 1371, 1459
BciVI GTATCC 1 cut(s) 130
BcnI CCSGG 1 cut(s) 1614
BcoDI GTCTC 1 cut(s) 1466
BfaI CTAG 4 cut(s) 336, 908, 1064, 1700
BfmI CTRYAG 1 cut(s) 1017
BfuI GTATCC 1 cut(s) 130
BmcAI AGTACT 1 cut(s) 1487
Bme1390I CCNGG 5 cut(s) 208, 1083, 1371, 1459, 1614
Bme18I GGWCC 4 cut(s) 212, 650, 1373, 1542
BmeT110I CYCGRG 1 cut(s) 795
BmgT120I GGNCC 7 cut(s) 212, 650, 1079, 1088, 1373, 1522, 1542
BmiI GGNNCC 2 cut(s) 213, 321
BmrFI CCNGG 5 cut(s) 208, 1083, 1371, 1459, 1614
BmsI GCATC 4 cut(s) 721, 1437, 1851, 2032
BpiI GAAGAC 1 cut(s) 1666
BplI GAGNNNNNCTC 2 cut(s) 1541, 1573
BpmI CTGGAG 2 cut(s) 792, 1367
BpuMI CCSGG 1 cut(s) 1614
BsaAI YACGTR 1 cut(s) 1963
BsaHI GRCGYC 2 cut(s) 1715, 1745
BsaI GGTCTC 1 cut(s) 1466
BsaJI CCNNGG 7 cut(s) 207, 247, 794, 1612, 1784, 1798, 2018
BsaWI WCCGGW 3 cut(s) 1004, 1924, 1983
BsaXI ACNNNNNCTCC 2 cut(s) 1679, 1709
Bsc4I CCNNNNNNNGG 6 cut(s) 301, 470, 1022, 1240, 1284, 1530
Bse1I ACTGG 3 cut(s) 775, 1237, 1384
Bse3DI GCAATG 3 cut(s) 247, 1109, 1116
BseAI TCCGGA 1 cut(s) 1004
BseBI CCWGG 4 cut(s) 208, 1083, 1371, 1459
BseDI CCNNGG 7 cut(s) 207, 247, 794, 1612, 1784, 1798, 2018
BseGI GGATG 5 cut(s) 709, 1099, 1156, 1272, 2001
BseLI CCNNNNNNNGG 6 cut(s) 301, 470, 1022, 1240, 1284, 1530
BseMI GCAATG 3 cut(s) 247, 1109, 1116
BseMII CTCAG 1 cut(s) 1001
BseNI ACTGG 3 cut(s) 775, 1237, 1384
BseRI GAGGAG 1 cut(s) 877
BseSI GKGCMC 2 cut(s) 464, 857
BsgI GTGCAG 2 cut(s) 248, 1362
Bsh1236I CGCG 4 cut(s) 559, 613, 1517, 1940
BshNI GGYRCC 1 cut(s) 319
BsiHKAI GWGCWC 2 cut(s) 682, 1559
BsiHKCI CYCGRG 1 cut(s) 795
BsiSI CCGG 5 cut(s) 1005, 1569, 1614, 1925, 1984
BsiWI CGTACG 1 cut(s) 1752
BslFI GGGAC 2 cut(s) 956, 1595
BslI CCNNNNNNNGG 6 cut(s) 301, 470, 1022, 1240, 1284, 1530
BsmAI GTCTC 1 cut(s) 1466
BsmFI GGGAC 2 cut(s) 956, 1595
BsmI GAATGC 1 cut(s) 1638
Bso31I GGTCTC 1 cut(s) 1466
BsoBI CYCGRG 1 cut(s) 795
Bsp1286I GDGCHC 4 cut(s) 464, 682, 857, 1559
Bsp13I TCCGGA 1 cut(s) 1004
Bsp1407I TGTACA 2 cut(s) 809, 1993
Bsp143I GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
Bsp68I TCGCGA 1 cut(s) 1517
BspCNI CTCAG 1 cut(s) 1000
BspEI TCCGGA 1 cut(s) 1004
BspFNI CGCG 4 cut(s) 559, 613, 1517, 1940
BspLI GGNNCC 2 cut(s) 213, 321
BspPI GGATC 3 cut(s) 671, 875, 1732
BspQI GCTCTTC 2 cut(s) 230, 1877
BspT107I GGYRCC 1 cut(s) 319
BspTNI GGTCTC 1 cut(s) 1466
BsrDI GCAATG 3 cut(s) 247, 1109, 1116
BsrGI TGTACA 2 cut(s) 809, 1993
BsrI ACTGG 3 cut(s) 775, 1237, 1384
BssECI CCNNGG 7 cut(s) 207, 247, 794, 1612, 1784, 1798, 2018
BssMI GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
BssNI GRCGYC 2 cut(s) 1715, 1745
BssSI CACGAG 2 cut(s) 266, 296
Bst2BI CACGAG 2 cut(s) 266, 296
Bst2UI CCWGG 4 cut(s) 208, 1083, 1371, 1459
Bst4CI ACNGT 9 cut(s) 127, 259, 677, 758, 1564, 1585, 1609, 1752, 1870
Bst6I CTCTTC 4 cut(s) 230, 1389, 1820, 1877
BstACI GRCGYC 2 cut(s) 1715, 1745
BstAUI TGTACA 2 cut(s) 809, 1993
BstBAI YACGTR 1 cut(s) 1963
BstC8I GCNNGC 5 cut(s) 778, 1079, 1705, 1709, 1842
BstDEI CTNAG 2 cut(s) 987, 1669
BstDSI CCRYGG 1 cut(s) 2018
BstEII GGTNACC 1 cut(s) 1831
BstF5I GGATG 5 cut(s) 709, 1099, 1156, 1272, 2001
BstFNI CGCG 4 cut(s) 559, 613, 1517, 1940
BstHHI GCGC 1 cut(s) 1942
BstKTI GATC 7 cut(s) 451, 529, 666, 870, 1033, 1740, 1761
BstMAI GTCTC 1 cut(s) 1466
BstMBI GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
BstMWI GCNNNNNNNGC 6 cut(s) 291, 610, 1074, 1586, 1595, 1644
BstNI CCWGG 4 cut(s) 208, 1083, 1371, 1459
BstNSI RCATGY 2 cut(s) 1190, 1220
BstPI GGTNACC 1 cut(s) 1831
BstSCI CCNGG 5 cut(s) 206, 1081, 1369, 1457, 1612
BstSFI CTRYAG 1 cut(s) 1017
BstSLI GKGCMC 2 cut(s) 464, 857
BstUI CGCG 4 cut(s) 559, 613, 1517, 1940
BstV2I GAAGAC 1 cut(s) 1666
BstX2I RGATCY 1 cut(s) 867
BstXI CCANNNNNNTGG 1 cut(s) 73
BstYI RGATCY 1 cut(s) 867
BsuI GTATCC 1 cut(s) 130
BtgI CCRYGG 1 cut(s) 2018
BtgZI GCGATG 2 cut(s) 713, 1460
BtsCI GGATG 5 cut(s) 709, 1099, 1156, 1272, 2001
BtsIMutI CAGTG 3 cut(s) 132, 763, 1856
BtuMI TCGCGA 1 cut(s) 1517
Cac8I GCNNGC 5 cut(s) 778, 1079, 1705, 1709, 1842
CaiI CAGNNNCTG 1 cut(s) 1370
CfoI GCGC 1 cut(s) 1942
Cfr13I GGNCC 7 cut(s) 212, 650, 1079, 1088, 1373, 1522, 1542
CpoI CGGWCCG 1 cut(s) 1542
CseI GACGC 1 cut(s) 1697
Csp6I GTAC 6 cut(s) 810, 1486, 1753, 1960, 1987, 1994
CspCI CAANNNNNGTGG 4 cut(s) 454, 489, 804, 839
CspI CGGWCCG 1 cut(s) 1542
CviQI GTAC 6 cut(s) 810, 1486, 1753, 1960, 1987, 1994
DdeI CTNAG 2 cut(s) 987, 1669
DpnI GATC 7 cut(s) 450, 528, 665, 869, 1032, 1739, 1760
DpnII GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
DrdI GACNNNNNNGTC 1 cut(s) 1549
DseDI GACNNNNNNGTC 1 cut(s) 1549
EaeI YGGCCR 5 cut(s) 385, 483, 1242, 1566, 1578
Eam1104I CTCTTC 4 cut(s) 230, 1389, 1820, 1877
EarI CTCTTC 4 cut(s) 230, 1389, 1820, 1877
EciI GGCGGA 1 cut(s) 428
Eco147I AGGCCT 1 cut(s) 597
Eco31I GGTCTC 1 cut(s) 1466
Eco47I GGWCC 4 cut(s) 212, 650, 1373, 1542
Eco57I CTGAAG 3 cut(s) 584, 613, 1556
Eco88I CYCGRG 1 cut(s) 795
Eco91I GGTNACC 1 cut(s) 1831
EcoO109I RGGNCCY 1 cut(s) 212
EcoO65I GGTNACC 1 cut(s) 1831
EcoRII CCWGG 4 cut(s) 206, 1081, 1369, 1457
FaqI GGGAC 2 cut(s) 956, 1595
FauI CCCGC 2 cut(s) 1070, 1416
FokI GGATG 5 cut(s) 716, 1086, 1163, 1279, 1988
FspBI CTAG 4 cut(s) 336, 908, 1064, 1700
GlaI GCGC 1 cut(s) 1941
GsuI CTGGAG 2 cut(s) 792, 1367
HapII CCGG 5 cut(s) 1005, 1569, 1614, 1925, 1984
HgaI GACGC 1 cut(s) 1697
HhaI GCGC 1 cut(s) 1942
Hin1I GRCGYC 2 cut(s) 1715, 1745
Hin6I GCGC 1 cut(s) 1940
HinP1I GCGC 1 cut(s) 1940
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HindIII AAGCTT 1 cut(s) 1790
HinfI GANTC 8 cut(s) 434, 639, 893, 1001, 1257, 1271, 1550, 1978
HpaII CCGG 5 cut(s) 1005, 1569, 1614, 1925, 1984
HphI GGTGA 8 cut(s) 68, 773, 1266, 1597, 1675, 1740, 1798, 1843
Hpy166II GTNNAC 3 cut(s) 130, 424, 812
Hpy188I TCNGA 6 cut(s) 97, 251, 540, 588, 1042, 1788
Hpy8I GTNNAC 3 cut(s) 130, 424, 812
Hpy99I CGWCG 5 cut(s) 1299, 1589, 1628, 1691, 1766
HpyAV CCTTC 8 cut(s) 608, 637, 719, 1513, 1612, 1658, 1819, 1978
HpyCH4III ACNGT 9 cut(s) 127, 259, 677, 758, 1564, 1585, 1609, 1752, 1870
HpyCH4IV ACGT 5 cut(s) 1035, 1297, 1715, 1745, 1962
HpyF10VI GCNNNNNNNGC 6 cut(s) 291, 610, 1074, 1586, 1595, 1644
HpyF3I CTNAG 2 cut(s) 987, 1669
HpySE526I ACGT 5 cut(s) 1035, 1297, 1715, 1745, 1962
Hsp92I GRCGYC 2 cut(s) 1715, 1745
HspAI GCGC 1 cut(s) 1940
Kpn2I TCCGGA 1 cut(s) 1004
Kzo9I GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
LguI GCTCTTC 2 cut(s) 230, 1877
LmnI GCTCC 2 cut(s) 685, 773
LweI GCATC 4 cut(s) 721, 1437, 1851, 2032
MaeI CTAG 4 cut(s) 336, 908, 1064, 1700
MaeII ACGT 5 cut(s) 1035, 1297, 1715, 1745, 1962
MaeIII GTNAC 6 cut(s) 341, 976, 1716, 1746, 1831, 1927
MalI GATC 7 cut(s) 450, 528, 665, 869, 1032, 1739, 1760
MboI GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
MfeI CAATTG 1 cut(s) 972
MflI RGATCY 1 cut(s) 867
MhlI GDGCHC 4 cut(s) 464, 682, 857, 1559
MlsI TGGCCA 2 cut(s) 387, 1580
MluCI AATT 8 cut(s) 156, 326, 745, 820, 921, 972, 1143, 2059
MluNI TGGCCA 2 cut(s) 387, 1580
MlyI GAGTC 3 cut(s) 1266, 1559, 1972
MmeI TCCRAC 3 cut(s) 146, 1127, 1315
Mox20I TGGCCA 2 cut(s) 387, 1580
MroI TCCGGA 1 cut(s) 1004
MroXI GAANNNNTTC 1 cut(s) 1209
MscI TGGCCA 2 cut(s) 387, 1580
MseI TTAA 3 cut(s) 819, 1161, 2062
MslI CAYNNNNRTG 4 cut(s) 1191, 1265, 1500, 1859
Msp20I TGGCCA 2 cut(s) 387, 1580
MspA1I CMGCKG 2 cut(s) 604, 1598
MspI CCGG 5 cut(s) 1005, 1569, 1614, 1925, 1984
MspR9I CCNGG 5 cut(s) 208, 1083, 1371, 1459, 1614
MunI CAATTG 1 cut(s) 972
Mva1269I GAATGC 1 cut(s) 1638
MvaI CCWGG 4 cut(s) 208, 1083, 1371, 1459
MvnI CGCG 4 cut(s) 559, 613, 1517, 1940
MwoI GCNNNNNNNGC 6 cut(s) 291, 610, 1074, 1586, 1595, 1644
NciI CCSGG 1 cut(s) 1614
NdeII GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
NlaIV GGNNCC 2 cut(s) 213, 321
NmeAIII GCCGAG 2 cut(s) 1573, 1779
NmuCI GTSAC 5 cut(s) 976, 1716, 1746, 1831, 1927
NruI TCGCGA 1 cut(s) 1517
NspI RCATGY 2 cut(s) 1190, 1220
PceI AGGCCT 1 cut(s) 597
PciSI GCTCTTC 2 cut(s) 230, 1877
PcsI WCGNNNNNNNCGW 2 cut(s) 1742, 1761
PctI GAATGC 1 cut(s) 1638
PdmI GAANNNNTTC 1 cut(s) 1209
PfeI GAWTC 5 cut(s) 434, 639, 893, 1001, 1271
Pfl23II CGTACG 1 cut(s) 1752
PleI GAGTC 3 cut(s) 1265, 1558, 1972
PpsI GAGTC 3 cut(s) 1265, 1558, 1972
Ppu21I YACGTR 1 cut(s) 1963
PpuMI RGGWCCY 1 cut(s) 212
Psp5II RGGWCCY 1 cut(s) 212
Psp6I CCWGG 4 cut(s) 206, 1081, 1369, 1457
PspEI GGTNACC 1 cut(s) 1831
PspGI CCWGG 4 cut(s) 206, 1081, 1369, 1457
PspLI CGTACG 1 cut(s) 1752
PspN4I GGNNCC 2 cut(s) 213, 321
PspPI GGNCC 7 cut(s) 212, 650, 1079, 1088, 1373, 1522, 1542
PspPPI RGGWCCY 1 cut(s) 212
PstNI CAGNNNCTG 1 cut(s) 1370
PsuI RGATCY 1 cut(s) 867
PvuII CAGCTG 2 cut(s) 604, 1598
RruI TCGCGA 1 cut(s) 1517
RsaI GTAC 6 cut(s) 811, 1487, 1754, 1961, 1988, 1995
RsaNI GTAC 6 cut(s) 810, 1486, 1753, 1960, 1987, 1994
RseI CAYNNNNRTG 4 cut(s) 1191, 1265, 1500, 1859
Rsr2I CGGWCCG 1 cut(s) 1542
RsrII CGGWCCG 1 cut(s) 1542
SapI GCTCTTC 2 cut(s) 230, 1877
SaqAI TTAA 3 cut(s) 819, 1161, 2062
Sau3AI GATC 7 cut(s) 448, 526, 663, 867, 1030, 1737, 1758
Sau96I GGNCC 7 cut(s) 212, 650, 1079, 1088, 1373, 1522, 1542
ScaI AGTACT 1 cut(s) 1487
SchI GAGTC 3 cut(s) 1266, 1559, 1972
ScrFI CCNGG 5 cut(s) 208, 1083, 1371, 1459, 1614
SduI GDGCHC 4 cut(s) 464, 682, 857, 1559
SfaNI GCATC 4 cut(s) 721, 1437, 1851, 2032
SfcI CTRYAG 1 cut(s) 1017
SinI GGWCC 4 cut(s) 212, 650, 1373, 1542
SmiMI CAYNNNNRTG 4 cut(s) 1191, 1265, 1500, 1859
Sse9I AATT 8 cut(s) 156, 326, 745, 820, 921, 972, 1143, 2059
SseBI AGGCCT 1 cut(s) 597
SspI AATATT 1 cut(s) 80
SspMI CTAG 4 cut(s) 336, 908, 1064, 1700
StuI AGGCCT 1 cut(s) 597
StyD4I CCNGG 5 cut(s) 206, 1081, 1369, 1457, 1612
TaaI ACNGT 9 cut(s) 127, 259, 677, 758, 1564, 1585, 1609, 1752, 1870
TaiI ACGT 5 cut(s) 1038, 1300, 1718, 1748, 1965
TaqI TCGA 7 cut(s) 657, 1294, 1302, 1559, 1736, 1761, 1874
TaqII GACCGA 1 cut(s) 407
TasI AATT 8 cut(s) 156, 326, 745, 820, 921, 972, 1143, 2059
TatI WGTACW 3 cut(s) 809, 1485, 1993
TauI GCSGC 2 cut(s) 994, 1638
TfiI GAWTC 5 cut(s) 434, 639, 893, 1001, 1271
Tru1I TTAA 3 cut(s) 819, 1161, 2062
Tru9I TTAA 3 cut(s) 819, 1161, 2062
TscAI CASTG 3 cut(s) 132, 763, 1863
TseFI GTSAC 5 cut(s) 976, 1716, 1746, 1831, 1927
Tsp45I GTSAC 5 cut(s) 976, 1716, 1746, 1831, 1927
TspGWI ACGGA 2 cut(s) 1146, 2007
TspRI CASTG 3 cut(s) 132, 763, 1863
VpaK11BI GGWCC 4 cut(s) 212, 650, 1373, 1542
XceI RCATGY 2 cut(s) 1190, 1220
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmnI GAANNNNTTC 1 cut(s) 1209
XspI CTAG 4 cut(s) 336, 908, 1064, 1700
ZraI GACGTC 2 cut(s) 1716, 1746
ZrmI AGTACT 1 cut(s) 1487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.