FvH4_4g07910
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
7474229 .. 7476281
2053 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g07910.t1

Sequence Viewer

Length: 888 bp
ATGTCGAGTTACTCGGATACACAGACAAGTAGTGGATCAGATGCAGGACTTTACATTGGTGTAGGGTTAGTAGTTGTCTTTGTGAAGATCACTATCTTGGTTGTAGTATGCAAGAAATGTAGTCAGAAAGGTAGCAGCTCTGATGATCCAAGCTTTCATGATCCAAGCTTCCCAACACTCACAATGGATAATTTTCTAAATGATATGGAAAGAGAGAAGCCCATCAGGTTTACTTCTCAACAACTTCGGATTGCAACTGATAACTTTACCAACTTGTTGGGTTCAGGAGGGTTTGGTTCAGTTTATAAAGGTCTATTTAGTAATGGAACGCTTGTGGCAGTGAAGGTTCTGAGGGGTACCTTGGACAAGAGAATTGATGAGCAATTCATGGCGGAAGTTAGTACACTTGGCAGGATTCATCATTTCAACTTGGTTCGTCTTCATGGTTTCTGCTTTGAGAGACAGTTTAGAGCACTTGTTTATGAGTACATGTCTAATGGTTCGCTTGATAAAATTCTATTTCTTGGAAACAAGATTATAGGATTTGAAAAGCTTCATGACATTGCGGTTGGGACGGCTAGAGGGATTGCTTACTTGCACGAAGAATGCCAGCAACGAATAGTCCATTATGATATAAAACCTGAAAATATTCTTTTGGATGTGAATTTCTTCCCTAAAGTTGCTGATTTCGGTTTGGCCAAGCTGTGCAACCGAGACAATACTCATATTTCAATGACAGGTGGGAGGGGAACTCCTGGTTATGCTGCACCAGAACTTTGGCTGGGGTTTCTTATAACCCACAAATGTGATGTGTACAGCTTTGGAATGCTGCTATTCGAGATTATAGGTAGAAGAAGGAATCATGACCTTAATCTTCCAGAGAGCTAA

Protein Analysis

296

Amino Acids

33.02

Weight (kDa)

7.14

Isoelectric Point (pI)

35.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 89 - 282 7.3e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 91 - 283 6e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 306, 794
Acc65I GGTACC 1 cut(s) 356
AccB1I GGYRCC 1 cut(s) 356
AciI CCGC 2 cut(s) 392, 566
AclWI GGATC 3 cut(s) 43, 140, 155
AcoI YGGCCR 1 cut(s) 696
AcsI RAATTY 2 cut(s) 513, 664
AfaI GTAC 4 cut(s) 358, 403, 488, 815
AflIII ACRYGT 1 cut(s) 489
AgsI TTSAA 3 cut(s) 427, 548, 732
AjnI CCWGG 1 cut(s) 754
AleI CACNNNNGTG 1 cut(s) 804
AluBI AGCT 7 cut(s) 138, 153, 168, 553, 703, 819, 885
AluI AGCT 7 cut(s) 138, 153, 168, 553, 703, 819, 885
Alw21I GWGCWC 1 cut(s) 475
Alw26I GTCTC 2 cut(s) 454, 708
AlwI GGATC 3 cut(s) 43, 140, 155
AoxI GGCC 1 cut(s) 696
ApeKI GCWGC 3 cut(s) 135, 764, 829
ApoI RAATTY 2 cut(s) 513, 664
Asp700I GAANNNNTTC 3 cut(s) 552, 648, 668
Asp718I GGTACC 1 cut(s) 356
BalI TGGCCA 1 cut(s) 698
BanI GGYRCC 1 cut(s) 356
BbsI GAAGAC 1 cut(s) 431
Bbv12I GWGCWC 1 cut(s) 475
BbvI GCAGC 3 cut(s) 147, 751, 816
BccI CCATC 1 cut(s) 230
BceAI ACGGC 1 cut(s) 591
BciT130I CCWGG 1 cut(s) 756
BciVI GTATCC 1 cut(s) 10
BcoDI GTCTC 2 cut(s) 454, 708
BfaI CTAG 1 cut(s) 579
BfuI GTATCC 1 cut(s) 10
BisI GCNGC 3 cut(s) 136, 765, 830
BlsI GCNGC 3 cut(s) 137, 766, 831
Bme1390I CCNGG 1 cut(s) 756
BmiI GGNNCC 1 cut(s) 358
BmrFI CCNGG 1 cut(s) 756
BmsI GCATC 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 431
BplI GAGNNNNNCTC 2 cut(s) 736, 768
BsaBI GATNNNNATC 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 360
Bse3DI GCAATG 1 cut(s) 561
Bse8I GATNNNNATC 1 cut(s) 92
BseBI CCWGG 1 cut(s) 756
BseDI CCNNGG 1 cut(s) 360
BseGI GGATG 1 cut(s) 664
BseJI GATNNNNATC 1 cut(s) 92
BseMI GCAATG 1 cut(s) 561
BseMII CTCAG 1 cut(s) 341
BseXI GCAGC 3 cut(s) 147, 751, 816
BseYI CCCAGC 1 cut(s) 781
BsgI GTGCAG 1 cut(s) 750
BshFI GGCC 1 cut(s) 698
BshNI GGYRCC 1 cut(s) 356
BsiHKAI GWGCWC 1 cut(s) 475
BslFI GGGAC 1 cut(s) 586
BsmAI GTCTC 2 cut(s) 454, 708
BsmFI GGGAC 1 cut(s) 586
BsmI GAATGC 2 cut(s) 611, 831
BsnI GGCC 1 cut(s) 698
Bsp1286I GDGCHC 1 cut(s) 475
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 4 cut(s) 35, 87, 145, 160
BspACI CCGC 2 cut(s) 392, 566
BspANI GGCC 1 cut(s) 698
BspCNI CTCAG 1 cut(s) 342
BspHI TCATGA 3 cut(s) 157, 556, 862
BspLI GGNNCC 1 cut(s) 358
BspPI GGATC 3 cut(s) 43, 140, 155
BspT107I GGYRCC 1 cut(s) 356
BsrDI GCAATG 1 cut(s) 561
BsrGI TGTACA 1 cut(s) 813
BssECI CCNNGG 1 cut(s) 360
BssMI GATC 4 cut(s) 35, 87, 145, 160
BssT1I CCWWGG 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 756
Bst4CI ACNGT 1 cut(s) 465
BstAUI TGTACA 1 cut(s) 813
BstC8I GCNNGC 1 cut(s) 611
BstDEI CTNAG 1 cut(s) 350
BstF5I GGATG 1 cut(s) 664
BstKTI GATC 4 cut(s) 38, 90, 148, 163
BstMAI GTCTC 2 cut(s) 454, 708
BstMBI GATC 4 cut(s) 35, 87, 145, 160
BstNI CCWGG 1 cut(s) 756
BstNSI RCATGY 1 cut(s) 493
BstSCI CCNGG 1 cut(s) 754
BstV1I GCAGC 3 cut(s) 147, 751, 816
BstV2I GAAGAC 1 cut(s) 431
BstXI CCANNNNNNTGG 2 cut(s) 277, 777
BsuI GTATCC 1 cut(s) 10
BsuRI GGCC 1 cut(s) 698
BtsCI GGATG 1 cut(s) 664
BtsI GCAGTG 1 cut(s) 345
BtsIMutI CAGTG 1 cut(s) 345
Cac8I GCNNGC 1 cut(s) 611
CciI TCATGA 3 cut(s) 157, 556, 862
Csp6I GTAC 4 cut(s) 357, 402, 487, 814
CviAII CATG 6 cut(s) 158, 388, 443, 490, 557, 863
CviQI GTAC 4 cut(s) 357, 402, 487, 814
DdeI CTNAG 1 cut(s) 350
DpnI GATC 4 cut(s) 37, 89, 147, 162
DpnII GATC 4 cut(s) 35, 87, 145, 160
EaeI YGGCCR 1 cut(s) 696
EciI GGCGGA 1 cut(s) 407
Eco130I CCWWGG 1 cut(s) 360
EcoRII CCWGG 1 cut(s) 754
EcoT14I CCWWGG 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 360
FaeI CATG 6 cut(s) 161, 391, 446, 493, 560, 866
FaqI GGGAC 1 cut(s) 586
FatI CATG 6 cut(s) 157, 387, 442, 489, 556, 862
Fnu4HI GCNGC 3 cut(s) 136, 765, 830
FokI GGATG 1 cut(s) 671
Fsp4HI GCNGC 3 cut(s) 136, 765, 830
FspBI CTAG 1 cut(s) 579
GluI GCNGC 3 cut(s) 136, 765, 830
GsaI CCCAGC 1 cut(s) 785
HaeIII GGCC 1 cut(s) 698
Hin1II CATG 6 cut(s) 161, 391, 446, 493, 560, 866
HindIII AAGCTT 3 cut(s) 151, 166, 551
HinfI GANTC 2 cut(s) 415, 859
Hpy166II GTNNAC 3 cut(s) 231, 404, 814
Hpy188I TCNGA 6 cut(s) 16, 40, 126, 142, 249, 351
Hpy188III TCNNGA 6 cut(s) 158, 285, 557, 838, 863, 878
Hpy8I GTNNAC 3 cut(s) 231, 404, 814
HpyAV CCTTC 2 cut(s) 337, 849
HpyCH4III ACNGT 1 cut(s) 465
HpyCH4V TGCA 6 cut(s) 44, 111, 254, 598, 708, 767
HpyF3I CTNAG 1 cut(s) 350
Hsp92II CATG 6 cut(s) 161, 391, 446, 493, 560, 866
KpnI GGTACC 1 cut(s) 360
Kzo9I GATC 4 cut(s) 35, 87, 145, 160
Lsp1109I GCAGC 3 cut(s) 147, 751, 816
LweI GCATC 1 cut(s) 31
MaeI CTAG 1 cut(s) 579
MaeIII GTNAC 1 cut(s) 8
MalI GATC 4 cut(s) 37, 89, 147, 162
MboI GATC 4 cut(s) 35, 87, 145, 160
MboII GAAGA 6 cut(s) 97, 431, 614, 661, 864, 866
MhlI GDGCHC 1 cut(s) 475
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 5 cut(s) 190, 372, 383, 513, 664
MluNI TGGCCA 1 cut(s) 698
MnlI CCTC 4 cut(s) 281, 345, 575, 738
Mox20I TGGCCA 1 cut(s) 698
MroXI GAANNNNTTC 3 cut(s) 552, 648, 668
MscI TGGCCA 1 cut(s) 698
MseI TTAA 1 cut(s) 870
MslI CAYNNNNRTG 1 cut(s) 804
Msp20I TGGCCA 1 cut(s) 698
MspR9I CCNGG 1 cut(s) 756
Mva1269I GAATGC 2 cut(s) 611, 831
MvaI CCWGG 1 cut(s) 756
NdeII GATC 4 cut(s) 35, 87, 145, 160
NlaIII CATG 6 cut(s) 161, 391, 446, 493, 560, 866
NlaIV GGNNCC 1 cut(s) 358
NspI RCATGY 1 cut(s) 493
OliI CACNNNNGTG 1 cut(s) 804
PagI TCATGA 3 cut(s) 157, 556, 862
PciI ACATGT 1 cut(s) 489
PctI GAATGC 2 cut(s) 611, 831
PdmI GAANNNNTTC 3 cut(s) 552, 648, 668
PfeI GAWTC 2 cut(s) 415, 859
PkrI GCNGC 3 cut(s) 137, 766, 831
PscI ACATGT 1 cut(s) 489
PsiI TTATAA 2 cut(s) 306, 794
Psp6I CCWGG 1 cut(s) 754
PspFI CCCAGC 1 cut(s) 781
PspGI CCWGG 1 cut(s) 754
PspN4I GGNNCC 1 cut(s) 358
RsaI GTAC 4 cut(s) 358, 403, 488, 815
RsaNI GTAC 4 cut(s) 357, 402, 487, 814
RseI CAYNNNNRTG 1 cut(s) 804
SaqAI TTAA 1 cut(s) 870
SatI GCNGC 3 cut(s) 136, 765, 830
Sau3AI GATC 4 cut(s) 35, 87, 145, 160
ScrFI CCNGG 1 cut(s) 756
SduI GDGCHC 1 cut(s) 475
SfaNI GCATC 1 cut(s) 31
SmiMI CAYNNNNRTG 1 cut(s) 804
Sse9I AATT 5 cut(s) 190, 372, 383, 513, 664
SsiI CCGC 2 cut(s) 392, 566
SspI AATATT 1 cut(s) 649
SspMI CTAG 1 cut(s) 579
StyD4I CCNGG 1 cut(s) 754
StyI CCWWGG 1 cut(s) 360
TaaI ACNGT 1 cut(s) 465
TaqI TCGA 2 cut(s) 5, 837
TasI AATT 5 cut(s) 190, 372, 383, 513, 664
TatI WGTACW 3 cut(s) 401, 486, 813
TfiI GAWTC 2 cut(s) 415, 859
Tru1I TTAA 1 cut(s) 870
Tru9I TTAA 1 cut(s) 870
TscAI CASTG 1 cut(s) 345
TseI GCWGC 3 cut(s) 135, 764, 829
TspDTI ATGAA 5 cut(s) 146, 376, 407, 431, 545
TspRI CASTG 1 cut(s) 345
XapI RAATTY 2 cut(s) 513, 664
XceI RCATGY 1 cut(s) 493
XmnI GAANNNNTTC 3 cut(s) 552, 648, 668
XspI CTAG 1 cut(s) 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.