RLG00000009155
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
47656490 .. 47657584
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009155

Sequence Viewer

Length: 1095 bp
ATGAACAAATTTCTGAATGATATGGAAACAGAGAAGACCATCAGATTTACTTCTCAACAACTTCAGATTGCAACTGATAACTTCACCAACTTGCTGGGTTCAGGAGGGTTTGGTGCAGTTTATAAAGGAATATTTAGTAATGGAACCTTTGTTGCAGTGAAGGTTCTAAATGGTACCTCGGACAAGGGAATTGAAGAACAATTCATGGCGGAAGTTAGTACCCTTGGCAGGATTCATCATATCAACTTGGTTCGTCTTCATGGTTTCTGCTTTGAGAGACACCTCAGAGCACTTGTTTATGAGTATATGCCAAATGGTTCGCTTGACAAGTTTCTATTCCATGGAAACCAGATTTTAGGATTCGAAAAGCTTCATGAAATTGCAGTTGGGACAGCTAGAGGGATTGCTTACCTGTACGAAGAATGCCAGCAGCGGATAGTCCACTATGATATAAAACCTGAAAATATTCTTTTAGATGTGAACTTCTTTCCTAAAGTAGCTGATTTTGGTTTGGCCAAGCTGTCCAACAGAGACAAGACTCATATAACAATGACAGGGTGGAGGGGAACCCGTGGTAATGCTGCACCAGAAGTTTGCCTGCGGTGTCCTATAACCCACAAGTGTGATGTGTACAGCTTTGGAATGCTATTATATGAGATCATAGGTAGAAGAAGGAACCTAGACCTGAATCTGCCGGAGAGTCAAGACTGGTTTCCAATGTGGGGATGGAAGAAGTTTGAAGTTGGTGAACTAGAAGAACTAATGGTAGTATGTGGTATAGATGAAAAAGATAAAGAGGCAGCAGAGAGAATGGTAAAAGTAGCTATATGGTGTGTTCAGTATAGCTCTGAGTTGAGGCCTTTGATGAGTGTAGTGGTGAAAATGCTGGAAGGAGCATTTGAAATTCCTAAACCTTCAATTAACCCATTTCAGTACTTGATGCCAGGTACTCCAATCGTGGCTGCATTACCTGCATATAGCACTAGTGCATTCGACATTGATTCCTCTAAAAAGATAACCGGACATAGATTCTTTTGTGGTACTCCTATCATGAGGAGATACGAAATTGAAATAGCATCTAGTATGCTGAAGTAA

Protein Analysis

365

Amino Acids

41.41

Weight (kDa)

6.8

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 28 - 295 1.9e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 30 - 225 5.4e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 123
Acc36I ACCTGC 1 cut(s) 979
Acc65I GGTACC 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 173
AciI CCGC 3 cut(s) 209, 433, 601
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 2 cut(s) 8, 903
AcuI CTGAAG 1 cut(s) 47
AfaI GTAC 7 cut(s) 175, 220, 416, 632, 935, 949, 1042
AfiI CCNNNNNNNGG 2 cut(s) 228, 722
AgsI TTSAA 5 cut(s) 194, 740, 902, 918, 1070
AhlI ACTAGT 1 cut(s) 983
AjnI CCWGG 1 cut(s) 943
AjuI GAANNNNNNNTTGG 2 cut(s) 369, 401
AleI CACNNNNGTG 1 cut(s) 621
AluBI AGCT 7 cut(s) 370, 395, 500, 520, 636, 824, 846
AluI AGCT 7 cut(s) 370, 395, 500, 520, 636, 824, 846
Alw21I GWGCWC 1 cut(s) 292
Alw26I GTCTC 2 cut(s) 271, 525
AoxI GGCC 2 cut(s) 513, 857
ApeKI GCWGC 4 cut(s) 430, 581, 800, 962
ApoI RAATTY 2 cut(s) 8, 903
Asp700I GAANNNNTTC 2 cut(s) 369, 465
Asp718I GGTACC 1 cut(s) 173
AsuHPI GGTGA 3 cut(s) 76, 758, 889
AsuII TTCGAA 1 cut(s) 363
BalI TGGCCA 1 cut(s) 515
BanI GGYRCC 1 cut(s) 173
BbsI GAAGAC 2 cut(s) 41, 248
Bbv12I GWGCWC 1 cut(s) 292
BbvI GCAGC 4 cut(s) 442, 568, 812, 949
BccI CCATC 2 cut(s) 47, 720
BciT130I CCWGG 1 cut(s) 945
BcoDI GTCTC 2 cut(s) 271, 525
BcuI ACTAGT 1 cut(s) 983
BfaI CTAG 5 cut(s) 396, 680, 752, 984, 1080
BfuAI ACCTGC 1 cut(s) 979
BisI GCNGC 4 cut(s) 431, 582, 801, 963
BlsI GCNGC 4 cut(s) 432, 583, 802, 964
BmcAI AGTACT 1 cut(s) 935
Bme1390I CCNGG 1 cut(s) 945
BmiI GGNNCC 4 cut(s) 145, 175, 568, 677
BmrFI CCNGG 1 cut(s) 945
BmsI GCATC 2 cut(s) 930, 1085
BpiI GAAGAC 2 cut(s) 41, 248
Bpu14I TTCGAA 1 cut(s) 363
BsaJI CCNNGG 4 cut(s) 177, 223, 340, 571
BsaWI WCCGGW 1 cut(s) 1019
Bsc4I CCNNNNNNNGG 2 cut(s) 228, 722
Bse1I ACTGG 1 cut(s) 713
BseBI CCWGG 1 cut(s) 945
BseDI CCNNGG 4 cut(s) 177, 223, 340, 571
BseGI GGATG 1 cut(s) 731
BseLI CCNNNNNNNGG 2 cut(s) 228, 722
BseMII CTCAG 2 cut(s) 298, 840
BseNI ACTGG 1 cut(s) 713
BseRI GAGGAG 1 cut(s) 1069
BseXI GCAGC 4 cut(s) 442, 568, 812, 949
BseYI CCCAGC 1 cut(s) 94
BsgI GTGCAG 2 cut(s) 135, 567
BshFI GGCC 2 cut(s) 515, 859
BshNI GGYRCC 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 292
BsiSI CCGG 2 cut(s) 695, 1020
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 2 cut(s) 228, 722
BsmAI GTCTC 2 cut(s) 271, 525
BsmFI GGGAC 1 cut(s) 403
BsmI GAATGC 3 cut(s) 428, 648, 989
BsnI GGCC 2 cut(s) 515, 859
Bsp119I TTCGAA 1 cut(s) 363
Bsp1286I GDGCHC 1 cut(s) 292
Bsp1407I TGTACA 1 cut(s) 630
Bsp143I GATC 1 cut(s) 657
Bsp19I CCATGG 1 cut(s) 340
BspACI CCGC 3 cut(s) 209, 433, 601
BspANI GGCC 2 cut(s) 515, 859
BspCNI CTCAG 2 cut(s) 297, 841
BspHI TCATGA 2 cut(s) 373, 1050
BspLI GGNNCC 4 cut(s) 145, 175, 568, 677
BspMI ACCTGC 1 cut(s) 979
BspT104I TTCGAA 1 cut(s) 363
BspT107I GGYRCC 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 630
BsrI ACTGG 1 cut(s) 713
BssECI CCNNGG 4 cut(s) 177, 223, 340, 571
BssMI GATC 1 cut(s) 657
BssT1I CCWWGG 2 cut(s) 223, 340
Bst2UI CCWGG 1 cut(s) 945
BstAPI GCANNNNNTGC 1 cut(s) 971
BstAUI TGTACA 1 cut(s) 630
BstBI TTCGAA 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 428, 599
BstDEI CTNAG 2 cut(s) 284, 849
BstDSI CCRYGG 2 cut(s) 340, 571
BstF5I GGATG 1 cut(s) 731
BstKTI GATC 1 cut(s) 660
BstMAI GTCTC 2 cut(s) 271, 525
BstMBI GATC 1 cut(s) 657
BstMWI GCNNNNNNNGC 1 cut(s) 971
BstNI CCWGG 1 cut(s) 945
BstSCI CCNGG 1 cut(s) 943
BstV1I GCAGC 4 cut(s) 442, 568, 812, 949
BstV2I GAAGAC 2 cut(s) 41, 248
BstXI CCANNNNNNTGG 1 cut(s) 94
BsuRI GGCC 2 cut(s) 515, 859
BtgI CCRYGG 2 cut(s) 340, 571
BtsCI GGATG 1 cut(s) 731
BtsI GCAGTG 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 162
BveI ACCTGC 1 cut(s) 979
Cac8I GCNNGC 2 cut(s) 428, 599
CciI TCATGA 2 cut(s) 373, 1050
Csp6I GTAC 7 cut(s) 174, 219, 415, 631, 934, 948, 1041
CviAII CATG 5 cut(s) 205, 260, 341, 374, 1051
CviQI GTAC 7 cut(s) 174, 219, 415, 631, 934, 948, 1041
DdeI CTNAG 2 cut(s) 284, 849
DpnI GATC 1 cut(s) 659
DpnII GATC 1 cut(s) 657
EaeI YGGCCR 1 cut(s) 513
EciI GGCGGA 1 cut(s) 224
Eco130I CCWWGG 2 cut(s) 223, 340
Eco147I AGGCCT 1 cut(s) 859
Eco57I CTGAAG 1 cut(s) 47
EcoRII CCWGG 1 cut(s) 943
EcoT14I CCWWGG 2 cut(s) 223, 340
ErhI CCWWGG 2 cut(s) 223, 340
FaeI CATG 5 cut(s) 208, 263, 344, 377, 1054
FaqI GGGAC 1 cut(s) 403
FatI CATG 5 cut(s) 204, 259, 340, 373, 1050
Fnu4HI GCNGC 4 cut(s) 431, 582, 801, 963
FokI GGATG 1 cut(s) 738
Fsp4HI GCNGC 4 cut(s) 431, 582, 801, 963
FspBI CTAG 5 cut(s) 396, 680, 752, 984, 1080
GluI GCNGC 4 cut(s) 431, 582, 801, 963
GsaI CCCAGC 1 cut(s) 98
HaeIII GGCC 2 cut(s) 515, 859
HapII CCGG 2 cut(s) 695, 1020
Hin1II CATG 5 cut(s) 208, 263, 344, 377, 1054
HindIII AAGCTT 1 cut(s) 368
HinfI GANTC 7 cut(s) 232, 360, 538, 688, 700, 1001, 1029
HpaII CCGG 2 cut(s) 695, 1020
HphI GGTGA 3 cut(s) 76, 758, 889
Hpy166II GTNNAC 4 cut(s) 442, 481, 631, 749
Hpy188I TCNGA 6 cut(s) 15, 44, 66, 181, 287, 850
Hpy188III TCNNGA 4 cut(s) 102, 374, 704, 1051
Hpy8I GTNNAC 4 cut(s) 442, 481, 631, 749
HpyAV CCTTC 4 cut(s) 154, 666, 884, 924
HpyCH4V TGCA 8 cut(s) 71, 116, 155, 383, 584, 965, 974, 989
HpyF10VI GCNNNNNNNGC 1 cut(s) 971
HpyF3I CTNAG 2 cut(s) 284, 849
Hsp92II CATG 5 cut(s) 208, 263, 344, 377, 1054
KpnI GGTACC 1 cut(s) 177
Kzo9I GATC 1 cut(s) 657
LmnI GCTCC 1 cut(s) 893
Lsp1109I GCAGC 4 cut(s) 442, 568, 812, 949
LweI GCATC 2 cut(s) 930, 1085
MaeI CTAG 5 cut(s) 396, 680, 752, 984, 1080
MalI GATC 1 cut(s) 659
MboI GATC 1 cut(s) 657
MboII GAAGA 7 cut(s) 46, 206, 248, 431, 681, 742, 767
MhlI GDGCHC 1 cut(s) 292
MlsI TGGCCA 1 cut(s) 515
MluCI AATT 7 cut(s) 8, 189, 200, 378, 903, 918, 1065
MluNI TGGCCA 1 cut(s) 515
MlyI GAGTC 2 cut(s) 532, 709
MmeI TCCRAC 1 cut(s) 549
MnlI CCTC 9 cut(s) 98, 187, 293, 392, 555, 790, 849, 1015, 1047
Mox20I TGGCCA 1 cut(s) 515
MroXI GAANNNNTTC 2 cut(s) 369, 465
MscI TGGCCA 1 cut(s) 515
MseI TTAA 1 cut(s) 921
MslI CAYNNNNRTG 1 cut(s) 621
Msp20I TGGCCA 1 cut(s) 515
MspA1I CMGCKG 1 cut(s) 433
MspI CCGG 2 cut(s) 695, 1020
MspR9I CCNGG 1 cut(s) 945
Mva1269I GAATGC 3 cut(s) 428, 648, 989
MvaI CCWGG 1 cut(s) 945
MwoI GCNNNNNNNGC 1 cut(s) 971
NcoI CCATGG 1 cut(s) 340
NdeII GATC 1 cut(s) 657
NlaIII CATG 5 cut(s) 208, 263, 344, 377, 1054
NlaIV GGNNCC 4 cut(s) 145, 175, 568, 677
NspV TTCGAA 1 cut(s) 363
OliI CACNNNNGTG 1 cut(s) 621
PagI TCATGA 2 cut(s) 373, 1050
PceI AGGCCT 1 cut(s) 859
PctI GAATGC 3 cut(s) 428, 648, 989
PdmI GAANNNNTTC 2 cut(s) 369, 465
PfeI GAWTC 5 cut(s) 232, 360, 688, 1001, 1029
PkrI GCNGC 4 cut(s) 432, 583, 802, 964
PleI GAGTC 2 cut(s) 532, 708
PpsI GAGTC 2 cut(s) 532, 708
PsiI TTATAA 1 cut(s) 123
Psp6I CCWGG 1 cut(s) 943
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 1 cut(s) 943
PspN4I GGNNCC 4 cut(s) 145, 175, 568, 677
RsaI GTAC 7 cut(s) 175, 220, 416, 632, 935, 949, 1042
RsaNI GTAC 7 cut(s) 174, 219, 415, 631, 934, 948, 1041
RseI CAYNNNNRTG 1 cut(s) 621
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 4 cut(s) 431, 582, 801, 963
Sau3AI GATC 1 cut(s) 657
ScaI AGTACT 1 cut(s) 935
SchI GAGTC 2 cut(s) 532, 709
ScrFI CCNGG 1 cut(s) 945
SduI GDGCHC 1 cut(s) 292
SfaNI GCATC 2 cut(s) 930, 1085
SfuI TTCGAA 1 cut(s) 363
SmiMI CAYNNNNRTG 1 cut(s) 621
SpeI ACTAGT 1 cut(s) 983
Sse9I AATT 7 cut(s) 8, 189, 200, 378, 903, 918, 1065
SseBI AGGCCT 1 cut(s) 859
SsiI CCGC 3 cut(s) 209, 433, 601
SspI AATATT 2 cut(s) 132, 466
SspMI CTAG 5 cut(s) 396, 680, 752, 984, 1080
StuI AGGCCT 1 cut(s) 859
StyD4I CCNGG 1 cut(s) 943
StyI CCWWGG 2 cut(s) 223, 340
TaqI TCGA 2 cut(s) 363, 993
TasI AATT 7 cut(s) 8, 189, 200, 378, 903, 918, 1065
TatI WGTACW 2 cut(s) 630, 933
TfiI GAWTC 5 cut(s) 232, 360, 688, 1001, 1029
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TscAI CASTG 1 cut(s) 162
TseI GCWGC 4 cut(s) 430, 581, 800, 962
TspDTI ATGAA 7 cut(s) 17, 193, 224, 248, 362, 390, 798
TspRI CASTG 1 cut(s) 162
XapI RAATTY 2 cut(s) 8, 903
XcmI CCANNNNNNNNNTGG 1 cut(s) 723
XmnI GAANNNNTTC 2 cut(s) 369, 465
XspI CTAG 5 cut(s) 396, 680, 752, 984, 1080
ZrmI AGTACT 1 cut(s) 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.