Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000690

Physical Location & Seq

Genomic Coordinates Forward (+)

16717581 .. 16723665

Gene Structure 6085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00346060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGCTATCAACCGAGACTCCACTCCCCCTCCAAAGATCGGCAAGATTGGGCCTTACACTGTGTTCATGACTCCACCCTCCACTCCAAAACCACCAGAAGAACAACAACAACAGCAGCAACAGCAACAGCAACAGCCCATCTTTGATTCTCCCAAGAAAGTTGTCCTGCCTCCGGTCCAGCCGCCGCCTCAGCAGTTTGTGAACCCGGTCGCCGGCGATGGCTCTGTTGTTGGGTTCTTCAAGAATGCTGTCACTAAAGTGCAGAATGGGGATGGTTTCATTGATCTTTCATTGGCTAGTGACATAGTGAGTGAGCTAGTGTTGTTGTTTGCTTGTCTTGCAGCACATTCGAGTTTGGATGATCACTTGGCGCGCTGGTTTGGGTTGAACCAGTCAAAGTATCAGTGGGCACTTGATGATTATTATGAGAGCAAGGGATTGGAAAAGGGCAATGTTAAAGCACAAGAGGTATCTAGCAAAATGCAGAGTAAAACTATTTATTCTGCTGTACTCTATCTCCTGTTAAATGTCGAGTTGCTCGAGTACACCGCCAAGCAGTGGACAATAGTCGTTTTTGTGAAGATCACATTATTGGTTGCAGTATGCAGGAAAAGGAATCAGAGTAGGATTTCTGATAAACCAAGTTTTCTCACTCTCACAATGGACAAATTTCTGAATGACATGGAAAGAGAGAAGCCCATCAGATTTACTTCTCAACAACTTCGGATTGCAACTGATAACTTCACCAACTTGCTGGGATCAGGAGGGTTTGGTGCAGTTTATAAAGGAATATTTAGTAATGGAACCCTTGTGGCAGTCAAGGTTCTGAATGGTACCTCTGACAAGAGAATTGAAGAACAATTCATGGCGGAAGTTAGTACCCTTGGCAGGATTCATCATTTCAACTTGGTTCGTCTTCATGGTTTCTGCTTTGAGAGACACCTCAGAGCACTTGTTTATGAGTATATGCCAAATGGTTCACTTGACAAGTTTCTGTTCCATGGAAACAGGATTGTAGGATTCGAAAAGCTTCATGACATTGCGGTTGGGACAGCTAGAGGGATTGCTTACTTGCACGAAGAATGCCAGCAGCGAATAGTCCACTACGACATAAAGCCTGAAAATATTCTTTTGGATGTGAACTTCTTTCCTAAAGTAGCTGATTTTGGTTTGGCCAAGCTGTCCAACAGAGATAACACTCATATAACAATGACAGGGGGAGGGGAACTCCTGGTTATGCTGCACCAGAAGTTTGGCTGCGGTTTCCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

423

Amino Acids

47.57

Weight (kDa)

8.62

Isoelectric Point (pI)

37.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	248 - 403	1.7e-33	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	250 - 401	8.5e-32	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g07910
malus_domestica	MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica	Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis	pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis	RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata	RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora	Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa	Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha	Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana	Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
Acc65I	GGTACC	1 cut(s)	833
AccB1I	GGYRCC	1 cut(s)	833
AccB7I	CCANNNNNTGG	1 cut(s)	558
AccII	CGCG	1 cut(s)	373
AciI	CCGC	6 cut(s)	182, 185, 549, 869, 1043, 1260
AclWI	GGATC	1 cut(s)	766
AcoI	YGGCCR	1 cut(s)	1173
AcsI	RAATTY	1 cut(s)	668
AfaI	GTAC	4 cut(s)	510, 545, 835, 880
AfiI	CCNNNNNNNGG	5 cut(s)	38, 172, 212, 558, 888
AgsI	TTSAA	4 cut(s)	241, 388, 854, 904
AjnI	CCWGG	1 cut(s)	1230
AleI	CACNNNNGTG	1 cut(s)	257
AluBI	AGCT	5 cut(s)	316, 1030, 1055, 1160, 1180
AluI	AGCT	5 cut(s)	316, 1030, 1055, 1160, 1180
Alw21I	GWGCWC	1 cut(s)	952
Alw26I	GTCTC	2 cut(s)	9, 931
AlwI	GGATC	1 cut(s)	766
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	2 cut(s)	50, 1173
ApeKI	GCWGC	5 cut(s)	115, 341, 1090, 1240, 1257
ApoI	RAATTY	1 cut(s)	668
Asp700I	GAANNNNTTC	2 cut(s)	1029, 1125
Asp718I	GGTACC	1 cut(s)	833
AspLEI	GCGC	2 cut(s)	373, 375
AspS9I	GGNCC	2 cut(s)	50, 175
AsuC2I	CCSGG	1 cut(s)	206
AsuHPI	GGTGA	1 cut(s)	736
AsuII	TTCGAA	1 cut(s)	1023
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	1 cut(s)	175
BaeGI	GKGCMC	1 cut(s)	412
BalI	TGGCCA	1 cut(s)	1175
BanI	GGYRCC	1 cut(s)	833
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	1 cut(s)	952
BbvCI	CCTCAGC	1 cut(s)	189
BbvI	GCAGC	5 cut(s)	127, 353, 1102, 1227, 1244
BccI	CCATC	4 cut(s)	146, 212, 266, 707
BcgI	CGANNNNNNTGC	2 cut(s)	330, 364
BciT130I	CCWGG	1 cut(s)	1232
BclI	TGATCA	1 cut(s)	361
BcnI	CCSGG	1 cut(s)	206
BcoDI	GTCTC	2 cut(s)	9, 931
BfaI	CTAG	4 cut(s)	297, 317, 474, 1056
BisI	GCNGC	7 cut(s)	116, 182, 185, 342, 1091, 1241, 1258
BlsI	GCNGC	7 cut(s)	117, 183, 186, 343, 1092, 1242, 1259
Bme1390I	CCNGG	2 cut(s)	206, 1232
Bme18I	GGWCC	1 cut(s)	175
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	2 cut(s)	50, 175
BmiI	GGNNCC	2 cut(s)	805, 835
BmrFI	CCNGG	2 cut(s)	206, 1232
BoxI	GACNNNNGTC	1 cut(s)	566
BpiI	GAAGAC	1 cut(s)	908
BplI	GAGNNNNNCTC	2 cut(s)	1212, 1244
Bpu10I	CCTNAGC	1 cut(s)	189
Bpu14I	TTCGAA	1 cut(s)	1023
BpuMI	CCSGG	1 cut(s)	206
BsaJI	CCNNGG	2 cut(s)	883, 1000
BsaWI	WCCGGW	1 cut(s)	172
BsaXI	ACNNNNNCTCC	5 cut(s)	13, 32, 43, 501, 531
Bsc4I	CCNNNNNNNGG	5 cut(s)	38, 172, 212, 558, 888
Bse118I	RCCGGY	1 cut(s)	212
Bse1I	ACTGG	1 cut(s)	391
Bse3DI	GCAATG	2 cut(s)	457, 1038
BseBI	CCWGG	1 cut(s)	1232
BseDI	CCNNGG	2 cut(s)	883, 1000
BseGI	GGATG	3 cut(s)	277, 364, 1141
BseLI	CCNNNNNNNGG	5 cut(s)	38, 172, 212, 558, 888
BseMI	GCAATG	2 cut(s)	457, 1038
BseMII	CTCAG	2 cut(s)	203, 958
BseNI	ACTGG	1 cut(s)	391
BsePI	GCGCGC	1 cut(s)	371
BseSI	GKGCMC	1 cut(s)	412
BseXI	GCAGC	5 cut(s)	127, 353, 1102, 1227, 1244
BseYI	CCCAGC	1 cut(s)	754
BsgI	GTGCAG	3 cut(s)	281, 795, 1226
Bsh1236I	CGCG	1 cut(s)	373
Bsh1285I	CGRYCG	1 cut(s)	210
BshFI	GGCC	2 cut(s)	52, 1175
BshNI	GGYRCC	1 cut(s)	833
BsiEI	CGRYCG	1 cut(s)	210
BsiHKAI	GWGCWC	1 cut(s)	952
BsiHKCI	CYCGRG	1 cut(s)	539
BsiSI	CCGG	3 cut(s)	173, 206, 213
BslFI	GGGAC	1 cut(s)	1063
BslI	CCNNNNNNNGG	5 cut(s)	38, 172, 212, 558, 888
BsmAI	GTCTC	2 cut(s)	9, 931
BsmFI	GGGAC	1 cut(s)	1063
BsmI	GAATGC	2 cut(s)	250, 1088
BsnI	GGCC	2 cut(s)	52, 1175
BsoBI	CYCGRG	1 cut(s)	539
Bsp119I	TTCGAA	1 cut(s)	1023
Bsp1286I	GDGCHC	2 cut(s)	412, 952
Bsp143I	GATC	5 cut(s)	36, 283, 361, 582, 758
Bsp19I	CCATGG	1 cut(s)	1000
BspACI	CCGC	6 cut(s)	182, 185, 549, 869, 1043, 1260
BspANI	GGCC	2 cut(s)	52, 1175
BspCNI	CTCAG	2 cut(s)	202, 957
BspFNI	CGCG	1 cut(s)	373
BspHI	TCATGA	2 cut(s)	66, 1033
BspLI	GGNNCC	2 cut(s)	805, 835
BspPI	GGATC	1 cut(s)	766
BspT104I	TTCGAA	1 cut(s)	1023
BspT107I	GGYRCC	1 cut(s)	833
BsrDI	GCAATG	2 cut(s)	457, 1038
BsrFI	RCCGGY	1 cut(s)	212
BsrI	ACTGG	1 cut(s)	391
BssAI	RCCGGY	1 cut(s)	212
BssECI	CCNNGG	2 cut(s)	883, 1000
BssHII	GCGCGC	1 cut(s)	371
BssMI	GATC	5 cut(s)	36, 283, 361, 582, 758
BssT1I	CCWWGG	2 cut(s)	883, 1000
Bst2UI	CCWGG	1 cut(s)	1232
Bst4CI	ACNGT	1 cut(s)	61
BstBI	TTCGAA	1 cut(s)	1023
BstC8I	GCNNGC	3 cut(s)	214, 373, 1088
BstDEI	CTNAG	2 cut(s)	189, 944
BstDSI	CCRYGG	1 cut(s)	1000
BstF5I	GGATG	3 cut(s)	277, 364, 1141
BstFNI	CGCG	1 cut(s)	373
BstHHI	GCGC	2 cut(s)	373, 375
BstKTI	GATC	5 cut(s)	39, 286, 364, 585, 761
BstMAI	GTCTC	2 cut(s)	9, 931
BstMBI	GATC	5 cut(s)	36, 283, 361, 582, 758
BstMCI	CGRYCG	1 cut(s)	210
BstMWI	GCNNNNNNNGC	3 cut(s)	121, 190, 338
BstNI	CCWGG	1 cut(s)	1232
BstPAI	GACNNNNGTC	1 cut(s)	566
BstSCI	CCNGG	2 cut(s)	204, 1230
BstSLI	GKGCMC	1 cut(s)	412
BstUI	CGCG	1 cut(s)	373
BstV1I	GCAGC	5 cut(s)	127, 353, 1102, 1227, 1244
BstV2I	GAAGAC	1 cut(s)	908
BstXI	CCANNNNNNTGG	2 cut(s)	754, 1253
BsuRI	GGCC	2 cut(s)	52, 1175
BtgI	CCRYGG	1 cut(s)	1000
BtgZI	GCGATG	1 cut(s)	231
BtsCI	GGATG	3 cut(s)	277, 364, 1141
BtsI	GCAGTG	1 cut(s)	563
BtsIMutI	CAGTG	3 cut(s)	57, 410, 563
Cac8I	GCNNGC	3 cut(s)	214, 373, 1088
CciI	TCATGA	2 cut(s)	66, 1033
CfoI	GCGC	2 cut(s)	373, 375
Cfr10I	RCCGGY	1 cut(s)	212
Cfr13I	GGNCC	2 cut(s)	50, 175
Csp6I	GTAC	4 cut(s)	509, 544, 834, 879
CviAII	CATG	6 cut(s)	67, 682, 865, 920, 1001, 1034
CviQI	GTAC	4 cut(s)	509, 544, 834, 879
DdeI	CTNAG	2 cut(s)	189, 944
DpnI	GATC	5 cut(s)	38, 285, 363, 584, 760
DpnII	GATC	5 cut(s)	36, 283, 361, 582, 758
EaeI	YGGCCR	1 cut(s)	1173
EciI	GGCGGA	1 cut(s)	884
Eco130I	CCWWGG	2 cut(s)	883, 1000
Eco47I	GGWCC	1 cut(s)	175
Eco88I	CYCGRG	1 cut(s)	539
EcoRII	CCWGG	1 cut(s)	1230
EcoT14I	CCWWGG	2 cut(s)	883, 1000
ErhI	CCWWGG	2 cut(s)	883, 1000
FaeI	CATG	6 cut(s)	70, 685, 868, 923, 1004, 1037
FaqI	GGGAC	1 cut(s)	1063
FatI	CATG	6 cut(s)	66, 681, 864, 919, 1000, 1033
FbaI	TGATCA	1 cut(s)	361
Fnu4HI	GCNGC	7 cut(s)	116, 182, 185, 342, 1091, 1241, 1258
FokI	GGATG	3 cut(s)	284, 371, 1148
Fsp4HI	GCNGC	7 cut(s)	116, 182, 185, 342, 1091, 1241, 1258
FspBI	CTAG	4 cut(s)	297, 317, 474, 1056
GlaI	GCGC	2 cut(s)	372, 374
GluI	GCNGC	7 cut(s)	116, 182, 185, 342, 1091, 1241, 1258
GsaI	CCCAGC	1 cut(s)	758
HaeIII	GGCC	2 cut(s)	52, 1175
HapII	CCGG	3 cut(s)	173, 206, 213
HhaI	GCGC	2 cut(s)	373, 375
Hin1II	CATG	6 cut(s)	70, 685, 868, 923, 1004, 1037
Hin6I	GCGC	2 cut(s)	371, 373
HinP1I	GCGC	2 cut(s)	371, 373
HindIII	AAGCTT	1 cut(s)	1028
HinfI	GANTC	6 cut(s)	17, 70, 146, 616, 892, 1020
HpaII	CCGG	3 cut(s)	173, 206, 213
HphI	GGTGA	1 cut(s)	736
Hpy166II	GTNNAC	6 cut(s)	202, 546, 561, 980, 1102, 1141
Hpy188I	TCNGA	8 cut(s)	621, 634, 675, 704, 726, 828, 841, 947
Hpy188III	TCNNGA	4 cut(s)	67, 241, 762, 1034
Hpy8I	GTNNAC	6 cut(s)	202, 546, 561, 980, 1102, 1141
HpyCH4III	ACNGT	1 cut(s)	61
HpyCH4V	TGCA	9 cut(s)	262, 341, 484, 599, 606, 731, 776, 1075, 1243
HpyF10VI	GCNNNNNNNGC	3 cut(s)	121, 190, 338
HpyF3I	CTNAG	2 cut(s)	189, 944
Hsp92II	CATG	6 cut(s)	70, 685, 868, 923, 1004, 1037
HspAI	GCGC	2 cut(s)	371, 373
KpnI	GGTACC	1 cut(s)	837
KroI	GCCGGC	1 cut(s)	212
KroNI	GCCGGC	1 cut(s)	214
Ksp22I	TGATCA	1 cut(s)	361
Kzo9I	GATC	5 cut(s)	36, 283, 361, 582, 758
Lsp1109I	GCAGC	5 cut(s)	127, 353, 1102, 1227, 1244
MaeI	CTAG	4 cut(s)	297, 317, 474, 1056
MaeIII	GTNAC	2 cut(s)	250, 299
MalI	GATC	5 cut(s)	38, 285, 363, 584, 760
MboI	GATC	5 cut(s)	36, 283, 361, 582, 758
MboII	GAAGA	6 cut(s)	110, 229, 592, 866, 908, 1091
MhlI	GDGCHC	2 cut(s)	412, 952
MlsI	TGGCCA	1 cut(s)	1175
MluCI	AATT	3 cut(s)	668, 849, 860
MluNI	TGGCCA	1 cut(s)	1175
MlyI	GAGTC	2 cut(s)	11, 64
MmeI	TCCRAC	1 cut(s)	1209
Mox20I	TGGCCA	1 cut(s)	1175
MreI	CGCCGGCG	1 cut(s)	212
MroNI	GCCGGC	1 cut(s)	212
MroXI	GAANNNNTTC	2 cut(s)	1029, 1125
MscI	TGGCCA	1 cut(s)	1175
MseI	TTAA	2 cut(s)	456, 524
MslI	CAYNNNNRTG	1 cut(s)	257
Msp20I	TGGCCA	1 cut(s)	1175
MspI	CCGG	3 cut(s)	173, 206, 213
MspR9I	CCNGG	2 cut(s)	206, 1232
Mva1269I	GAATGC	2 cut(s)	250, 1088
MvaI	CCWGG	1 cut(s)	1232
MvnI	CGCG	1 cut(s)	373
MwoI	GCNNNNNNNGC	3 cut(s)	121, 190, 338
NaeI	GCCGGC	1 cut(s)	214
NciI	CCSGG	1 cut(s)	206
NcoI	CCATGG	1 cut(s)	1000
NdeII	GATC	5 cut(s)	36, 283, 361, 582, 758
NgoMIV	GCCGGC	1 cut(s)	212
NlaIII	CATG	6 cut(s)	70, 685, 868, 923, 1004, 1037
NlaIV	GGNNCC	2 cut(s)	805, 835
NmuCI	GTSAC	2 cut(s)	250, 299
NspV	TTCGAA	1 cut(s)	1023
OliI	CACNNNNGTG	1 cut(s)	257
PaeR7I	CTCGAG	1 cut(s)	539
PagI	TCATGA	2 cut(s)	66, 1033
PauI	GCGCGC	1 cut(s)	371
PcsI	WCGNNNNNNNCGW	1 cut(s)	537
PctI	GAATGC	2 cut(s)	250, 1088
PdiI	GCCGGC	1 cut(s)	214
PdmI	GAANNNNTTC	2 cut(s)	1029, 1125
PfeI	GAWTC	4 cut(s)	146, 616, 892, 1020
PflMI	CCANNNNNTGG	1 cut(s)	558
PkrI	GCNGC	7 cut(s)	117, 183, 186, 343, 1092, 1242, 1259
PleI	GAGTC	2 cut(s)	11, 64
PpsI	GAGTC	2 cut(s)	11, 64
PshAI	GACNNNNGTC	1 cut(s)	566
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	1 cut(s)	1230
PspFI	CCCAGC	1 cut(s)	754
PspGI	CCWGG	1 cut(s)	1230
PspN4I	GGNNCC	2 cut(s)	805, 835
PspPI	GGNCC	2 cut(s)	50, 175
PspXI	VCTCGAGB	1 cut(s)	539
PteI	GCGCGC	1 cut(s)	371
RsaI	GTAC	4 cut(s)	510, 545, 835, 880
RsaNI	GTAC	4 cut(s)	509, 544, 834, 879
RseI	CAYNNNNRTG	1 cut(s)	257
SaqAI	TTAA	2 cut(s)	456, 524
SatI	GCNGC	7 cut(s)	116, 182, 185, 342, 1091, 1241, 1258
Sau3AI	GATC	5 cut(s)	36, 283, 361, 582, 758
Sau96I	GGNCC	2 cut(s)	50, 175
SchI	GAGTC	2 cut(s)	11, 64
ScrFI	CCNGG	2 cut(s)	206, 1232
SduI	GDGCHC	2 cut(s)	412, 952
SetI	ASST	9 cut(s)	318, 471, 825, 839, 945, 1032, 1057, 1162, 1182
Sfr274I	CTCGAG	1 cut(s)	539
SfuI	TTCGAA	1 cut(s)	1023
SgrAI	CRCCGGYG	1 cut(s)	212
SinI	GGWCC	1 cut(s)	175
SlaI	CTCGAG	1 cut(s)	539
SmiMI	CAYNNNNRTG	1 cut(s)	257
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
Sse9I	AATT	3 cut(s)	668, 849, 860
SsiI	CCGC	6 cut(s)	182, 185, 549, 869, 1043, 1260
SspI	AATATT	2 cut(s)	792, 1126
SspMI	CTAG	4 cut(s)	297, 317, 474, 1056
StyD4I	CCNGG	2 cut(s)	204, 1230
StyI	CCWWGG	2 cut(s)	883, 1000
TaaI	ACNGT	1 cut(s)	61
TaqI	TCGA	4 cut(s)	350, 531, 540, 1023
TasI	AATT	3 cut(s)	668, 849, 860
TatI	WGTACW	2 cut(s)	508, 543
TauI	GCSGC	2 cut(s)	184, 187
TfiI	GAWTC	4 cut(s)	146, 616, 892, 1020
Tru1I	TTAA	2 cut(s)	456, 524
Tru9I	TTAA	2 cut(s)	456, 524
TscAI	CASTG	3 cut(s)	64, 410, 563
TseFI	GTSAC	2 cut(s)	250, 299
TseI	GCWGC	5 cut(s)	115, 341, 1090, 1240, 1257
Tsp45I	GTSAC	2 cut(s)	250, 299
TspDTI	ATGAA	7 cut(s)	55, 268, 279, 853, 884, 908, 1022
TspRI	CASTG	3 cut(s)	64, 410, 563
Van91I	CCANNNNNTGG	1 cut(s)	558
VpaK11BI	GGWCC	1 cut(s)	175
XapI	RAATTY	1 cut(s)	668
XhoI	CTCGAG	1 cut(s)	539
XmnI	GAANNNNTTC	2 cut(s)	1029, 1125
XspI	CTAG	4 cut(s)	297, 317, 474, 1056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.