Belongs to the protein kinase superfamily
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AUX_IAA | PF02309 | 14 - 228 | 1.5e-86 | AUX/IAA family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 69 |
| AclI | AACGTT | 1 cut(s) | 303 |
| AclWI | GGATC | 3 cut(s) | 230, 540, 664 |
| AcoI | YGGCCR | 1 cut(s) | 275 |
| AfaI | GTAC | 4 cut(s) | 100, 340, 419, 547 |
| AgsI | TTSAA | 3 cut(s) | 31, 37, 412 |
| AluBI | AGCT | 6 cut(s) | 8, 49, 426, 436, 465, 711 |
| AluI | AGCT | 6 cut(s) | 8, 49, 426, 436, 465, 711 |
| Alw21I | GWGCWC | 2 cut(s) | 323, 388 |
| Alw26I | GTCTC | 3 cut(s) | 35, 128, 576 |
| Alw44I | GTGCAC | 1 cut(s) | 384 |
| AlwI | GGATC | 3 cut(s) | 230, 540, 664 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 711 |
| AoxI | GGCC | 2 cut(s) | 275, 489 |
| ApaI | GGGCCC | 1 cut(s) | 493 |
| ApaLI | GTGCAC | 1 cut(s) | 384 |
| ApeKI | GCWGC | 2 cut(s) | 74, 356 |
| AspLEI | GCGC | 3 cut(s) | 288, 313, 639 |
| AspS9I | GGNCC | 2 cut(s) | 489, 490 |
| AsuC2I | CCSGG | 1 cut(s) | 66 |
| AsuHPI | GGTGA | 2 cut(s) | 463, 611 |
| AxyI | CCTNAGG | 1 cut(s) | 105 |
| BaeGI | GKGCMC | 2 cut(s) | 388, 493 |
| BalI | TGGCCA | 1 cut(s) | 277 |
| BanII | GRGCYC | 1 cut(s) | 493 |
| Bbv12I | GWGCWC | 2 cut(s) | 323, 388 |
| BbvI | GCAGC | 2 cut(s) | 61, 343 |
| BccI | CCATC | 4 cut(s) | 374, 523, 572, 682 |
| BcnI | CCSGG | 1 cut(s) | 66 |
| BcoDI | GTCTC | 3 cut(s) | 35, 128, 576 |
| BfmI | CTRYAG | 1 cut(s) | 292 |
| BfoI | RGCGCY | 1 cut(s) | 640 |
| BglII | AGATCT | 2 cut(s) | 93, 172 |
| BisI | GCNGC | 2 cut(s) | 75, 357 |
| BlsI | GCNGC | 2 cut(s) | 76, 358 |
| BmcAI | AGTACT | 2 cut(s) | 340, 547 |
| Bme1390I | CCNGG | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 2 cut(s) | 489, 490 |
| BmiI | GGNNCC | 2 cut(s) | 490, 491 |
| BmrFI | CCNGG | 1 cut(s) | 66 |
| BmsI | GCATC | 2 cut(s) | 433, 579 |
| BpuMI | CCSGG | 1 cut(s) | 66 |
| BsaI | GGTCTC | 2 cut(s) | 35, 128 |
| BsaJI | CCNNGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| BsaWI | WCCGGW | 1 cut(s) | 113 |
| Bse118I | RCCGGY | 1 cut(s) | 323 |
| Bse1I | ACTGG | 2 cut(s) | 281, 590 |
| Bse21I | CCTNAGG | 1 cut(s) | 105 |
| BseDI | CCNNGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| BseGI | GGATG | 3 cut(s) | 385, 583, 594 |
| BseMII | CTCAG | 2 cut(s) | 339, 540 |
| BseNI | ACTGG | 2 cut(s) | 281, 590 |
| BseRI | GAGGAG | 1 cut(s) | 344 |
| BseSI | GKGCMC | 2 cut(s) | 388, 493 |
| BseXI | GCAGC | 2 cut(s) | 61, 343 |
| BshFI | GGCC | 2 cut(s) | 277, 491 |
| BsiHKAI | GWGCWC | 2 cut(s) | 323, 388 |
| BsiSI | CCGG | 5 cut(s) | 16, 66, 89, 114, 324 |
| BsmAI | GTCTC | 3 cut(s) | 35, 128, 576 |
| BsmI | GAATGC | 1 cut(s) | 359 |
| BsnI | GGCC | 2 cut(s) | 277, 491 |
| Bso31I | GGTCTC | 2 cut(s) | 35, 128 |
| Bsp120I | GGGCCC | 1 cut(s) | 489 |
| Bsp1286I | GDGCHC | 3 cut(s) | 323, 388, 493 |
| Bsp1407I | TGTACA | 1 cut(s) | 417 |
| Bsp143I | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| Bsp19I | CCATGG | 2 cut(s) | 474, 608 |
| BspACI | CCGC | 1 cut(s) | 69 |
| BspANI | GGCC | 2 cut(s) | 277, 491 |
| BspCNI | CTCAG | 2 cut(s) | 340, 541 |
| BspHI | TCATGA | 1 cut(s) | 510 |
| BspLI | GGNNCC | 2 cut(s) | 490, 491 |
| BspPI | GGATC | 3 cut(s) | 230, 540, 664 |
| BspQI | GCTCTTC | 1 cut(s) | 311 |
| BspTNI | GGTCTC | 2 cut(s) | 35, 128 |
| BsrFI | RCCGGY | 1 cut(s) | 323 |
| BsrGI | TGTACA | 1 cut(s) | 417 |
| BsrI | ACTGG | 2 cut(s) | 281, 590 |
| BssAI | RCCGGY | 1 cut(s) | 323 |
| BssECI | CCNNGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| BssMI | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| BssT1I | CCWWGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| Bst4CI | ACNGT | 2 cut(s) | 139, 545 |
| Bst6I | CTCTTC | 1 cut(s) | 311 |
| BstAUI | TGTACA | 1 cut(s) | 417 |
| BstC8I | GCNNGC | 2 cut(s) | 635, 641 |
| BstDEI | CTNAG | 3 cut(s) | 105, 348, 549 |
| BstDSI | CCRYGG | 2 cut(s) | 474, 608 |
| BstF5I | GGATG | 3 cut(s) | 385, 583, 594 |
| BstH2I | RGCGCY | 1 cut(s) | 640 |
| BstHHI | GCGC | 3 cut(s) | 288, 313, 639 |
| BstKTI | GATC | 6 cut(s) | 96, 145, 175, 238, 535, 659 |
| BstMAI | GTCTC | 3 cut(s) | 35, 128, 576 |
| BstMBI | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 283, 333, 683 |
| BstSCI | CCNGG | 1 cut(s) | 64 |
| BstSFI | CTRYAG | 1 cut(s) | 292 |
| BstSLI | GKGCMC | 2 cut(s) | 388, 493 |
| BstV1I | GCAGC | 2 cut(s) | 61, 343 |
| BstX2I | RGATCY | 4 cut(s) | 93, 172, 235, 532 |
| BstYI | RGATCY | 4 cut(s) | 93, 172, 235, 532 |
| Bsu36I | CCTNAGG | 1 cut(s) | 105 |
| BsuRI | GGCC | 2 cut(s) | 277, 491 |
| BtgI | CCRYGG | 2 cut(s) | 474, 608 |
| BtgZI | GCGATG | 1 cut(s) | 701 |
| BtsCI | GGATG | 3 cut(s) | 385, 583, 594 |
| BtsIMutI | CAGTG | 1 cut(s) | 288 |
| Cac8I | GCNNGC | 2 cut(s) | 635, 641 |
| CaiI | CAGNNNCTG | 1 cut(s) | 711 |
| CciI | TCATGA | 1 cut(s) | 510 |
| CfoI | GCGC | 3 cut(s) | 288, 313, 639 |
| Cfr10I | RCCGGY | 1 cut(s) | 323 |
| Cfr13I | GGNCC | 2 cut(s) | 489, 490 |
| Csp6I | GTAC | 4 cut(s) | 99, 339, 418, 546 |
| CviAII | CATG | 5 cut(s) | 376, 475, 511, 609, 630 |
| CviQI | GTAC | 4 cut(s) | 99, 339, 418, 546 |
| DdeI | CTNAG | 3 cut(s) | 105, 348, 549 |
| DpnI | GATC | 6 cut(s) | 95, 144, 174, 237, 534, 658 |
| DpnII | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| EaeI | YGGCCR | 1 cut(s) | 275 |
| Eam1104I | CTCTTC | 1 cut(s) | 311 |
| EarI | CTCTTC | 1 cut(s) | 311 |
| Eco130I | CCWWGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| Eco24I | GRGCYC | 1 cut(s) | 493 |
| Eco31I | GGTCTC | 2 cut(s) | 35, 128 |
| Eco81I | CCTNAGG | 1 cut(s) | 105 |
| EcoO109I | RGGNCCY | 1 cut(s) | 489 |
| EcoT14I | CCWWGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| EcoT38I | GRGCYC | 1 cut(s) | 493 |
| ErhI | CCWWGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| FaeI | CATG | 5 cut(s) | 379, 478, 514, 612, 633 |
| FaiI | YATR | 9 cut(s) | 308, 377, 476, 486, 512, 555, 567, 610, 631 |
| FatI | CATG | 5 cut(s) | 375, 474, 510, 608, 629 |
| FauI | CCCGC | 1 cut(s) | 62 |
| Fnu4HI | GCNGC | 2 cut(s) | 75, 357 |
| FokI | GGATG | 3 cut(s) | 392, 590, 601 |
| FriOI | GRGCYC | 1 cut(s) | 493 |
| Fsp4HI | GCNGC | 2 cut(s) | 75, 357 |
| GlaI | GCGC | 3 cut(s) | 287, 312, 638 |
| GluI | GCNGC | 2 cut(s) | 75, 357 |
| HaeII | RGCGCY | 1 cut(s) | 640 |
| HaeIII | GGCC | 2 cut(s) | 277, 491 |
| HapII | CCGG | 5 cut(s) | 16, 66, 89, 114, 324 |
| HhaI | GCGC | 3 cut(s) | 288, 313, 639 |
| Hin1II | CATG | 5 cut(s) | 379, 478, 514, 612, 633 |
| Hin6I | GCGC | 3 cut(s) | 286, 311, 637 |
| HinP1I | GCGC | 3 cut(s) | 286, 311, 637 |
| HinfI | GANTC | 1 cut(s) | 626 |
| HpaII | CCGG | 5 cut(s) | 16, 66, 89, 114, 324 |
| HphI | GGTGA | 2 cut(s) | 463, 611 |
| Hpy166II | GTNNAC | 1 cut(s) | 386 |
| Hpy188I | TCNGA | 5 cut(s) | 133, 177, 442, 540, 661 |
| Hpy188III | TCNNGA | 2 cut(s) | 364, 511 |
| Hpy8I | GTNNAC | 1 cut(s) | 386 |
| HpyAV | CCTTC | 4 cut(s) | 230, 346, 361, 478 |
| HpyCH4III | ACNGT | 2 cut(s) | 139, 545 |
| HpyCH4IV | ACGT | 2 cut(s) | 303, 603 |
| HpyCH4V | TGCA | 5 cut(s) | 359, 375, 386, 633, 699 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 283, 333, 683 |
| HpyF3I | CTNAG | 3 cut(s) | 105, 348, 549 |
| HpySE526I | ACGT | 2 cut(s) | 303, 603 |
| Hsp92II | CATG | 5 cut(s) | 379, 478, 514, 612, 633 |
| HspAI | GCGC | 3 cut(s) | 286, 311, 637 |
| Kzo9I | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| LguI | GCTCTTC | 1 cut(s) | 311 |
| LmnI | GCTCC | 4 cut(s) | 293, 433, 470, 682 |
| Lsp1109I | GCAGC | 2 cut(s) | 61, 343 |
| LweI | GCATC | 2 cut(s) | 433, 579 |
| MaeII | ACGT | 2 cut(s) | 303, 603 |
| MaeIII | GTNAC | 3 cut(s) | 79, 479, 599 |
| MalI | GATC | 6 cut(s) | 95, 144, 174, 237, 534, 658 |
| MboI | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| MboII | GAAGA | 8 cut(s) | 31, 182, 195, 328, 386, 424, 527, 581 |
| MfeI | CAATTG | 1 cut(s) | 666 |
| MflI | RGATCY | 4 cut(s) | 93, 172, 235, 532 |
| MhlI | GDGCHC | 3 cut(s) | 323, 388, 493 |
| MlsI | TGGCCA | 1 cut(s) | 277 |
| MluCI | AATT | 1 cut(s) | 666 |
| MluNI | TGGCCA | 1 cut(s) | 277 |
| MnlI | CCTC | 3 cut(s) | 116, 322, 655 |
| Mox20I | TGGCCA | 1 cut(s) | 277 |
| MscI | TGGCCA | 1 cut(s) | 277 |
| MseI | TTAA | 1 cut(s) | 231 |
| Msp20I | TGGCCA | 1 cut(s) | 277 |
| MspI | CCGG | 5 cut(s) | 16, 66, 89, 114, 324 |
| MspR9I | CCNGG | 1 cut(s) | 66 |
| MunI | CAATTG | 1 cut(s) | 666 |
| Mva1269I | GAATGC | 1 cut(s) | 359 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 283, 333, 683 |
| NciI | CCSGG | 1 cut(s) | 66 |
| NcoI | CCATGG | 2 cut(s) | 474, 608 |
| NdeII | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| NlaIII | CATG | 5 cut(s) | 379, 478, 514, 612, 633 |
| NlaIV | GGNNCC | 2 cut(s) | 490, 491 |
| NmuCI | GTSAC | 2 cut(s) | 79, 599 |
| PagI | TCATGA | 1 cut(s) | 510 |
| PciSI | GCTCTTC | 1 cut(s) | 311 |
| PctI | GAATGC | 1 cut(s) | 359 |
| PfeI | GAWTC | 1 cut(s) | 626 |
| PkrI | GCNGC | 2 cut(s) | 76, 358 |
| Psp1406I | AACGTT | 1 cut(s) | 303 |
| PspN4I | GGNNCC | 2 cut(s) | 490, 491 |
| PspOMI | GGGCCC | 1 cut(s) | 489 |
| PspPI | GGNCC | 2 cut(s) | 489, 490 |
| PstNI | CAGNNNCTG | 1 cut(s) | 711 |
| PsuI | RGATCY | 4 cut(s) | 93, 172, 235, 532 |
| RsaI | GTAC | 4 cut(s) | 100, 340, 419, 547 |
| RsaNI | GTAC | 4 cut(s) | 99, 339, 418, 546 |
| SapI | GCTCTTC | 1 cut(s) | 311 |
| SaqAI | TTAA | 1 cut(s) | 231 |
| SatI | GCNGC | 2 cut(s) | 75, 357 |
| Sau3AI | GATC | 6 cut(s) | 93, 142, 172, 235, 532, 656 |
| Sau96I | GGNCC | 2 cut(s) | 489, 490 |
| ScaI | AGTACT | 2 cut(s) | 340, 547 |
| ScrFI | CCNGG | 1 cut(s) | 66 |
| SduI | GDGCHC | 3 cut(s) | 323, 388, 493 |
| SfaNI | GCATC | 2 cut(s) | 433, 579 |
| SfcI | CTRYAG | 1 cut(s) | 292 |
| SgrAI | CRCCGGYG | 1 cut(s) | 323 |
| Sse9I | AATT | 1 cut(s) | 666 |
| SsiI | CCGC | 1 cut(s) | 69 |
| StyD4I | CCNGG | 1 cut(s) | 64 |
| StyI | CCWWGG | 7 cut(s) | 55, 165, 207, 255, 474, 493, 608 |
| TaaI | ACNGT | 2 cut(s) | 139, 545 |
| TaiI | ACGT | 2 cut(s) | 306, 606 |
| TaqII | GACCGA | 2 cut(s) | 59, 98 |
| TasI | AATT | 1 cut(s) | 666 |
| TatI | WGTACW | 4 cut(s) | 98, 338, 417, 545 |
| TfiI | GAWTC | 1 cut(s) | 626 |
| Tru1I | TTAA | 1 cut(s) | 231 |
| Tru9I | TTAA | 1 cut(s) | 231 |
| TscAI | CASTG | 1 cut(s) | 288 |
| TseFI | GTSAC | 2 cut(s) | 79, 599 |
| TseI | GCWGC | 2 cut(s) | 74, 356 |
| Tsp45I | GTSAC | 2 cut(s) | 79, 599 |
| TspDTI | ATGAA | 5 cut(s) | 499, 527, 582, 618, 665 |
| TspRI | CASTG | 1 cut(s) | 288 |
| VneI | GTGCAC | 1 cut(s) | 384 |
| ZrmI | AGTACT | 2 cut(s) | 340, 547 |