RLG00000009151
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
47581407 .. 47582750
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009151

Sequence Viewer

Length: 1239 bp
ATGTCGAGAAATTATACTGCCGTTGCGGTTGCCGTTGTCGTTGTCGTTGCCCTTGCCGTTGCCGTTGCCGCTTTCGTTGTGAGTTACTTTGGAGATTCGAGTTACTTTGGAGGTGCAGTAGTTGCCATTGTTCTTGTAGCATTAGTAGTCTGTCTGATGATTGCTATCACAGTTGAAGTATGGAGGAATCGACGTGATCAGAAAGGTAGCAGCTCTGATGATCCGACACTCACAATGGATAATTTTCTAAATGACATGGAAAGAGAGAAGCCCATCAGGTTTACTTCTCTACAGCTTCGGATTGCAACTGATAACTTTATCAACTTGTTGGGTTCAGGAGGGTTTGGTTCAGTTTATAAAGGTGTATATAGTAATGGAACGCTTGTGGCAGTGAAGGTTCTAGGTGGTACCTCGGACAAGAGAATTGATGAGCAATTCATGGCGGAAGTTAGTACACTTGGCAGGATTCATCATGTCAATTTGGTTCGTCTCCATGGTTTCTGCTTCCACAGAGCGCTTGTTTATGAGTATATGTCAAATGGTTCGCTTGACAAGTTTCTTTTCCATGGAAACAAGATCTTAGGATTCGAAAAGCTTCATGAAATTGCAGTTGGGACAGCTAGAGGGATTGCTTACTTGCACGAAGAATGCCAGCAGCGAATAGTCCACTACGATATAAAACCTGGAAATATTCTTTTGGATGTGAATTTCTTCCCTAAAGTTGCTGATTTCGGTTTGGCCAAGCTGTGCAACAGGGACAATACTCATATATCAATGACAGGTGGGAGGGGAACTCCTGGTTATGCTGCACCAGAACTTTGGCTGGGGCTTCCTATAACCCACAAATGTGATGTGTACAGCTTTGGAATGCTGTTATTCGAGATTATAGGTAGAAGAAGGAACCTTGACCTTAATCTTACAGAGAGCCAATACTGGTTTCCAAGGTGGGGATGGAAGAAGTTTGAAGCTGGTGAACTAGGAGAACTAATGGCAGTGTGTGATATAGAGGAAAAAGATAGAGAGGCAGCAGAGAGAATGTTAAAGGTAGCTATCTGGTGTGTTCAGTATAGGTCGGAGTTGAGGCCCTTAATGAGTGTTGTGGTGAAAATGTTGGAAGGAGAATTTGAGATTCCTAGACCTTCAATTAATCCATTTCAGCACTTGATGCCAGACACTCCTATCATGGCAGCGGATTCCTCTCAAACAATAACTGGATATAACAATGTTTGTGAGACTTAA

Protein Analysis

413

Amino Acids

46.11

Weight (kDa)

6.28

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 107 - 370 1.8e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 108 - 303 3.9e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
Acc65I GGTACC 1 cut(s) 407
AccB1I GGYRCC 1 cut(s) 407
AciI CCGC 4 cut(s) 26, 69, 443, 1190
AclWI GGATC 1 cut(s) 215
AcoI YGGCCR 1 cut(s) 738
AcsI RAATTY 2 cut(s) 706, 1121
AfaI GTAC 3 cut(s) 409, 454, 857
AfeI AGCGCT 1 cut(s) 516
AfiI CCNNNNNNNGG 1 cut(s) 947
AgsI TTSAA 3 cut(s) 176, 965, 1143
AjiI CACGTC 1 cut(s) 194
AjnI CCWGG 2 cut(s) 682, 796
AjuI GAANNNNNNNTTGG 4 cut(s) 594, 626, 921, 953
AleI CACNNNNGTG 1 cut(s) 846
AluBI AGCT 8 cut(s) 213, 295, 595, 620, 745, 861, 968, 1049
AluI AGCT 8 cut(s) 213, 295, 595, 620, 745, 861, 968, 1049
Alw26I GTCTC 2 cut(s) 494, 1226
AlwI GGATC 1 cut(s) 215
Aor51HI AGCGCT 1 cut(s) 516
AoxI GGCC 2 cut(s) 738, 1082
ApeKI GCWGC 5 cut(s) 210, 655, 806, 1025, 1187
ApoI RAATTY 2 cut(s) 706, 1121
AseI ATTAAT 1 cut(s) 1146
Asp700I GAANNNNTTC 2 cut(s) 594, 710
Asp718I GGTACC 1 cut(s) 407
AspLEI GCGC 1 cut(s) 517
AspS9I GGNCC 1 cut(s) 1083
AsuHPI GGTGA 2 cut(s) 983, 1114
AsuII TTCGAA 1 cut(s) 588
BalI TGGCCA 1 cut(s) 740
BanI GGYRCC 1 cut(s) 407
BbvI GCAGC 5 cut(s) 222, 667, 793, 1037, 1199
BccI CCATC 2 cut(s) 281, 945
BceAI ACGGC 4 cut(s) 5, 17, 41, 47
BciT130I CCWGG 2 cut(s) 684, 798
BclI TGATCA 1 cut(s) 196
BcoDI GTCTC 2 cut(s) 494, 1226
BfaI CTAG 4 cut(s) 401, 621, 977, 1134
BfmI CTRYAG 1 cut(s) 290
BfoI RGCGCY 1 cut(s) 518
BglII AGATCT 1 cut(s) 576
BisI GCNGC 6 cut(s) 69, 211, 656, 807, 1026, 1188
BlsI GCNGC 6 cut(s) 70, 212, 657, 808, 1027, 1189
Bme1390I CCNGG 2 cut(s) 684, 798
BmgBI CACGTC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 1083
BmiI GGNNCC 2 cut(s) 409, 902
BmrFI CCNGG 2 cut(s) 684, 798
BmsI GCATC 1 cut(s) 1155
BplI GAGNNNNNCTC 2 cut(s) 778, 810
Bpu14I TTCGAA 1 cut(s) 588
BsaBI GATNNNNATC 1 cut(s) 164
BsaJI CCNNGG 4 cut(s) 411, 493, 565, 941
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 1 cut(s) 947
Bse1I ACTGG 2 cut(s) 938, 1216
Bse8I GATNNNNATC 1 cut(s) 164
BseBI CCWGG 2 cut(s) 684, 798
BseDI CCNNGG 4 cut(s) 411, 493, 565, 941
BseGI GGATG 2 cut(s) 706, 956
BseJI GATNNNNATC 1 cut(s) 164
BseLI CCNNNNNNNGG 1 cut(s) 947
BseNI ACTGG 2 cut(s) 938, 1216
BseXI GCAGC 5 cut(s) 222, 667, 793, 1037, 1199
BseYI CCCAGC 1 cut(s) 823
BsgI GTGCAG 2 cut(s) 135, 792
BshFI GGCC 2 cut(s) 740, 1084
BshNI GGYRCC 1 cut(s) 407
BslFI GGGAC 2 cut(s) 628, 770
BslI CCNNNNNNNGG 1 cut(s) 947
BsmAI GTCTC 2 cut(s) 494, 1226
BsmBI CGTCTC 1 cut(s) 494
BsmFI GGGAC 2 cut(s) 628, 770
BsmI GAATGC 2 cut(s) 653, 873
BsnI GGCC 2 cut(s) 740, 1084
Bsp119I TTCGAA 1 cut(s) 588
Bsp1407I TGTACA 1 cut(s) 855
Bsp143I GATC 3 cut(s) 196, 220, 576
Bsp19I CCATGG 2 cut(s) 493, 565
BspACI CCGC 4 cut(s) 26, 69, 443, 1190
BspANI GGCC 2 cut(s) 740, 1084
BspHI TCATGA 1 cut(s) 598
BspLI GGNNCC 2 cut(s) 409, 902
BspPI GGATC 1 cut(s) 215
BspT104I TTCGAA 1 cut(s) 588
BspT107I GGYRCC 1 cut(s) 407
BsrGI TGTACA 1 cut(s) 855
BsrI ACTGG 2 cut(s) 938, 1216
BssECI CCNNGG 4 cut(s) 411, 493, 565, 941
BssMI GATC 3 cut(s) 196, 220, 576
BssT1I CCWWGG 3 cut(s) 493, 565, 941
Bst2UI CCWGG 2 cut(s) 684, 798
Bst4CI ACNGT 1 cut(s) 172
BstAPI GCANNNNNTGC 2 cut(s) 122, 1165
BstAUI TGTACA 1 cut(s) 855
BstBI TTCGAA 1 cut(s) 588
BstC8I GCNNGC 1 cut(s) 653
BstDEI CTNAG 1 cut(s) 580
BstDSI CCRYGG 2 cut(s) 493, 565
BstF5I GGATG 2 cut(s) 706, 956
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 1 cut(s) 517
BstKTI GATC 3 cut(s) 199, 223, 579
BstMAI GTCTC 2 cut(s) 494, 1226
BstMBI GATC 3 cut(s) 196, 220, 576
BstMWI GCNNNNNNNGC 3 cut(s) 68, 122, 1165
BstNI CCWGG 2 cut(s) 684, 798
BstSCI CCNGG 2 cut(s) 682, 796
BstSFI CTRYAG 1 cut(s) 290
BstV1I GCAGC 5 cut(s) 222, 667, 793, 1037, 1199
BstX2I RGATCY 1 cut(s) 576
BstXI CCANNNNNNTGG 1 cut(s) 819
BstYI RGATCY 1 cut(s) 576
BsuRI GGCC 2 cut(s) 740, 1084
BtgI CCRYGG 2 cut(s) 493, 565
BtrI CACGTC 1 cut(s) 194
BtsCI GGATG 2 cut(s) 706, 956
BtsI GCAGTG 2 cut(s) 396, 999
BtsIMutI CAGTG 2 cut(s) 396, 999
Cac8I GCNNGC 1 cut(s) 653
CciI TCATGA 1 cut(s) 598
CfoI GCGC 1 cut(s) 517
Cfr13I GGNCC 1 cut(s) 1083
Csp6I GTAC 3 cut(s) 408, 453, 856
CviAII CATG 7 cut(s) 256, 439, 473, 494, 566, 599, 1183
CviQI GTAC 3 cut(s) 408, 453, 856
DdeI CTNAG 1 cut(s) 580
DpnI GATC 3 cut(s) 198, 222, 578
DpnII GATC 3 cut(s) 196, 220, 576
EaeI YGGCCR 1 cut(s) 738
EciI GGCGGA 1 cut(s) 458
Eco130I CCWWGG 3 cut(s) 493, 565, 941
Eco47III AGCGCT 1 cut(s) 516
EcoO109I RGGNCCY 1 cut(s) 1083
EcoRII CCWGG 2 cut(s) 682, 796
EcoT14I CCWWGG 3 cut(s) 493, 565, 941
ErhI CCWWGG 3 cut(s) 493, 565, 941
Esp3I CGTCTC 1 cut(s) 494
FaeI CATG 7 cut(s) 259, 442, 476, 497, 569, 602, 1186
FaqI GGGAC 2 cut(s) 628, 770
FatI CATG 7 cut(s) 255, 438, 472, 493, 565, 598, 1182
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 6 cut(s) 69, 211, 656, 807, 1026, 1188
FokI GGATG 2 cut(s) 713, 963
Fsp4HI GCNGC 6 cut(s) 69, 211, 656, 807, 1026, 1188
FspBI CTAG 4 cut(s) 401, 621, 977, 1134
GlaI GCGC 1 cut(s) 516
GluI GCNGC 6 cut(s) 69, 211, 656, 807, 1026, 1188
GsaI CCCAGC 1 cut(s) 827
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 2 cut(s) 740, 1084
HhaI GCGC 1 cut(s) 517
Hin1II CATG 7 cut(s) 259, 442, 476, 497, 569, 602, 1186
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 6 cut(s) 95, 187, 466, 585, 1129, 1193
HphI GGTGA 2 cut(s) 983, 1114
Hpy166II GTNNAC 5 cut(s) 282, 455, 667, 856, 974
Hpy188I TCNGA 7 cut(s) 156, 201, 217, 225, 300, 415, 1075
Hpy188III TCNNGA 4 cut(s) 6, 336, 599, 880
Hpy8I GTNNAC 5 cut(s) 282, 455, 667, 856, 974
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 4 cut(s) 388, 891, 1109, 1149
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4IV ACGT 1 cut(s) 193
HpyCH4V TGCA 6 cut(s) 116, 305, 608, 640, 750, 809
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 122, 1165
HpyF3I CTNAG 1 cut(s) 580
HpySE526I ACGT 1 cut(s) 193
Hsp92II CATG 7 cut(s) 259, 442, 476, 497, 569, 602, 1186
HspAI GCGC 1 cut(s) 515
KpnI GGTACC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 3 cut(s) 196, 220, 576
Lsp1109I GCAGC 5 cut(s) 222, 667, 793, 1037, 1199
LweI GCATC 1 cut(s) 1155
MaeI CTAG 4 cut(s) 401, 621, 977, 1134
MaeII ACGT 1 cut(s) 193
MaeIII GTNAC 2 cut(s) 83, 101
MalI GATC 3 cut(s) 198, 222, 578
MboI GATC 3 cut(s) 196, 220, 576
MboII GAAGA 4 cut(s) 656, 703, 906, 967
MflI RGATCY 1 cut(s) 576
MlsI TGGCCA 1 cut(s) 740
MluCI AATT 9 cut(s) 10, 241, 423, 434, 478, 603, 706, 1121, 1143
MluNI TGGCCA 1 cut(s) 740
MmeI TCCRAC 3 cut(s) 248, 1053, 1092
Mox20I TGGCCA 1 cut(s) 740
MroXI GAANNNNTTC 2 cut(s) 594, 710
MscI TGGCCA 1 cut(s) 740
MseI TTAA 5 cut(s) 912, 1040, 1088, 1146, 1237
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 740
MspA1I CMGCKG 1 cut(s) 1190
MspR9I CCNGG 2 cut(s) 684, 798
Mva1269I GAATGC 2 cut(s) 653, 873
MvaI CCWGG 2 cut(s) 684, 798
MwoI GCNNNNNNNGC 3 cut(s) 68, 122, 1165
NcoI CCATGG 2 cut(s) 493, 565
NdeII GATC 3 cut(s) 196, 220, 576
NlaIII CATG 7 cut(s) 259, 442, 476, 497, 569, 602, 1186
NlaIV GGNNCC 2 cut(s) 409, 902
NspV TTCGAA 1 cut(s) 588
OliI CACNNNNGTG 1 cut(s) 846
PagI TCATGA 1 cut(s) 598
PctI GAATGC 2 cut(s) 653, 873
PdmI GAANNNNTTC 2 cut(s) 594, 710
PfeI GAWTC 6 cut(s) 95, 187, 466, 585, 1129, 1193
PkrI GCNGC 6 cut(s) 70, 212, 657, 808, 1027, 1189
PshBI ATTAAT 1 cut(s) 1146
PsiI TTATAA 1 cut(s) 357
Psp6I CCWGG 2 cut(s) 682, 796
PspFI CCCAGC 1 cut(s) 823
PspGI CCWGG 2 cut(s) 682, 796
PspN4I GGNNCC 2 cut(s) 409, 902
PspPI GGNCC 1 cut(s) 1083
PsuI RGATCY 1 cut(s) 576
RsaI GTAC 3 cut(s) 409, 454, 857
RsaNI GTAC 3 cut(s) 408, 453, 856
RseI CAYNNNNRTG 1 cut(s) 846
SaqAI TTAA 5 cut(s) 912, 1040, 1088, 1146, 1237
SatI GCNGC 6 cut(s) 69, 211, 656, 807, 1026, 1188
Sau3AI GATC 3 cut(s) 196, 220, 576
Sau96I GGNCC 1 cut(s) 1083
ScrFI CCNGG 2 cut(s) 684, 798
SfaNI GCATC 1 cut(s) 1155
SfcI CTRYAG 1 cut(s) 290
SfuI TTCGAA 1 cut(s) 588
SmiMI CAYNNNNRTG 1 cut(s) 846
Sse9I AATT 9 cut(s) 10, 241, 423, 434, 478, 603, 706, 1121, 1143
SsiI CCGC 4 cut(s) 26, 69, 443, 1190
SspI AATATT 1 cut(s) 691
SspMI CTAG 4 cut(s) 401, 621, 977, 1134
StyD4I CCNGG 2 cut(s) 682, 796
StyI CCWWGG 3 cut(s) 493, 565, 941
TaaI ACNGT 1 cut(s) 172
TaiI ACGT 1 cut(s) 196
TaqI TCGA 5 cut(s) 5, 98, 190, 588, 879
TasI AATT 9 cut(s) 10, 241, 423, 434, 478, 603, 706, 1121, 1143
TatI WGTACW 2 cut(s) 452, 855
TauI GCSGC 1 cut(s) 71
TfiI GAWTC 6 cut(s) 95, 187, 466, 585, 1129, 1193
Tru1I TTAA 5 cut(s) 912, 1040, 1088, 1146, 1237
Tru9I TTAA 5 cut(s) 912, 1040, 1088, 1146, 1237
TscAI CASTG 2 cut(s) 396, 999
TseI GCWGC 5 cut(s) 210, 655, 806, 1025, 1187
TspDTI ATGAA 4 cut(s) 427, 458, 587, 615
TspRI CASTG 2 cut(s) 396, 999
VspI ATTAAT 1 cut(s) 1146
XapI RAATTY 2 cut(s) 706, 1121
XcmI CCANNNNNNNNNTGG 1 cut(s) 948
XmnI GAANNNNTTC 2 cut(s) 594, 710
XspI CTAG 4 cut(s) 401, 621, 977, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.