RLG00000009154
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
47638793 .. 47639872
1080 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009154

Sequence Viewer

Length: 1080 bp
ATGGACAATTTTCTAAATGATATGGAAAGAGAGAAGCCCATCAGGTTTACTTCTCAACAAATTCGGATTGCAACTGATAACTTCACCTACTTGTTGGGTTCAGGAGGGTTTGGTTCAGTTTATAAAGGTCTATTTAGTAATGGAACGCTTGTGGCAGTGAAGGTTCTAAGGGGTACCTCGGATCACAAGAGAATTGATGAGCAATTCATGGCGGAAGTTAGTACACTTGGCAGGATTCATCATGTCAACTTGGTTCGTCTCCATGGTTTCTGCTTTGAGAGAGAGCTTAGAGCACTGGTTTATGAGTATATGTCAAATGGTTCGCTTGACAAGTTTCTTTTCCATGGAAACAAGATCTTAGGATTCGAAAAGCTTCATGAAATTGCAGTTGGGACAGCTAGAGGGATTGCTTACTTGCACGAAGAATGCCAGCAGCGAATAGTCCACTACGATATAAAACCTGGAAATATTCTTTTGGATGTGAATTTCTTCCCTAAAGTTGCTGATTTCGGTTTGGCCAAGCTGTGCAACAGGGACAATACTCATATATCAATGACAGGTGGGAGGGGAACTCCTGGTTATGCTGCACCAGAACTTTGGCTGGGGCTTCCTATAACCCACAAATGTGATGTGTACAGCTTTGGAATGCTGTTATTCGAGATTATAGGTAGAAGAAGGAACCTTGACCTTAATCTTACAGAGAGCCAATACTGGTTTCCAAGGTGGGGATGGAAGAAGTTTGAAGCTGGTGAACTAGGAGAACTAATGGCAGTGTGTGATATAGAGGAAAAAGATAGAGAGGCAGCAGAGAGAATGTTAAAGGTAGCTATCTGGTGTGTTCAGTATAGGTCCGAGTTGAGGCCCTTAATGAGTGTTGTGGTGAAAATGTTGGAAGGAGAATTTGAGATTCCTAGACCTTCAATTAATCCATTTCAGCACTTGATGCCAGACAATCCTAACATGGCAGCATATAGCACTAGTGCCTTCGACACGGATTCCTCTCAAACAATAACTGGATATAACATTGTTTGTGAGACTCCCATCATGAAAAAATACGAGATTGAAATAGCGTCTACTTAA

Protein Analysis

360

Amino Acids

41.02

Weight (kDa)

6.15

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 31 - 296 1.7e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 31 - 230 7.2e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 123
Acc65I GGTACC 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 173
AccI GTMKAC 1 cut(s) 1073
AciI CCGC 1 cut(s) 212
AclWI GGATC 1 cut(s) 189
AcoI YGGCCR 1 cut(s) 516
AcsI RAATTY 3 cut(s) 60, 484, 899
AfaI GTAC 3 cut(s) 175, 223, 635
AfiI CCNNNNNNNGG 2 cut(s) 725, 858
AgsI TTSAA 3 cut(s) 743, 921, 1064
AhlI ACTAGT 1 cut(s) 977
AjnI CCWGG 2 cut(s) 460, 574
AjuI GAANNNNNNNTTGG 4 cut(s) 372, 404, 699, 731
AleI CACNNNNGTG 1 cut(s) 624
AluBI AGCT 7 cut(s) 286, 373, 398, 523, 639, 746, 827
AluI AGCT 7 cut(s) 286, 373, 398, 523, 639, 746, 827
Alw21I GWGCWC 1 cut(s) 295
Alw26I GTCTC 2 cut(s) 263, 1028
AlwI GGATC 1 cut(s) 189
AoxI GGCC 2 cut(s) 516, 860
ApeKI GCWGC 4 cut(s) 433, 584, 803, 965
ApoI RAATTY 3 cut(s) 60, 484, 899
AseI ATTAAT 1 cut(s) 924
Asp700I GAANNNNTTC 2 cut(s) 372, 488
Asp718I GGTACC 1 cut(s) 173
AspS9I GGNCC 2 cut(s) 849, 861
AsuHPI GGTGA 3 cut(s) 76, 761, 892
AsuII TTCGAA 1 cut(s) 366
AvaII GGWCC 1 cut(s) 849
BalI TGGCCA 1 cut(s) 518
BanI GGYRCC 1 cut(s) 173
Bbv12I GWGCWC 1 cut(s) 295
BbvI GCAGC 4 cut(s) 445, 571, 815, 977
BccI CCATC 3 cut(s) 47, 723, 1049
BciT130I CCWGG 2 cut(s) 462, 576
BcoDI GTCTC 2 cut(s) 263, 1028
BcuI ACTAGT 1 cut(s) 977
BfaI CTAG 4 cut(s) 399, 755, 912, 978
BglII AGATCT 1 cut(s) 354
BisI GCNGC 4 cut(s) 434, 585, 804, 966
BlsI GCNGC 4 cut(s) 435, 586, 805, 967
Bme1390I CCNGG 2 cut(s) 462, 576
Bme18I GGWCC 1 cut(s) 849
BmgT120I GGNCC 2 cut(s) 849, 861
BmiI GGNNCC 2 cut(s) 175, 680
BmrFI CCNGG 2 cut(s) 462, 576
BmsI GCATC 1 cut(s) 933
BplI GAGNNNNNCTC 2 cut(s) 556, 588
Bpu14I TTCGAA 1 cut(s) 366
BsaJI CCNNGG 4 cut(s) 177, 262, 343, 719
Bsc4I CCNNNNNNNGG 2 cut(s) 725, 858
Bse1I ACTGG 3 cut(s) 300, 716, 1018
BseBI CCWGG 2 cut(s) 462, 576
BseDI CCNNGG 4 cut(s) 177, 262, 343, 719
BseGI GGATG 2 cut(s) 484, 734
BseLI CCNNNNNNNGG 2 cut(s) 725, 858
BseNI ACTGG 3 cut(s) 300, 716, 1018
BseXI GCAGC 4 cut(s) 445, 571, 815, 977
BseYI CCCAGC 1 cut(s) 601
BsgI GTGCAG 1 cut(s) 570
BshFI GGCC 2 cut(s) 518, 862
BshNI GGYRCC 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 295
BslFI GGGAC 2 cut(s) 406, 548
BslI CCNNNNNNNGG 2 cut(s) 725, 858
BsmAI GTCTC 2 cut(s) 263, 1028
BsmBI CGTCTC 1 cut(s) 263
BsmFI GGGAC 2 cut(s) 406, 548
BsmI GAATGC 2 cut(s) 431, 651
BsnI GGCC 2 cut(s) 518, 862
Bsp119I TTCGAA 1 cut(s) 366
Bsp1286I GDGCHC 1 cut(s) 295
Bsp1407I TGTACA 1 cut(s) 633
Bsp143I GATC 2 cut(s) 181, 354
Bsp19I CCATGG 2 cut(s) 262, 343
BspACI CCGC 1 cut(s) 212
BspANI GGCC 2 cut(s) 518, 862
BspHI TCATGA 2 cut(s) 376, 1044
BspLI GGNNCC 2 cut(s) 175, 680
BspPI GGATC 1 cut(s) 189
BspT104I TTCGAA 1 cut(s) 366
BspT107I GGYRCC 1 cut(s) 173
BsrGI TGTACA 1 cut(s) 633
BsrI ACTGG 3 cut(s) 300, 716, 1018
BssECI CCNNGG 4 cut(s) 177, 262, 343, 719
BssMI GATC 2 cut(s) 181, 354
BssT1I CCWWGG 3 cut(s) 262, 343, 719
Bst2UI CCWGG 2 cut(s) 462, 576
BstAPI GCANNNNNTGC 1 cut(s) 943
BstAUI TGTACA 1 cut(s) 633
BstBI TTCGAA 1 cut(s) 366
BstC8I GCNNGC 1 cut(s) 431
BstDEI CTNAG 3 cut(s) 167, 287, 358
BstDSI CCRYGG 2 cut(s) 262, 343
BstF5I GGATG 2 cut(s) 484, 734
BstKTI GATC 2 cut(s) 184, 357
BstMAI GTCTC 2 cut(s) 263, 1028
BstMBI GATC 2 cut(s) 181, 354
BstMWI GCNNNNNNNGC 1 cut(s) 943
BstNI CCWGG 2 cut(s) 462, 576
BstSCI CCNGG 2 cut(s) 460, 574
BstV1I GCAGC 4 cut(s) 445, 571, 815, 977
BstX2I RGATCY 1 cut(s) 354
BstXI CCANNNNNNTGG 1 cut(s) 597
BstYI RGATCY 1 cut(s) 354
BsuRI GGCC 2 cut(s) 518, 862
BtgI CCRYGG 2 cut(s) 262, 343
BtsCI GGATG 2 cut(s) 484, 734
BtsI GCAGTG 2 cut(s) 162, 777
BtsIMutI CAGTG 3 cut(s) 162, 293, 777
Cac8I GCNNGC 1 cut(s) 431
CciI TCATGA 2 cut(s) 376, 1044
Cfr13I GGNCC 2 cut(s) 849, 861
CseI GACGC 1 cut(s) 1059
Csp6I GTAC 3 cut(s) 174, 222, 634
CviAII CATG 7 cut(s) 208, 242, 263, 344, 377, 961, 1045
CviQI GTAC 3 cut(s) 174, 222, 634
DdeI CTNAG 3 cut(s) 167, 287, 358
DpnI GATC 2 cut(s) 183, 356
DpnII GATC 2 cut(s) 181, 354
EaeI YGGCCR 1 cut(s) 516
EciI GGCGGA 1 cut(s) 227
Eco130I CCWWGG 3 cut(s) 262, 343, 719
Eco47I GGWCC 1 cut(s) 849
EcoO109I RGGNCCY 1 cut(s) 861
EcoRII CCWGG 2 cut(s) 460, 574
EcoT14I CCWWGG 3 cut(s) 262, 343, 719
ErhI CCWWGG 3 cut(s) 262, 343, 719
Esp3I CGTCTC 1 cut(s) 263
FaeI CATG 7 cut(s) 211, 245, 266, 347, 380, 964, 1048
FaqI GGGAC 2 cut(s) 406, 548
FatI CATG 7 cut(s) 207, 241, 262, 343, 376, 960, 1044
FblI GTMKAC 1 cut(s) 1073
Fnu4HI GCNGC 4 cut(s) 434, 585, 804, 966
FokI GGATG 2 cut(s) 491, 741
Fsp4HI GCNGC 4 cut(s) 434, 585, 804, 966
FspBI CTAG 4 cut(s) 399, 755, 912, 978
GluI GCNGC 4 cut(s) 434, 585, 804, 966
GsaI CCCAGC 1 cut(s) 605
HaeIII GGCC 2 cut(s) 518, 862
HgaI GACGC 1 cut(s) 1059
Hin1II CATG 7 cut(s) 211, 245, 266, 347, 380, 964, 1048
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 1 cut(s) 371
HinfI GANTC 5 cut(s) 235, 363, 907, 995, 1036
HphI GGTGA 3 cut(s) 76, 761, 892
Hpy166II GTNNAC 7 cut(s) 48, 224, 247, 445, 634, 752, 1074
Hpy188I TCNGA 3 cut(s) 66, 181, 853
Hpy188III TCNNGA 4 cut(s) 102, 377, 658, 1045
Hpy8I GTNNAC 7 cut(s) 48, 224, 247, 445, 634, 752, 1074
HpyAV CCTTC 5 cut(s) 154, 669, 887, 927, 994
HpyCH4V TGCA 5 cut(s) 71, 386, 418, 528, 587
HpyF10VI GCNNNNNNNGC 1 cut(s) 943
HpyF3I CTNAG 3 cut(s) 167, 287, 358
Hsp92II CATG 7 cut(s) 211, 245, 266, 347, 380, 964, 1048
KpnI GGTACC 1 cut(s) 177
Kzo9I GATC 2 cut(s) 181, 354
Lsp1109I GCAGC 4 cut(s) 445, 571, 815, 977
LweI GCATC 1 cut(s) 933
MaeI CTAG 4 cut(s) 399, 755, 912, 978
MalI GATC 2 cut(s) 183, 356
MboI GATC 2 cut(s) 181, 354
MboII GAAGA 4 cut(s) 434, 481, 684, 745
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 1 cut(s) 295
MlsI TGGCCA 1 cut(s) 518
MluCI AATT 8 cut(s) 7, 60, 192, 203, 381, 484, 899, 921
MluNI TGGCCA 1 cut(s) 518
MlyI GAGTC 1 cut(s) 1030
MmeI TCCRAC 1 cut(s) 870
MnlI CCTC 8 cut(s) 98, 187, 395, 558, 778, 793, 852, 1009
Mox20I TGGCCA 1 cut(s) 518
MroXI GAANNNNTTC 2 cut(s) 372, 488
MscI TGGCCA 1 cut(s) 518
MseI TTAA 5 cut(s) 690, 818, 866, 924, 1078
MslI CAYNNNNRTG 1 cut(s) 624
Msp20I TGGCCA 1 cut(s) 518
MspR9I CCNGG 2 cut(s) 462, 576
Mva1269I GAATGC 2 cut(s) 431, 651
MvaI CCWGG 2 cut(s) 462, 576
MwoI GCNNNNNNNGC 1 cut(s) 943
NcoI CCATGG 2 cut(s) 262, 343
NdeII GATC 2 cut(s) 181, 354
NlaIII CATG 7 cut(s) 211, 245, 266, 347, 380, 964, 1048
NlaIV GGNNCC 2 cut(s) 175, 680
NspV TTCGAA 1 cut(s) 366
OliI CACNNNNGTG 1 cut(s) 624
PagI TCATGA 2 cut(s) 376, 1044
PctI GAATGC 2 cut(s) 431, 651
PdmI GAANNNNTTC 2 cut(s) 372, 488
PfeI GAWTC 4 cut(s) 235, 363, 907, 995
PkrI GCNGC 4 cut(s) 435, 586, 805, 967
PleI GAGTC 1 cut(s) 1030
PpsI GAGTC 1 cut(s) 1030
PshBI ATTAAT 1 cut(s) 924
PsiI TTATAA 1 cut(s) 123
Psp6I CCWGG 2 cut(s) 460, 574
PspFI CCCAGC 1 cut(s) 601
PspGI CCWGG 2 cut(s) 460, 574
PspN4I GGNNCC 2 cut(s) 175, 680
PspPI GGNCC 2 cut(s) 849, 861
PsuI RGATCY 1 cut(s) 354
RsaI GTAC 3 cut(s) 175, 223, 635
RsaNI GTAC 3 cut(s) 174, 222, 634
RseI CAYNNNNRTG 1 cut(s) 624
SaqAI TTAA 5 cut(s) 690, 818, 866, 924, 1078
SatI GCNGC 4 cut(s) 434, 585, 804, 966
Sau3AI GATC 2 cut(s) 181, 354
Sau96I GGNCC 2 cut(s) 849, 861
SchI GAGTC 1 cut(s) 1030
ScrFI CCNGG 2 cut(s) 462, 576
SduI GDGCHC 1 cut(s) 295
SfaNI GCATC 1 cut(s) 933
SfuI TTCGAA 1 cut(s) 366
SinI GGWCC 1 cut(s) 849
SmiMI CAYNNNNRTG 1 cut(s) 624
SpeI ACTAGT 1 cut(s) 977
Sse9I AATT 8 cut(s) 7, 60, 192, 203, 381, 484, 899, 921
SsiI CCGC 1 cut(s) 212
SspI AATATT 1 cut(s) 469
SspMI CTAG 4 cut(s) 399, 755, 912, 978
StyD4I CCNGG 2 cut(s) 460, 574
StyI CCWWGG 3 cut(s) 262, 343, 719
TaqI TCGA 3 cut(s) 366, 657, 987
TasI AATT 8 cut(s) 7, 60, 192, 203, 381, 484, 899, 921
TatI WGTACW 2 cut(s) 221, 633
TfiI GAWTC 4 cut(s) 235, 363, 907, 995
Tru1I TTAA 5 cut(s) 690, 818, 866, 924, 1078
Tru9I TTAA 5 cut(s) 690, 818, 866, 924, 1078
TscAI CASTG 3 cut(s) 162, 300, 777
TseI GCWGC 4 cut(s) 433, 584, 803, 965
TspDTI ATGAA 5 cut(s) 196, 227, 365, 393, 1061
TspGWI ACGGA 1 cut(s) 1007
TspRI CASTG 3 cut(s) 162, 300, 777
VpaK11BI GGWCC 1 cut(s) 849
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 3 cut(s) 60, 484, 899
XcmI CCANNNNNNNNNTGG 1 cut(s) 726
XmiI GTMKAC 1 cut(s) 1073
XmnI GAANNNNTTC 2 cut(s) 372, 488
XspI CTAG 4 cut(s) 399, 755, 912, 978
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.