Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000690

Physical Location & Seq

Genomic Coordinates Forward (+)

4153074 .. 4172604

Gene Structure 19531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0029600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGACACGAGGAGGAGGAGGAGACGGGGAAGCCGTTGCGGCGGTGGCTGTGGTGGACCCTCAGGCGGTGGTGGCGGTGAAGAAGAAGTCGTCTCGGAGCTGGGTTTTGCTGGACGCGACGGGACAAGCGACGGTGTTGGATGTGGACAAGTACGCGATCATGCACAGAGTCCACATTCACGCTCGGGATCTCCGCATTGTCGACCCTCTGCTCTCTTACCCTTCCGCCATTCTCGGACGTGACAGGGCTATTGTTCTCAATCTGGAGCATATTAAAGCGATAATTACTGCTGAAGAGGTGCTGCTTCGGGATCCGTTGGATGAAAATGTTATTCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTAAATTCCAACCGTGAAAATCAAACAGATGGAAGAGAGTTCCCTGCTGGGCACAATGATGTTGATGCGGGTGAAGAAGATGAGTCTTCATTTGAATTCCGGGCCTTGGAGGTAGCCTTGGAAGCAATTTGTAGTTTTCTTGCTGCACGTACGACAGAACTGGAGACTGCTGCTTATCCGGCTCTAGATGAGCTTACCTCCAAGATTAGTAGCCGCAATTTGGATAGGGTTCGAAAATTGAAAAGTGCAATGACAAGGTTGACTGCACGGGTCCAAAAGGTGAGGGATGAGATCGAGCAGCTGCTGGATGATGATGATGATATGGCCGACCTTTACTTGTCAAGAAAGTTGGCGGGTGCATGTTCACCAGTTAGTGCCTCTGGTCCTCCCAATTGGTATCCTGCCTCCCCTACCATAGGCTCAATATCACGGGCAAGTAGAGCAAGTATGGTAACTGTTCGTGGAAATGAGAATGACGTTGACGAACTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGCACCTTGAACAAGTTAGCTACGCTGCGTGAATATATTGATGATACGGAGGATTACATAAATATTCAGCTCGATAACCACAGGAATCAGTTAATTCAGCTTGAGCTTATTCTTAGTTCTGGAACTGTTAGTTTATCCATGTATTCTTTGGTGTGTGGAATTTTTGGCGTGAATATCCCATATTCGTGGAACGAGGATCATGGATACATGTTTAAATGGGTTTGCATTGTTACAGGAATAGTATGTTTCTCTGTTTTCATAGTAATTGTAGCATATGCTCGCCACAAAGGTTTGGTCGGATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

399

Amino Acids

44.15

Weight (kDa)

4.88

Isoelectric Point (pI)

39.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MRS2-like	PF22099	37 - 240	1.3e-26	Magnesium transporter MRS2-like
MRS2-like	PF22099	279 - 326	6.4e-08	Magnesium transporter MRS2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g07910
malus_domestica	MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica	Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis	pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis	RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata	RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora	Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa	Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha	Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana	Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	896
AccI	GTMKAC	1 cut(s)	201
AccII	CGCG	2 cut(s)	116, 155
AciI	CCGC	9 cut(s)	38, 41, 65, 74, 193, 225, 437, 583, 722
AclWI	GGATC	4 cut(s)	195, 305, 318, 1098
AcoI	YGGCCR	1 cut(s)	693
AcsI	RAATTY	3 cut(s)	373, 464, 1053
AcuI	CTGAAG	1 cut(s)	312
AfaI	GTAC	2 cut(s)	152, 520
AfiI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
AflIII	ACRYGT	1 cut(s)	1101
AgsI	TTSAA	6 cut(s)	344, 353, 464, 610, 860, 904
AjiI	CACGTC	1 cut(s)	239
AluBI	AGCT	8 cut(s)	99, 349, 562, 670, 914, 964, 994, 1000
AluI	AGCT	8 cut(s)	99, 349, 562, 670, 914, 964, 994, 1000
Alw26I	GTCTC	3 cut(s)	15, 96, 527
AlwI	GGATC	4 cut(s)	195, 305, 318, 1098
AlwNI	CAGNNNCTG	1 cut(s)	673
Ama87I	CYCGRG	1 cut(s)	183
AoxI	GGCC	2 cut(s)	471, 693
ApeKI	GCWGC	6 cut(s)	301, 512, 539, 667, 670, 919
ApoI	RAATTY	3 cut(s)	373, 464, 1053
ArsI	GACNNNNNNTTYG	1 cut(s)	1173
Asp700I	GAANNNNTTC	1 cut(s)	348
AspS9I	GGNCC	4 cut(s)	55, 471, 640, 752
AsuC2I	CCSGG	1 cut(s)	470
AsuHPI	GGTGA	4 cut(s)	88, 452, 661, 726
AsuII	TTCGAA	1 cut(s)	601
AvaI	CYCGRG	1 cut(s)	183
AvaII	GGWCC	3 cut(s)	55, 640, 752
AxyI	CCTNAGG	1 cut(s)	60
BaeGI	GKGCMC	1 cut(s)	423
BamHI	GGATCC	1 cut(s)	310
BanI	GGYRCC	1 cut(s)	896
BauI	CACGAG	1 cut(s)	6
BbsI	GAAGAC	1 cut(s)	447
BbvI	GCAGC	6 cut(s)	288, 499, 526, 657, 679, 906
BccI	CCATC	2 cut(s)	392, 887
BceAI	ACGGC	1 cut(s)	17
BciVI	GTATCC	2 cut(s)	777, 1091
BcnI	CCSGG	1 cut(s)	470
BcoDI	GTCTC	3 cut(s)	15, 96, 527
BfaI	CTAG	1 cut(s)	554
BfuI	GTATCC	2 cut(s)	777, 1091
BglI	GCCNNNNNGGC	1 cut(s)	38
BisI	GCNGC	8 cut(s)	39, 302, 513, 540, 583, 668, 671, 920
BlsI	GCNGC	8 cut(s)	40, 303, 514, 541, 584, 669, 672, 921
Bme1390I	CCNGG	1 cut(s)	470
Bme18I	GGWCC	3 cut(s)	55, 640, 752
BmeT110I	CYCGRG	1 cut(s)	183
BmgBI	CACGTC	1 cut(s)	239
BmgT120I	GGNCC	4 cut(s)	55, 471, 640, 752
BmiI	GGNNCC	4 cut(s)	57, 312, 641, 898
BmrFI	CCNGG	1 cut(s)	470
BmsI	GCATC	1 cut(s)	424
BpiI	GAAGAC	1 cut(s)	447
BplI	GAGNNNNNCTC	2 cut(s)	551, 583
BpmI	CTGGAG	3 cut(s)	284, 551, 890
Bpu14I	TTCGAA	1 cut(s)	601
BpuEI	CTTGAG	1 cut(s)	1016
BpuMI	CCSGG	1 cut(s)	470
BsaAI	YACGTR	1 cut(s)	518
BsaJI	CCNNGG	2 cut(s)	474, 486
Bsc4I	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
Bse1I	ACTGG	3 cut(s)	534, 737, 873
Bse21I	CCTNAGG	1 cut(s)	60
Bse3DI	GCAATG	1 cut(s)	624
BseDI	CCNNGG	2 cut(s)	474, 486
BseGI	GGATG	4 cut(s)	145, 325, 661, 682
BseLI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
BseMI	GCAATG	1 cut(s)	624
BseMII	CTCAG	1 cut(s)	74
BseNI	ACTGG	3 cut(s)	534, 737, 873
BseRI	GAGGAG	4 cut(s)	24, 27, 30, 33
BseSI	GKGCMC	1 cut(s)	423
BseXI	GCAGC	6 cut(s)	288, 499, 526, 657, 679, 906
BseYI	CCCAGC	2 cut(s)	99, 416
BsgI	GTGCAG	2 cut(s)	498, 618
Bsh1236I	CGCG	2 cut(s)	116, 155
BshFI	GGCC	2 cut(s)	473, 695
BshNI	GGYRCC	1 cut(s)	896
BsiHKCI	CYCGRG	1 cut(s)	183
BsiSI	CCGG	2 cut(s)	469, 548
BsiWI	CGTACG	1 cut(s)	518
BslFI	GGGAC	1 cut(s)	135
BslI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
BsmAI	GTCTC	3 cut(s)	15, 96, 527
BsmBI	CGTCTC	2 cut(s)	15, 96
BsmFI	GGGAC	1 cut(s)	135
BsnI	GGCC	2 cut(s)	473, 695
BsoBI	CYCGRG	1 cut(s)	183
Bsp119I	TTCGAA	1 cut(s)	601
Bsp1286I	GDGCHC	1 cut(s)	423
Bsp143I	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
BspACI	CCGC	9 cut(s)	38, 41, 65, 74, 193, 225, 437, 583, 722
BspANI	GGCC	2 cut(s)	473, 695
BspCNI	CTCAG	1 cut(s)	73
BspFNI	CGCG	2 cut(s)	116, 155
BspLI	GGNNCC	4 cut(s)	57, 312, 641, 898
BspPI	GGATC	4 cut(s)	195, 305, 318, 1098
BspQI	GCTCTTC	1 cut(s)	339
BspT104I	TTCGAA	1 cut(s)	601
BspT107I	GGYRCC	1 cut(s)	896
BsrDI	GCAATG	1 cut(s)	624
BsrI	ACTGG	3 cut(s)	534, 737, 873
BssECI	CCNNGG	2 cut(s)	474, 486
BssMI	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
BssSI	CACGAG	1 cut(s)	6
BssT1I	CCWWGG	2 cut(s)	474, 486
Bst2BI	CACGAG	1 cut(s)	6
Bst4CI	ACNGT	5 cut(s)	133, 360, 383, 826, 1021
Bst6I	CTCTTC	3 cut(s)	288, 339, 397
BstBAI	YACGTR	1 cut(s)	518
BstBI	TTCGAA	1 cut(s)	601
BstC8I	GCNNGC	1 cut(s)	1174
BstDEI	CTNAG	2 cut(s)	60, 1007
BstENI	CCTNNNNNAGG	1 cut(s)	783
BstF5I	GGATG	4 cut(s)	145, 325, 661, 682
BstFNI	CGCG	2 cut(s)	116, 155
BstKTI	GATC	6 cut(s)	159, 190, 313, 663, 1093, 1196
BstMAI	GTCTC	3 cut(s)	15, 96, 527
BstMBI	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 44, 71, 491, 548, 809
BstNSI	RCATGY	2 cut(s)	732, 1105
BstSCI	CCNGG	1 cut(s)	468
BstSLI	GKGCMC	1 cut(s)	423
BstUI	CGCG	2 cut(s)	116, 155
BstV1I	GCAGC	6 cut(s)	288, 499, 526, 657, 679, 906
BstV2I	GAAGAC	1 cut(s)	447
BstX2I	RGATCY	2 cut(s)	187, 310
BstXI	CCANNNNNNTGG	1 cut(s)	1080
BstYI	RGATCY	2 cut(s)	187, 310
Bsu36I	CCTNAGG	1 cut(s)	60
BsuI	GTATCC	2 cut(s)	777, 1091
BsuRI	GGCC	2 cut(s)	473, 695
BtrI	CACGTC	1 cut(s)	239
BtsCI	GGATG	4 cut(s)	145, 325, 661, 682
Cac8I	GCNNGC	1 cut(s)	1174
CaiI	CAGNNNCTG	1 cut(s)	673
Cfr13I	GGNCC	4 cut(s)	55, 471, 640, 752
CseI	GACGC	1 cut(s)	122
Csp6I	GTAC	2 cut(s)	151, 519
CviAII	CATG	5 cut(s)	160, 729, 1033, 1094, 1102
CviQI	GTAC	2 cut(s)	151, 519
DdeI	CTNAG	2 cut(s)	60, 1007
DpnI	GATC	6 cut(s)	158, 189, 312, 662, 1092, 1195
DpnII	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
DraI	TTTAAA	1 cut(s)	1108
EaeI	YGGCCR	1 cut(s)	693
Eam1104I	CTCTTC	3 cut(s)	288, 339, 397
EarI	CTCTTC	3 cut(s)	288, 339, 397
EciI	GGCGGA	1 cut(s)	214
Eco130I	CCWWGG	2 cut(s)	474, 486
Eco47I	GGWCC	3 cut(s)	55, 640, 752
Eco57I	CTGAAG	1 cut(s)	312
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	1 cut(s)	183
EcoNI	CCTNNNNNAGG	1 cut(s)	783
EcoRI	GAATTC	1 cut(s)	464
EcoT14I	CCWWGG	2 cut(s)	474, 486
ErhI	CCWWGG	2 cut(s)	474, 486
Esp3I	CGTCTC	2 cut(s)	15, 96
FaeI	CATG	5 cut(s)	163, 732, 1036, 1097, 1105
FaqI	GGGAC	1 cut(s)	135
FatI	CATG	5 cut(s)	159, 728, 1032, 1093, 1101
FauI	CCCGC	2 cut(s)	430, 715
FauNDI	CATATG	1 cut(s)	1168
FblI	GTMKAC	1 cut(s)	201
Fnu4HI	GCNGC	8 cut(s)	39, 302, 513, 540, 583, 668, 671, 920
FokI	GGATG	4 cut(s)	152, 332, 668, 689
Fsp4HI	GCNGC	8 cut(s)	39, 302, 513, 540, 583, 668, 671, 920
FspBI	CTAG	1 cut(s)	554
GluI	GCNGC	8 cut(s)	39, 302, 513, 540, 583, 668, 671, 920
GsaI	CCCAGC	2 cut(s)	103, 420
GsuI	CTGGAG	3 cut(s)	284, 551, 890
HaeIII	GGCC	2 cut(s)	473, 695
HapII	CCGG	2 cut(s)	469, 548
HgaI	GACGC	1 cut(s)	122
Hin1II	CATG	5 cut(s)	163, 732, 1036, 1097, 1105
HincII	GTYRAC	3 cut(s)	202, 630, 850
HindII	GTYRAC	3 cut(s)	202, 630, 850
HinfI	GANTC	3 cut(s)	168, 452, 979
HpaII	CCGG	2 cut(s)	469, 548
HphI	GGTGA	4 cut(s)	88, 452, 661, 726
Hpy166II	GTNNAC	7 cut(s)	55, 145, 172, 202, 630, 734, 850
Hpy188I	TCNGA	3 cut(s)	96, 236, 1193
Hpy188III	TCNNGA	7 cut(s)	185, 263, 308, 554, 711, 1014, 1197
Hpy8I	GTNNAC	7 cut(s)	55, 145, 172, 202, 630, 734, 850
Hpy99I	CGWCG	2 cut(s)	121, 133
HpyAV	CCTTC	1 cut(s)	231
HpyCH4III	ACNGT	5 cut(s)	133, 360, 383, 826, 1021
HpyCH4IV	ACGT	3 cut(s)	238, 517, 846
HpyCH4V	TGCA	7 cut(s)	163, 515, 617, 635, 728, 886, 1119
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 44, 71, 491, 548, 809
HpyF3I	CTNAG	2 cut(s)	60, 1007
HpySE526I	ACGT	3 cut(s)	238, 517, 846
Hsp92II	CATG	5 cut(s)	163, 732, 1036, 1097, 1105
Kzo9I	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	2 cut(s)	96, 265
Lsp1109I	GCAGC	6 cut(s)	288, 499, 526, 657, 679, 906
LweI	GCATC	1 cut(s)	424
MaeI	CTAG	1 cut(s)	554
MaeII	ACGT	3 cut(s)	238, 517, 846
MaeIII	GTNAC	4 cut(s)	239, 820, 864, 1123
MalI	GATC	6 cut(s)	158, 189, 312, 662, 1092, 1195
MboI	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
MboII	GAAGA	8 cut(s)	91, 94, 305, 356, 414, 447, 455, 458
MfeI	CAATTG	1 cut(s)	760
MflI	RGATCY	2 cut(s)	187, 310
MhlI	GDGCHC	1 cut(s)	423
MlyI	GAGTC	2 cut(s)	177, 461
MmeI	TCCRAC	4 cut(s)	117, 297, 402, 1171
MroXI	GAANNNNTTC	1 cut(s)	348
MseI	TTAA	3 cut(s)	273, 986, 1107
MslI	CAYNNNNRTG	2 cut(s)	426, 1078
MspA1I	CMGCKG	1 cut(s)	670
MspI	CCGG	2 cut(s)	469, 548
MspR9I	CCNGG	1 cut(s)	470
MunI	CAATTG	1 cut(s)	760
MvnI	CGCG	2 cut(s)	116, 155
MwoI	GCNNNNNNNGC	6 cut(s)	38, 44, 71, 491, 548, 809
NciI	CCSGG	1 cut(s)	470
NdeI	CATATG	1 cut(s)	1168
NdeII	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
NlaIII	CATG	5 cut(s)	163, 732, 1036, 1097, 1105
NlaIV	GGNNCC	4 cut(s)	57, 312, 641, 898
NmuCI	GTSAC	1 cut(s)	239
NspI	RCATGY	2 cut(s)	732, 1105
NspV	TTCGAA	1 cut(s)	601
PciI	ACATGT	1 cut(s)	1101
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	2 cut(s)	30, 125
PdmI	GAANNNNTTC	1 cut(s)	348
PfeI	GAWTC	1 cut(s)	979
Pfl23II	CGTACG	1 cut(s)	518
PkrI	GCNGC	8 cut(s)	40, 303, 514, 541, 584, 669, 672, 921
PleI	GAGTC	2 cut(s)	176, 460
PpsI	GAGTC	2 cut(s)	176, 460
Ppu21I	YACGTR	1 cut(s)	518
PscI	ACATGT	1 cut(s)	1101
PspFI	CCCAGC	2 cut(s)	99, 416
PspLI	CGTACG	1 cut(s)	518
PspN4I	GGNNCC	4 cut(s)	57, 312, 641, 898
PspPI	GGNCC	4 cut(s)	55, 471, 640, 752
PstNI	CAGNNNCTG	1 cut(s)	673
PsuI	RGATCY	2 cut(s)	187, 310
PvuII	CAGCTG	1 cut(s)	670
RsaI	GTAC	2 cut(s)	152, 520
RsaNI	GTAC	2 cut(s)	151, 519
RseI	CAYNNNNRTG	2 cut(s)	426, 1078
SalI	GTCGAC	1 cut(s)	200
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	3 cut(s)	273, 986, 1107
SatI	GCNGC	8 cut(s)	39, 302, 513, 540, 583, 668, 671, 920
Sau3AI	GATC	6 cut(s)	156, 187, 310, 660, 1090, 1193
Sau96I	GGNCC	4 cut(s)	55, 471, 640, 752
SchI	GAGTC	2 cut(s)	177, 461
ScrFI	CCNGG	1 cut(s)	470
SduI	GDGCHC	1 cut(s)	423
SfaNI	GCATC	1 cut(s)	424
SfuI	TTCGAA	1 cut(s)	601
SinI	GGWCC	3 cut(s)	55, 640, 752
SmiMI	CAYNNNNRTG	2 cut(s)	426, 1078
SmlI	CTYRAG	1 cut(s)	995
SmoI	CTYRAG	1 cut(s)	995
SsiI	CCGC	9 cut(s)	38, 41, 65, 74, 193, 225, 437, 583, 722
SspI	AATATT	1 cut(s)	958
SspMI	CTAG	1 cut(s)	554
StyD4I	CCNGG	1 cut(s)	468
StyI	CCWWGG	2 cut(s)	474, 486
TaaI	ACNGT	5 cut(s)	133, 360, 383, 826, 1021
TaiI	ACGT	3 cut(s)	241, 520, 849
TaqI	TCGA	4 cut(s)	201, 601, 663, 966
TauI	GCSGC	2 cut(s)	41, 585
TfiI	GAWTC	1 cut(s)	979
Tru1I	TTAA	3 cut(s)	273, 986, 1107
Tru9I	TTAA	3 cut(s)	273, 986, 1107
TseFI	GTSAC	1 cut(s)	239
TseI	GCWGC	6 cut(s)	301, 512, 539, 667, 670, 919
Tsp45I	GTSAC	1 cut(s)	239
TspDTI	ATGAA	3 cut(s)	336, 447, 1141
TspGWI	ACGGA	2 cut(s)	303, 956
VpaK11BI	GGWCC	3 cut(s)	55, 640, 752
XagI	CCTNNNNNAGG	1 cut(s)	783
XapI	RAATTY	3 cut(s)	373, 464, 1053
XbaI	TCTAGA	1 cut(s)	553
XceI	RCATGY	2 cut(s)	732, 1105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1039
XmiI	GTMKAC	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	348
XspI	CTAG	1 cut(s)	554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.