pycom16g18430
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
15042450 .. 15043721
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g18430.1

Sequence Viewer

Length: 1272 bp
ATGGTCTTAGTGAATATTGTTGCCTTGATTGCAGTGTGCAAGATTCGTCGGAAACGCGCAAGAGAGAGAAGTCAGAAAGTGCGCTTAGTGCAGATCGTTTCCCCGGACGATCGGACGCTCACAACGGAGAAGATCGTTACTCCAGACTTTCGGGCACTCACAATGGACAACTTTATAAATGATATGGAAAGAGAAAAGCCCGTTAGGTTCACTTCTCAACAACTTCGGATTGCGACTGATAACTTCACCAATTTGTTAGGCCGAGGAGGTTTTGGTGCAGTTTATAAAGGAATATTTAGCAATGGAACCCCAGCGGCAGTGAAGGTTCTACATGGAAGTTCGGATAAGCGTATCAATGAACAATTTATGGCGGAAGTTGGTACAATCGGAAGAATACATCACATCAATCTGGTCCGTCTTTATGGTTTCTGCTTTGAGGAACACCTCAGAGCAATTGTTTACGAGTACATGGGAAATGGATCGCTTGACAAGTACTTATTTGGTAGCAACAAAGTGGTCTTAGGATTTGAACAACTTCATGAGATTGCTGTGGGGACAGCAAGAGGGATCGCTTACTTGCATGAAGAATGCCAACAACGGATTGTCCATTACGACATAAAGCCTGAAAATATTCTTTTGGATGCAAAGTTCTTTCCAAAAGTAGCTGATTTCGGTTTGGCCAAGCTGTGTAACAGGGACAACACTCATATAACCATGACAGGAGGGAGGGGGACTCTGGGTTATGCTGCGCCAGAAGTTTGCCAGCGGTTCTCAGTAACACACAAATGTGATGTGTACAGCTTTGGAATGCTATTGTTTAATATTATAGGCAGGAGAAGGAATCTTGATATCAAAGTCGAAGATAGCCGAGACTGGTTCCCGACGTGGGTATGGAAGAAGTTTGAACCCGGAGAATTAGGAGAGCTGATGGTAGTTTGTGGAATAGAGGAGAAAGATAAAGAGAAGGCAGAGAGAATGGTAAATGTAGCTTTGTGGTGTGTCCAGTATAAGCAAGAGGATAGGCCTTCAATGAGTGATGTGGTGAAAATGTTGGAAGGAGCAATGGAGATTCCTAGACCTTCAACTAACCCTTTTCAGCACTTGATGTCGGACACTCCATACCCTGCTGCACCCGTCTATGATACGTCAAATCCAACAACTGGTACCAGCAGCGATTTCTGTTCAGTTCCTTCTCAAACTGTAAATGGATATAGAGCCGTACATGATACTCCTATCATGAAGAAATATGAGATTGAAATAGCGTCTAACTAG

Protein Analysis

424

Amino Acids

48.01

Weight (kDa)

8.27

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 82 - 351 5.3e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 84 - 349 4.7e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 176, 285
Acc65I GGTACC 1 cut(s) 1163
AccB1I GGYRCC 1 cut(s) 1163
AccB7I CCANNNNNTGG 1 cut(s) 1160
AccII CGCG 1 cut(s) 57
AciI CCGC 3 cut(s) 314, 371, 766
AclWI GGATC 2 cut(s) 487, 575
AcoI YGGCCR 1 cut(s) 678
AfaI GTAC 6 cut(s) 382, 467, 494, 797, 1165, 1221
AfiI CCNNNNNNNGG 2 cut(s) 886, 1160
AgsI TTSAA 5 cut(s) 530, 905, 1029, 1083, 1256
AjiI CACGTC 1 cut(s) 885
AleI CACNNNNGTG 1 cut(s) 786
AloI GAACNNNNNNTCC 2 cut(s) 632, 664
AluBI AGCT 5 cut(s) 665, 685, 801, 925, 989
AluI AGCT 5 cut(s) 665, 685, 801, 925, 989
Alw26I GTCTC 1 cut(s) 864
AlwI GGATC 2 cut(s) 487, 575
AoxI GGCC 3 cut(s) 259, 678, 1022
ApeKI GCWGC 3 cut(s) 746, 1127, 1170
Asp700I GAANNNNTTC 2 cut(s) 534, 630
Asp718I GGTACC 1 cut(s) 1163
AspLEI GCGC 3 cut(s) 59, 84, 751
AspS9I GGNCC 1 cut(s) 412
AsuC2I CCSGG 2 cut(s) 104, 909
AsuHPI GGTGA 2 cut(s) 238, 1054
AvaII GGWCC 1 cut(s) 412
BaeGI GKGCMC 1 cut(s) 157
BalI TGGCCA 1 cut(s) 680
BanI GGYRCC 1 cut(s) 1163
BbvI GCAGC 3 cut(s) 733, 1114, 1182
BccI CCATC 1 cut(s) 922
BceAI ACGGC 1 cut(s) 1202
BcnI CCSGG 2 cut(s) 104, 909
BcoDI GTCTC 1 cut(s) 864
BfaI CTAG 2 cut(s) 1074, 1270
BisI GCNGC 4 cut(s) 315, 747, 1128, 1171
BlsI GCNGC 4 cut(s) 316, 748, 1129, 1172
BmcAI AGTACT 1 cut(s) 494
Bme1390I CCNGG 2 cut(s) 104, 909
Bme18I GGWCC 1 cut(s) 412
BmgBI CACGTC 1 cut(s) 885
BmgT120I GGNCC 1 cut(s) 412
BmiI GGNNCC 3 cut(s) 307, 878, 1165
BmrFI CCNGG 2 cut(s) 104, 909
BmsI GCATC 1 cut(s) 631
BplI GAGNNNNNCTC 2 cut(s) 718, 750
BpmI CTGGAG 1 cut(s) 126
BpuMI CCSGG 2 cut(s) 104, 909
BsaJI CCNNGG 2 cut(s) 102, 262
Bsc4I CCNNNNNNNGG 2 cut(s) 886, 1160
Bse1I ACTGG 3 cut(s) 878, 1003, 1165
Bse3DI GCAATG 2 cut(s) 307, 1068
BseDI CCNNGG 2 cut(s) 102, 262
BseGI GGATG 1 cut(s) 646
BseLI CCNNNNNNNGG 2 cut(s) 886, 1160
BseMI GCAATG 2 cut(s) 307, 1068
BseMII CTCAG 2 cut(s) 460, 786
BseNI ACTGG 3 cut(s) 878, 1003, 1165
BseRI GAGGAG 2 cut(s) 279, 962
BseSI GKGCMC 1 cut(s) 157
BseXI GCAGC 3 cut(s) 733, 1114, 1182
BseYI CCCAGC 1 cut(s) 310
BsgI GTGCAG 3 cut(s) 110, 297, 1113
Bsh1236I CGCG 1 cut(s) 57
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 3 cut(s) 261, 680, 1024
BshNI GGYRCC 1 cut(s) 1163
BsiEI CGRYCG 1 cut(s) 112
BsiSI CCGG 2 cut(s) 104, 909
BslFI GGGAC 3 cut(s) 568, 710, 745
BslI CCNNNNNNNGG 2 cut(s) 886, 1160
BsmAI GTCTC 1 cut(s) 864
BsmFI GGGAC 3 cut(s) 568, 710, 745
BsmI GAATGC 2 cut(s) 593, 813
BsnI GGCC 3 cut(s) 261, 680, 1024
Bsp1286I GDGCHC 1 cut(s) 157
Bsp1407I TGTACA 1 cut(s) 795
Bsp143I GATC 5 cut(s) 93, 109, 132, 479, 567
BspACI CCGC 3 cut(s) 314, 371, 766
BspANI GGCC 3 cut(s) 261, 680, 1024
BspCNI CTCAG 2 cut(s) 459, 785
BspFNI CGCG 1 cut(s) 57
BspHI TCATGA 2 cut(s) 538, 1236
BspLI GGNNCC 3 cut(s) 307, 878, 1165
BspPI GGATC 2 cut(s) 487, 575
BspT107I GGYRCC 1 cut(s) 1163
BsrDI GCAATG 2 cut(s) 307, 1068
BsrGI TGTACA 1 cut(s) 795
BsrI ACTGG 3 cut(s) 878, 1003, 1165
BssECI CCNNGG 2 cut(s) 102, 262
BssMI GATC 5 cut(s) 93, 109, 132, 479, 567
Bst4CI ACNGT 1 cut(s) 1201
BstAUI TGTACA 1 cut(s) 795
BstC8I GCNNGC 1 cut(s) 764
BstDEI CTNAG 5 cut(s) 7, 85, 446, 520, 772
BstF5I GGATG 1 cut(s) 646
BstFNI CGCG 1 cut(s) 57
BstHHI GCGC 3 cut(s) 59, 84, 751
BstKTI GATC 5 cut(s) 96, 112, 135, 482, 570
BstMAI GTCTC 1 cut(s) 864
BstMBI GATC 5 cut(s) 93, 109, 132, 479, 567
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 2 cut(s) 29, 88
BstSCI CCNGG 2 cut(s) 102, 907
BstSLI GKGCMC 1 cut(s) 157
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 3 cut(s) 733, 1114, 1182
BsuRI GGCC 3 cut(s) 261, 680, 1024
BtrI CACGTC 1 cut(s) 885
BtsCI GGATG 1 cut(s) 646
BtsI GCAGTG 2 cut(s) 39, 324
BtsIMutI CAGTG 2 cut(s) 39, 324
Cac8I GCNNGC 1 cut(s) 764
CciI TCATGA 2 cut(s) 538, 1236
CfoI GCGC 3 cut(s) 59, 84, 751
Cfr13I GGNCC 1 cut(s) 412
CseI GACGC 2 cut(s) 124, 1251
Csp6I GTAC 6 cut(s) 381, 466, 493, 796, 1164, 1220
CviAII CATG 7 cut(s) 332, 469, 539, 581, 715, 1223, 1237
CviQI GTAC 6 cut(s) 381, 466, 493, 796, 1164, 1220
DdeI CTNAG 5 cut(s) 7, 85, 446, 520, 772
DpnI GATC 5 cut(s) 95, 111, 134, 481, 569
DpnII GATC 5 cut(s) 93, 109, 132, 479, 567
EaeI YGGCCR 1 cut(s) 678
EciI GGCGGA 1 cut(s) 386
Eco147I AGGCCT 1 cut(s) 1024
Eco32I GATATC 1 cut(s) 850
Eco47I GGWCC 1 cut(s) 412
EcoRV GATATC 1 cut(s) 850
FaeI CATG 7 cut(s) 335, 472, 542, 584, 718, 1226, 1240
FaqI GGGAC 3 cut(s) 568, 710, 745
FatI CATG 7 cut(s) 331, 468, 538, 580, 714, 1222, 1236
Fnu4HI GCNGC 4 cut(s) 315, 747, 1128, 1171
FokI GGATG 1 cut(s) 653
Fsp4HI GCNGC 4 cut(s) 315, 747, 1128, 1171
FspBI CTAG 2 cut(s) 1074, 1270
GlaI GCGC 3 cut(s) 58, 83, 750
GluI GCNGC 4 cut(s) 315, 747, 1128, 1171
GsaI CCCAGC 1 cut(s) 314
GsuI CTGGAG 1 cut(s) 126
HaeIII GGCC 3 cut(s) 261, 680, 1024
HapII CCGG 2 cut(s) 104, 909
HgaI GACGC 2 cut(s) 124, 1251
HhaI GCGC 3 cut(s) 59, 84, 751
Hin1II CATG 7 cut(s) 335, 472, 542, 584, 718, 1226, 1240
Hin6I GCGC 3 cut(s) 57, 82, 749
HinP1I GCGC 3 cut(s) 57, 82, 749
HinfI GANTC 4 cut(s) 43, 733, 841, 1069
HpaII CCGG 2 cut(s) 104, 909
HphI GGTGA 2 cut(s) 238, 1054
Hpy166II GTNNAC 3 cut(s) 210, 460, 796
Hpy188I TCNGA 8 cut(s) 51, 75, 114, 228, 343, 389, 449, 1111
Hpy188III TCNNGA 5 cut(s) 143, 539, 845, 880, 1237
Hpy8I GTNNAC 3 cut(s) 210, 460, 796
Hpy99I CGWCG 2 cut(s) 51, 886
HpyAV CCTTC 7 cut(s) 316, 831, 958, 1035, 1049, 1089, 1200
HpyCH4III ACNGT 1 cut(s) 1201
HpyCH4IV ACGT 2 cut(s) 884, 1145
HpyCH4V TGCA 7 cut(s) 32, 39, 91, 278, 580, 644, 1130
HpyF10VI GCNNNNNNNGC 2 cut(s) 29, 88
HpyF3I CTNAG 5 cut(s) 7, 85, 446, 520, 772
HpySE526I ACGT 2 cut(s) 884, 1145
Hsp92II CATG 7 cut(s) 335, 472, 542, 584, 718, 1226, 1240
HspAI GCGC 3 cut(s) 57, 82, 749
KpnI GGTACC 1 cut(s) 1167
Kzo9I GATC 5 cut(s) 93, 109, 132, 479, 567
LmnI GCTCC 1 cut(s) 1058
Lsp1109I GCAGC 3 cut(s) 733, 1114, 1182
LweI GCATC 1 cut(s) 631
MaeI CTAG 2 cut(s) 1074, 1270
MaeII ACGT 2 cut(s) 884, 1145
MaeIII GTNAC 3 cut(s) 136, 689, 775
MalI GATC 5 cut(s) 95, 111, 134, 481, 569
MboI GATC 5 cut(s) 93, 109, 132, 479, 567
MboII GAAGA 6 cut(s) 142, 402, 596, 872, 907, 1252
MfeI CAATTG 1 cut(s) 453
MhlI GDGCHC 1 cut(s) 157
MlsI TGGCCA 1 cut(s) 680
MluCI AATT 4 cut(s) 250, 362, 453, 914
MluNI TGGCCA 1 cut(s) 680
MlyI GAGTC 1 cut(s) 727
MmeI TCCRAC 4 cut(s) 29, 1032, 1089, 1178
MnlI CCTC 9 cut(s) 257, 260, 430, 455, 557, 716, 720, 940, 1009
Mox20I TGGCCA 1 cut(s) 680
MroXI GAANNNNTTC 2 cut(s) 534, 630
MscI TGGCCA 1 cut(s) 680
MseI TTAA 1 cut(s) 819
MslI CAYNNNNRTG 2 cut(s) 784, 786
Msp20I TGGCCA 1 cut(s) 680
MspA1I CMGCKG 2 cut(s) 314, 766
MspI CCGG 2 cut(s) 104, 909
MspR9I CCNGG 2 cut(s) 104, 909
MunI CAATTG 1 cut(s) 453
Mva1269I GAATGC 2 cut(s) 593, 813
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 2 cut(s) 29, 88
NciI CCSGG 2 cut(s) 104, 909
NdeII GATC 5 cut(s) 93, 109, 132, 479, 567
NlaIII CATG 7 cut(s) 335, 472, 542, 584, 718, 1226, 1240
NlaIV GGNNCC 3 cut(s) 307, 878, 1165
NmeAIII GCCGAG 2 cut(s) 287, 893
OliI CACNNNNGTG 1 cut(s) 786
PagI TCATGA 2 cut(s) 538, 1236
PceI AGGCCT 1 cut(s) 1024
PctI GAATGC 2 cut(s) 593, 813
PdmI GAANNNNTTC 2 cut(s) 534, 630
PfeI GAWTC 3 cut(s) 43, 841, 1069
PflMI CCANNNNNTGG 1 cut(s) 1160
PkrI GCNGC 4 cut(s) 316, 748, 1129, 1172
Ple19I CGATCG 1 cut(s) 112
PleI GAGTC 1 cut(s) 727
PpsI GAGTC 1 cut(s) 727
PsiI TTATAA 2 cut(s) 176, 285
PspFI CCCAGC 1 cut(s) 310
PspN4I GGNNCC 3 cut(s) 307, 878, 1165
PspPI GGNCC 1 cut(s) 412
PvuI CGATCG 1 cut(s) 112
RsaI GTAC 6 cut(s) 382, 467, 494, 797, 1165, 1221
RsaNI GTAC 6 cut(s) 381, 466, 493, 796, 1164, 1220
RseI CAYNNNNRTG 2 cut(s) 784, 786
SaqAI TTAA 1 cut(s) 819
SatI GCNGC 4 cut(s) 315, 747, 1128, 1171
Sau3AI GATC 5 cut(s) 93, 109, 132, 479, 567
Sau96I GGNCC 1 cut(s) 412
ScaI AGTACT 1 cut(s) 494
SchI GAGTC 1 cut(s) 727
ScrFI CCNGG 2 cut(s) 104, 909
SduI GDGCHC 1 cut(s) 157
SfaNI GCATC 1 cut(s) 631
SinI GGWCC 1 cut(s) 412
SmiMI CAYNNNNRTG 2 cut(s) 784, 786
Sse9I AATT 4 cut(s) 250, 362, 453, 914
SseBI AGGCCT 1 cut(s) 1024
SsiI CCGC 3 cut(s) 314, 371, 766
SspI AATATT 4 cut(s) 16, 294, 631, 823
SspMI CTAG 2 cut(s) 1074, 1270
StuI AGGCCT 1 cut(s) 1024
StyD4I CCNGG 2 cut(s) 102, 907
TaaI ACNGT 1 cut(s) 1201
TaiI ACGT 2 cut(s) 887, 1148
TaqI TCGA 1 cut(s) 858
TasI AATT 4 cut(s) 250, 362, 453, 914
TatI WGTACW 3 cut(s) 465, 492, 795
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 3 cut(s) 43, 841, 1069
Tru1I TTAA 1 cut(s) 819
Tru9I TTAA 1 cut(s) 819
TscAI CASTG 2 cut(s) 39, 324
TseI GCWGC 3 cut(s) 746, 1127, 1170
TspDTI ATGAA 4 cut(s) 372, 527, 597, 1253
TspGWI ACGGA 3 cut(s) 140, 404, 613
TspRI CASTG 2 cut(s) 39, 324
Van91I CCANNNNNTGG 1 cut(s) 1160
VpaK11BI GGWCC 1 cut(s) 412
XmnI GAANNNNTTC 2 cut(s) 534, 630
XspI CTAG 2 cut(s) 1074, 1270
ZrmI AGTACT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.