Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000690

Physical Location & Seq

Genomic Coordinates Forward (+)

16757600 .. 16770651

Gene Structure 13052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00346100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGCACGATCATATTCTAATGACACGTGTCGATCCCGTACGACATCTGCAGCATCCATCTTTTGACCTCGCCGTAGCCAATCCCGCCCTCCTTCTTCTTCGCCGCTTTGATCGGTCTCCGTGTCACCGGCCGAAACTTGAGCAAGAGCACGGCGTCCTCGTCGTCGAGCCAGAAGTACTAGTACAAAACGACGACGTTGGGGCAACCGTGGAGCGTCCGGAGGGCCTCGATTTCGCGAAAGCCGACCGGCCCGACTCGGCCCTAGTGGCACTGGCCTTCAAGTGGCTGCTCTTAGAGCAACTTAAAACTTGGGCAACAAGCTCAAAGCAGGAGCTGGCAGTTTGGGATAATTCTCGGATGAATTTTCTAAGCGGGGAGCTGGAAAATATCATGTCTTTGATGTCTATATTGCATGATGCTAATGGGTTTTCGTTGTTGTATTTTGCAGTACTCTTTTTTGTGAAGATCATAATATTGGTTGCAGAATGCAAAAGAAGGAATCAGAGTAGGATCTCTGATAACCCAAGTTTTCTGACTCTCACAATGAACAAATTTCTGAATGATATGGAAACAGAGAAGCCCATCAGATTTACTTCTCAACAACTTCAGATTGCAACTGATAACTTCACCAACTTGCTGGATTCAGGAGGGTTTGGTGCAGTTTATAAAGGAATATTTAGTAATGGAACCTTTGTTGCAGTGAAGGTTCTAAATGGTACCTCGGACAAGGGAATTGAAGAACAATTCATGGCGGAAGTTAGTACCCTTGGCAGGATTCATCATATCAACTTGGTTCGTCTTCATGGTTTCTGCTTTGAGAGACACCTCAGAGCACTTGTTTATGAGTATATGCCAAATGGTTCGCTTGACAAGTTTCTTTTCCATGGAAACCAGATTTTAGGATTCGAAAAGCTTCATGAAATTGCAGTTGGGACAGCTAGAGGGATTGCTTACTTGCACGAAGAATGCCAGCAGCGGATAGTCCACTACGATATAAAACCTGAAAATATTCTTTTAGATGTGAACTTCTTTCCTAAAGTAGCTGATTTTGGTTTGGCCAACCTGTCCAACAGAGACAAGACTCATATAACAATGACAGGGTGGAGGGGAACCCGTGGTTATGCTGCACCAGAAGTTTGCCTGCGGTATCCTATAACCCACAAGTGTGATGTGTACAGCTTTGGAATGCTATTATTTGAGATCATAGGTAGAAGAAGGAACCTAGACCTGAATCTGCCGGAGAGTCAAGACTGGTTTCCAATGTGGGGATGGAAGAAGTTTGAAGCTGGTGAACTAGAAGAACTAATGGTAGGATGTGGTATAGATGAAAAAGATATGGAGGCAGCAGAGAGAATGGTAAAAGTAGGTATATGGTGTGTTCACTATGGCTCTGAGTTGAGGCCTTTGATGAGTGTAGTGGTGAAAATGCTGGAAGGAGCATTTGAAATTCCTAAACCTTCAATTAACCCATTTCAGTACTTGATGCCAGGTACTCCAATCGTGGCTGCTTTACCCGCATATAGCACTAGTGCATTCGACACTGATTCCTCTCAAAAGATAACCGGACATAGTTTCTTTCGTGGTACTCCTATCATGAGGAGATACGAAATTGAAATAGCATCTAGTATGCTGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

545

Amino Acids

62.0

Weight (kDa)

6.11

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	210 - 404	2.2e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	213 - 405	1.4e-40	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g07910
malus_domestica	MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica	Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis	pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis	RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata	RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora	Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii	Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa	Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha	Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana	Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	666
Acc65I	GGTACC	1 cut(s)	716
AccB1I	GGYRCC	1 cut(s)	716
AccII	CGCG	1 cut(s)	236
AccIII	TCCGGA	1 cut(s)	217
AciI	CCGC	7 cut(s)	84, 103, 372, 752, 976, 1144, 1515
AclWI	GGATC	2 cut(s)	26, 518
AcoI	YGGCCR	2 cut(s)	128, 1056
AcsI	RAATTY	3 cut(s)	361, 551, 1446
AcuI	CTGAAG	1 cut(s)	590
AcvI	CACGTG	1 cut(s)	26
AcyI	GRCGYC	1 cut(s)	153
AfiI	CCNNNNNNNGG	3 cut(s)	282, 771, 1265
AflIII	ACRYGT	2 cut(s)	23, 25
AgsI	TTSAA	6 cut(s)	280, 737, 1283, 1445, 1461, 1613
AhlI	ACTAGT	2 cut(s)	178, 1526
AjnI	CCWGG	1 cut(s)	1486
AjuI	GAANNNNNNNTTGG	2 cut(s)	912, 944
AleI	CACNNNNGTG	1 cut(s)	1164
AluBI	AGCT	8 cut(s)	321, 334, 379, 913, 938, 1043, 1179, 1286
AluI	AGCT	8 cut(s)	321, 334, 379, 913, 938, 1043, 1179, 1286
Alw21I	GWGCWC	2 cut(s)	150, 835
Alw26I	GTCTC	3 cut(s)	120, 814, 1068
AlwI	GGATC	2 cut(s)	26, 518
AlwNI	CAGNNNCTG	1 cut(s)	334
Aor13HI	TCCGGA	1 cut(s)	217
AoxI	GGCC	7 cut(s)	128, 223, 248, 258, 273, 1056, 1400
ApeKI	GCWGC	6 cut(s)	49, 286, 973, 1124, 1343, 1505
ApoI	RAATTY	3 cut(s)	361, 551, 1446
Asp700I	GAANNNNTTC	2 cut(s)	912, 1008
Asp718I	GGTACC	1 cut(s)	716
AspS9I	GGNCC	3 cut(s)	223, 249, 259
AsuHPI	GGTGA	4 cut(s)	116, 619, 1301, 1432
AsuII	TTCGAA	1 cut(s)	906
BalI	TGGCCA	1 cut(s)	1058
BanI	GGYRCC	1 cut(s)	716
BarI	GAAGNNNNNNTAC	2 cut(s)	165, 197
BbrPI	CACGTG	1 cut(s)	26
BbsI	GAAGAC	1 cut(s)	791
Bbv12I	GWGCWC	2 cut(s)	150, 835
BbvI	GCAGC	6 cut(s)	61, 273, 985, 1111, 1355, 1492
BccI	CCATC	3 cut(s)	64, 590, 1263
BceAI	ACGGC	2 cut(s)	56, 166
BciT130I	CCWGG	1 cut(s)	1488
BciVI	GTATCC	1 cut(s)	1158
BcoDI	GTCTC	3 cut(s)	120, 814, 1068
BcuI	ACTAGT	2 cut(s)	178, 1526
BfaI	CTAG	7 cut(s)	179, 263, 939, 1223, 1295, 1527, 1623
BfmI	CTRYAG	1 cut(s)	47
BfuI	GTATCC	1 cut(s)	1158
BglI	GCCNNNNNGGC	1 cut(s)	266
BisI	GCNGC	7 cut(s)	50, 103, 287, 974, 1125, 1344, 1506
BlsI	GCNGC	7 cut(s)	51, 104, 288, 975, 1126, 1345, 1507
BmcAI	AGTACT	3 cut(s)	177, 450, 1478
Bme1390I	CCNGG	1 cut(s)	1488
BmgT120I	GGNCC	3 cut(s)	223, 249, 259
BmiI	GGNNCC	4 cut(s)	688, 718, 1111, 1220
BmrFI	CCNGG	1 cut(s)	1488
BmsI	GCATC	4 cut(s)	61, 406, 1473, 1628
BoxI	GACNNNNGTC	1 cut(s)	26
BpiI	GAAGAC	1 cut(s)	791
Bpu14I	TTCGAA	1 cut(s)	906
BpuEI	CTTGAG	1 cut(s)	158
BsaAI	YACGTR	1 cut(s)	26
BsaHI	GRCGYC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	120
BsaJI	CCNNGG	5 cut(s)	207, 720, 766, 883, 1114
BsaWI	WCCGGW	2 cut(s)	217, 1562
Bsc4I	CCNNNNNNNGG	3 cut(s)	282, 771, 1265
Bse118I	RCCGGY	2 cut(s)	126, 246
Bse1I	ACTGG	2 cut(s)	276, 1256
BseAI	TCCGGA	1 cut(s)	217
BseBI	CCWGG	1 cut(s)	1488
BseDI	CCNNGG	5 cut(s)	207, 720, 766, 883, 1114
BseGI	GGATG	4 cut(s)	52, 363, 1274, 1319
BseLI	CCNNNNNNNGG	3 cut(s)	282, 771, 1265
BseMII	CTCAG	2 cut(s)	841, 1383
BseNI	ACTGG	2 cut(s)	276, 1256
BseRI	GAGGAG	1 cut(s)	1612
BseX3I	CGGCCG	1 cut(s)	128
BseXI	GCAGC	6 cut(s)	61, 273, 985, 1111, 1355, 1492
BsgI	GTGCAG	2 cut(s)	678, 1110
Bsh1236I	CGCG	1 cut(s)	236
Bsh1285I	CGRYCG	2 cut(s)	131, 247
BshFI	GGCC	7 cut(s)	130, 225, 250, 260, 275, 1058, 1402
BshNI	GGYRCC	1 cut(s)	716
BsiEI	CGRYCG	2 cut(s)	131, 247
BsiHKAI	GWGCWC	2 cut(s)	150, 835
BsiSI	CCGG	5 cut(s)	127, 218, 247, 1238, 1563
BsiWI	CGTACG	1 cut(s)	37
BslFI	GGGAC	1 cut(s)	946
BslI	CCNNNNNNNGG	3 cut(s)	282, 771, 1265
BsmAI	GTCTC	3 cut(s)	120, 814, 1068
BsmFI	GGGAC	1 cut(s)	946
BsmI	GAATGC	4 cut(s)	491, 971, 1191, 1532
BsnI	GGCC	7 cut(s)	130, 225, 250, 260, 275, 1058, 1402
Bso31I	GGTCTC	1 cut(s)	120
Bsp119I	TTCGAA	1 cut(s)	906
Bsp1286I	GDGCHC	2 cut(s)	150, 835
Bsp13I	TCCGGA	1 cut(s)	217
Bsp1407I	TGTACA	1 cut(s)	1173
Bsp143I	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
Bsp19I	CCATGG	1 cut(s)	883
Bsp68I	TCGCGA	1 cut(s)	236
BspACI	CCGC	7 cut(s)	84, 103, 372, 752, 976, 1144, 1515
BspANI	GGCC	7 cut(s)	130, 225, 250, 260, 275, 1058, 1402
BspCNI	CTCAG	2 cut(s)	840, 1384
BspEI	TCCGGA	1 cut(s)	217
BspFNI	CGCG	1 cut(s)	236
BspHI	TCATGA	2 cut(s)	916, 1593
BspLI	GGNNCC	4 cut(s)	688, 718, 1111, 1220
BspMAI	CTGCAG	1 cut(s)	51
BspPI	GGATC	2 cut(s)	26, 518
BspT104I	TTCGAA	1 cut(s)	906
BspT107I	GGYRCC	1 cut(s)	716
BspTNI	GGTCTC	1 cut(s)	120
BsrFI	RCCGGY	2 cut(s)	126, 246
BsrGI	TGTACA	1 cut(s)	1173
BsrI	ACTGG	2 cut(s)	276, 1256
BssAI	RCCGGY	2 cut(s)	126, 246
BssECI	CCNNGG	5 cut(s)	207, 720, 766, 883, 1114
BssMI	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
BssNI	GRCGYC	1 cut(s)	153
BssT1I	CCWWGG	2 cut(s)	766, 883
Bst2UI	CCWGG	1 cut(s)	1488
Bst4CI	ACNGT	1 cut(s)	208
BstACI	GRCGYC	1 cut(s)	153
BstAUI	TGTACA	1 cut(s)	1173
BstBAI	YACGTR	1 cut(s)	26
BstBI	TTCGAA	1 cut(s)	906
BstC8I	GCNNGC	3 cut(s)	336, 971, 1142
BstDEI	CTNAG	4 cut(s)	292, 368, 827, 1392
BstDSI	CCRYGG	3 cut(s)	207, 883, 1114
BstF5I	GGATG	4 cut(s)	52, 363, 1274, 1319
BstFNI	CGCG	1 cut(s)	236
BstKTI	GATC	6 cut(s)	10, 34, 112, 468, 513, 1203
BstMAI	GTCTC	3 cut(s)	120, 814, 1068
BstMBI	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
BstMCI	CGRYCG	2 cut(s)	131, 247
BstMWI	GCNNNNNNNGC	4 cut(s)	83, 266, 295, 1514
BstNI	CCWGG	1 cut(s)	1488
BstPAI	GACNNNNGTC	1 cut(s)	26
BstSCI	CCNGG	1 cut(s)	1486
BstSFI	CTRYAG	1 cut(s)	47
BstUI	CGCG	1 cut(s)	236
BstV1I	GCAGC	6 cut(s)	61, 273, 985, 1111, 1355, 1492
BstV2I	GAAGAC	1 cut(s)	791
BstX2I	RGATCY	1 cut(s)	510
BstXI	CCANNNNNNTGG	1 cut(s)	637
BstYI	RGATCY	1 cut(s)	510
BstZI	CGGCCG	1 cut(s)	128
BsuI	GTATCC	1 cut(s)	1158
BsuRI	GGCC	7 cut(s)	130, 225, 250, 260, 275, 1058, 1402
BtgI	CCRYGG	3 cut(s)	207, 883, 1114
BtsCI	GGATG	4 cut(s)	52, 363, 1274, 1319
BtsI	GCAGTG	1 cut(s)	705
BtsIMutI	CAGTG	3 cut(s)	269, 705, 1539
BtuMI	TCGCGA	1 cut(s)	236
Cac8I	GCNNGC	3 cut(s)	336, 971, 1142
CaiI	CAGNNNCTG	1 cut(s)	334
CciI	TCATGA	2 cut(s)	916, 1593
Cfr10I	RCCGGY	2 cut(s)	126, 246
Cfr13I	GGNCC	3 cut(s)	223, 249, 259
CseI	GACGC	2 cut(s)	142, 203
CviAII	CATG	7 cut(s)	391, 413, 748, 803, 884, 917, 1594
DdeI	CTNAG	4 cut(s)	292, 368, 827, 1392
DpnI	GATC	6 cut(s)	9, 33, 111, 467, 512, 1202
DpnII	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
EaeI	YGGCCR	2 cut(s)	128, 1056
EagI	CGGCCG	1 cut(s)	128
EciI	GGCGGA	1 cut(s)	767
EclXI	CGGCCG	1 cut(s)	128
Eco130I	CCWWGG	2 cut(s)	766, 883
Eco147I	AGGCCT	1 cut(s)	1402
Eco31I	GGTCTC	1 cut(s)	120
Eco52I	CGGCCG	1 cut(s)	128
Eco57I	CTGAAG	1 cut(s)	590
Eco72I	CACGTG	1 cut(s)	26
EcoO109I	RGGNCCY	1 cut(s)	223
EcoRII	CCWGG	1 cut(s)	1486
EcoT14I	CCWWGG	2 cut(s)	766, 883
ErhI	CCWWGG	2 cut(s)	766, 883
FaeI	CATG	7 cut(s)	394, 416, 751, 806, 887, 920, 1597
FaqI	GGGAC	1 cut(s)	946
FatI	CATG	7 cut(s)	390, 412, 747, 802, 883, 916, 1593
FauI	CCCGC	3 cut(s)	91, 365, 1522
Fnu4HI	GCNGC	7 cut(s)	50, 103, 287, 974, 1125, 1344, 1506
FokI	GGATG	4 cut(s)	39, 370, 1281, 1326
Fsp4HI	GCNGC	7 cut(s)	50, 103, 287, 974, 1125, 1344, 1506
FspBI	CTAG	7 cut(s)	179, 263, 939, 1223, 1295, 1527, 1623
GluI	GCNGC	7 cut(s)	50, 103, 287, 974, 1125, 1344, 1506
HaeIII	GGCC	7 cut(s)	130, 225, 250, 260, 275, 1058, 1402
HapII	CCGG	5 cut(s)	127, 218, 247, 1238, 1563
HgaI	GACGC	2 cut(s)	142, 203
Hin1I	GRCGYC	1 cut(s)	153
Hin1II	CATG	7 cut(s)	394, 416, 751, 806, 887, 920, 1597
HindIII	AAGCTT	1 cut(s)	911
HpaII	CCGG	5 cut(s)	127, 218, 247, 1238, 1563
HphI	GGTGA	4 cut(s)	116, 619, 1301, 1432
Hpy166II	GTNNAC	5 cut(s)	985, 1024, 1174, 1292, 1381
Hpy188III	TCNNGA	6 cut(s)	218, 235, 645, 917, 1247, 1594
Hpy8I	GTNNAC	5 cut(s)	985, 1024, 1174, 1292, 1381
Hpy99I	CGWCG	4 cut(s)	164, 167, 194, 197
HpyAV	CCTTC	7 cut(s)	101, 286, 489, 697, 1209, 1427, 1467
HpyCH4III	ACNGT	1 cut(s)	208
HpyCH4IV	ACGT	2 cut(s)	25, 195
HpyF10VI	GCNNNNNNNGC	4 cut(s)	83, 266, 295, 1514
HpyF3I	CTNAG	4 cut(s)	292, 368, 827, 1392
HpySE526I	ACGT	2 cut(s)	25, 195
Hsp92I	GRCGYC	1 cut(s)	153
Hsp92II	CATG	7 cut(s)	394, 416, 751, 806, 887, 920, 1597
Kpn2I	TCCGGA	1 cut(s)	217
KpnI	GGTACC	1 cut(s)	720
Kzo9I	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
LmnI	GCTCC	4 cut(s)	211, 331, 376, 1436
Lsp1109I	GCAGC	6 cut(s)	61, 273, 985, 1111, 1355, 1492
LweI	GCATC	4 cut(s)	61, 406, 1473, 1628
MaeI	CTAG	7 cut(s)	179, 263, 939, 1223, 1295, 1527, 1623
MaeII	ACGT	2 cut(s)	25, 195
MaeIII	GTNAC	1 cut(s)	122
MalI	GATC	6 cut(s)	9, 33, 111, 467, 512, 1202
MboI	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
MboII	GAAGA	9 cut(s)	86, 89, 475, 749, 791, 974, 1224, 1285, 1310
MflI	RGATCY	1 cut(s)	510
MhlI	GDGCHC	2 cut(s)	150, 835
MlsI	TGGCCA	1 cut(s)	1058
MluCI	AATT	9 cut(s)	349, 361, 551, 732, 743, 921, 1446, 1461, 1608
MluNI	TGGCCA	1 cut(s)	1058
MlyI	GAGTC	4 cut(s)	248, 529, 1075, 1252
MmeI	TCCRAC	1 cut(s)	1092
Mox20I	TGGCCA	1 cut(s)	1058
MroI	TCCGGA	1 cut(s)	217
MroXI	GAANNNNTTC	2 cut(s)	912, 1008
MscI	TGGCCA	1 cut(s)	1058
MseI	TTAA	2 cut(s)	303, 1464
MslI	CAYNNNNRTG	1 cut(s)	1164
Msp20I	TGGCCA	1 cut(s)	1058
MspA1I	CMGCKG	1 cut(s)	976
MspI	CCGG	5 cut(s)	127, 218, 247, 1238, 1563
MspR9I	CCNGG	1 cut(s)	1488
Mva1269I	GAATGC	4 cut(s)	491, 971, 1191, 1532
MvaI	CCWGG	1 cut(s)	1488
MvnI	CGCG	1 cut(s)	236
MwoI	GCNNNNNNNGC	4 cut(s)	83, 266, 295, 1514
NcoI	CCATGG	1 cut(s)	883
NdeII	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
NlaIII	CATG	7 cut(s)	394, 416, 751, 806, 887, 920, 1597
NlaIV	GGNNCC	4 cut(s)	688, 718, 1111, 1220
NmeAIII	GCCGAG	1 cut(s)	236
NmuCI	GTSAC	1 cut(s)	122
NruI	TCGCGA	1 cut(s)	236
NspV	TTCGAA	1 cut(s)	906
OliI	CACNNNNGTG	1 cut(s)	1164
PagI	TCATGA	2 cut(s)	916, 1593
PceI	AGGCCT	1 cut(s)	1402
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 240
PctI	GAATGC	4 cut(s)	491, 971, 1191, 1532
PdmI	GAANNNNTTC	2 cut(s)	912, 1008
PfeI	GAWTC	6 cut(s)	499, 641, 775, 903, 1231, 1544
Pfl23II	CGTACG	1 cut(s)	37
PkrI	GCNGC	7 cut(s)	51, 104, 288, 975, 1126, 1345, 1507
PleI	GAGTC	4 cut(s)	248, 529, 1075, 1251
PmaCI	CACGTG	1 cut(s)	26
PmlI	CACGTG	1 cut(s)	26
PpsI	GAGTC	4 cut(s)	248, 529, 1075, 1251
Ppu21I	YACGTR	1 cut(s)	26
PshAI	GACNNNNGTC	1 cut(s)	26
PsiI	TTATAA	1 cut(s)	666
Psp6I	CCWGG	1 cut(s)	1486
PspCI	CACGTG	1 cut(s)	26
PspGI	CCWGG	1 cut(s)	1486
PspLI	CGTACG	1 cut(s)	37
PspN4I	GGNNCC	4 cut(s)	688, 718, 1111, 1220
PspPI	GGNCC	3 cut(s)	223, 249, 259
PstI	CTGCAG	1 cut(s)	51
PstNI	CAGNNNCTG	1 cut(s)	334
PsuI	RGATCY	1 cut(s)	510
RruI	TCGCGA	1 cut(s)	236
RseI	CAYNNNNRTG	1 cut(s)	1164
SaqAI	TTAA	2 cut(s)	303, 1464
SatI	GCNGC	7 cut(s)	50, 103, 287, 974, 1125, 1344, 1506
Sau3AI	GATC	6 cut(s)	7, 31, 109, 465, 510, 1200
Sau96I	GGNCC	3 cut(s)	223, 249, 259
ScaI	AGTACT	3 cut(s)	177, 450, 1478
SchI	GAGTC	4 cut(s)	248, 529, 1075, 1252
ScrFI	CCNGG	1 cut(s)	1488
SduI	GDGCHC	2 cut(s)	150, 835
SfaNI	GCATC	4 cut(s)	61, 406, 1473, 1628
SfcI	CTRYAG	1 cut(s)	47
SfuI	TTCGAA	1 cut(s)	906
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SmlI	CTYRAG	1 cut(s)	137
SmoI	CTYRAG	1 cut(s)	137
SpeI	ACTAGT	2 cut(s)	178, 1526
Sse9I	AATT	9 cut(s)	349, 361, 551, 732, 743, 921, 1446, 1461, 1608
SseBI	AGGCCT	1 cut(s)	1402
SsiI	CCGC	7 cut(s)	84, 103, 372, 752, 976, 1144, 1515
SspI	AATATT	3 cut(s)	474, 675, 1009
SspMI	CTAG	7 cut(s)	179, 263, 939, 1223, 1295, 1527, 1623
StuI	AGGCCT	1 cut(s)	1402
StyD4I	CCNGG	1 cut(s)	1486
StyI	CCWWGG	2 cut(s)	766, 883
TaaI	ACNGT	1 cut(s)	208
TaiI	ACGT	2 cut(s)	28, 198
TaqI	TCGA	5 cut(s)	30, 165, 228, 906, 1536
TaqII	GACCGA	1 cut(s)	102
TasI	AATT	9 cut(s)	349, 361, 551, 732, 743, 921, 1446, 1461, 1608
TatI	WGTACW	5 cut(s)	175, 181, 448, 1173, 1476
TauI	GCSGC	1 cut(s)	105
TfiI	GAWTC	6 cut(s)	499, 641, 775, 903, 1231, 1544
Tru1I	TTAA	2 cut(s)	303, 1464
Tru9I	TTAA	2 cut(s)	303, 1464
TscAI	CASTG	3 cut(s)	276, 705, 1546
TseFI	GTSAC	1 cut(s)	122
TseI	GCWGC	6 cut(s)	49, 286, 973, 1124, 1343, 1505
Tsp45I	GTSAC	1 cut(s)	122
TspDTI	ATGAA	8 cut(s)	374, 560, 736, 767, 791, 905, 933, 1341
TspGWI	ACGGA	1 cut(s)	108
TspRI	CASTG	3 cut(s)	276, 705, 1546
XapI	RAATTY	3 cut(s)	361, 551, 1446
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1266
XmnI	GAANNNNTTC	2 cut(s)	912, 1008
XspI	CTAG	7 cut(s)	179, 263, 939, 1223, 1295, 1527, 1623
ZrmI	AGTACT	3 cut(s)	177, 450, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.