Rorug04G0029000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
4090718 .. 4101246
10529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0029000.1

Sequence Viewer

Length: 1821 bp
ATGCCCTCAGCTCCAATTCTCCTATCCCTCTTCTTCATTTTCCTCTCTGCATATTCCCACATCTTCCTCCACCCAGCTCTCGCCGATGGCGTCACTCCCGAGGAGGCCAAGCAGCTCAGGGACGAGGTCAGGGAAATGTTTTATCATGCATTTAATGGTTACATGGACCATGCTTTCCCACTTGATGAATTAAGGCCTCATTCTTGTGGGGGTGAAGATAGCCTCGGTGGATATGCCCTAACTTTGATTGACGCTTTAGACACACTAGCTTTACTTGGTGATCGGGACCGCTTTGCTGCCTCTGTTGAATGGATTGGTAAAAACCTTCAGTTTAATATAAATAAGACAGTATCTGTTTTTGAGACTACCATCCGGGTCCTCGGGGGTTTGCTCTCCGCACATCTTATAGCAAGCGATTATGCTACGGGCATGAGAATTCCAACATATGACAACCAGTTGCTGAACTTAGCTGAGGATCTAGGTCGACGATTGTTACCTGCATTCGACACTCCTTCAGGAATTCCTTTTGGATCTGTCAATCTAATGTATGGAGTTGATGAACATGAAAGCAGGATTACATCAACAGCTGGTGGTGGGACTTTGAGTTTGGAATTTGGAGTGCTCAGCCGATTGACAAATGATCCCATATTTGAACAAGTTACCAAGAACGCAGTGCGTGGACTTTGGGCTCGCCGTTCAAAGCTCAATTTAGTTGGTGCCCATATTAATGTTTTTACAGGTGAATGGACACAGAAGGATGCTGGAATAGGAACTAGTATTGATTCTTTCTATGAGTATCTTCTAAAGGCCTATCTGTTATTTGGAGATGAAGAATATCTGTACATATTTCAAGAAGCTTATGCCGCTGCTATGCACTGTCTTTATAATGATCCTTGGTATGTAGAGGTAAATATGGATTCTGCTGCTGTTGTGTGGCCATTGTTTAACAGTTTGCAAGCATTCTGGCCAGGACTTCAGGTTTTAGCTGGAGATATTGATCCTGCAATTCGAACTCATACTGCCTTCTTTAGTGTATGGAAAAGATATGGTTTCACTCCAGAAGGTTTCAATCTTGCTACATTCAGTGTTCAGCATGGACAAAGAAGTTATCCGCTGCGTCCAGAGTTAATGGAGAGCACATATTGGCTCTATAAAGCTACTAGAGATCCCAAGTATCTTGATGCAGGACGTGAAATGGTTGCCAGCTTACAGTACAGTGCACGGTGCCCCTGTGGATATTGTCATATCTCAGATGTAGAGTTCCATAAGCAGGAAGATCATATGGAGAGTTTCTTTCTAGCCGAAACAGTTAAATATTTGTGGCTACTCTTTGATTTGGCTGTGGGACCTGATAACCTTGTTGATAATGGACCATACAAGTACATCTTTAGTACTGAAGGCCACCTATTGCCCGCAACCCCTGAAATATCTTTAGTGCAGGAACATTGCTCATATTTTGGGGCTTATTGTAATACTAGCAACATTAGACAGGATGCATCAGATGTTGCAACTAATCCTCTAGATAACTTACATGGAAGGGTTGGCACTGCATTACCATCTAACTCCCGTTTTTCTGATTCAACTCCTTTATCAGGATTAATAAAAGGGGTTTGCCCAGGACTAACTCATGGGCAAAAGTTTGGTATATCATATGTGTTACCAAGCCACAGAGCTCATGAGGATGTCTCCAGGAACCAAGGAGAGCAAACTAATGCTGAGAGCCATTCAATGGTGGTAGTGCAAAGCCAAAATTCTGATTACTCACCATCAGAAAATAAGAATTACCATGAAAAGTTGGTGGAATCGAGTGAGGGAGAATGA

Protein Analysis

606

Amino Acids

67.71

Weight (kDa)

5.08

Isoelectric Point (pI)

41.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_47 PF01532 46 - 471 1.5e-118 Glycosyl hydrolase family 47
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 885
Acc36I ACCTGC 1 cut(s) 505
AccB1I GGYRCC 2 cut(s) 716, 1224
AccB7I CCANNNNNTGG 1 cut(s) 1729
AccI GTMKAC 1 cut(s) 484
AciI CCGC 5 cut(s) 289, 396, 864, 1112, 1413
AclWI GGATC 6 cut(s) 483, 538, 635, 884, 992, 1160
AcoI YGGCCR 2 cut(s) 935, 965
AcsI RAATTY 4 cut(s) 435, 519, 611, 1750
AcuI CTGAAG 4 cut(s) 311, 498, 959, 1416
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 4 cut(s) 842, 1214, 1382, 1393
AfiI CCNNNNNNNGG 3 cut(s) 1270, 1592, 1729
AgsI TTSAA 7 cut(s) 308, 653, 699, 851, 1069, 1581, 1728
AhlI ACTAGT 1 cut(s) 773
AjiI CACGTC 1 cut(s) 1190
AjnI CCWGG 3 cut(s) 967, 1615, 1688
Alw21I GWGCWC 4 cut(s) 624, 1139, 1222, 1675
Alw26I GTCTC 2 cut(s) 356, 1690
Alw44I GTGCAC 1 cut(s) 1218
AlwI GGATC 6 cut(s) 483, 538, 635, 884, 992, 1160
AlwNI CAGNNNCTG 2 cut(s) 353, 460
Ama87I CYCGRG 2 cut(s) 98, 380
AoxI GGCC 6 cut(s) 105, 194, 807, 935, 965, 1399
ApaLI GTGCAC 1 cut(s) 1218
ApeKI GCWGC 5 cut(s) 112, 296, 866, 923, 1114
ApoI RAATTY 4 cut(s) 435, 519, 611, 1750
ArsI GACNNNNNNTTYG 2 cut(s) 589, 621
AseI ATTAAT 2 cut(s) 726, 1598
AspS9I GGNCC 5 cut(s) 166, 286, 376, 1346, 1370
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 4 cut(s) 224, 290, 752, 1755
AsuII TTCGAA 1 cut(s) 1009
AvaI CYCGRG 2 cut(s) 98, 380
AvaII GGWCC 5 cut(s) 166, 286, 376, 1346, 1370
BaeGI GKGCMC 3 cut(s) 721, 1222, 1229
BalI TGGCCA 2 cut(s) 937, 967
BanI GGYRCC 2 cut(s) 716, 1224
BanII GRGCYC 2 cut(s) 691, 1675
Bbv12I GWGCWC 4 cut(s) 624, 1139, 1222, 1675
BbvCI CCTCAGC 2 cut(s) 7, 471
BbvI GCAGC 5 cut(s) 124, 283, 853, 910, 1101
BccI CCATC 4 cut(s) 80, 377, 1564, 1774
BceAI ACGGC 1 cut(s) 678
BciT130I CCWGG 3 cut(s) 969, 1617, 1690
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 2 cut(s) 356, 1690
BcuI ACTAGT 1 cut(s) 773
BfaI CTAG 7 cut(s) 266, 479, 774, 1161, 1298, 1476, 1520
BfuAI ACCTGC 1 cut(s) 505
BisI GCNGC 6 cut(s) 113, 297, 864, 867, 924, 1115
BlpI GCTNAGC 1 cut(s) 623
BlsI GCNGC 6 cut(s) 114, 298, 865, 868, 925, 1116
BmcAI AGTACT 1 cut(s) 1393
Bme1390I CCNGG 4 cut(s) 374, 969, 1617, 1690
Bme18I GGWCC 5 cut(s) 166, 286, 376, 1346, 1370
BmeT110I CYCGRG 2 cut(s) 98, 380
BmgBI CACGTC 1 cut(s) 1190
BmgT120I GGNCC 5 cut(s) 166, 286, 376, 1346, 1370
BmiI GGNNCC 6 cut(s) 287, 377, 718, 1226, 1347, 1694
BmrFI CCNGG 4 cut(s) 374, 969, 1617, 1690
BmsI GCATC 4 cut(s) 748, 1171, 1483, 1505
BplI GAGNNNNNCTC 2 cut(s) 1670, 1702
BpmI CTGGAG 3 cut(s) 1008, 1041, 1672
Bpu10I CCTNAGC 3 cut(s) 7, 116, 471
Bpu1102I GCTNAGC 1 cut(s) 623
Bpu14I TTCGAA 1 cut(s) 1009
BpuMI CCSGG 1 cut(s) 374
BsaBI GATNNNNATC 1 cut(s) 996
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 6 cut(s) 99, 223, 379, 893, 1615, 1696
Bsc4I CCNNNNNNNGG 3 cut(s) 1270, 1592, 1729
Bse1I ACTGG 1 cut(s) 454
Bse3DI GCAATG 1 cut(s) 1444
Bse8I GATNNNNATC 1 cut(s) 996
BseBI CCWGG 3 cut(s) 969, 1617, 1690
BseDI CCNNGG 6 cut(s) 99, 223, 379, 893, 1615, 1696
BseGI GGATG 4 cut(s) 369, 763, 1498, 1687
BseJI GATNNNNATC 1 cut(s) 996
BseLI CCNNNNNNNGG 3 cut(s) 1270, 1592, 1729
BseMI GCAATG 1 cut(s) 1444
BseMII CTCAG 6 cut(s) 21, 130, 462, 637, 1263, 1707
BseNI ACTGG 1 cut(s) 454
BseRI GAGGAG 1 cut(s) 116
BseSI GKGCMC 3 cut(s) 721, 1222, 1229
BseXI GCAGC 5 cut(s) 124, 283, 853, 910, 1101
BseYI CCCAGC 1 cut(s) 73
BsgI GTGCAG 1 cut(s) 1457
BshFI GGCC 6 cut(s) 107, 196, 809, 937, 967, 1401
BshNI GGYRCC 2 cut(s) 716, 1224
BsiHKAI GWGCWC 4 cut(s) 624, 1139, 1222, 1675
BsiHKCI CYCGRG 2 cut(s) 98, 380
BsiSI CCGG 1 cut(s) 373
BslFI GGGAC 4 cut(s) 134, 299, 610, 1359
BslI CCNNNNNNNGG 3 cut(s) 1270, 1592, 1729
BsmAI GTCTC 2 cut(s) 356, 1690
BsmFI GGGAC 4 cut(s) 134, 299, 610, 1359
BsmI GAATGC 2 cut(s) 500, 959
BsnI GGCC 6 cut(s) 107, 196, 809, 937, 967, 1401
BsoBI CYCGRG 2 cut(s) 98, 380
Bsp119I TTCGAA 1 cut(s) 1009
Bsp1286I GDGCHC 7 cut(s) 624, 691, 721, 1139, 1222, 1229, 1675
Bsp1407I TGTACA 1 cut(s) 840
Bsp143I GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
Bsp1720I GCTNAGC 1 cut(s) 623
BspACI CCGC 5 cut(s) 289, 396, 864, 1112, 1413
BspANI GGCC 6 cut(s) 107, 196, 809, 937, 967, 1401
BspCNI CTCAG 6 cut(s) 20, 129, 463, 636, 1262, 1708
BspHI TCATGA 1 cut(s) 1675
BspLI GGNNCC 6 cut(s) 287, 377, 718, 1226, 1347, 1694
BspMI ACCTGC 1 cut(s) 505
BspPI GGATC 6 cut(s) 483, 538, 635, 884, 992, 1160
BspT104I TTCGAA 1 cut(s) 1009
BspT107I GGYRCC 2 cut(s) 716, 1224
BsrDI GCAATG 1 cut(s) 1444
BsrGI TGTACA 1 cut(s) 840
BsrI ACTGG 1 cut(s) 454
BssECI CCNNGG 6 cut(s) 99, 223, 379, 893, 1615, 1696
BssMI GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
BssNI GRCGYC 1 cut(s) 90
BssT1I CCWWGG 2 cut(s) 893, 1696
Bst2UI CCWGG 3 cut(s) 969, 1617, 1690
Bst4CI ACNGT 7 cut(s) 349, 878, 950, 1212, 1217, 1224, 1309
Bst6I CTCTTC 1 cut(s) 35
BstACI GRCGYC 1 cut(s) 90
BstAUI TGTACA 1 cut(s) 840
BstBI TTCGAA 1 cut(s) 1009
BstC8I GCNNGC 5 cut(s) 412, 691, 957, 1204, 1413
BstDEI CTNAG 7 cut(s) 7, 116, 466, 471, 623, 1249, 1716
BstENI CCTNNNNNAGG 1 cut(s) 1590
BstF5I GGATG 4 cut(s) 369, 763, 1498, 1687
BstKTI GATC 8 cut(s) 283, 478, 533, 643, 892, 1000, 1168, 1279
BstMAI GTCTC 2 cut(s) 356, 1690
BstMBI GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
BstMWI GCNNNNNNNGC 1 cut(s) 863
BstNI CCWGG 3 cut(s) 969, 1617, 1690
BstSCI CCNGG 4 cut(s) 372, 967, 1615, 1688
BstSLI GKGCMC 3 cut(s) 721, 1222, 1229
BstV1I GCAGC 5 cut(s) 124, 283, 853, 910, 1101
BstX2I RGATCY 3 cut(s) 475, 530, 1165
BstYI RGATCY 3 cut(s) 475, 530, 1165
BsuRI GGCC 6 cut(s) 107, 196, 809, 937, 967, 1401
BtrI CACGTC 1 cut(s) 1190
BtsCI GGATG 4 cut(s) 369, 763, 1498, 1687
BtsI GCAGTG 2 cut(s) 678, 1545
BtsIMutI CAGTG 5 cut(s) 678, 874, 1090, 1222, 1545
BveI ACCTGC 1 cut(s) 505
Cac8I GCNNGC 5 cut(s) 412, 691, 957, 1204, 1413
CaiI CAGNNNCTG 2 cut(s) 353, 460
CciI TCATGA 1 cut(s) 1675
Cfr13I GGNCC 5 cut(s) 166, 286, 376, 1346, 1370
CseI GACGC 3 cut(s) 79, 260, 1106
Csp6I GTAC 4 cut(s) 841, 1213, 1381, 1392
CviQI GTAC 4 cut(s) 841, 1213, 1381, 1392
DdeI CTNAG 7 cut(s) 7, 116, 466, 471, 623, 1249, 1716
DpnI GATC 8 cut(s) 282, 477, 532, 642, 891, 999, 1167, 1278
DpnII GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
EaeI YGGCCR 2 cut(s) 935, 965
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Ecl136II GAGCTC 1 cut(s) 1673
Eco130I CCWWGG 2 cut(s) 893, 1696
Eco147I AGGCCT 2 cut(s) 196, 809
Eco24I GRGCYC 2 cut(s) 691, 1675
Eco47I GGWCC 5 cut(s) 166, 286, 376, 1346, 1370
Eco53kI GAGCTC 1 cut(s) 1673
Eco57I CTGAAG 4 cut(s) 311, 498, 959, 1416
Eco88I CYCGRG 2 cut(s) 98, 380
EcoICRI GAGCTC 1 cut(s) 1673
EcoNI CCTNNNNNAGG 1 cut(s) 1590
EcoO109I RGGNCCY 2 cut(s) 376, 1346
EcoRI GAATTC 2 cut(s) 435, 519
EcoRII CCWGG 3 cut(s) 967, 1615, 1688
EcoT14I CCWWGG 2 cut(s) 893, 1696
EcoT22I ATGCAT 2 cut(s) 151, 1498
EcoT38I GRGCYC 2 cut(s) 691, 1675
ErhI CCWWGG 2 cut(s) 893, 1696
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 4 cut(s) 134, 299, 610, 1359
FauI CCCGC 1 cut(s) 1420
FauNDI CATATG 3 cut(s) 445, 1281, 1651
FblI GTMKAC 1 cut(s) 484
Fnu4HI GCNGC 6 cut(s) 113, 297, 864, 867, 924, 1115
FokI GGATG 4 cut(s) 356, 770, 1505, 1694
FriOI GRGCYC 2 cut(s) 691, 1675
Fsp4HI GCNGC 6 cut(s) 113, 297, 864, 867, 924, 1115
FspBI CTAG 7 cut(s) 266, 479, 774, 1161, 1298, 1476, 1520
GluI GCNGC 6 cut(s) 113, 297, 864, 867, 924, 1115
GsaI CCCAGC 1 cut(s) 77
GsuI CTGGAG 3 cut(s) 1008, 1041, 1672
HaeIII GGCC 6 cut(s) 107, 196, 809, 937, 967, 1401
HapII CCGG 1 cut(s) 373
HgaI GACGC 3 cut(s) 79, 260, 1106
Hin1I GRCGYC 1 cut(s) 90
HincII GTYRAC 1 cut(s) 485
HindII GTYRAC 1 cut(s) 485
HindIII AAGCTT 1 cut(s) 855
HinfI GANTC 4 cut(s) 782, 917, 1577, 1802
HpaII CCGG 1 cut(s) 373
HphI GGTGA 4 cut(s) 224, 290, 752, 1755
Hpy166II GTNNAC 3 cut(s) 485, 680, 1220
Hpy188I TCNGA 5 cut(s) 1252, 1501, 1576, 1756, 1771
Hpy8I GTNNAC 3 cut(s) 485, 680, 1220
Hpy99I CGWCG 1 cut(s) 489
HpyAV CCTTC 7 cut(s) 335, 522, 748, 1033, 1055, 1391, 1530
HpyCH4III ACNGT 7 cut(s) 349, 878, 950, 1212, 1217, 1224, 1309
HpyCH4IV ACGT 1 cut(s) 1189
HpyF10VI GCNNNNNNNGC 1 cut(s) 863
HpyF3I CTNAG 7 cut(s) 7, 116, 466, 471, 623, 1249, 1716
HpySE526I ACGT 1 cut(s) 1189
Hsp92I GRCGYC 1 cut(s) 90
Kzo9I GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
LmnI GCTCC 1 cut(s) 16
Lsp1109I GCAGC 5 cut(s) 124, 283, 853, 910, 1101
LweI GCATC 4 cut(s) 748, 1171, 1483, 1505
MaeI CTAG 7 cut(s) 266, 479, 774, 1161, 1298, 1476, 1520
MaeII ACGT 1 cut(s) 1189
MaeIII GTNAC 5 cut(s) 91, 158, 492, 658, 1656
MalI GATC 8 cut(s) 282, 477, 532, 642, 891, 999, 1167, 1278
MboI GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
MboII GAAGA 7 cut(s) 22, 25, 55, 227, 791, 842, 1286
MflI RGATCY 3 cut(s) 475, 530, 1165
MhlI GDGCHC 7 cut(s) 624, 691, 721, 1139, 1222, 1229, 1675
MlsI TGGCCA 2 cut(s) 937, 967
MluCI AATT 9 cut(s) 15, 188, 435, 519, 611, 706, 1005, 1750, 1780
MluNI TGGCCA 2 cut(s) 937, 967
MmeI TCCRAC 1 cut(s) 464
Mox20I TGGCCA 2 cut(s) 937, 967
Mph1103I ATGCAT 2 cut(s) 151, 1498
MscI TGGCCA 2 cut(s) 937, 967
MseI TTAA 8 cut(s) 153, 191, 333, 726, 945, 1127, 1311, 1598
MslI CAYNNNNRTG 3 cut(s) 204, 726, 1680
Msp20I TGGCCA 2 cut(s) 937, 967
MspA1I CMGCKG 3 cut(s) 587, 866, 1114
MspI CCGG 1 cut(s) 373
MspR9I CCNGG 4 cut(s) 374, 969, 1617, 1690
Mva1269I GAATGC 2 cut(s) 500, 959
MvaI CCWGG 3 cut(s) 969, 1617, 1690
MwoI GCNNNNNNNGC 1 cut(s) 863
NciI CCSGG 1 cut(s) 374
NdeI CATATG 3 cut(s) 445, 1281, 1651
NdeII GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
NlaIV GGNNCC 6 cut(s) 287, 377, 718, 1226, 1347, 1694
NmuCI GTSAC 1 cut(s) 91
NsiI ATGCAT 2 cut(s) 151, 1498
NspV TTCGAA 1 cut(s) 1009
PagI TCATGA 1 cut(s) 1675
PceI AGGCCT 2 cut(s) 196, 809
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 2 cut(s) 500, 959
PfeI GAWTC 4 cut(s) 782, 917, 1577, 1802
PflFI GACNNNGTC 1 cut(s) 125
PflMI CCANNNNNTGG 1 cut(s) 1729
PfoI TCCNGGA 1 cut(s) 1688
PkrI GCNGC 6 cut(s) 114, 298, 865, 868, 925, 1116
PpuMI RGGWCCY 2 cut(s) 376, 1346
PshBI ATTAAT 2 cut(s) 726, 1598
PsiI TTATAA 1 cut(s) 885
Psp124BI GAGCTC 1 cut(s) 1675
Psp5II RGGWCCY 2 cut(s) 376, 1346
Psp6I CCWGG 3 cut(s) 967, 1615, 1688
PspFI CCCAGC 1 cut(s) 73
PspGI CCWGG 3 cut(s) 967, 1615, 1688
PspN4I GGNNCC 6 cut(s) 287, 377, 718, 1226, 1347, 1694
PspPI GGNCC 5 cut(s) 166, 286, 376, 1346, 1370
PspPPI RGGWCCY 2 cut(s) 376, 1346
PstNI CAGNNNCTG 2 cut(s) 353, 460
PsuI RGATCY 3 cut(s) 475, 530, 1165
PsyI GACNNNGTC 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 587
RsaI GTAC 4 cut(s) 842, 1214, 1382, 1393
RsaNI GTAC 4 cut(s) 841, 1213, 1381, 1392
RseI CAYNNNNRTG 3 cut(s) 204, 726, 1680
SacI GAGCTC 1 cut(s) 1675
SalI GTCGAC 1 cut(s) 483
SaqAI TTAA 8 cut(s) 153, 191, 333, 726, 945, 1127, 1311, 1598
SatI GCNGC 6 cut(s) 113, 297, 864, 867, 924, 1115
Sau3AI GATC 8 cut(s) 280, 475, 530, 640, 889, 997, 1165, 1276
Sau96I GGNCC 5 cut(s) 166, 286, 376, 1346, 1370
ScaI AGTACT 1 cut(s) 1393
ScrFI CCNGG 4 cut(s) 374, 969, 1617, 1690
SduI GDGCHC 7 cut(s) 624, 691, 721, 1139, 1222, 1229, 1675
SfaNI GCATC 4 cut(s) 748, 1171, 1483, 1505
SfuI TTCGAA 1 cut(s) 1009
SinI GGWCC 5 cut(s) 166, 286, 376, 1346, 1370
SmiMI CAYNNNNRTG 3 cut(s) 204, 726, 1680
SpeI ACTAGT 1 cut(s) 773
Sse9I AATT 9 cut(s) 15, 188, 435, 519, 611, 706, 1005, 1750, 1780
SseBI AGGCCT 2 cut(s) 196, 809
SsiI CCGC 5 cut(s) 289, 396, 864, 1112, 1413
SspI AATATT 1 cut(s) 1316
SspMI CTAG 7 cut(s) 266, 479, 774, 1161, 1298, 1476, 1520
SstI GAGCTC 1 cut(s) 1675
StuI AGGCCT 2 cut(s) 196, 809
StyD4I CCNGG 4 cut(s) 372, 967, 1615, 1688
StyI CCWWGG 2 cut(s) 893, 1696
TaaI ACNGT 7 cut(s) 349, 878, 950, 1212, 1217, 1224, 1309
TaiI ACGT 1 cut(s) 1192
TaqI TCGA 4 cut(s) 484, 504, 1009, 1805
TasI AATT 9 cut(s) 15, 188, 435, 519, 611, 706, 1005, 1750, 1780
TatI WGTACW 4 cut(s) 840, 1212, 1380, 1391
TauI GCSGC 1 cut(s) 866
TfiI GAWTC 4 cut(s) 782, 917, 1577, 1802
Tru1I TTAA 8 cut(s) 153, 191, 333, 726, 945, 1127, 1311, 1598
Tru9I TTAA 8 cut(s) 153, 191, 333, 726, 945, 1127, 1311, 1598
TscAI CASTG 5 cut(s) 678, 881, 1090, 1222, 1552
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 5 cut(s) 112, 296, 866, 923, 1114
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 6 cut(s) 25, 201, 573, 579, 843, 1803
TspRI CASTG 5 cut(s) 678, 881, 1090, 1222, 1552
Tth111I GACNNNGTC 1 cut(s) 125
Van91I CCANNNNNTGG 1 cut(s) 1729
VneI GTGCAC 1 cut(s) 1218
VpaK11BI GGWCC 5 cut(s) 166, 286, 376, 1346, 1370
VspI ATTAAT 2 cut(s) 726, 1598
XagI CCTNNNNNAGG 1 cut(s) 1590
XapI RAATTY 4 cut(s) 435, 519, 611, 1750
XbaI TCTAGA 1 cut(s) 1519
XmiI GTMKAC 1 cut(s) 484
XspI CTAG 7 cut(s) 266, 479, 774, 1161, 1298, 1476, 1520
ZrmI AGTACT 1 cut(s) 1393
Zsp2I ATGCAT 2 cut(s) 151, 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.