pycom16g18420
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
15018828 .. 15020292
1465 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g18420.1

Sequence Viewer

Length: 1368 bp
ATGTCGACTGACTCGACTCCAGACTCACAACACTCATCATCAAATGGTGGAGCGGGAGTACCACCATTGCATTTTTATCTAATCTTGGGAGCAGGAATGGTCTTAGTGAATATTGTTGCCTTGATTGCAGTGTGCAAGATTCGTCGGAAACGCGCAAGAGAGAGAAGTCAGAAAGTGCGCTTAGTGCAGATCGTTTCCCCGGACGATCGGACGCTCACAACGGAGAAGATCGTTACTCCAGACTTTCGGGCACTCACAATGGACAACTTTATAAATGATATGGAAAGAGAAAAGCCCGTTAGGTTCACTTCTCAACAACTTCGGATTGCGACTGATAACTTCACCAATTTGTTAGGCCGAGGAGGTTTTGGTGCAGTTTATAAAGGAATATTTAGCAATGGAACCCCAGCGGCAGTGAAGGTTCTACATGGAAGTTCGGATAAGAGTATCAATGAACAATTTATGGCGGAAGTTGGTACAATCGGAAGAATACATCACATCAATCTGGTCCGTCTTTATGGTTTCTGCTTTGAGGAACACCTCAGAGCAATTGTTTACGAGTACATGGGAAATGGATCGCTTGACAAGTACTTATTTGGTAGCAACACAGTGGTCTTAGGATTTGAACAACTTCATGAGATTGCTGTGGGGACAGCAAGAGGGATCGCTTACTTGCATGAAGACTGCCAACAACGGATTATCCATTACGACATAAAGCCTGAAAATATTCTTTTGGATGCAAAGTTCTTTCCAAAAGTAGCTGATTTCGGTTTGGCCAAGCTGTGTAACAGGGACAACACTCATATAACCATGACAAGAGGGAGGGGGACTCCGGGTTATGCTGCCCCAGAAGTTCGGCAGCGGTTCCCAATAACACACAAATGTGATGTGTTCAGCTTTGGAATGCTATTGTTTGAGATTATAGGCAGGAGAAGGAATCTTGATATCAAAGTCGAAGATAGCCGAGACTGTTTCCCGAGGTGGGTATGGAAGAAGTTTGAACCCGGAGAATTAGGAGAGCTGATGGTAGTTTGTGGAATAGAGGAGAAAGATAAGGAGAAGGCAGAGAGAATGGTAAATGTAGCTATGTGGTGTGTCCAGTATAAGCAAGAGGATAGGCCTTCAATGAGTGTTGTGGTGAAAATGTTGGAAGGAGCAATGGAGATTCCTAGACCTTCAACTAACCCTTTTCAGCACTTGATGTCGGACACTCCATACCCTGCTGCACCCGTCTATGATACGTCAAATCCAACAACTGGTACCAGCAGCGATTTTTGTTTAGTTCCTTCTCAAACTGTAAATGGATATAAAGCCGTAGATGATACTCCTATCATGAAGAAATATGAGATTGAAATAGCGTCTAACTAG

Protein Analysis

456

Amino Acids

51.2

Weight (kDa)

7.6

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 114 - 383 3.4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 116 - 381 2.4e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000690)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g07910
malus_domestica MD10G1181800.v1.1 MD10G1181900.v1.1 MD13G1249800.v1.1 MD13G1250100.v1.1 MD13G1250500.v1.1 MD13G1250700.v1.1 MD13G1250900.v1.1 MD13G1251000.v1.1 MD16G1220300.v1.1
prunus_persica Prupe.1G082900_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083000_v2.0.a1 Prupe.1G083100_v2.0.a1 Prupe.1G083300_v2.0.a1
pyrus_communis pycom16g18410 pycom16g18420 pycom16g18430
rosa_chinensis RchiOBHm_Chr4g0401211 RchiOBHm_Chr4g0401231 RchiOBHm_Chr4g0401251 RchiOBHm_Chr4g0401331 RchiOBHm_Chr4g0401351 RchiOBHm_Chr4g0401361 RchiOBHm_Chr4g0401381 RchiOBHm_Chr4g0401471 RchiOBHm_Chr4g0401481 RchiOBHm_Chr4g0401501 RchiOBHm_Chr4g0401511 RchiOBHm_Chr4g0401631 RchiOBHm_Chr4g0401651
rosa_laevigata RLG00000009145 RLG00000009146 RLG00000009148 RLG00000009149 RLG00000009151 RLG00000009154 RLG00000009155
rosa_multiflora Rmu_sc0001524.1_g000025 Rmu_sc0001524.1_g000067 Rmu_sc0003623.1_g000001 Rmu_sc0003623.1_g000027 Rmu_sc0004622.1_g000009 Rmu_sc0004622.1_g000013 Rmu_sc0004622.1_g000018 Rmu_sc0005229.1_g000007 Rmu_sc0005229.1_g000012 Rmu_sc0006444.1_g000002 Rmu_sc0006444.1_g000006 Rmu_sc0012283.1_g000002 Rmu_sc0012283.1_g000003 Rmu_sc0042918.1_g000001
rosa_roxburghii Rroxscaffold_2G00117770 Rroxscaffold_5G00346060 Rroxscaffold_5G00346100 Rroxscaffold_5G00346110 Rroxscaffold_5G00346130 Rroxscaffold_5G00360510
rosa_rugosa Rorug04G0029000 Rorug04G0029200 Rorug04G0029300 Rorug04G0029500 Rorug04G0029600 Rorug04G0030700 Rorug04G0030900
rosa_samantha Rh4AG107600 Rh4BG101300 Rh4CG115900
rosa_wichuraiana Rw4G008620 Rw4G008630 Rw4G008650 Rw4G008660 Rw4G008680 Rw4G008710 Rw4G008730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 272, 381
Acc65I GGTACC 1 cut(s) 1259
AccB1I GGYRCC 1 cut(s) 1259
AccB7I CCANNNNNTGG 1 cut(s) 1256
AccBSI CCGCTC 1 cut(s) 53
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 153
AciI CCGC 4 cut(s) 53, 410, 467, 862
AclWI GGATC 2 cut(s) 583, 671
AcoI YGGCCR 1 cut(s) 774
AfaI GTAC 5 cut(s) 60, 478, 563, 590, 1261
AfiI CCNNNNNNNGG 2 cut(s) 982, 1256
AgsI TTSAA 5 cut(s) 626, 1001, 1125, 1179, 1352
AleI CACNNNNGTG 1 cut(s) 882
AloI GAACNNNNNNTCC 2 cut(s) 728, 760
AluBI AGCT 5 cut(s) 761, 781, 897, 1021, 1085
AluI AGCT 5 cut(s) 761, 781, 897, 1021, 1085
Alw26I GTCTC 1 cut(s) 960
AlwI GGATC 2 cut(s) 583, 671
Ama87I CYCGRG 1 cut(s) 976
AoxI GGCC 3 cut(s) 355, 774, 1118
ApeKI GCWGC 4 cut(s) 842, 859, 1223, 1266
Asp700I GAANNNNTTC 2 cut(s) 630, 726
Asp718I GGTACC 1 cut(s) 1259
AspLEI GCGC 2 cut(s) 155, 180
AspS9I GGNCC 1 cut(s) 508
AsuC2I CCSGG 3 cut(s) 200, 834, 1005
AsuHPI GGTGA 2 cut(s) 334, 1150
AvaI CYCGRG 1 cut(s) 976
AvaII GGWCC 1 cut(s) 508
BaeGI GKGCMC 1 cut(s) 253
BalI TGGCCA 1 cut(s) 776
BanI GGYRCC 1 cut(s) 1259
BbsI GAAGAC 1 cut(s) 687
BbvI GCAGC 4 cut(s) 829, 871, 1210, 1278
BccI CCATC 1 cut(s) 1018
BceAI ACGGC 1 cut(s) 1298
BcnI CCSGG 3 cut(s) 200, 834, 1005
BcoDI GTCTC 1 cut(s) 960
BfaI CTAG 2 cut(s) 1170, 1366
BisI GCNGC 5 cut(s) 411, 843, 860, 1224, 1267
BlsI GCNGC 5 cut(s) 412, 844, 861, 1225, 1268
BmcAI AGTACT 1 cut(s) 590
Bme1390I CCNGG 3 cut(s) 200, 834, 1005
Bme18I GGWCC 1 cut(s) 508
BmeT110I CYCGRG 1 cut(s) 976
BmgT120I GGNCC 1 cut(s) 508
BmiI GGNNCC 3 cut(s) 403, 866, 1261
BmrFI CCNGG 3 cut(s) 200, 834, 1005
BmsI GCATC 1 cut(s) 727
BpiI GAAGAC 1 cut(s) 687
BplI GAGNNNNNCTC 2 cut(s) 814, 846
BpmI CTGGAG 1 cut(s) 222
BpuMI CCSGG 3 cut(s) 200, 834, 1005
BsaJI CCNNGG 3 cut(s) 198, 358, 977
BsaXI ACNNNNNCTCC 2 cut(s) 42, 72
Bsc4I CCNNNNNNNGG 2 cut(s) 982, 1256
Bse1I ACTGG 2 cut(s) 1099, 1261
Bse3DI GCAATG 3 cut(s) 65, 403, 1164
BseDI CCNNGG 3 cut(s) 198, 358, 977
BseGI GGATG 1 cut(s) 742
BseLI CCNNNNNNNGG 2 cut(s) 982, 1256
BseMI GCAATG 3 cut(s) 65, 403, 1164
BseMII CTCAG 1 cut(s) 556
BseNI ACTGG 2 cut(s) 1099, 1261
BseRI GAGGAG 2 cut(s) 375, 1058
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 4 cut(s) 829, 871, 1210, 1278
BseYI CCCAGC 1 cut(s) 406
BsgI GTGCAG 3 cut(s) 206, 393, 1209
Bsh1236I CGCG 1 cut(s) 153
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 3 cut(s) 357, 776, 1120
BshNI GGYRCC 1 cut(s) 1259
BsiEI CGRYCG 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 976
BsiSI CCGG 3 cut(s) 200, 833, 1005
BslFI GGGAC 3 cut(s) 664, 806, 841
BslI CCNNNNNNNGG 2 cut(s) 982, 1256
BsmAI GTCTC 1 cut(s) 960
BsmFI GGGAC 3 cut(s) 664, 806, 841
BsmI GAATGC 1 cut(s) 909
BsnI GGCC 3 cut(s) 357, 776, 1120
BsoBI CYCGRG 1 cut(s) 976
Bsp1286I GDGCHC 1 cut(s) 253
Bsp143I GATC 5 cut(s) 189, 205, 228, 575, 663
BspACI CCGC 4 cut(s) 53, 410, 467, 862
BspANI GGCC 3 cut(s) 357, 776, 1120
BspCNI CTCAG 1 cut(s) 555
BspFNI CGCG 1 cut(s) 153
BspHI TCATGA 2 cut(s) 634, 1332
BspLI GGNNCC 3 cut(s) 403, 866, 1261
BspPI GGATC 2 cut(s) 583, 671
BspT107I GGYRCC 1 cut(s) 1259
BsrBI CCGCTC 1 cut(s) 53
BsrDI GCAATG 3 cut(s) 65, 403, 1164
BsrI ACTGG 2 cut(s) 1099, 1261
BssECI CCNNGG 3 cut(s) 198, 358, 977
BssMI GATC 5 cut(s) 189, 205, 228, 575, 663
Bst4CI ACNGT 3 cut(s) 610, 971, 1297
BstDEI CTNAG 4 cut(s) 103, 181, 542, 616
BstF5I GGATG 1 cut(s) 742
BstFNI CGCG 1 cut(s) 153
BstHHI GCGC 2 cut(s) 155, 180
BstKTI GATC 5 cut(s) 192, 208, 231, 578, 666
BstMAI GTCTC 1 cut(s) 960
BstMBI GATC 5 cut(s) 189, 205, 228, 575, 663
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 2 cut(s) 125, 184
BstSCI CCNGG 3 cut(s) 198, 832, 1003
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 1 cut(s) 153
BstV1I GCAGC 4 cut(s) 829, 871, 1210, 1278
BstV2I GAAGAC 1 cut(s) 687
BsuRI GGCC 3 cut(s) 357, 776, 1120
BtsCI GGATG 1 cut(s) 742
BtsI GCAGTG 2 cut(s) 135, 420
BtsIMutI CAGTG 3 cut(s) 135, 420, 615
CciI TCATGA 2 cut(s) 634, 1332
CfoI GCGC 2 cut(s) 155, 180
Cfr13I GGNCC 1 cut(s) 508
CseI GACGC 2 cut(s) 220, 1347
Csp6I GTAC 5 cut(s) 59, 477, 562, 589, 1260
CviAII CATG 6 cut(s) 428, 565, 635, 677, 811, 1333
CviQI GTAC 5 cut(s) 59, 477, 562, 589, 1260
DdeI CTNAG 4 cut(s) 103, 181, 542, 616
DpnI GATC 5 cut(s) 191, 207, 230, 577, 665
DpnII GATC 5 cut(s) 189, 205, 228, 575, 663
EaeI YGGCCR 1 cut(s) 774
EciI GGCGGA 1 cut(s) 482
Eco147I AGGCCT 1 cut(s) 1120
Eco32I GATATC 1 cut(s) 946
Eco47I GGWCC 1 cut(s) 508
Eco88I CYCGRG 1 cut(s) 976
EcoRV GATATC 1 cut(s) 946
FaeI CATG 6 cut(s) 431, 568, 638, 680, 814, 1336
FaqI GGGAC 3 cut(s) 664, 806, 841
FatI CATG 6 cut(s) 427, 564, 634, 676, 810, 1332
FauI CCCGC 1 cut(s) 46
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 5 cut(s) 411, 843, 860, 1224, 1267
FokI GGATG 1 cut(s) 749
Fsp4HI GCNGC 5 cut(s) 411, 843, 860, 1224, 1267
FspBI CTAG 2 cut(s) 1170, 1366
GlaI GCGC 2 cut(s) 154, 179
GluI GCNGC 5 cut(s) 411, 843, 860, 1224, 1267
GsaI CCCAGC 1 cut(s) 410
GsuI CTGGAG 1 cut(s) 222
HaeIII GGCC 3 cut(s) 357, 776, 1120
HapII CCGG 3 cut(s) 200, 833, 1005
HgaI GACGC 2 cut(s) 220, 1347
HhaI GCGC 2 cut(s) 155, 180
Hin1II CATG 6 cut(s) 431, 568, 638, 680, 814, 1336
Hin6I GCGC 2 cut(s) 153, 178
HinP1I GCGC 2 cut(s) 153, 178
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 7 cut(s) 11, 16, 23, 139, 829, 937, 1165
HpaII CCGG 3 cut(s) 200, 833, 1005
HphI GGTGA 2 cut(s) 334, 1150
Hpy166II GTNNAC 3 cut(s) 6, 306, 556
Hpy188I TCNGA 8 cut(s) 147, 171, 210, 324, 439, 485, 545, 1207
Hpy188III TCNNGA 6 cut(s) 20, 239, 635, 941, 976, 1333
Hpy8I GTNNAC 3 cut(s) 6, 306, 556
Hpy99I CGWCG 1 cut(s) 147
HpyAV CCTTC 7 cut(s) 412, 927, 1054, 1131, 1145, 1185, 1296
HpyCH4III ACNGT 3 cut(s) 610, 971, 1297
HpyCH4IV ACGT 1 cut(s) 1241
HpyCH4V TGCA 8 cut(s) 70, 128, 135, 187, 374, 676, 740, 1226
HpyF10VI GCNNNNNNNGC 2 cut(s) 125, 184
HpyF3I CTNAG 4 cut(s) 103, 181, 542, 616
HpySE526I ACGT 1 cut(s) 1241
Hsp92II CATG 6 cut(s) 431, 568, 638, 680, 814, 1336
HspAI GCGC 2 cut(s) 153, 178
KpnI GGTACC 1 cut(s) 1263
Kzo9I GATC 5 cut(s) 189, 205, 228, 575, 663
LmnI GCTCC 3 cut(s) 50, 89, 1154
Lsp1109I GCAGC 4 cut(s) 829, 871, 1210, 1278
LweI GCATC 1 cut(s) 727
MaeI CTAG 2 cut(s) 1170, 1366
MaeII ACGT 1 cut(s) 1241
MaeIII GTNAC 2 cut(s) 232, 785
MalI GATC 5 cut(s) 191, 207, 230, 577, 665
MbiI CCGCTC 1 cut(s) 53
MboI GATC 5 cut(s) 189, 205, 228, 575, 663
MboII GAAGA 6 cut(s) 238, 498, 692, 968, 1003, 1348
MfeI CAATTG 1 cut(s) 549
MhlI GDGCHC 1 cut(s) 253
MlsI TGGCCA 1 cut(s) 776
MluCI AATT 4 cut(s) 346, 458, 549, 1010
MluNI TGGCCA 1 cut(s) 776
MlyI GAGTC 4 cut(s) 5, 10, 17, 823
MmeI TCCRAC 4 cut(s) 125, 1128, 1185, 1274
Mox20I TGGCCA 1 cut(s) 776
MroXI GAANNNNTTC 2 cut(s) 630, 726
MscI TGGCCA 1 cut(s) 776
MslI CAYNNNNRTG 2 cut(s) 880, 882
Msp20I TGGCCA 1 cut(s) 776
MspA1I CMGCKG 2 cut(s) 410, 862
MspI CCGG 3 cut(s) 200, 833, 1005
MspR9I CCNGG 3 cut(s) 200, 834, 1005
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 1 cut(s) 909
MvnI CGCG 1 cut(s) 153
MwoI GCNNNNNNNGC 2 cut(s) 125, 184
NciI CCSGG 3 cut(s) 200, 834, 1005
NdeII GATC 5 cut(s) 189, 205, 228, 575, 663
NlaIII CATG 6 cut(s) 431, 568, 638, 680, 814, 1336
NlaIV GGNNCC 3 cut(s) 403, 866, 1261
NmeAIII GCCGAG 2 cut(s) 383, 989
OliI CACNNNNGTG 1 cut(s) 882
PagI TCATGA 2 cut(s) 634, 1332
PceI AGGCCT 1 cut(s) 1120
PcsI WCGNNNNNNNCGW 1 cut(s) 11
PctI GAATGC 1 cut(s) 909
PdmI GAANNNNTTC 2 cut(s) 630, 726
PfeI GAWTC 3 cut(s) 139, 937, 1165
PflMI CCANNNNNTGG 1 cut(s) 1256
PkrI GCNGC 5 cut(s) 412, 844, 861, 1225, 1268
Ple19I CGATCG 1 cut(s) 208
PleI GAGTC 4 cut(s) 5, 10, 17, 823
PpsI GAGTC 4 cut(s) 5, 10, 17, 823
PsiI TTATAA 2 cut(s) 272, 381
PspFI CCCAGC 1 cut(s) 406
PspN4I GGNNCC 3 cut(s) 403, 866, 1261
PspPI GGNCC 1 cut(s) 508
PvuI CGATCG 1 cut(s) 208
RsaI GTAC 5 cut(s) 60, 478, 563, 590, 1261
RsaNI GTAC 5 cut(s) 59, 477, 562, 589, 1260
RseI CAYNNNNRTG 2 cut(s) 880, 882
SalI GTCGAC 1 cut(s) 4
SatI GCNGC 5 cut(s) 411, 843, 860, 1224, 1267
Sau3AI GATC 5 cut(s) 189, 205, 228, 575, 663
Sau96I GGNCC 1 cut(s) 508
ScaI AGTACT 1 cut(s) 590
SchI GAGTC 4 cut(s) 5, 10, 17, 823
ScrFI CCNGG 3 cut(s) 200, 834, 1005
SduI GDGCHC 1 cut(s) 253
SfaNI GCATC 1 cut(s) 727
SinI GGWCC 1 cut(s) 508
SmiMI CAYNNNNRTG 2 cut(s) 880, 882
Sse9I AATT 4 cut(s) 346, 458, 549, 1010
SseBI AGGCCT 1 cut(s) 1120
SsiI CCGC 4 cut(s) 53, 410, 467, 862
SspI AATATT 3 cut(s) 112, 390, 727
SspMI CTAG 2 cut(s) 1170, 1366
StuI AGGCCT 1 cut(s) 1120
StyD4I CCNGG 3 cut(s) 198, 832, 1003
TaaI ACNGT 3 cut(s) 610, 971, 1297
TaiI ACGT 1 cut(s) 1244
TaqI TCGA 3 cut(s) 5, 14, 954
TasI AATT 4 cut(s) 346, 458, 549, 1010
TatI WGTACW 2 cut(s) 561, 588
TauI GCSGC 1 cut(s) 413
TfiI GAWTC 3 cut(s) 139, 937, 1165
TscAI CASTG 3 cut(s) 135, 420, 615
TseI GCWGC 4 cut(s) 842, 859, 1223, 1266
TspDTI ATGAA 4 cut(s) 468, 623, 693, 1349
TspGWI ACGGA 3 cut(s) 236, 500, 709
TspRI CASTG 3 cut(s) 135, 420, 615
Van91I CCANNNNNTGG 1 cut(s) 1256
VpaK11BI GGWCC 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 2 cut(s) 630, 726
XspI CTAG 2 cut(s) 1170, 1366
ZrmI AGTACT 1 cut(s) 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.