Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0000333

Physical Location & Seq

Genomic Coordinates Reverse (-)

5506560 .. 5511236

Gene Structure 4677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1048500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGCACAATGCGGAGCTAAAGTTGTTTTTGGAAGTAGAGTTTGGACCGATTCTACGTCCTATTTCTCTGCCTAACAAAACCGAGGAAGATATCCTGCTTTTTTTTAAGCTTTATGAACCTGAGAAACAAGAACTACGTTTTGTTGGCAGGCTTTTTGTGAAGAGTTTTACTAAGCCAGTGGAGATTTTAGCAAAGTTCAATCAACTTGCTGGTTTTTCCCTTGATGAAGAAATTGAAATTTATGAGGAAATAAGGTTTAAGCCTTCTGTCATGTGCCAACGCCTTGACAAGATGACCTCATTTCAGTCGAGCCAGATTGAAGATGGGGACATTATATGCTTTCAGAAATCTACTCCGCTTGAAATTGACGAAGGATGTAAATACCCTGATGTTCCTTCATTTTTGGACTATGTGCACAATCGCCGGATTGTTCATTTCCATTCTTTGGAGAAACCGACGGTGGAGGATTTTTGTTTAGAATTGTCAAAGCTACACACTTATGATGATGTGGTGGAAAAATTAGCTCACCACATTGGTTTGGAGGATCCTACCAAAATCAGACTCACTGCACATAACTGCTATTCTCAACAACCTAGGGCCCAACCCATCAAATATCGGGGAGTAGAGCATTTAACAGAAATGTTAACTCATTACAATCAAACCTCTGATATTTTGTACTATGAAGTCTTTGAAATTACCCTGCCAGAATTGCAAGATCTGAAACATCTAAAAGTTGCTTTTCATCATGCTACAAAAGATGAGGTGGAGATTCACAGTATTAGATTGCCTAAACAGAGCATTGTTGGGGATGTGATTAATGTACTTAAAACGAAGGTAGAGTTGTCTCATCCAAATGCAGAACTGCGACTGCTTGAGGTTTTCGATCACAAGATCTACAAGATCTTCCCAAACAGTGAGAAAATTGAGAATATTAATAACCAGTACTGGACTTTGCGTGCAGAGGAGATTCCAGAAGAAGAGAAAAACTTGGGTCTCTATCGTCGCTTGATTCATGTTTTCCACTTCACGGTTACTGTATTGAACCAGATGGTAGATCAAGTACAAAATTTTGGGGAACCTTTCGTATTGGTTATCCATGAAGGGGAAACTTTAGCTGAAGTTAAAATAAGGATACAAAAGAAATTGCAAGTCCCGGATGAGGAGTTCTCAAAGTGGAAGTTTGCATTCTTGTCACTTGGTCGTCCAGAGTACCTGCGGGATTCTGACATTGTTTCCAGCCGATTTCAGAGAAGAGATGTTTATGGTGCATGGGAGCAGTACCTTGGGTTGGAGCACTCTGATAAAGCTCCTAAGAGGGCTCACGCAGCAAATCAAGCTGCCCAAGTAACCTTAGAGTCCATGGCGTCTAATGTTGGCCATGAGACAGCAAGCAGAGAAATTGAAATGCAAAATGATGACCTGGATGGCCCTGCTTCTCCAGCAGTTGATCGAACTCTGAGAAGACTTTCTGCTGCAGAGGATCTATTGAAGTCCACTTCAGCCAGAGGACCATCAGTAGAGACTTTGGCTGCATTAGACACTGTGAGCCGTTATGCAAGGAGCAGCCTAGACACACTCTGCACGAATGGGGCTTATGAGGAGTTCAAAGCAGCCTTGAAACTTGTGACTGAACAAGGGATGATCCCTTCAACGATCACTTCCATGTTCAAGGATCTTCTTTCGTCTTTGGATGGTGAAATGCTGAAGTACGTGGCCGCAGTAAAAGAGCTTACCCAAGCTGAAGATTTTCGAGTCGAACACGAAGGGATAGAAGTTCAAATGGGACTGGCCATGCAGAAATGCCAAGAGAGGAAATACATTGTGGCCAATTATGATGCCAAGGTTACAGAACTTGAGGCTGAACTGGTCCGAGTAAAGGCAGAACGAGCTGAGGCAATGGCGAATCTAGAAACTGCTGTGGATGAAATGGAACCTCTTAAGCAGAGGTTTGCAGATAGCTCATTAAAATCTGAAAACTTGATTGTGAGGCAGGCTACCTTGACATTGCAAAAGTGTAGTTCTGTTGGAACCTGGGCCGTCCTACAAGATGCACTGAAGAAGTACTTTAAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04068 ko05168 ko05169 ko05203 map04068 map05168 map05169 map05203

Pfam Domains

Protein Families

MATH UCH USP7_C2 USP7_ICP0_bdg

Protein Analysis

692

Amino Acids

79.45

Weight (kDa)

5.44

Isoelectric Point (pI)

41.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP7_ICP0_bdg	PF12436	3 - 215	9.6e-58	ICP0-binding domain of Ubiquitin-specific protease 7
USP7_C2	PF14533	225 - 437	3.2e-53	Ubiquitin-specific protease C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11910 AT3G11910 AT3G11910 AT3G11910 AT5G06600 AT5G06600 AT5G06600
fragaria_vesca	FvH4_3g26930 FvH4_3g39132 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220
malus_domestica	MD02G1261100.v1.1 MD03G1161100.v1.1 MD07G1059900.v1.1 MD11G1177100.v1.1 MD12G1047900.v1.1 MD12G1048000.v1.1 MD12G1048400.v1.1 MD12G1048500.v1.1 MD12G1048700.v1.1 MD12G1048800.v1.1 MD12G1056200.v1.1 MD14G1046300.v1.1 MD14G1046500.v1.1 MD15G1166900.v1.1
prunus_persica	Prupe.2G066200_v2.0.a1 Prupe.2G066200_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1
pyrus_communis	pycom02g22320 pycom03g11340 pycom07g04580 pycom11g14290 pycom11g15110 pycom12g04110 pycom12g04140 pycom12g04160 pycom12g04210 pycom12g04220 pycom12g04230 pycom12g04290 pycom12g04320 pycom12g04330 pycom12g04350 pycom12g04360 pycom14g03880 pycom14g03900 pycom16g18750
rosa_chinensis	RchiOBHm_Chr1g0324111 RchiOBHm_Chr1g0324241 RchiOBHm_Chr3g0477691 RchiOBHm_Chr5g0049371 RchiOBHm_Chr5g0070531
rosa_laevigata	RLG00000008612 RLG00000023698 RLG00000034613 RLG00000036139
rosa_multiflora	Rmu_co8271779.1_g000001 Rmu_sc0006187.1_g000014
rosa_roxburghii	Rroxscaffold_1G00010670 Rroxscaffold_1G00030450 Rroxscaffold_1G00031950 Rroxscaffold_1G00031970 Rroxscaffold_1G00032320 Rroxscaffold_1G00055490 Rroxscaffold_2G00083610 Rroxscaffold_2G00084480 Rroxscaffold_2G00115610 Rroxscaffold_3G00261320 Rroxscaffold_4G00312220 Rroxscaffold_4G00325820 Rroxscaffold_5G00339170 Rroxscaffold_5G00364030 Rroxscaffold_6G00403750
rosa_rugosa	Rorug03G0162700 Rorug03G0162800 Rorug03G0162900 Rorug05G0247700 Rorug05G0406600 Rorug05G0406800
rosa_samantha	Rh1AG060300 Rh3AG213000 Rh3BG246600 Rh3CG240400 Rh3DG239700 Rh5AG324400 Rh5AG462100 Rh5BG335500 Rh5BG480200 Rh5BG480300 Rh5CG360200 Rh5CG504500 Rh5CG504600 Rh5DG347800 Rh5DG492200 Rh5DG492300
rosa_wichuraiana	Rw3G019270 Rw3G026910 Rw5G030650 Rw5G032610 Rw5G043040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1221
AccB7I	CCANNNNNTGG	1 cut(s)	445
AciI	CCGC	4 cut(s)	11, 356, 1216, 1716
AclWI	GGATC	5 cut(s)	539, 552, 1488, 1636, 1680
AcoI	YGGCCR	4 cut(s)	1375, 1713, 1788, 1824
AcsI	RAATTY	2 cut(s)	237, 1066
AcuI	CTGAAG	5 cut(s)	1137, 1482, 1724, 1761, 2075
AcyI	GRCGYC	1 cut(s)	1364
AfaI	GTAC	8 cut(s)	677, 822, 944, 1062, 1211, 1280, 1709, 2063
AfiI	CCNNNNNNNGG	6 cut(s)	445, 1027, 1102, 1159, 1288, 1876
AflII	CTTAAG	1 cut(s)	1937
AjnI	CCWGG	2 cut(s)	1419, 2030
AjuI	GAANNNNNNNTTGG	2 cut(s)	24, 56
AloI	GAACNNNNNNTCC	2 cut(s)	1148, 1180
Alw21I	GWGCWC	2 cut(s)	417, 1296
Alw26I	GTCTC	4 cut(s)	849, 998, 1376, 1514
Alw44I	GTGCAC	1 cut(s)	413
AlwI	GGATC	5 cut(s)	539, 552, 1488, 1636, 1680
AoxI	GGCC	7 cut(s)	597, 1375, 1426, 1713, 1788, 1824, 2034
ApaI	GGGCCC	1 cut(s)	601
ApaLI	GTGCAC	1 cut(s)	413
ApeKI	GCWGC	6 cut(s)	1325, 1337, 1472, 1529, 1563, 1610
ApoI	RAATTY	2 cut(s)	237, 1066
AseI	ATTAAT	2 cut(s)	816, 933
Asp700I	GAANNNNTTC	2 cut(s)	1465, 1746
AspA2I	CCTAGG	1 cut(s)	593
AspS9I	GGNCC	7 cut(s)	44, 597, 598, 1427, 1508, 1867, 2034
AsuC2I	CCSGG	1 cut(s)	1154
AsuHPI	GGTGA	2 cut(s)	518, 1706
AvaII	GGWCC	3 cut(s)	44, 1508, 1867
AvrII	CCTAGG	1 cut(s)	593
BaeGI	GKGCMC	2 cut(s)	417, 601
BalI	TGGCCA	3 cut(s)	1377, 1790, 1826
BamHI	GGATCC	1 cut(s)	544
BanII	GRGCYC	2 cut(s)	601, 1321
BbsI	GAAGAC	1 cut(s)	1468
Bbv12I	GWGCWC	2 cut(s)	417, 1296
BbvCI	CCTCAGC	1 cut(s)	1890
BbvI	GCAGC	6 cut(s)	1324, 1337, 1459, 1516, 1575, 1622
BccI	CCATC	6 cut(s)	317, 614, 1042, 1418, 1519, 1685
BceAI	ACGGC	2 cut(s)	1533, 2021
BciT130I	CCWGG	2 cut(s)	1421, 2032
BciVI	GTATCC	1 cut(s)	1125
BcnI	CCSGG	1 cut(s)	1154
BcoDI	GTCTC	4 cut(s)	849, 998, 1376, 1514
BfaI	CTAG	3 cut(s)	594, 1568, 1907
BfmI	CTRYAG	1 cut(s)	1473
BfrI	CTTAAG	1 cut(s)	1937
BfuAI	ACCTGC	1 cut(s)	1221
BfuI	GTATCC	1 cut(s)	1125
BglII	AGATCT	3 cut(s)	715, 891, 900
BisI	GCNGC	7 cut(s)	1326, 1338, 1473, 1530, 1564, 1611, 1716
BlnI	CCTAGG	1 cut(s)	593
BlsI	GCNGC	7 cut(s)	1327, 1339, 1474, 1531, 1565, 1612, 1717
BmcAI	AGTACT	2 cut(s)	944, 2063
Bme1390I	CCNGG	3 cut(s)	1154, 1421, 2032
Bme18I	GGWCC	3 cut(s)	44, 1508, 1867
BmgT120I	GGNCC	7 cut(s)	44, 597, 598, 1427, 1508, 1867, 2034
BmiI	GGNNCC	5 cut(s)	546, 599, 1077, 1932, 2029
BmrFI	CCNGG	3 cut(s)	1154, 1421, 2032
BmsI	GCATC	2 cut(s)	1825, 2038
BpiI	GAAGAC	1 cut(s)	1468
BplI	GAGNNNNNCTC	2 cut(s)	1151, 1183
BpmI	CTGGAG	1 cut(s)	1422
Bpu10I	CCTNAGC	1 cut(s)	1890
BpuEI	CTTGAG	2 cut(s)	893, 1874
BpuMI	CCSGG	1 cut(s)	1154
BsaAI	YACGTR	1 cut(s)	1711
BsaHI	GRCGYC	1 cut(s)	1364
BsaI	GGTCTC	1 cut(s)	998
BsaJI	CCNNGG	6 cut(s)	81, 593, 1282, 1359, 1839, 2031
BsaXI	ACNNNNNCTCC	2 cut(s)	5, 35
Bsc4I	CCNNNNNNNGG	6 cut(s)	445, 1027, 1102, 1159, 1288, 1876
Bse1I	ACTGG	5 cut(s)	176, 940, 950, 1791, 1869
Bse3DI	GCAATG	2 cut(s)	1902, 2003
BseBI	CCWGG	2 cut(s)	1421, 2032
BseDI	CCNNGG	6 cut(s)	81, 593, 1282, 1359, 1839, 2031
BseGI	GGATG	8 cut(s)	380, 814, 847, 1162, 1429, 1644, 1696, 1927
BseLI	CCNNNNNNNGG	6 cut(s)	445, 1027, 1102, 1159, 1288, 1876
BseMI	GCAATG	2 cut(s)	1902, 2003
BseMII	CTCAG	3 cut(s)	111, 1448, 1881
BseNI	ACTGG	5 cut(s)	176, 940, 950, 1791, 1869
BseRI	GAGGAG	3 cut(s)	977, 1175, 1613
BseSI	GKGCMC	2 cut(s)	417, 601
BseXI	GCAGC	6 cut(s)	1324, 1337, 1459, 1516, 1575, 1622
BsgI	GTGCAG	3 cut(s)	552, 978, 1564
BshFI	GGCC	7 cut(s)	599, 1377, 1428, 1715, 1790, 1826, 2036
BsiHKAI	GWGCWC	2 cut(s)	417, 1296
BsiSI	CCGG	2 cut(s)	424, 1154
BslFI	GGGAC	3 cut(s)	341, 1136, 1797
BslI	CCNNNNNNNGG	6 cut(s)	445, 1027, 1102, 1159, 1288, 1876
BsmAI	GTCTC	4 cut(s)	849, 998, 1376, 1514
BsmFI	GGGAC	3 cut(s)	341, 1136, 1797
BsmI	GAATGC	1 cut(s)	1184
BsnI	GGCC	7 cut(s)	599, 1377, 1428, 1715, 1790, 1826, 2036
Bso31I	GGTCTC	1 cut(s)	998
Bsp120I	GGGCCC	1 cut(s)	597
Bsp1286I	GDGCHC	4 cut(s)	417, 601, 1296, 1321
Bsp19I	CCATGG	1 cut(s)	1359
BspACI	CCGC	4 cut(s)	11, 356, 1216, 1716
BspANI	GGCC	7 cut(s)	599, 1377, 1428, 1715, 1790, 1826, 2036
BspCNI	CTCAG	3 cut(s)	112, 1449, 1882
BspLI	GGNNCC	5 cut(s)	546, 599, 1077, 1932, 2029
BspMAI	CTGCAG	1 cut(s)	1477
BspMI	ACCTGC	1 cut(s)	1221
BspPI	GGATC	5 cut(s)	539, 552, 1488, 1636, 1680
BspTI	CTTAAG	1 cut(s)	1937
BspTNI	GGTCTC	1 cut(s)	998
BsrDI	GCAATG	2 cut(s)	1902, 2003
BsrI	ACTGG	5 cut(s)	176, 940, 950, 1791, 1869
BssECI	CCNNGG	6 cut(s)	81, 593, 1282, 1359, 1839, 2031
BssNI	GRCGYC	1 cut(s)	1364
BssT1I	CCWWGG	4 cut(s)	593, 1282, 1359, 1839
Bst2UI	CCWGG	2 cut(s)	1421, 2032
Bst4CI	ACNGT	6 cut(s)	460, 776, 914, 1030, 1036, 1543
Bst6I	CTCTTC	3 cut(s)	155, 972, 1246
BstACI	GRCGYC	1 cut(s)	1364
BstAFI	CTTAAG	1 cut(s)	1937
BstBAI	YACGTR	1 cut(s)	1711
BstC8I	GCNNGC	4 cut(s)	149, 957, 1390, 1992
BstDEI	CTNAG	6 cut(s)	120, 171, 1311, 1351, 1457, 1890
BstDSI	CCRYGG	1 cut(s)	1359
BstF5I	GGATG	8 cut(s)	380, 814, 847, 1162, 1429, 1644, 1696, 1927
BstMAI	GTCTC	4 cut(s)	849, 998, 1376, 1514
BstMWI	GCNNNNNNNGC	5 cut(s)	709, 1325, 1334, 1439, 1886
BstNI	CCWGG	2 cut(s)	1421, 2032
BstSCI	CCNGG	3 cut(s)	1152, 1419, 2030
BstSFI	CTRYAG	1 cut(s)	1473
BstSLI	GKGCMC	2 cut(s)	417, 601
BstV1I	GCAGC	6 cut(s)	1324, 1337, 1459, 1516, 1575, 1622
BstV2I	GAAGAC	1 cut(s)	1468
BstX2I	RGATCY	6 cut(s)	544, 715, 891, 900, 1480, 1672
BstYI	RGATCY	6 cut(s)	544, 715, 891, 900, 1480, 1672
BsuI	GTATCC	1 cut(s)	1125
BsuRI	GGCC	7 cut(s)	599, 1377, 1428, 1715, 1790, 1826, 2036
BtgI	CCRYGG	1 cut(s)	1359
BtsCI	GGATG	8 cut(s)	380, 814, 847, 1162, 1429, 1644, 1696, 1927
BtsI	GCAGTG	1 cut(s)	564
BtsIMutI	CAGTG	5 cut(s)	183, 564, 919, 1539, 2051
BveI	ACCTGC	1 cut(s)	1221
Cac8I	GCNNGC	4 cut(s)	149, 957, 1390, 1992
Cfr13I	GGNCC	7 cut(s)	44, 597, 598, 1427, 1508, 1867, 2034
CseI	GACGC	1 cut(s)	1353
Csp6I	GTAC	8 cut(s)	676, 821, 943, 1061, 1210, 1279, 1708, 2062
CviAII	CATG	9 cut(s)	271, 746, 1013, 1097, 1269, 1360, 1379, 1663, 1792
CviQI	GTAC	8 cut(s)	676, 821, 943, 1061, 1210, 1279, 1708, 2062
DdeI	CTNAG	6 cut(s)	120, 171, 1311, 1351, 1457, 1890
EaeI	YGGCCR	4 cut(s)	1375, 1713, 1788, 1824
Eam1104I	CTCTTC	3 cut(s)	155, 972, 1246
EarI	CTCTTC	3 cut(s)	155, 972, 1246
Eco130I	CCWWGG	4 cut(s)	593, 1282, 1359, 1839
Eco24I	GRGCYC	2 cut(s)	601, 1321
Eco31I	GGTCTC	1 cut(s)	998
Eco32I	GATATC	1 cut(s)	91
Eco47I	GGWCC	3 cut(s)	44, 1508, 1867
Eco57I	CTGAAG	5 cut(s)	1137, 1482, 1724, 1761, 2075
EcoO109I	RGGNCCY	1 cut(s)	597
EcoRII	CCWGG	2 cut(s)	1419, 2030
EcoRV	GATATC	1 cut(s)	91
EcoT14I	CCWWGG	4 cut(s)	593, 1282, 1359, 1839
EcoT38I	GRGCYC	2 cut(s)	601, 1321
ErhI	CCWWGG	4 cut(s)	593, 1282, 1359, 1839
FaeI	CATG	9 cut(s)	274, 749, 1016, 1100, 1272, 1363, 1382, 1666, 1795
FalI	AAGNNNNNCTT	1 cut(s)	2048
FaqI	GGGAC	3 cut(s)	341, 1136, 1797
FatI	CATG	9 cut(s)	270, 745, 1012, 1096, 1268, 1359, 1378, 1662, 1791
FauI	CCCGC	1 cut(s)	1209
Fnu4HI	GCNGC	7 cut(s)	1326, 1338, 1473, 1530, 1564, 1611, 1716
FokI	GGATG	8 cut(s)	387, 821, 834, 1169, 1436, 1651, 1703, 1934
FriOI	GRGCYC	2 cut(s)	601, 1321
Fsp4HI	GCNGC	7 cut(s)	1326, 1338, 1473, 1530, 1564, 1611, 1716
FspBI	CTAG	3 cut(s)	594, 1568, 1907
GluI	GCNGC	7 cut(s)	1326, 1338, 1473, 1530, 1564, 1611, 1716
GsuI	CTGGAG	1 cut(s)	1422
HaeIII	GGCC	7 cut(s)	599, 1377, 1428, 1715, 1790, 1826, 2036
HapII	CCGG	2 cut(s)	424, 1154
HgaI	GACGC	1 cut(s)	1353
Hin1I	GRCGYC	1 cut(s)	1364
Hin1II	CATG	9 cut(s)	274, 749, 1016, 1100, 1272, 1363, 1382, 1666, 1795
HincII	GTYRAC	1 cut(s)	645
HindII	GTYRAC	1 cut(s)	645
HindIII	AAGCTT	1 cut(s)	107
HinfI	GANTC	9 cut(s)	49, 561, 769, 967, 1009, 1220, 1355, 1752, 1903
HpaI	GTTAAC	1 cut(s)	645
HpaII	CCGG	2 cut(s)	424, 1154
HphI	GGTGA	2 cut(s)	518, 1706
Hpy166II	GTNNAC	3 cut(s)	415, 645, 1494
Hpy188III	TCNNGA	3 cut(s)	971, 1205, 1907
Hpy8I	GTNNAC	3 cut(s)	415, 645, 1494
Hpy99I	CGWCG	2 cut(s)	460, 1005
HpyAV	CCTTC	7 cut(s)	273, 365, 405, 826, 1094, 1656, 1757
HpyCH4III	ACNGT	6 cut(s)	460, 776, 914, 1030, 1036, 1543
HpyCH4IV	ACGT	3 cut(s)	55, 136, 1710
HpyF10VI	GCNNNNNNNGC	5 cut(s)	709, 1325, 1334, 1439, 1886
HpyF3I	CTNAG	6 cut(s)	120, 171, 1311, 1351, 1457, 1890
HpySE526I	ACGT	3 cut(s)	55, 136, 1710
Hsp92I	GRCGYC	1 cut(s)	1364
Hsp92II	CATG	9 cut(s)	274, 749, 1016, 1100, 1272, 1363, 1382, 1666, 1795
KspAI	GTTAAC	1 cut(s)	645
LmnI	GCTCC	5 cut(s)	13, 1273, 1291, 1312, 1560
Lsp1109I	GCAGC	6 cut(s)	1324, 1337, 1459, 1516, 1575, 1622
LweI	GCATC	2 cut(s)	1825, 2038
MaeI	CTAG	3 cut(s)	594, 1568, 1907
MaeII	ACGT	3 cut(s)	55, 136, 1710
MaeIII	GTNAC	5 cut(s)	1030, 1191, 1345, 1624, 1843
MflI	RGATCY	6 cut(s)	544, 715, 891, 900, 1480, 1672
MhlI	GDGCHC	4 cut(s)	417, 601, 1296, 1321
MlsI	TGGCCA	3 cut(s)	1377, 1790, 1826
MluNI	TGGCCA	3 cut(s)	1377, 1790, 1826
MlyI	GAGTC	3 cut(s)	555, 1364, 1761
MmeI	TCCRAC	2 cut(s)	1269, 2005
Mox20I	TGGCCA	3 cut(s)	1377, 1790, 1826
MroXI	GAANNNNTTC	2 cut(s)	1465, 1746
MscI	TGGCCA	3 cut(s)	1377, 1790, 1826
MslI	CAYNNNNRTG	3 cut(s)	498, 852, 1661
Msp20I	TGGCCA	3 cut(s)	1377, 1790, 1826
MspCI	CTTAAG	1 cut(s)	1937
MspI	CCGG	2 cut(s)	424, 1154
MspR9I	CCNGG	3 cut(s)	1154, 1421, 2032
Mva1269I	GAATGC	1 cut(s)	1184
MvaI	CCWGG	2 cut(s)	1421, 2032
MwoI	GCNNNNNNNGC	5 cut(s)	709, 1325, 1334, 1439, 1886
NciI	CCSGG	1 cut(s)	1154
NcoI	CCATGG	1 cut(s)	1359
NlaIII	CATG	9 cut(s)	274, 749, 1016, 1100, 1272, 1363, 1382, 1666, 1795
NlaIV	GGNNCC	5 cut(s)	546, 599, 1077, 1932, 2029
NmuCI	GTSAC	2 cut(s)	1191, 1624
PctI	GAATGC	1 cut(s)	1184
PdmI	GAANNNNTTC	2 cut(s)	1465, 1746
PfeI	GAWTC	6 cut(s)	49, 769, 967, 1009, 1220, 1903
PflMI	CCANNNNNTGG	1 cut(s)	445
PfoI	TCCNGGA	1 cut(s)	1152
PkrI	GCNGC	7 cut(s)	1327, 1339, 1474, 1531, 1565, 1612, 1717
PleI	GAGTC	3 cut(s)	555, 1363, 1760
PpsI	GAGTC	3 cut(s)	555, 1363, 1760
Ppu21I	YACGTR	1 cut(s)	1711
PshBI	ATTAAT	2 cut(s)	816, 933
Psp6I	CCWGG	2 cut(s)	1419, 2030
PspGI	CCWGG	2 cut(s)	1419, 2030
PspN4I	GGNNCC	5 cut(s)	546, 599, 1077, 1932, 2029
PspOMI	GGGCCC	1 cut(s)	597
PspPI	GGNCC	7 cut(s)	44, 597, 598, 1427, 1508, 1867, 2034
PstI	CTGCAG	1 cut(s)	1477
PsuI	RGATCY	6 cut(s)	544, 715, 891, 900, 1480, 1672
RsaI	GTAC	8 cut(s)	677, 822, 944, 1062, 1211, 1280, 1709, 2063
RsaNI	GTAC	8 cut(s)	676, 821, 943, 1061, 1210, 1279, 1708, 2062
RseI	CAYNNNNRTG	3 cut(s)	498, 852, 1661
SatI	GCNGC	7 cut(s)	1326, 1338, 1473, 1530, 1564, 1611, 1716
Sau96I	GGNCC	7 cut(s)	44, 597, 598, 1427, 1508, 1867, 2034
ScaI	AGTACT	2 cut(s)	944, 2063
SchI	GAGTC	3 cut(s)	555, 1364, 1761
ScrFI	CCNGG	3 cut(s)	1154, 1421, 2032
SduI	GDGCHC	4 cut(s)	417, 601, 1296, 1321
SfaNI	GCATC	2 cut(s)	1825, 2038
SfcI	CTRYAG	1 cut(s)	1473
SinI	GGWCC	3 cut(s)	44, 1508, 1867
SmiMI	CAYNNNNRTG	3 cut(s)	498, 852, 1661
SmlI	CTYRAG	3 cut(s)	872, 1853, 1937
SmoI	CTYRAG	3 cut(s)	872, 1853, 1937
SsiI	CCGC	4 cut(s)	11, 356, 1216, 1716
SspI	AATATT	1 cut(s)	931
SspMI	CTAG	3 cut(s)	594, 1568, 1907
StyD4I	CCNGG	3 cut(s)	1152, 1419, 2030
StyI	CCWWGG	4 cut(s)	593, 1282, 1359, 1839
TaaI	ACNGT	6 cut(s)	460, 776, 914, 1030, 1036, 1543
TaiI	ACGT	3 cut(s)	58, 139, 1713
TaqI	TCGA	5 cut(s)	308, 882, 1450, 1750, 1755
TaqII	GACCGA	1 cut(s)	61
TatI	WGTACW	5 cut(s)	675, 820, 942, 1060, 2061
TauI	GCSGC	1 cut(s)	1718
TfiI	GAWTC	6 cut(s)	49, 769, 967, 1009, 1220, 1903
TscAI	CASTG	5 cut(s)	183, 571, 919, 1546, 2058
TseFI	GTSAC	2 cut(s)	1191, 1624
TseI	GCWGC	6 cut(s)	1325, 1337, 1472, 1529, 1563, 1610
Tsp45I	GTSAC	2 cut(s)	1191, 1624
TspDTI	ATGAA	9 cut(s)	129, 240, 387, 422, 696, 731, 1001, 1113, 1938
TspRI	CASTG	5 cut(s)	183, 571, 919, 1546, 2058
Van91I	CCANNNNNTGG	1 cut(s)	445
Vha464I	CTTAAG	1 cut(s)	1937
VneI	GTGCAC	1 cut(s)	413
VpaK11BI	GGWCC	3 cut(s)	44, 1508, 1867
VspI	ATTAAT	2 cut(s)	816, 933
XapI	RAATTY	2 cut(s)	237, 1066
XbaI	TCTAGA	1 cut(s)	1906
XcmI	CCANNNNNNNNNTGG	1 cut(s)	320
XmaJI	CCTAGG	1 cut(s)	593
XmnI	GAANNNNTTC	2 cut(s)	1465, 1746
XspI	CTAG	3 cut(s)	594, 1568, 1907
ZrmI	AGTACT	2 cut(s)	944, 2063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.