Ubiquitin carboxyl-terminal hydrolase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 521, 1706 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 94, 145 |
| AccI | GTMKAC | 1 cut(s) | 3000 |
| AccII | CGCG | 1 cut(s) | 433 |
| AciI | CCGC | 6 cut(s) | 18, 59, 314, 1201, 2362, 3134 |
| AclWI | GGATC | 5 cut(s) | 146, 159, 479, 2093, 2522 |
| AcsI | RAATTY | 5 cut(s) | 381, 1409, 1523, 2276, 3039 |
| AcuI | CTGAAG | 4 cut(s) | 743, 992, 1154, 1308 |
| AcvI | CACGTG | 1 cut(s) | 174 |
| AcyI | GRCGYC | 1 cut(s) | 1811 |
| AfeI | AGCGCT | 1 cut(s) | 2612 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 64, 94, 145, 494, 495, 1380, 2227, 2302, 2541 |
| AflII | CTTAAG | 1 cut(s) | 602 |
| AflIII | ACRYGT | 1 cut(s) | 816 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3211 |
| AjiI | CACGTC | 1 cut(s) | 844 |
| AjnI | CCWGG | 2 cut(s) | 1498, 3195 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2007, 2039, 3024, 3056 |
| AleI | CACNNNNGTG | 2 cut(s) | 1211, 1344 |
| Alw21I | GWGCWC | 3 cut(s) | 2400, 2783, 3289 |
| Alw26I | GTCTC | 4 cut(s) | 578, 1079, 2304, 2832 |
| Alw44I | GTGCAC | 1 cut(s) | 2396 |
| AlwI | GGATC | 5 cut(s) | 146, 159, 479, 2093, 2522 |
| Ama87I | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| Aor51HI | AGCGCT | 1 cut(s) | 2612 |
| AoxI | GGCC | 4 cut(s) | 732, 1382, 1680, 2940 |
| ApaLI | GTGCAC | 1 cut(s) | 2396 |
| ApeKI | GCWGC | 3 cut(s) | 835, 2159, 3305 |
| ApoI | RAATTY | 5 cut(s) | 381, 1409, 1523, 2276, 3039 |
| AseI | ATTAAT | 2 cut(s) | 1221, 2799 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 926, 2949 |
| AspA2I | CCTAGG | 1 cut(s) | 3175 |
| AspLEI | GCGC | 2 cut(s) | 433, 2613 |
| AspS9I | GGNCC | 4 cut(s) | 733, 2629, 2940, 2975 |
| AsuC2I | CCSGG | 3 cut(s) | 1157, 1717, 1718 |
| AsuHPI | GGTGA | 6 cut(s) | 77, 1094, 1225, 1275, 1484, 3095 |
| AsuII | TTCGAA | 1 cut(s) | 930 |
| AvaI | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| AvaII | GGWCC | 2 cut(s) | 2629, 2975 |
| AvrII | CCTAGG | 1 cut(s) | 3175 |
| AxyI | CCTNAGG | 2 cut(s) | 270, 2205 |
| BaeGI | GKGCMC | 3 cut(s) | 1365, 1453, 2400 |
| BamHI | GGATCC | 1 cut(s) | 151 |
| BanII | GRGCYC | 2 cut(s) | 372, 2247 |
| BbrPI | CACGTG | 1 cut(s) | 174 |
| BbsI | GAAGAC | 1 cut(s) | 888 |
| Bbv12I | GWGCWC | 3 cut(s) | 2400, 2783, 3289 |
| BbvCI | CCTCAGC | 1 cut(s) | 531 |
| BbvI | GCAGC | 3 cut(s) | 847, 2171, 3317 |
| BccI | CCATC | 8 cut(s) | 166, 721, 804, 2273, 2300, 2386, 2539, 2733 |
| BciT130I | CCWGG | 2 cut(s) | 1500, 3197 |
| BciVI | GTATCC | 1 cut(s) | 1808 |
| BclI | TGATCA | 4 cut(s) | 28, 1396, 1771, 2920 |
| BcnI | CCSGG | 3 cut(s) | 1157, 1717, 1718 |
| BcoDI | GTCTC | 4 cut(s) | 578, 1079, 2304, 2832 |
| BfaI | CTAG | 6 cut(s) | 195, 1454, 2459, 3176, 3216, 3355 |
| BfmI | CTRYAG | 1 cut(s) | 737 |
| BfoI | RGCGCY | 1 cut(s) | 2614 |
| BfrI | CTTAAG | 1 cut(s) | 602 |
| BfuI | GTATCC | 1 cut(s) | 1808 |
| BisI | GCNGC | 3 cut(s) | 836, 2160, 3306 |
| BlnI | CCTAGG | 1 cut(s) | 3175 |
| BlpI | GCTNAGC | 1 cut(s) | 2508 |
| BlsI | GCNGC | 3 cut(s) | 837, 2161, 3307 |
| BmcAI | AGTACT | 2 cut(s) | 1535, 2149 |
| Bme1390I | CCNGG | 5 cut(s) | 1157, 1500, 1717, 1718, 3197 |
| Bme18I | GGWCC | 2 cut(s) | 2629, 2975 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3211 |
| BmeT110I | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| BmgBI | CACGTC | 1 cut(s) | 844 |
| BmgT120I | GGNCC | 4 cut(s) | 733, 2629, 2940, 2975 |
| BmiI | GGNNCC | 3 cut(s) | 153, 2952, 3057 |
| BmrFI | CCNGG | 5 cut(s) | 1157, 1500, 1717, 1718, 3197 |
| BmrI | ACTGGG | 1 cut(s) | 483 |
| BmsI | GCATC | 5 cut(s) | 39, 427, 969, 1111, 2827 |
| BmuI | ACTGGG | 1 cut(s) | 483 |
| BpiI | GAAGAC | 1 cut(s) | 888 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2343, 2375 |
| BpmI | CTGGAG | 3 cut(s) | 626, 2322, 3179 |
| Bpu10I | CCTNAGC | 1 cut(s) | 531 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2508 |
| Bpu14I | TTCGAA | 1 cut(s) | 930 |
| BpuEI | CTTGAG | 2 cut(s) | 2321, 2450 |
| BpuMI | CCSGG | 3 cut(s) | 1157, 1717, 1718 |
| BsaAI | YACGTR | 4 cut(s) | 174, 819, 1060, 1565 |
| BsaHI | GRCGYC | 1 cut(s) | 1811 |
| BsaJI | CCNNGG | 7 cut(s) | 93, 610, 1155, 1498, 1683, 1716, 3175 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2301, 2331 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 64, 94, 145, 494, 495, 1380, 2227, 2302, 2541 |
| Bse1I | ACTGG | 8 cut(s) | 143, 489, 566, 1859, 2155, 2339, 2933, 3338 |
| Bse21I | CCTNAGG | 2 cut(s) | 270, 2205 |
| Bse3DI | GCAATG | 2 cut(s) | 1241, 1600 |
| BseBI | CCWGG | 2 cut(s) | 1500, 3197 |
| BseDI | CCNNGG | 7 cut(s) | 93, 610, 1155, 1498, 1683, 1716, 3175 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 64, 94, 145, 494, 495, 1380, 2227, 2302, 2541 |
| BseMI | GCAATG | 2 cut(s) | 1241, 1600 |
| BseMII | CTCAG | 5 cut(s) | 522, 690, 2196, 2522, 3038 |
| BseNI | ACTGG | 8 cut(s) | 143, 489, 566, 1859, 2155, 2339, 2933, 3338 |
| BseRI | GAGGAG | 4 cut(s) | 629, 1472, 1847, 3155 |
| BseSI | GKGCMC | 3 cut(s) | 1365, 1453, 2400 |
| BseXI | GCAGC | 3 cut(s) | 847, 2171, 3317 |
| BseYI | CCCAGC | 1 cut(s) | 2583 |
| Bsh1236I | CGCG | 1 cut(s) | 433 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1261 |
| BshFI | GGCC | 4 cut(s) | 734, 1384, 1682, 2942 |
| BsiEI | CGRYCG | 1 cut(s) | 1261 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2400, 2783, 3289 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| BsiSI | CCGG | 2 cut(s) | 1157, 1717 |
| BslFI | GGGAC | 4 cut(s) | 41, 827, 1217, 2360 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 64, 94, 145, 494, 495, 1380, 2227, 2302, 2541 |
| BsmAI | GTCTC | 4 cut(s) | 578, 1079, 2304, 2832 |
| BsmBI | CGTCTC | 1 cut(s) | 1079 |
| BsmFI | GGGAC | 4 cut(s) | 41, 827, 1217, 2360 |
| BsmI | GAATGC | 2 cut(s) | 962, 2720 |
| BsnI | GGCC | 4 cut(s) | 734, 1384, 1682, 2942 |
| BsoBI | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| Bsp119I | TTCGAA | 1 cut(s) | 930 |
| Bsp1286I | GDGCHC | 7 cut(s) | 372, 1365, 1453, 2247, 2400, 2783, 3289 |
| Bsp1407I | TGTACA | 1 cut(s) | 1557 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2508 |
| Bsp19I | CCATGG | 1 cut(s) | 93 |
| BspACI | CCGC | 6 cut(s) | 18, 59, 314, 1201, 2362, 3134 |
| BspANI | GGCC | 4 cut(s) | 734, 1384, 1682, 2942 |
| BspCNI | CTCAG | 5 cut(s) | 523, 691, 2197, 2521, 3037 |
| BspFNI | CGCG | 1 cut(s) | 433 |
| BspHI | TCATGA | 2 cut(s) | 9, 1774 |
| BspLI | GGNNCC | 3 cut(s) | 153, 2952, 3057 |
| BspMAI | CTGCAG | 1 cut(s) | 741 |
| BspPI | GGATC | 5 cut(s) | 146, 159, 479, 2093, 2522 |
| BspT104I | TTCGAA | 1 cut(s) | 930 |
| BspTI | CTTAAG | 1 cut(s) | 602 |
| BsrDI | GCAATG | 2 cut(s) | 1241, 1600 |
| BsrGI | TGTACA | 1 cut(s) | 1557 |
| BsrI | ACTGG | 8 cut(s) | 143, 489, 566, 1859, 2155, 2339, 2933, 3338 |
| BssECI | CCNNGG | 7 cut(s) | 93, 610, 1155, 1498, 1683, 1716, 3175 |
| BssNI | GRCGYC | 1 cut(s) | 1811 |
| BssT1I | CCWWGG | 3 cut(s) | 93, 610, 3175 |
| Bst2UI | CCWGG | 2 cut(s) | 1500, 3197 |
| Bst6I | CTCTTC | 7 cut(s) | 39, 1473, 2138, 2205, 2940, 2955, 3226 |
| BstACI | GRCGYC | 1 cut(s) | 1811 |
| BstAFI | CTTAAG | 1 cut(s) | 602 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 844, 1870 |
| BstAUI | TGTACA | 1 cut(s) | 1557 |
| BstBAI | YACGTR | 4 cut(s) | 174, 819, 1060, 1565 |
| BstBI | TTCGAA | 1 cut(s) | 930 |
| BstC8I | GCNNGC | 3 cut(s) | 2194, 2293, 2297 |
| BstDSI | CCRYGG | 1 cut(s) | 93 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1378, 2225 |
| BstFNI | CGCG | 1 cut(s) | 433 |
| BstH2I | RGCGCY | 1 cut(s) | 2614 |
| BstHHI | GCGC | 2 cut(s) | 433, 2613 |
| BstMAI | GTCTC | 4 cut(s) | 578, 1079, 2304, 2832 |
| BstMCI | CGRYCG | 1 cut(s) | 1261 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 58, 320, 844, 1360, 1870, 2198, 2551, 3305 |
| BstNI | CCWGG | 2 cut(s) | 1500, 3197 |
| BstNSI | RCATGY | 1 cut(s) | 1552 |
| BstSCI | CCNGG | 5 cut(s) | 1155, 1498, 1715, 1716, 3195 |
| BstSFI | CTRYAG | 1 cut(s) | 737 |
| BstSLI | GKGCMC | 3 cut(s) | 1365, 1453, 2400 |
| BstSNI | TACGTA | 1 cut(s) | 1060 |
| BstUI | CGCG | 1 cut(s) | 433 |
| BstV1I | GCAGC | 3 cut(s) | 847, 2171, 3317 |
| BstV2I | GAAGAC | 1 cut(s) | 888 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 339 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| Bsu36I | CCTNAGG | 2 cut(s) | 270, 2205 |
| BsuI | GTATCC | 1 cut(s) | 1808 |
| BsuRI | GGCC | 4 cut(s) | 734, 1384, 1682, 2942 |
| BtgI | CCRYGG | 1 cut(s) | 93 |
| BtgZI | GCGATG | 3 cut(s) | 699, 1597, 2535 |
| BtrI | CACGTC | 1 cut(s) | 844 |
| BtsIMutI | CAGTG | 9 cut(s) | 150, 772, 1333, 1348, 1406, 1866, 2781, 2902, 3289 |
| Cac8I | GCNNGC | 3 cut(s) | 2194, 2293, 2297 |
| CciI | TCATGA | 2 cut(s) | 9, 1774 |
| CfoI | GCGC | 2 cut(s) | 433, 2613 |
| Cfr13I | GGNCC | 4 cut(s) | 733, 2629, 2940, 2975 |
| Cfr9I | CCCGGG | 1 cut(s) | 1716 |
| CseI | GACGC | 2 cut(s) | 1819, 1883 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2323, 2358 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3211 |
| Eam1104I | CTCTTC | 7 cut(s) | 39, 1473, 2138, 2205, 2940, 2955, 3226 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3211 |
| EarI | CTCTTC | 7 cut(s) | 39, 1473, 2138, 2205, 2940, 2955, 3226 |
| Eco105I | TACGTA | 1 cut(s) | 1060 |
| Eco130I | CCWWGG | 3 cut(s) | 93, 610, 3175 |
| Eco24I | GRGCYC | 2 cut(s) | 372, 2247 |
| Eco47I | GGWCC | 2 cut(s) | 2629, 2975 |
| Eco47III | AGCGCT | 1 cut(s) | 2612 |
| Eco57I | CTGAAG | 4 cut(s) | 743, 992, 1154, 1308 |
| Eco72I | CACGTG | 1 cut(s) | 174 |
| Eco81I | CCTNAGG | 2 cut(s) | 270, 2205 |
| Eco88I | CYCGRG | 3 cut(s) | 1076, 1716, 3108 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1378, 2225 |
| EcoRII | CCWGG | 2 cut(s) | 1498, 3195 |
| EcoT14I | CCWWGG | 3 cut(s) | 93, 610, 3175 |
| EcoT22I | ATGCAT | 2 cut(s) | 962, 1546 |
| EcoT38I | GRGCYC | 2 cut(s) | 372, 2247 |
| ErhI | CCWWGG | 3 cut(s) | 93, 610, 3175 |
| Esp3I | CGTCTC | 1 cut(s) | 1079 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 712, 744, 1994, 2026, 2007, 2039 |
| FaqI | GGGAC | 4 cut(s) | 41, 827, 1217, 2360 |
| FauI | CCCGC | 3 cut(s) | 25, 66, 1194 |
| FauNDI | CATATG | 4 cut(s) | 334, 568, 687, 942 |
| FbaI | TGATCA | 4 cut(s) | 28, 1396, 1771, 2920 |
| FblI | GTMKAC | 1 cut(s) | 3000 |
| Fnu4HI | GCNGC | 3 cut(s) | 836, 2160, 3306 |
| FriOI | GRGCYC | 2 cut(s) | 372, 2247 |
| Fsp4HI | GCNGC | 3 cut(s) | 836, 2160, 3306 |
| FspBI | CTAG | 6 cut(s) | 195, 1454, 2459, 3176, 3216, 3355 |
| GlaI | GCGC | 2 cut(s) | 432, 2612 |
| GluI | GCNGC | 3 cut(s) | 836, 2160, 3306 |
| GsaI | CCCAGC | 1 cut(s) | 2587 |
| GsuI | CTGGAG | 3 cut(s) | 626, 2322, 3179 |
| HaeII | RGCGCY | 1 cut(s) | 2614 |
| HaeIII | GGCC | 4 cut(s) | 734, 1384, 1682, 2942 |
| HapII | CCGG | 2 cut(s) | 1157, 1717 |
| HgaI | GACGC | 2 cut(s) | 1819, 1883 |
| HhaI | GCGC | 2 cut(s) | 433, 2613 |
| Hin1I | GRCGYC | 1 cut(s) | 1811 |
| Hin6I | GCGC | 2 cut(s) | 431, 2611 |
| HinP1I | GCGC | 2 cut(s) | 431, 2611 |
| HindIII | AAGCTT | 3 cut(s) | 212, 755, 2090 |
| HinfI | GANTC | 9 cut(s) | 168, 317, 572, 742, 824, 992, 1503, 3200, 3316 |
| HpaII | CCGG | 2 cut(s) | 1157, 1717 |
| HphI | GGTGA | 6 cut(s) | 77, 1094, 1225, 1275, 1484, 3095 |
| HpyAV | CCTTC | 6 cut(s) | 886, 926, 1016, 1741, 2124, 3074 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 58, 320, 844, 1360, 1870, 2198, 2551, 3305 |
| Hsp92I | GRCGYC | 1 cut(s) | 1811 |
| HspAI | GCGC | 2 cut(s) | 431, 2611 |
| Ksp22I | TGATCA | 4 cut(s) | 28, 1396, 1771, 2920 |
| LmnI | GCTCC | 6 cut(s) | 614, 1459, 2053, 2206, 3253, 3292 |
| Lsp1109I | GCAGC | 3 cut(s) | 847, 2171, 3317 |
| LweI | GCATC | 5 cut(s) | 39, 427, 969, 1111, 2827 |
| MaeI | CTAG | 6 cut(s) | 195, 1454, 2459, 3176, 3216, 3355 |
| MaeIII | GTNAC | 6 cut(s) | 767, 1426, 1482, 1571, 2561, 2934 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MhlI | GDGCHC | 7 cut(s) | 372, 1365, 1453, 2247, 2400, 2783, 3289 |
| MlyI | GAGTC | 3 cut(s) | 566, 751, 3194 |
| MmeI | TCCRAC | 3 cut(s) | 1936, 2107, 3228 |
| Mph1103I | ATGCAT | 2 cut(s) | 962, 1546 |
| MroXI | GAANNNNTTC | 2 cut(s) | 926, 2949 |
| MspA1I | CMGCKG | 1 cut(s) | 2162 |
| MspCI | CTTAAG | 1 cut(s) | 602 |
| MspI | CCGG | 2 cut(s) | 1157, 1717 |
| MspR9I | CCNGG | 5 cut(s) | 1157, 1500, 1717, 1718, 3197 |
| Mva1269I | GAATGC | 2 cut(s) | 962, 2720 |
| MvaI | CCWGG | 2 cut(s) | 1500, 3197 |
| MvnI | CGCG | 1 cut(s) | 433 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 58, 320, 844, 1360, 1870, 2198, 2551, 3305 |
| NciI | CCSGG | 3 cut(s) | 1157, 1717, 1718 |
| NcoI | CCATGG | 1 cut(s) | 93 |
| NdeI | CATATG | 4 cut(s) | 334, 568, 687, 942 |
| NlaIV | GGNNCC | 3 cut(s) | 153, 2952, 3057 |
| NmeAIII | GCCGAG | 1 cut(s) | 1708 |
| NmuCI | GTSAC | 3 cut(s) | 767, 1426, 1571 |
| NsiI | ATGCAT | 2 cut(s) | 962, 1546 |
| NspI | RCATGY | 1 cut(s) | 1552 |
| NspV | TTCGAA | 1 cut(s) | 930 |
| OliI | CACNNNNGTG | 2 cut(s) | 1211, 1344 |
| PaeR7I | CTCGAG | 2 cut(s) | 1076, 3108 |
| PagI | TCATGA | 2 cut(s) | 9, 1774 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1918 |
| PctI | GAATGC | 2 cut(s) | 962, 2720 |
| PdmI | GAANNNNTTC | 2 cut(s) | 926, 2949 |
| PfeI | GAWTC | 6 cut(s) | 168, 317, 824, 992, 1503, 3316 |
| PflFI | GACNNNGTC | 1 cut(s) | 799 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 94, 145 |
| PfoI | TCCNGGA | 1 cut(s) | 3195 |
| PkrI | GCNGC | 3 cut(s) | 837, 2161, 3307 |
| Ple19I | CGATCG | 1 cut(s) | 1261 |
| PleI | GAGTC | 3 cut(s) | 566, 750, 3194 |
| PmaCI | CACGTG | 1 cut(s) | 174 |
| PmlI | CACGTG | 1 cut(s) | 174 |
| PpsI | GAGTC | 3 cut(s) | 566, 750, 3194 |
| Ppu21I | YACGTR | 4 cut(s) | 174, 819, 1060, 1565 |
| PshBI | ATTAAT | 2 cut(s) | 1221, 2799 |
| PsiI | TTATAA | 2 cut(s) | 521, 1706 |
| Psp6I | CCWGG | 2 cut(s) | 1498, 3195 |
| PspCI | CACGTG | 1 cut(s) | 174 |
| PspFI | CCCAGC | 1 cut(s) | 2583 |
| PspGI | CCWGG | 2 cut(s) | 1498, 3195 |
| PspN4I | GGNNCC | 3 cut(s) | 153, 2952, 3057 |
| PspPI | GGNCC | 4 cut(s) | 733, 2629, 2940, 2975 |
| PspXI | VCTCGAGB | 1 cut(s) | 3108 |
| PstI | CTGCAG | 1 cut(s) | 741 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| PsyI | GACNNNGTC | 1 cut(s) | 799 |
| PvuI | CGATCG | 1 cut(s) | 1261 |
| PvuII | CAGCTG | 1 cut(s) | 2162 |
| SatI | GCNGC | 3 cut(s) | 836, 2160, 3306 |
| Sau96I | GGNCC | 4 cut(s) | 733, 2629, 2940, 2975 |
| ScaI | AGTACT | 2 cut(s) | 1535, 2149 |
| SchI | GAGTC | 3 cut(s) | 566, 751, 3194 |
| ScrFI | CCNGG | 5 cut(s) | 1157, 1500, 1717, 1718, 3197 |
| SduI | GDGCHC | 7 cut(s) | 372, 1365, 1453, 2247, 2400, 2783, 3289 |
| SfaNI | GCATC | 5 cut(s) | 39, 427, 969, 1111, 2827 |
| SfcI | CTRYAG | 1 cut(s) | 737 |
| Sfr274I | CTCGAG | 2 cut(s) | 1076, 3108 |
| SfuI | TTCGAA | 1 cut(s) | 930 |
| SinI | GGWCC | 2 cut(s) | 2629, 2975 |
| SlaI | CTCGAG | 2 cut(s) | 1076, 3108 |
| SmaI | CCCGGG | 1 cut(s) | 1718 |
| SmlI | CTYRAG | 5 cut(s) | 602, 1076, 2300, 2429, 3108 |
| SmoI | CTYRAG | 5 cut(s) | 602, 1076, 2300, 2429, 3108 |
| SnaBI | TACGTA | 1 cut(s) | 1060 |
| SsiI | CCGC | 6 cut(s) | 18, 59, 314, 1201, 2362, 3134 |
| SspI | AATATT | 2 cut(s) | 1277, 2169 |
| SspMI | CTAG | 6 cut(s) | 195, 1454, 2459, 3176, 3216, 3355 |
| StyD4I | CCNGG | 5 cut(s) | 1155, 1498, 1715, 1716, 3195 |
| StyI | CCWWGG | 3 cut(s) | 93, 610, 3175 |
| TatI | WGTACW | 6 cut(s) | 762, 1533, 1557, 2147, 2658, 3112 |
| TfiI | GAWTC | 6 cut(s) | 168, 317, 824, 992, 1503, 3316 |
| TscAI | CASTG | 9 cut(s) | 150, 772, 1333, 1348, 1406, 1866, 2788, 2902, 3289 |
| TseFI | GTSAC | 3 cut(s) | 767, 1426, 1571 |
| TseI | GCWGC | 3 cut(s) | 835, 2159, 3305 |
| Tsp45I | GTSAC | 3 cut(s) | 767, 1426, 1571 |
| TspGWI | ACGGA | 1 cut(s) | 2663 |
| TspMI | CCCGGG | 1 cut(s) | 1716 |
| TspRI | CASTG | 9 cut(s) | 150, 772, 1333, 1348, 1406, 1866, 2788, 2902, 3289 |
| Tth111I | GACNNNGTC | 1 cut(s) | 799 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 94, 145 |
| Vha464I | CTTAAG | 1 cut(s) | 602 |
| VneI | GTGCAC | 1 cut(s) | 2396 |
| VpaK11BI | GGWCC | 2 cut(s) | 2629, 2975 |
| VspI | ATTAAT | 2 cut(s) | 1221, 2799 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1378, 2225 |
| XapI | RAATTY | 5 cut(s) | 381, 1409, 1523, 2276, 3039 |
| XceI | RCATGY | 1 cut(s) | 1552 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2303 |
| XhoI | CTCGAG | 2 cut(s) | 1076, 3108 |
| XmaI | CCCGGG | 1 cut(s) | 1716 |
| XmaJI | CCTAGG | 1 cut(s) | 3175 |
| XmiI | GTMKAC | 1 cut(s) | 3000 |
| XmnI | GAANNNNTTC | 2 cut(s) | 926, 2949 |
| XspI | CTAG | 6 cut(s) | 195, 1454, 2459, 3176, 3216, 3355 |
| ZrmI | AGTACT | 2 cut(s) | 1535, 2149 |
| Zsp2I | ATGCAT | 2 cut(s) | 962, 1546 |