Rroxscaffold_1G00032320

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
46239782 .. 46254635
14854 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00032320.1

Sequence Viewer

Length: 2160 bp
ATGCGAGACACCATGGTGAAGATTAATGACCGTTATGAGTTCCCTTTGCAACTTGACCTTGATCGAGATAATGGAAAATATTTATCACCTGAAGCTGATAGGAGTGTTCGCAACCTTTACACACTTCACAGTGTATTGGTACACAGTGGTGGGGTGCATGGTGGACATTACTACGCCTTTATCAGACCAACGCTTTCTGATCAGTGGTACAAATTTGATGATGAGAGGGTAACAAAAGAAGATATAAAGAGGGCACTGGAGGAGCAGTATGGTGGCGAGGAAGAGCTACCGCAGACAAACCCTGGATTTAATAACACTCCTTTCAAATTTACAAAATACTCAAACGCGTACATGCTGGTGTACATACGTGAAACTGACAAGGATAAAATAATTTGCAATGTTGATGAGAAGGACATTGCTGAACATCTACGGGAGAGGTTGAAGAAAGAACAAGAAGAAAAGGAGCACAAGAAGAAAGAAAAGGCAGAGGCACACCTATATACTATCATTAAGGTTGCCCGGGACGAGAACCTTCTGGAGCAGATTGGGAAGGATATATATTTTGATCTTGTGGATCATGACAAAGTCAAAAGTTTTCGTATTCAGAAGCAGATGCCTTTCAACCTTTTCAAGGAGGAGGTTGCTAAGGAGTTTGGCATACCAGTGCAATTTCAGCGGTTTTGGCTGTGGGCAAAGCGTCAAAACCATACATATCGTCCAAACCGTCCATTGACACCTGTGGAGGAAACACAATCTGTTGGGCAGTTGAGGGAGGTATCAAACAAGGTTCATAATGCAGAACTGAAGTTGTTCTTGGAAATAGAGCTTGGACCGGATTTACACCCTATCGCTCCACCTGACAAGACAAAGGATGATATTCTGCTTTTCTTTAAGCTTTATGATCCTGAAAAAGAAGAACTACGTTACGTTGGACGGCTTTTTGTGAAGAGTACTGGTAAGCCAGCTGAAATCTTGTCAAAATTAAATGAATTGGCTGGCTATGCCCCTGACGAGGAGATCGACCTTTACGAGGAAATTAAGTATGAGCCCACTGTCATGTGTGAACCCATCGATAAGAAATTCACATTTCGAGCCAGCCAGCTTGAGGATGGAGACATTGTTTGCTTCCAAAAACCAGTTCCGGTTGAAAATGGTCAGCAGTTCCGCTATCCAGATGTCCCATCTTTTCTGGATTTTGTGCACAATCGTCTCGTTGTTCATTTTCGATCGTTCGAGAAACCCAAAGAAGATGATTTCAGCTTAGAATTGTCAAAACTTCATACCTATGATGATGTTGTGGAGCGAGTAGCTCAACAACTTGGTTTGGACGATCCATCCAAAATTAGGCTTACCTCACATAATTGTTACTCCCAGCAACCCAAACCTCAGCCAATTAAGTATCGGGGGGTAGACCGTTTGACTGATATGCTGGTTCACTACAATCAGACTTCGGATATATTGTACTATGAAGTATTAGACATCCCTCTGCCTGAATTACAAGGTTTGAAAACCCTGAAAGTTGCATTCCATCATGCTACCAAGGATGAAGTGGTTATTCACACCATAAGACTGCCAAAACAGAGCACTGTTGGGGATGTAATCAATGATCTTAAAACTAAGGTTGAATTGTCTCATCCAGATGCCGAACTTAGGTTGCTCGAGGTTTTCTATCACAAGATATACAAGGTCTTTCCCCAAAGTGAAAAGATCGAAAACATAAATGATCAATACTGGACGTTACGTGCTGAAGAGGTTCCAGAGGAAGAGAAAAATCTTGGTCCTAATGACCGTGTAATTCATGTCTACCACTTCACTAAAGACACCGCTCAGAATCAAATGCAAATTCAAAACTTCGGGGAGCCTTTTTTCTTGGTTATACATGAAGGTGAGACCTTGGCTGAAATTAGAGGTCGGATACAAAAGAAATTACAGATTGCAGATGAGGAATTTACGAAGTGGAAGTTTGCATTTCTTTCGCTAGGTCGACCAGAGTATCTTCAGGACACTGACATTGTCTCTAGTCGGTTCCAGAGAAGAGATGTTTATGGTGCTTGGGAGCAGTATCTTGGGCTGGAGCACTCTGACAGTGCTCCTAAAAGAGCTTATGCAGCTAATCAGAATCGCCACACATTTGAGAAGCCGGTGAAAATCTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

719

Amino Acids

84.71

Weight (kDa)

5.74

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 4 - 121 1.8e-19 Ubiquitin carboxyl-terminal hydrolase
USP7_ICP0_bdg PF12436 225 - 477 1.7e-78 ICP0-binding domain of Ubiquitin-specific protease 7
USP7_C2 PF14533 487 - 697 1.1e-55 Ubiquitin-specific protease C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000333)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11910 AT3G11910 AT3G11910 AT3G11910 AT5G06600 AT5G06600 AT5G06600
fragaria_vesca FvH4_3g26930 FvH4_3g39132 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220
malus_domestica MD02G1261100.v1.1 MD03G1161100.v1.1 MD07G1059900.v1.1 MD11G1177100.v1.1 MD12G1047900.v1.1 MD12G1048000.v1.1 MD12G1048400.v1.1 MD12G1048500.v1.1 MD12G1048700.v1.1 MD12G1048800.v1.1 MD12G1056200.v1.1 MD14G1046300.v1.1 MD14G1046500.v1.1 MD15G1166900.v1.1
prunus_persica Prupe.2G066200_v2.0.a1 Prupe.2G066200_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1
pyrus_communis pycom02g22320 pycom03g11340 pycom07g04580 pycom11g14290 pycom11g15110 pycom12g04110 pycom12g04140 pycom12g04160 pycom12g04210 pycom12g04220 pycom12g04230 pycom12g04290 pycom12g04320 pycom12g04330 pycom12g04350 pycom12g04360 pycom14g03880 pycom14g03900 pycom16g18750
rosa_chinensis RchiOBHm_Chr1g0324111 RchiOBHm_Chr1g0324241 RchiOBHm_Chr3g0477691 RchiOBHm_Chr5g0049371 RchiOBHm_Chr5g0070531
rosa_laevigata RLG00000008612 RLG00000023698 RLG00000034613 RLG00000036139
rosa_multiflora Rmu_co8271779.1_g000001 Rmu_sc0006187.1_g000014
rosa_roxburghii Rroxscaffold_1G00010670 Rroxscaffold_1G00030450 Rroxscaffold_1G00031950 Rroxscaffold_1G00031970 Rroxscaffold_1G00032320 Rroxscaffold_1G00055490 Rroxscaffold_2G00083610 Rroxscaffold_2G00084480 Rroxscaffold_2G00115610 Rroxscaffold_3G00261320 Rroxscaffold_4G00312220 Rroxscaffold_4G00325820 Rroxscaffold_5G00339170 Rroxscaffold_5G00364030 Rroxscaffold_6G00403750
rosa_rugosa Rorug03G0162700 Rorug03G0162800 Rorug03G0162900 Rorug05G0247700 Rorug05G0406600 Rorug05G0406800
rosa_samantha Rh1AG060300 Rh3AG213000 Rh3BG246600 Rh3CG240400 Rh3DG239700 Rh5AG324400 Rh5AG462100 Rh5BG335500 Rh5BG480200 Rh5BG480300 Rh5CG360200 Rh5CG504500 Rh5CG504600 Rh5DG347800 Rh5DG492200 Rh5DG492300
rosa_wichuraiana Rw3G019270 Rw3G026910 Rw5G030650 Rw5G032610 Rw5G043040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1826
AccI GTMKAC 3 cut(s) 1410, 1803, 1984
AccII CGCG 1 cut(s) 347
AciI CCGC 4 cut(s) 290, 676, 1165, 1824
AclWI GGATC 3 cut(s) 582, 896, 1325
AcsI RAATTY 5 cut(s) 212, 326, 1079, 1842, 1946
AcuI CTGAAG 4 cut(s) 111, 824, 1767, 1982
AfaI GTAC 6 cut(s) 141, 209, 350, 362, 952, 1463
AfiI CCNNNNNNNGG 6 cut(s) 631, 1012, 1030, 1105, 1344, 1650
AflIII ACRYGT 1 cut(s) 345
AgsI TTSAA 8 cut(s) 325, 442, 622, 631, 1148, 1507, 1625, 1847
AjnI CCWGG 1 cut(s) 301
AjuI GAANNNNNNNTTGG 6 cut(s) 797, 810, 829, 842, 1122, 1154
AleI CACNNNNGTG 2 cut(s) 14, 147
Alw21I GWGCWC 5 cut(s) 468, 1203, 1586, 2079, 2092
Alw26I GTCTC 5 cut(s) 1107, 1214, 1635, 1883, 2020
Alw44I GTGCAC 1 cut(s) 1199
AlwI GGATC 3 cut(s) 582, 896, 1325
Ama87I CYCGRG 2 cut(s) 519, 1658
ApaLI GTGCAC 1 cut(s) 1199
ApeKI GCWGC 1 cut(s) 2108
ApoI RAATTY 5 cut(s) 212, 326, 1079, 1842, 1946
AseI ATTAAT 1 cut(s) 24
Asp700I GAANNNNTTC 2 cut(s) 809, 1752
AspS9I GGNCC 2 cut(s) 830, 1778
AsuC2I CCSGG 2 cut(s) 520, 521
AsuHPI GGTGA 4 cut(s) 28, 78, 1898, 2155
AvaI CYCGRG 2 cut(s) 519, 1658
AvaII GGWCC 2 cut(s) 830, 1778
BaeGI GKGCMC 2 cut(s) 256, 1203
BaeI ACNNNNGTAYC 2 cut(s) 1976, 2009
BanII GRGCYC 1 cut(s) 1050
Bbv12I GWGCWC 5 cut(s) 468, 1203, 1586, 2079, 2092
BbvCI CCTCAGC 1 cut(s) 1386
BbvI GCAGC 1 cut(s) 2120
BccI CCATC 5 cut(s) 1076, 1103, 1189, 1342, 1536
BceAI ACGGC 1 cut(s) 950
BcgI CGANNNNNNTGC 2 cut(s) 1956, 1990
BciT130I CCWGG 1 cut(s) 303
BciVI GTATCC 1 cut(s) 1908
BclI TGATCA 2 cut(s) 199, 1723
BcnI CCSGG 2 cut(s) 520, 521
BcoDI GTCTC 5 cut(s) 1107, 1214, 1635, 1883, 2020
BfaI CTAG 3 cut(s) 1979, 2019, 2158
BfuI GTATCC 1 cut(s) 1908
BisI GCNGC 1 cut(s) 2109
BlsI GCNGC 1 cut(s) 2110
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 3 cut(s) 303, 520, 521
Bme18I GGWCC 2 cut(s) 830, 1778
BmeT110I CYCGRG 2 cut(s) 519, 1658
BmgT120I GGNCC 2 cut(s) 830, 1778
BmiI GGNNCC 3 cut(s) 1755, 1860, 2027
BmrFI CCNGG 3 cut(s) 303, 520, 521
BmsI GCATC 2 cut(s) 603, 1630
BpmI CTGGAG 3 cut(s) 278, 557, 2093
Bpu10I CCTNAGC 2 cut(s) 645, 1386
BpuEI CTTGAG 1 cut(s) 1124
BpuMI CCSGG 2 cut(s) 520, 521
Bsa29I ATCGAT 1 cut(s) 1071
BsaAI YACGTR 2 cut(s) 368, 1742
BsaI GGTCTC 1 cut(s) 1883
BsaJI CCNNGG 5 cut(s) 12, 301, 519, 1539, 1893
BsaWI WCCGGW 2 cut(s) 832, 1141
BsaXI ACNNNNNCTCC 4 cut(s) 251, 281, 1104, 1134
Bsc4I CCNNNNNNNGG 6 cut(s) 631, 1012, 1030, 1105, 1344, 1650
Bse118I RCCGGY 1 cut(s) 2140
Bse1I ACTGG 5 cut(s) 261, 662, 958, 1136, 1736
Bse3DI GCAATG 2 cut(s) 403, 414
BseBI CCWGG 1 cut(s) 303
BseCI ATCGAT 1 cut(s) 1071
BseDI CCNNGG 5 cut(s) 12, 301, 519, 1539, 1893
BseGI GGATG 7 cut(s) 877, 1114, 1334, 1479, 1549, 1600, 1633
BseLI CCNNNNNNNGG 6 cut(s) 631, 1012, 1030, 1105, 1344, 1650
BseMI GCAATG 2 cut(s) 403, 414
BseMII CTCAG 2 cut(s) 1400, 1841
BseNI ACTGG 5 cut(s) 261, 662, 958, 1136, 1736
BseRI GAGGAG 3 cut(s) 275, 650, 1028
BseSI GKGCMC 2 cut(s) 256, 1203
BseXI GCAGC 1 cut(s) 2120
BseYI CCCAGC 1 cut(s) 1371
Bsh1236I CGCG 1 cut(s) 347
Bsh1285I CGRYCG 1 cut(s) 1229
BshVI ATCGAT 1 cut(s) 1071
BsiEI CGRYCG 1 cut(s) 1229
BsiHKAI GWGCWC 5 cut(s) 468, 1203, 1586, 2079, 2092
BsiHKCI CYCGRG 2 cut(s) 519, 1658
BsiSI CCGG 4 cut(s) 520, 833, 1142, 2141
BslFI GGGAC 2 cut(s) 536, 1163
BslI CCNNNNNNNGG 6 cut(s) 631, 1012, 1030, 1105, 1344, 1650
BsmAI GTCTC 5 cut(s) 1107, 1214, 1635, 1883, 2020
BsmBI CGTCTC 1 cut(s) 1214
BsmFI GGGAC 2 cut(s) 536, 1163
BsmI GAATGC 1 cut(s) 1523
Bso31I GGTCTC 1 cut(s) 1883
BsoBI CYCGRG 2 cut(s) 519, 1658
Bsp1286I GDGCHC 7 cut(s) 256, 468, 1050, 1203, 1586, 2079, 2092
Bsp1407I TGTACA 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 4 cut(s) 290, 676, 1165, 1824
BspCNI CTCAG 2 cut(s) 1399, 1840
BspDI ATCGAT 1 cut(s) 1071
BspFNI CGCG 1 cut(s) 347
BspHI TCATGA 1 cut(s) 577
BspLI GGNNCC 3 cut(s) 1755, 1860, 2027
BspPI GGATC 3 cut(s) 582, 896, 1325
BspQI GCTCTTC 1 cut(s) 276
BspTNI GGTCTC 1 cut(s) 1883
BsrBI CCGCTC 1 cut(s) 1826
BsrDI GCAATG 2 cut(s) 403, 414
BsrFI RCCGGY 1 cut(s) 2140
BsrGI TGTACA 1 cut(s) 360
BsrI ACTGG 5 cut(s) 261, 662, 958, 1136, 1736
BssAI RCCGGY 1 cut(s) 2140
BssECI CCNNGG 5 cut(s) 12, 301, 519, 1539, 1893
BssT1I CCWWGG 3 cut(s) 12, 1539, 1893
Bst2UI CCWGG 1 cut(s) 303
Bst4CI ACNGT 9 cut(s) 32, 131, 146, 725, 1054, 1415, 1588, 1790, 2087
Bst6I CTCTTC 5 cut(s) 276, 941, 1743, 1758, 2029
BstAUI TGTACA 1 cut(s) 360
BstBAI YACGTR 2 cut(s) 368, 1742
BstC8I GCNNGC 4 cut(s) 963, 997, 1096, 1100
BstDEI CTNAG 6 cut(s) 645, 1261, 1386, 1617, 1649, 1827
BstDSI CCRYGG 1 cut(s) 12
BstENI CCTNNNNNAGG 2 cut(s) 629, 1028
BstF5I GGATG 7 cut(s) 877, 1114, 1334, 1479, 1549, 1600, 1633
BstFNI CGCG 1 cut(s) 347
BstMAI GTCTC 5 cut(s) 1107, 1214, 1635, 1883, 2020
BstMCI CGRYCG 1 cut(s) 1229
BstMWI GCNNNNNNNGC 4 cut(s) 673, 682, 1001, 2108
BstNI CCWGG 1 cut(s) 303
BstNSI RCATGY 1 cut(s) 355
BstSCI CCNGG 3 cut(s) 301, 518, 519
BstSLI GKGCMC 2 cut(s) 256, 1203
BstUI CGCG 1 cut(s) 347
BstV1I GCAGC 1 cut(s) 2120
Bsu15I ATCGAT 1 cut(s) 1071
BsuI GTATCC 1 cut(s) 1908
BsuTUI ATCGAT 1 cut(s) 1071
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 7 cut(s) 877, 1114, 1334, 1479, 1549, 1600, 1633
BtsIMutI CAGTG 9 cut(s) 136, 151, 209, 254, 669, 1050, 1584, 2004, 2092
Cac8I GCNNGC 4 cut(s) 963, 997, 1096, 1100
CciI TCATGA 1 cut(s) 577
Cfr10I RCCGGY 1 cut(s) 2140
Cfr13I GGNCC 2 cut(s) 830, 1778
Cfr9I CCCGGG 1 cut(s) 519
ClaI ATCGAT 1 cut(s) 1071
CseI GACGC 1 cut(s) 686
Csp6I GTAC 6 cut(s) 140, 208, 349, 361, 951, 1462
CviAII CATG 8 cut(s) 13, 158, 352, 578, 1057, 1532, 1799, 1880
CviQI GTAC 6 cut(s) 140, 208, 349, 361, 951, 1462
DdeI CTNAG 6 cut(s) 645, 1261, 1386, 1617, 1649, 1827
Eam1104I CTCTTC 5 cut(s) 276, 941, 1743, 1758, 2029
EarI CTCTTC 5 cut(s) 276, 941, 1743, 1758, 2029
Eco130I CCWWGG 3 cut(s) 12, 1539, 1893
Eco24I GRGCYC 1 cut(s) 1050
Eco31I GGTCTC 1 cut(s) 1883
Eco47I GGWCC 2 cut(s) 830, 1778
Eco57I CTGAAG 4 cut(s) 111, 824, 1767, 1982
Eco88I CYCGRG 2 cut(s) 519, 1658
EcoNI CCTNNNNNAGG 2 cut(s) 629, 1028
EcoRII CCWGG 1 cut(s) 301
EcoT14I CCWWGG 3 cut(s) 12, 1539, 1893
EcoT38I GRGCYC 1 cut(s) 1050
ErhI CCWWGG 3 cut(s) 12, 1539, 1893
Esp3I CGTCTC 1 cut(s) 1214
FaeI CATG 8 cut(s) 16, 161, 355, 581, 1060, 1535, 1802, 1883
FalI AAGNNNNNCTT 2 cut(s) 797, 829
FaqI GGGAC 2 cut(s) 536, 1163
FatI CATG 8 cut(s) 12, 157, 351, 577, 1056, 1531, 1798, 1879
FbaI TGATCA 2 cut(s) 199, 1723
FblI GTMKAC 3 cut(s) 1410, 1803, 1984
Fnu4HI GCNGC 1 cut(s) 2109
FokI GGATG 7 cut(s) 884, 1121, 1321, 1466, 1556, 1607, 1620
FriOI GRGCYC 1 cut(s) 1050
Fsp4HI GCNGC 1 cut(s) 2109
FspBI CTAG 3 cut(s) 1979, 2019, 2158
GluI GCNGC 1 cut(s) 2109
GsaI CCCAGC 1 cut(s) 1375
GsuI CTGGAG 3 cut(s) 278, 557, 2093
HapII CCGG 4 cut(s) 520, 833, 1142, 2141
HgaI GACGC 1 cut(s) 686
Hin1II CATG 8 cut(s) 16, 161, 355, 581, 1060, 1535, 1802, 1883
HincII GTYRAC 1 cut(s) 1985
HindII GTYRAC 1 cut(s) 1985
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 2 cut(s) 1831, 2119
HpaII CCGG 4 cut(s) 520, 833, 1142, 2141
HphI GGTGA 4 cut(s) 28, 78, 1898, 2155
Hpy166II GTNNAC 9 cut(s) 142, 164, 361, 1064, 1201, 1411, 1435, 1804, 1985
Hpy188I TCNGA 9 cut(s) 185, 199, 606, 1446, 1453, 1830, 1914, 2083, 2118
Hpy8I GTNNAC 9 cut(s) 142, 164, 361, 1064, 1201, 1411, 1435, 1804, 1985
HpyAV CCTTC 4 cut(s) 403, 542, 544, 1877
HpyCH4III ACNGT 9 cut(s) 32, 131, 146, 725, 1054, 1415, 1588, 1790, 2087
HpyCH4IV ACGT 5 cut(s) 367, 922, 927, 1736, 1741
HpyF10VI GCNNNNNNNGC 4 cut(s) 673, 682, 1001, 2108
HpyF3I CTNAG 6 cut(s) 645, 1261, 1386, 1617, 1649, 1827
HpySE526I ACGT 5 cut(s) 367, 922, 927, 1736, 1741
Hsp92II CATG 8 cut(s) 16, 161, 355, 581, 1060, 1535, 1802, 1883
Ksp22I TGATCA 2 cut(s) 199, 1723
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 9 cut(s) 262, 463, 538, 856, 1300, 1858, 2056, 2074, 2095
Lsp1109I GCAGC 1 cut(s) 2120
LweI GCATC 2 cut(s) 603, 1630
MaeI CTAG 3 cut(s) 1979, 2019, 2158
MaeII ACGT 5 cut(s) 367, 922, 927, 1736, 1741
MaeIII GTNAC 4 cut(s) 229, 923, 1364, 1737
MbiI CCGCTC 1 cut(s) 1826
MhlI GDGCHC 7 cut(s) 256, 468, 1050, 1203, 1586, 2079, 2092
MluI ACGCGT 1 cut(s) 345
MmeI TCCRAC 2 cut(s) 910, 1892
MroXI GAANNNNTTC 2 cut(s) 809, 1752
MseI TTAA 8 cut(s) 24, 309, 510, 891, 983, 1038, 1395, 1611
MslI CAYNNNNRTG 8 cut(s) 14, 147, 356, 662, 1055, 1284, 1638, 1884
MspA1I CMGCKG 2 cut(s) 676, 965
MspI CCGG 4 cut(s) 520, 833, 1142, 2141
MspR9I CCNGG 3 cut(s) 303, 520, 521
Mva1269I GAATGC 1 cut(s) 1523
MvaI CCWGG 1 cut(s) 303
MvnI CGCG 1 cut(s) 347
MwoI GCNNNNNNNGC 4 cut(s) 673, 682, 1001, 2108
NciI CCSGG 2 cut(s) 520, 521
NcoI CCATGG 1 cut(s) 12
NlaIII CATG 8 cut(s) 16, 161, 355, 581, 1060, 1535, 1802, 1883
NlaIV GGNNCC 3 cut(s) 1755, 1860, 2027
NspI RCATGY 1 cut(s) 355
OliI CACNNNNGTG 2 cut(s) 14, 147
PaeR7I CTCGAG 1 cut(s) 1658
PagI TCATGA 1 cut(s) 577
PciSI GCTCTTC 1 cut(s) 276
PcsI WCGNNNNNNNCGW 3 cut(s) 721, 1017, 1026
PctI GAATGC 1 cut(s) 1523
PdmI GAANNNNTTC 2 cut(s) 809, 1752
PfeI GAWTC 2 cut(s) 1831, 2119
PflFI GACNNNGTC 2 cut(s) 584, 2012
PkrI GCNGC 1 cut(s) 2110
Ple19I CGATCG 1 cut(s) 1229
Ppu21I YACGTR 2 cut(s) 368, 1742
PshBI ATTAAT 1 cut(s) 24
Psp6I CCWGG 1 cut(s) 301
PspFI CCCAGC 1 cut(s) 1371
PspGI CCWGG 1 cut(s) 301
PspN4I GGNNCC 3 cut(s) 1755, 1860, 2027
PspPI GGNCC 2 cut(s) 830, 1778
PspXI VCTCGAGB 1 cut(s) 1658
PsyI GACNNNGTC 2 cut(s) 584, 2012
PvuI CGATCG 1 cut(s) 1229
PvuII CAGCTG 1 cut(s) 965
RsaI GTAC 6 cut(s) 141, 209, 350, 362, 952, 1463
RsaNI GTAC 6 cut(s) 140, 208, 349, 361, 951, 1462
RseI CAYNNNNRTG 8 cut(s) 14, 147, 356, 662, 1055, 1284, 1638, 1884
SalI GTCGAC 1 cut(s) 1983
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 8 cut(s) 24, 309, 510, 891, 983, 1038, 1395, 1611
SatI GCNGC 1 cut(s) 2109
Sau96I GGNCC 2 cut(s) 830, 1778
ScaI AGTACT 1 cut(s) 952
ScrFI CCNGG 3 cut(s) 303, 520, 521
SduI GDGCHC 7 cut(s) 256, 468, 1050, 1203, 1586, 2079, 2092
SfaNI GCATC 2 cut(s) 603, 1630
Sfr274I CTCGAG 1 cut(s) 1658
SinI GGWCC 2 cut(s) 830, 1778
SlaI CTCGAG 1 cut(s) 1658
SmaI CCCGGG 1 cut(s) 521
SmiMI CAYNNNNRTG 8 cut(s) 14, 147, 356, 662, 1055, 1284, 1638, 1884
SmlI CTYRAG 2 cut(s) 1103, 1658
SmoI CTYRAG 2 cut(s) 1103, 1658
SsiI CCGC 4 cut(s) 290, 676, 1165, 1824
SspI AATATT 1 cut(s) 80
SspMI CTAG 3 cut(s) 1979, 2019, 2158
StyD4I CCNGG 3 cut(s) 301, 518, 519
StyI CCWWGG 3 cut(s) 12, 1539, 1893
TaaI ACNGT 9 cut(s) 32, 131, 146, 725, 1054, 1415, 1588, 1790, 2087
TaiI ACGT 5 cut(s) 370, 925, 930, 1739, 1744
TaqI TCGA 9 cut(s) 64, 1020, 1071, 1090, 1225, 1233, 1659, 1710, 1984
TatI WGTACW 3 cut(s) 360, 950, 1461
TfiI GAWTC 2 cut(s) 1831, 2119
Tru1I TTAA 8 cut(s) 24, 309, 510, 891, 983, 1038, 1395, 1611
Tru9I TTAA 8 cut(s) 24, 309, 510, 891, 983, 1038, 1395, 1611
TscAI CASTG 9 cut(s) 136, 151, 209, 261, 669, 1057, 1591, 2011, 2092
TseI GCWGC 1 cut(s) 2108
TspDTI ATGAA 8 cut(s) 779, 1002, 1208, 1268, 1482, 1560, 1787, 1896
TspMI CCCGGG 1 cut(s) 519
TspRI CASTG 9 cut(s) 136, 151, 209, 261, 669, 1057, 1591, 2011, 2092
Tth111I GACNNNGTC 2 cut(s) 584, 2012
VneI GTGCAC 1 cut(s) 1199
VpaK11BI GGWCC 2 cut(s) 830, 1778
VspI ATTAAT 1 cut(s) 24
XagI CCTNNNNNAGG 2 cut(s) 629, 1028
XapI RAATTY 5 cut(s) 212, 326, 1079, 1842, 1946
XceI RCATGY 1 cut(s) 355
XcmI CCANNNNNNNNNTGG 2 cut(s) 1106, 1546
XhoI CTCGAG 1 cut(s) 1658
XmaI CCCGGG 1 cut(s) 519
XmiI GTMKAC 3 cut(s) 1410, 1803, 1984
XmnI GAANNNNTTC 2 cut(s) 809, 1752
XspI CTAG 3 cut(s) 1979, 2019, 2158
ZrmI AGTACT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.