pycom11g15110

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
15599981 .. 15619314
19334 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g15110.13

Sequence Viewer

Length: 3357 bp
ATGACAGTCGTGACGCCTGCCCCTATTGATCAACCAGAGGACGAGGAGATGCTTGTCCCGCATTCGGATTTGCCCGAGAACAATCACCAACCCATGGAAGTCGTTGCACAACCTGAAACTGCTAATAATGTGGAGAACCAGCCAGTGGAGGATCGATCTCCATCATCAAGATTCACATGGAGAGTTGACAACTTTACTAGGATGAATACGAAGAAGTATTATTCAGATGTATTTGTTGTTGGCGGCTATAAATGGCGCGTGCTTATTTTTCCTAAGGGAAACAATGTGGATCATTTGTCTATGTATTTGGATGTTGCGGATTCTTCAAGTTTGCCATATGGGTGGAGTAGACATGCACAGTTTAGCTTGGGGGTTATCAATCAAATTCATAACAAGTATTCAGTACGAAAAGACACACAGCACCAGTTCAATGCGCGAGAAAGTGATTGGGGTTTTACATCCTTTATGCCTCTTAGTGAACTTTACGATCCCAGTAGAGGGTATCTTGTGAATGATACACTTATAGTTGAAGCCGAGGTTCTCGTTCGTAGGGTTGTAGATTACTGGACATATGACTCAAAAAAGGAGGCAGGTTATGTGGGGCTTAAGAACCAAGGAGCAACGTGCTACATGAACTCTCTTCTCCAGACTCTGTATCATATTCCTTATTTCAGAAAGGCTGTTTACCATATGCCCACAACCGAGAATGATTTGCCATCGCAAAGCATACCATTGGCTCTGCAGAGTCTATTTTACAAGCTCCAGTACAGTGACAATAGTGTGGCGACCAAAGAGCTTACAAAGTCTTTTGGATGGGACACATATGATTCATTTATGCAGCATGATGTGCAAGAACTCAATAGAGTTTTGTGTGAAAAACTTGAGCACAAAATGAAGGGAACTGTTGTAGAGGGAACTATACAGAAGTTATTCGAAGGACACCATATGAACTACATTGAATGCATCAATGTGGACTACAAATCTACAAGAAGGGAATCATTTTATGATCTTCAACTTGATGTCAAAGGCTGTCATGATGTTTATGCTTCCTTTGATAAGTATGTTGAAGTGGAACGTCTTGAGGGTGATAACAAGTATCATGCTGAACAGTATGGATTACAGGATGCCAAGAAAGGTGTTCTGTTCATTGACTTCCCCCCTGTGCTTCAACTTCAACTGAAACGATTTGAGTATGACTTCATGCGGGACACAATGGTGAAGATTAATGATCATTATGAGTTCCCGTTACAACTTGACCTTGATCGAGAGAATGGAAAATATTTATCGCCTGAAGCTGATAGGAGTGTTCGCAACCTTTACACACTTCACAGTGTTTTGGTGCATAGTGGTGGGGTGCACGGTGGACACTATTATGCCTTTATCAGGCCAACACTTTCCGATCAGTGGTATAAATTCGATGATGAGAGGGTCACAAAAGAAGACATAAAGAGGGCACTAGAGGAGCAGTATGGTGGTGAGGAAGAGTTACCGCAGACAAACCCTGGGTTTAATAACACTCCTTTCAAATTTACAAAATATTCAAATGCATACATGCTGGTGTACATTCGGGAAAGTGACAGAGATAAAATAATCTGCAATGTGGATGAAAAGGACATTGCTGAACATCTGAGGGAGAGGTTAAAAAAAGAACAAGAAGAAAAGGAGCACAAGAAGAAAGAAAAGGCAGAGGCACACCTGTATACTATTATAAAGGTTGCCAGGGATGAGAACCTCATGGAGCAAATTGGGAAGGATATTTATTTTGATCTTGTGGATCATGACAAAGTTAGAAGTTTTCGTATTCAGAAGCAGACTCCTTTTAACCTTTTTAAGGAGGAGGTTGCGAAAGAGTTTGGCATACCAGTGCATTTTCAGCGTTTTTGGCTGTGGGCAAAGCGTCAAAACCATACATATCGTCCTAACCGTCCATTAACGCCTATGGAGGAAACACAATCTGTTGGACAGTTGAGGGAGGTATCGAACAAGGTTCATAATGCAGAACTAAAGTTATTCTTAGAAGTAGAGCTTGGGCTGGATTTACACCCTATTGCTCCACCTGACAAGACAAAGGATGATATCCTGCTTTTCTTTAAGCTTTATGATCCAGAAAAAGAAGAATTACGATATGTTGGAAGACTTTTCGTGAAGAGTACTGGTAAGGCAGCTGAAATCTTGTCAAAATTAAATGAAATGGCTGGCTATGCTCCCGAGGAAGAGATTGACCTGTATGAGGAAATTAAGTTTGAGCCCAATGTCATGTGTGAACCCATCGATAAGAAGTTCACATTTCGTGCCTGCCAGCTTGAGGATGGAGACATTGTATGCTTTCAGAAGTCAACTTCATTTGAAGGTGAACATCTCCACTATGATGATGTCCCATCTTTTCTGGAATATGTGCACAACCGTCAAGTTGTTCACTTCCGATCCCTTGAGAAACCCAAAGAAGAGGATTTCTCCCTAGAACTGTCAAAACTCCATACCTATGATGATGTTGTGGAACGAGTAGCTCAACAACTTGGTTTGGATGATCGATCCAAACTTAGGCTTACACCGCACAACTGTTACTCACAACAACCCAAACCCCAGCCAATTAAGTATCGTGGGGTTGACCACTTGACTGATATGCTGGTCCACTACAATCAGACTTCAGATATATTGTACTATGAAGTGTTGGACATCCCTCTGCCTGAATTACAAGGTTTGAAAACTCTGAAAGTCGCATTCCATCATGCTACTAAGGAAGAAGTGGTCATTCACACCATAAGATTGCCAAAACAGAGCACTGTTGGGGATGTAATTAATGATCTTAAAACTAAGGTTGAATTGTCTCATCCGGATGCAGAACTTAGGTTGCTTGAAGTTTTCTATCACAAGATTTACAAGGTTTTTCCTCGCAGTGAAAAGATTGAGAACATAAATGATCAATACTGGACATTACGAGCTGAAGAGGTTCCTGAGGAAGAGAAAAATCTTGGTCCTAATGATCGTGTAATTCATGTATACCATTTCACTAAAGACACAGCTCAAAACCAAATGCAAATTCAAAACTTTGGGGAACCTTTTTTCTTGGTCATACATGAAGGTGAAACTTTGGCTGAAATTAAAGCTCGAGTACAAAAGAAATTACAGGTTGCAGATGAGGAGTTCGCTAAGTGGAAGTTTGCATTTATTTCCCTAGGTCGCCCAGAATATCTTCAGGACTCGGACATTGTGTCTAGTCGGTTTCAGAGAAGAGATGTCTATGGTGCTTGGGAGCAATATCTTGGGCTGGAGCACTCTGACAGTGCTCCTAAAAGATCTTATGCAGCTAATCAGAATCGTCATACATTTGAAAAGCCAGTAAAAATTTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1119

Amino Acids

131.37

Weight (kDa)

5.64

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000333)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11910 AT3G11910 AT3G11910 AT3G11910 AT5G06600 AT5G06600 AT5G06600
fragaria_vesca FvH4_3g26930 FvH4_3g39132 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220
malus_domestica MD02G1261100.v1.1 MD03G1161100.v1.1 MD07G1059900.v1.1 MD11G1177100.v1.1 MD12G1047900.v1.1 MD12G1048000.v1.1 MD12G1048400.v1.1 MD12G1048500.v1.1 MD12G1048700.v1.1 MD12G1048800.v1.1 MD12G1056200.v1.1 MD14G1046300.v1.1 MD14G1046500.v1.1 MD15G1166900.v1.1
prunus_persica Prupe.2G066200_v2.0.a1 Prupe.2G066200_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1
pyrus_communis pycom02g22320 pycom03g11340 pycom07g04580 pycom11g14290 pycom11g15110 pycom12g04110 pycom12g04140 pycom12g04160 pycom12g04210 pycom12g04220 pycom12g04230 pycom12g04290 pycom12g04320 pycom12g04330 pycom12g04350 pycom12g04360 pycom14g03880 pycom14g03900 pycom16g18750
rosa_chinensis RchiOBHm_Chr1g0324111 RchiOBHm_Chr1g0324241 RchiOBHm_Chr3g0477691 RchiOBHm_Chr5g0049371 RchiOBHm_Chr5g0070531
rosa_laevigata RLG00000008612 RLG00000023698 RLG00000034613 RLG00000036139
rosa_multiflora Rmu_co8271779.1_g000001 Rmu_sc0006187.1_g000014
rosa_roxburghii Rroxscaffold_1G00010670 Rroxscaffold_1G00030450 Rroxscaffold_1G00031950 Rroxscaffold_1G00031970 Rroxscaffold_1G00032320 Rroxscaffold_1G00055490 Rroxscaffold_2G00083610 Rroxscaffold_2G00084480 Rroxscaffold_2G00115610 Rroxscaffold_3G00261320 Rroxscaffold_4G00312220 Rroxscaffold_4G00325820 Rroxscaffold_5G00339170 Rroxscaffold_5G00364030 Rroxscaffold_6G00403750
rosa_rugosa Rorug03G0162700 Rorug03G0162800 Rorug03G0162900 Rorug05G0247700 Rorug05G0406600 Rorug05G0406800
rosa_samantha Rh1AG060300 Rh3AG213000 Rh3BG246600 Rh3CG240400 Rh3DG239700 Rh5AG324400 Rh5AG462100 Rh5BG335500 Rh5BG480200 Rh5BG480300 Rh5CG360200 Rh5CG504500 Rh5CG504600 Rh5DG347800 Rh5DG492200 Rh5DG492300
rosa_wichuraiana Rw3G019270 Rw3G026910 Rw5G030650 Rw5G032610 Rw5G043040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1709
Acc36I ACCTGC 1 cut(s) 581
AccB7I CCANNNNNTGG 2 cut(s) 94, 145
AccI GTMKAC 3 cut(s) 349, 1700, 3000
AccII CGCG 2 cut(s) 258, 436
AccIII TCCGGA 1 cut(s) 2833
AciI CCGC 6 cut(s) 59, 243, 317, 1204, 1490, 2552
AclWI GGATC 7 cut(s) 159, 297, 482, 1782, 2096, 2418, 2526
AcsI RAATTY 5 cut(s) 384, 1412, 1526, 3039, 3345
AcuI CTGAAG 4 cut(s) 1311, 2631, 2964, 3179
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 6 cut(s) 405, 767, 1562, 2152, 2660, 3114
AflII CTTAAG 1 cut(s) 605
AhdI GACNNNNNGTC 1 cut(s) 3211
AjnI CCWGG 2 cut(s) 1501, 1718
AjuI GAANNNNNNNTTGG 4 cut(s) 2010, 2042, 3024, 3056
AleI CACNNNNGTG 1 cut(s) 1214
Alw21I GWGCWC 7 cut(s) 888, 1359, 1668, 2400, 2783, 3276, 3289
Alw26I GTCTC 2 cut(s) 2307, 2832
Alw44I GTGCAC 2 cut(s) 1355, 2396
AlwI GGATC 7 cut(s) 159, 297, 482, 1782, 2096, 2418, 2526
AlwNI CAGNNNCTG 1 cut(s) 652
Ama87I CYCGRG 3 cut(s) 74, 2207, 3108
Aor13HI TCCGGA 1 cut(s) 2833
AoxI GGCC 1 cut(s) 1385
ApaLI GTGCAC 2 cut(s) 1355, 2396
ApeKI GCWGC 3 cut(s) 838, 2162, 3305
ApoI RAATTY 5 cut(s) 384, 1412, 1526, 3039, 3345
AseI ATTAAT 2 cut(s) 1224, 2799
Asp700I GAANNNNTTC 3 cut(s) 929, 2949, 3192
AspA2I CCTAGG 1 cut(s) 3175
AspLEI GCGC 2 cut(s) 258, 436
AspS9I GGNCC 2 cut(s) 2629, 2975
AsuHPI GGTGA 6 cut(s) 77, 1097, 1228, 1487, 2363, 3095
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 3 cut(s) 74, 2207, 3108
AvaII GGWCC 2 cut(s) 2629, 2975
AvrII CCTAGG 1 cut(s) 3175
AxyI CCTNAGG 2 cut(s) 273, 2955
BaeGI GKGCMC 3 cut(s) 1359, 1456, 2400
BanII GRGCYC 1 cut(s) 2250
BbsI GAAGAC 2 cut(s) 1446, 2140
Bbv12I GWGCWC 7 cut(s) 888, 1359, 1668, 2400, 2783, 3276, 3289
BbvI GCAGC 3 cut(s) 850, 2174, 3317
BccI CCATC 7 cut(s) 169, 724, 807, 2276, 2303, 2386, 2733
BciT130I CCWGG 2 cut(s) 1503, 1720
BclI TGATCA 3 cut(s) 28, 1228, 2920
BcoDI GTCTC 2 cut(s) 2307, 2832
BfaI CTAG 6 cut(s) 198, 1457, 2459, 3176, 3216, 3355
BfmI CTRYAG 1 cut(s) 740
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 581
BglII AGATCT 1 cut(s) 3296
BisI GCNGC 4 cut(s) 244, 839, 2163, 3306
BlnI CCTAGG 1 cut(s) 3175
BlsI GCNGC 4 cut(s) 245, 840, 2164, 3307
BmcAI AGTACT 1 cut(s) 2152
Bme1390I CCNGG 2 cut(s) 1503, 1720
Bme18I GGWCC 2 cut(s) 2629, 2975
BmeRI GACNNNNNGTC 1 cut(s) 3211
BmeT110I CYCGRG 3 cut(s) 74, 2207, 3108
BmgT120I GGNCC 2 cut(s) 2629, 2975
BmiI GGNNCC 2 cut(s) 2952, 3057
BmrFI CCNGG 2 cut(s) 1503, 1720
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 4 cut(s) 39, 972, 1114, 2827
BmuI ACTGGG 1 cut(s) 486
BpiI GAAGAC 2 cut(s) 1446, 2140
BplI GAGNNNNNCTC 2 cut(s) 2438, 2470
BpmI CTGGAG 3 cut(s) 629, 746, 3290
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 4 cut(s) 902, 1100, 2324, 2450
Bsa29I ATCGAT 3 cut(s) 154, 2271, 2530
BsaBI GATNNNNATC 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 8 cut(s) 93, 534, 613, 1501, 1502, 1719, 2208, 3175
BsaWI WCCGGW 1 cut(s) 2833
BsaXI ACNNNNNCTCC 2 cut(s) 2304, 2334
Bse1I ACTGG 9 cut(s) 143, 424, 492, 569, 763, 1862, 2158, 2933, 3338
Bse21I CCTNAGG 2 cut(s) 273, 2955
Bse3DI GCAATG 2 cut(s) 1603, 1614
Bse8I GATNNNNATC 1 cut(s) 160
BseAI TCCGGA 1 cut(s) 2833
BseBI CCWGG 2 cut(s) 1503, 1720
BseCI ATCGAT 3 cut(s) 154, 2271, 2530
BseDI CCNNGG 8 cut(s) 93, 534, 613, 1501, 1502, 1719, 2208, 3175
BseJI GATNNNNATC 1 cut(s) 160
BseMI GCAATG 2 cut(s) 1603, 1614
BseMII CTCAG 2 cut(s) 1619, 2946
BseNI ACTGG 9 cut(s) 143, 424, 492, 569, 763, 1862, 2158, 2933, 3338
BseRI GAGGAG 4 cut(s) 59, 1475, 1850, 3155
BseSI GKGCMC 3 cut(s) 1359, 1456, 2400
BseXI GCAGC 3 cut(s) 850, 2174, 3317
BseYI CCCAGC 1 cut(s) 2583
Bsh1236I CGCG 2 cut(s) 258, 436
BshFI GGCC 1 cut(s) 1387
BshVI ATCGAT 3 cut(s) 154, 2271, 2530
BsiHKAI GWGCWC 7 cut(s) 888, 1359, 1668, 2400, 2783, 3276, 3289
BsiHKCI CYCGRG 3 cut(s) 74, 2207, 3108
BsiSI CCGG 1 cut(s) 2834
BslFI GGGAC 4 cut(s) 41, 830, 1220, 2360
BsmAI GTCTC 2 cut(s) 2307, 2832
BsmFI GGGAC 4 cut(s) 41, 830, 1220, 2360
BsmI GAATGC 3 cut(s) 61, 965, 2720
BsnI GGCC 1 cut(s) 1387
BsoBI CYCGRG 3 cut(s) 74, 2207, 3108
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 9 cut(s) 888, 1359, 1456, 1668, 2250, 2400, 2783, 3276, 3289
Bsp13I TCCGGA 1 cut(s) 2833
Bsp1407I TGTACA 1 cut(s) 1560
Bsp19I CCATGG 1 cut(s) 93
BspACI CCGC 6 cut(s) 59, 243, 317, 1204, 1490, 2552
BspANI GGCC 1 cut(s) 1387
BspCNI CTCAG 2 cut(s) 1620, 2947
BspDI ATCGAT 3 cut(s) 154, 2271, 2530
BspEI TCCGGA 1 cut(s) 2833
BspFNI CGCG 2 cut(s) 258, 436
BspHI TCATGA 2 cut(s) 1033, 1777
BspLI GGNNCC 2 cut(s) 2952, 3057
BspMAI CTGCAG 1 cut(s) 744
BspMI ACCTGC 1 cut(s) 581
BspPI GGATC 7 cut(s) 159, 297, 482, 1782, 2096, 2418, 2526
BspT104I TTCGAA 1 cut(s) 933
BspTI CTTAAG 1 cut(s) 605
BsrDI GCAATG 2 cut(s) 1603, 1614
BsrGI TGTACA 1 cut(s) 1560
BsrI ACTGG 9 cut(s) 143, 424, 492, 569, 763, 1862, 2158, 2933, 3338
BssECI CCNNGG 8 cut(s) 93, 534, 613, 1501, 1502, 1719, 2208, 3175
BssNAI GTATAC 2 cut(s) 1701, 3001
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 3 cut(s) 93, 613, 3175
Bst1107I GTATAC 2 cut(s) 1701, 3001
Bst2UI CCWGG 2 cut(s) 1503, 1720
Bst6I CTCTTC 8 cut(s) 645, 1476, 2141, 2208, 2439, 2940, 2955, 3226
BstACI GRCGYC 1 cut(s) 14
BstAFI CTTAAG 1 cut(s) 605
BstAPI GCANNNNNTGC 1 cut(s) 847
BstAUI TGTACA 1 cut(s) 1560
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 5 cut(s) 18, 260, 2197, 2296, 2300
BstDSI CCRYGG 1 cut(s) 93
BstENI CCTNNNNNAGG 3 cut(s) 1381, 1829, 2228
BstFNI CGCG 2 cut(s) 258, 436
BstHHI GCGC 2 cut(s) 258, 436
BstMAI GTCTC 2 cut(s) 2307, 2832
BstMWI GCNNNNNNNGC 6 cut(s) 58, 847, 1873, 1882, 2201, 2551
BstNI CCWGG 2 cut(s) 1503, 1720
BstNSI RCATGY 2 cut(s) 356, 1555
BstSCI CCNGG 2 cut(s) 1501, 1718
BstSFI CTRYAG 1 cut(s) 740
BstSLI GKGCMC 3 cut(s) 1359, 1456, 2400
BstUI CGCG 2 cut(s) 258, 436
BstV1I GCAGC 3 cut(s) 850, 2174, 3317
BstV2I GAAGAC 2 cut(s) 1446, 2140
BstX2I RGATCY 1 cut(s) 3296
BstXI CCANNNNNNTGG 1 cut(s) 342
BstYI RGATCY 1 cut(s) 3296
BstZ17I GTATAC 2 cut(s) 1701, 3001
Bsu15I ATCGAT 3 cut(s) 154, 2271, 2530
Bsu36I CCTNAGG 2 cut(s) 273, 2955
BsuRI GGCC 1 cut(s) 1387
BsuTUI ATCGAT 3 cut(s) 154, 2271, 2530
BtgI CCRYGG 1 cut(s) 93
BtgZI GCGATG 1 cut(s) 702
BtsI GCAGTG 1 cut(s) 2902
BtsIMutI CAGTG 8 cut(s) 150, 775, 1336, 1409, 1869, 2781, 2902, 3289
BveI ACCTGC 1 cut(s) 581
Cac8I GCNNGC 5 cut(s) 18, 260, 2197, 2296, 2300
CaiI CAGNNNCTG 1 cut(s) 652
CciI TCATGA 2 cut(s) 1033, 1777
CfoI GCGC 2 cut(s) 258, 436
Cfr13I GGNCC 2 cut(s) 2629, 2975
ClaI ATCGAT 3 cut(s) 154, 2271, 2530
CseI GACGC 2 cut(s) 22, 1886
Csp6I GTAC 6 cut(s) 404, 766, 1561, 2151, 2659, 3113
CviQI GTAC 6 cut(s) 404, 766, 1561, 2151, 2659, 3113
DriI GACNNNNNGTC 1 cut(s) 3211
Eam1104I CTCTTC 8 cut(s) 645, 1476, 2141, 2208, 2439, 2940, 2955, 3226
Eam1105I GACNNNNNGTC 1 cut(s) 3211
EarI CTCTTC 8 cut(s) 645, 1476, 2141, 2208, 2439, 2940, 2955, 3226
Eco130I CCWWGG 3 cut(s) 93, 613, 3175
Eco24I GRGCYC 1 cut(s) 2250
Eco32I GATATC 1 cut(s) 2077
Eco47I GGWCC 2 cut(s) 2629, 2975
Eco57I CTGAAG 4 cut(s) 1311, 2631, 2964, 3179
Eco81I CCTNAGG 2 cut(s) 273, 2955
Eco88I CYCGRG 3 cut(s) 74, 2207, 3108
EcoNI CCTNNNNNAGG 3 cut(s) 1381, 1829, 2228
EcoRII CCWGG 2 cut(s) 1501, 1718
EcoRV GATATC 1 cut(s) 2077
EcoT14I CCWWGG 3 cut(s) 93, 613, 3175
EcoT22I ATGCAT 2 cut(s) 965, 1549
EcoT38I GRGCYC 1 cut(s) 2250
ErhI CCWWGG 3 cut(s) 93, 613, 3175
FalI AAGNNNNNCTT 4 cut(s) 1997, 2029, 2010, 2042
FaqI GGGAC 4 cut(s) 41, 830, 1220, 2360
FauI CCCGC 2 cut(s) 66, 1197
FauNDI CATATG 5 cut(s) 337, 571, 690, 823, 945
FbaI TGATCA 3 cut(s) 28, 1228, 2920
FblI GTMKAC 3 cut(s) 349, 1700, 3000
Fnu4HI GCNGC 4 cut(s) 244, 839, 2163, 3306
FriOI GRGCYC 1 cut(s) 2250
Fsp4HI GCNGC 4 cut(s) 244, 839, 2163, 3306
FspBI CTAG 6 cut(s) 198, 1457, 2459, 3176, 3216, 3355
GlaI GCGC 2 cut(s) 257, 435
GluI GCNGC 4 cut(s) 244, 839, 2163, 3306
GsaI CCCAGC 1 cut(s) 2587
GsuI CTGGAG 3 cut(s) 629, 746, 3290
HaeIII GGCC 1 cut(s) 1387
HapII CCGG 1 cut(s) 2834
HgaI GACGC 2 cut(s) 22, 1886
HhaI GCGC 2 cut(s) 258, 436
Hin1I GRCGYC 1 cut(s) 14
Hin6I GCGC 2 cut(s) 256, 434
HinP1I GCGC 2 cut(s) 256, 434
HincII GTYRAC 3 cut(s) 187, 2337, 2608
HindII GTYRAC 3 cut(s) 187, 2337, 2608
HindIII AAGCTT 1 cut(s) 2093
HpaII CCGG 1 cut(s) 2834
HphI GGTGA 6 cut(s) 77, 1097, 1228, 1487, 2363, 3095
HpyAV CCTTC 6 cut(s) 889, 929, 984, 1744, 2342, 3074
HpyCH4IV ACGT 2 cut(s) 623, 1075
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 847, 1873, 1882, 2201, 2551
HpySE526I ACGT 2 cut(s) 623, 1075
Hsp92I GRCGYC 1 cut(s) 14
HspAI GCGC 2 cut(s) 256, 434
Kpn2I TCCGGA 1 cut(s) 2833
Ksp22I TGATCA 3 cut(s) 28, 1228, 2920
Lsp1109I GCAGC 3 cut(s) 850, 2174, 3317
LweI GCATC 4 cut(s) 39, 972, 1114, 2827
MaeI CTAG 6 cut(s) 198, 1457, 2459, 3176, 3216, 3355
MaeII ACGT 2 cut(s) 623, 1075
MaeIII GTNAC 7 cut(s) 10, 770, 1245, 1429, 1485, 1574, 2561
MflI RGATCY 1 cut(s) 3296
MhlI GDGCHC 9 cut(s) 888, 1359, 1456, 1668, 2250, 2400, 2783, 3276, 3289
MlyI GAGTC 5 cut(s) 569, 643, 754, 1807, 3194
MmeI TCCRAC 3 cut(s) 1939, 2110, 2652
Mph1103I ATGCAT 2 cut(s) 965, 1549
MroI TCCGGA 1 cut(s) 2833
MroXI GAANNNNTTC 3 cut(s) 929, 2949, 3192
MspA1I CMGCKG 1 cut(s) 2165
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 1 cut(s) 2834
MspR9I CCNGG 2 cut(s) 1503, 1720
Mva1269I GAATGC 3 cut(s) 61, 965, 2720
MvaI CCWGG 2 cut(s) 1503, 1720
MvnI CGCG 2 cut(s) 258, 436
MwoI GCNNNNNNNGC 6 cut(s) 58, 847, 1873, 1882, 2201, 2551
NcoI CCATGG 1 cut(s) 93
NdeI CATATG 5 cut(s) 337, 571, 690, 823, 945
NlaIV GGNNCC 2 cut(s) 2952, 3057
NmeAIII GCCGAG 1 cut(s) 559
NmuCI GTSAC 4 cut(s) 10, 770, 1429, 1574
NsiI ATGCAT 2 cut(s) 965, 1549
NspI RCATGY 2 cut(s) 356, 1555
NspV TTCGAA 1 cut(s) 933
OliI CACNNNNGTG 1 cut(s) 1214
PaeR7I CTCGAG 1 cut(s) 3108
PagI TCATGA 2 cut(s) 1033, 1777
PasI CCCWGGG 1 cut(s) 1502
PcsI WCGNNNNNNNCGW 1 cut(s) 1921
PctI GAATGC 3 cut(s) 61, 965, 2720
PdmI GAANNNNTTC 3 cut(s) 929, 2949, 3192
PfeI GAWTC 5 cut(s) 171, 320, 827, 995, 3316
PflMI CCANNNNNTGG 2 cut(s) 94, 145
PkrI GCNGC 4 cut(s) 245, 840, 2164, 3307
PleI GAGTC 5 cut(s) 569, 643, 753, 1807, 3194
PpsI GAGTC 5 cut(s) 569, 643, 753, 1807, 3194
PshBI ATTAAT 2 cut(s) 1224, 2799
PsiI TTATAA 1 cut(s) 1709
Psp6I CCWGG 2 cut(s) 1501, 1718
PspFI CCCAGC 1 cut(s) 2583
PspGI CCWGG 2 cut(s) 1501, 1718
PspN4I GGNNCC 2 cut(s) 2952, 3057
PspPI GGNCC 2 cut(s) 2629, 2975
PspXI VCTCGAGB 1 cut(s) 3108
PstI CTGCAG 1 cut(s) 744
PstNI CAGNNNCTG 1 cut(s) 652
PsuI RGATCY 1 cut(s) 3296
PvuII CAGCTG 1 cut(s) 2165
RsaI GTAC 6 cut(s) 405, 767, 1562, 2152, 2660, 3114
RsaNI GTAC 6 cut(s) 404, 766, 1561, 2151, 2659, 3113
SatI GCNGC 4 cut(s) 244, 839, 2163, 3306
Sau96I GGNCC 2 cut(s) 2629, 2975
ScaI AGTACT 1 cut(s) 2152
SchI GAGTC 5 cut(s) 569, 643, 754, 1807, 3194
ScrFI CCNGG 2 cut(s) 1503, 1720
SduI GDGCHC 9 cut(s) 888, 1359, 1456, 1668, 2250, 2400, 2783, 3276, 3289
SfaNI GCATC 4 cut(s) 39, 972, 1114, 2827
SfcI CTRYAG 1 cut(s) 740
Sfr274I CTCGAG 1 cut(s) 3108
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 2 cut(s) 2629, 2975
SlaI CTCGAG 1 cut(s) 3108
SmlI CTYRAG 6 cut(s) 605, 881, 1079, 2303, 2429, 3108
SmoI CTYRAG 6 cut(s) 605, 881, 1079, 2303, 2429, 3108
SsiI CCGC 6 cut(s) 59, 243, 317, 1204, 1490, 2552
SspI AATATT 2 cut(s) 1280, 1538
SspMI CTAG 6 cut(s) 198, 1457, 2459, 3176, 3216, 3355
StyD4I CCNGG 2 cut(s) 1501, 1718
StyI CCWWGG 3 cut(s) 93, 613, 3175
TaiI ACGT 2 cut(s) 626, 1078
TaqI TCGA 8 cut(s) 154, 933, 1264, 1416, 1979, 2271, 2530, 3109
TatI WGTACW 5 cut(s) 765, 1560, 2150, 2658, 3112
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 5 cut(s) 171, 320, 827, 995, 3316
TscAI CASTG 8 cut(s) 150, 775, 1336, 1409, 1869, 2788, 2902, 3289
TseFI GTSAC 4 cut(s) 10, 770, 1429, 1574
TseI GCWGC 3 cut(s) 838, 2162, 3305
Tsp45I GTSAC 4 cut(s) 10, 770, 1429, 1574
TspRI CASTG 8 cut(s) 150, 775, 1336, 1409, 1869, 2788, 2902, 3289
Van91I CCANNNNNTGG 2 cut(s) 94, 145
Vha464I CTTAAG 1 cut(s) 605
VneI GTGCAC 2 cut(s) 1355, 2396
VpaK11BI GGWCC 2 cut(s) 2629, 2975
VspI ATTAAT 2 cut(s) 1224, 2799
XagI CCTNNNNNAGG 3 cut(s) 1381, 1829, 2228
XapI RAATTY 5 cut(s) 384, 1412, 1526, 3039, 3345
XceI RCATGY 2 cut(s) 356, 1555
XcmI CCANNNNNNNNNTGG 1 cut(s) 2306
XhoI CTCGAG 1 cut(s) 3108
XmaJI CCTAGG 1 cut(s) 3175
XmiI GTMKAC 3 cut(s) 349, 1700, 3000
XmnI GAANNNNTTC 3 cut(s) 929, 2949, 3192
XspI CTAG 6 cut(s) 198, 1457, 2459, 3176, 3216, 3355
ZrmI AGTACT 1 cut(s) 2152
Zsp2I ATGCAT 2 cut(s) 965, 1549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.