pycom12g04210

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
4108656 .. 4113370
4715 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g04210.1

Sequence Viewer

Length: 1992 bp
ATGTCTTCTTTATTCTTTTTTACCATTTGGGGTCATGACCTTGCGAAAGAGTTTGGCATACCAGTGCAGTTTCAACGTTTCTGGATTTGGGCCAAGAGACAAAATCACACATATCGCCCCAACCGACCATTGACACCTCAGGAAGAAACACAATCAGTGCTTTATGCAAAGCTAATGATGACCGCTTGCATTTTTCAGGTTGGACAATTGATAGAGGTATCAAATAAAACACACAATGCAGAGCTAAGGTTGTTTCTGGAATTAGAGTTTGGGCCGGATCTACGTCCTATTCCTCCGCCTGACAAAACCAAGGAAGATATCCTTCTTTTCTTTAAGCTTTATGAGCCTGAGAAACGAGAACTACGGTACCTCCTGCTCTTTCTTTTTGTTGGTAGGTTTTTCGTGAAGAGTTGTAGTAAACCAGCAGAGATTTTAGGAAAATTAAATCAACTGGCTGGTTTTACCCCTGATGAAGAAATTGAGCTTTATGAGGAACTAAAGTTTGAGCCTTGTGTCATGTGCGAACACCTTGACAAGAGGACCTCATTTCGATTAAGTCAGATTGAAGATGGGGATATTATTTGCTTTCAGAAGTCTACTCCCCTTGAAAGTGAAGAAGAATGTAAATATCCTGATGCTCCTTCATTTTTGGAATACGTACACAATCGCCAGGTTGTTCATTTCCGTTCTTTGGAGAAACCTAAGGAGGAGGATTTCAGTTTAGAATTGTCAAAGCTACACACTTACGATGACGTGGTGGAGAAATTGGCTCACCAAATTGGTTTGGAAGATCCCACCAAAATCAGACTCACTGCTCATAACTGCTATTCTCAGCAACCTAAGCCCGAACCAATTAAATTTTGGGGTGTAGAGTATTTAACTGATATGTTAGTTCATTACAATAAAGTAGGTGGCACTGTATTGCCCTTCCTCTGTTTAATTCACTCTCATAAGCATCATGTGGTGTGGCTACTAATTATGCTTCTTGTTTCCTTTTACAGAGCTCTGATATTTTGTATTATGAAGTCTTGGACATCCCCCTGCCAGAATTGCAAGGTGGTGATTCACAATATTAGATTGCTCAAACAGAGCACTGTGGGGGATGTCATTAATGTACTTAAAACGAAGGGTAATTATTTGTATGTCAGCTGTGTCAGGTACATGATTCAACCTTACATTTGTTGGAACGTTACAGGAGGAAAAGATTGTTTTACCTTTAGAATTAATGGTTTTTTATTTTGCTGCTCATCCATTTCCCTTGTGGTTGCGCAGTGGAAGTTTGCTTTCTTGTCACTTGGTCGTCCTGAGTACTTGCAGGATTCTGATGTTGTTTCCAGCCACGACGCTCTTCCGATCTTTTCAGATGTTTATGCTGCATGGGAGCAGTACCTTGGGTTGGAGCACTCTGATAAAACTCCTAAGAGGGCTCACGCAGCAAATCAAAGTAGAGATAAATATGCTGCATGGGAGCAGTACCTTGGGTTGCAGCACTCTGATAAAGCTCCTAAGAGGGCTCGCGCGGCAAATCAAGCAAGTGCTGTTGTAAATATCTCTTTTCCAACCACTATGGGCCATGCAGAACCAACTCCACAAGAAGACGCTGCCCTAGTAACCTTAGAGTCCATAGCGTCTAATGTCAGCCATGAGACAGCAAGCAGAGAAATTGAAATGCAAAATGATGACCTGGATGGCCCTGCTTCTCCAGCAGTTGATCGATCTCTGAGAAGACTTTCTGCTGCAGAGGATCTATTGAAGTCCACTTCAGCCAGAGAACCATCATTAGAGGCTTTGGCTGCATTAGACACTGTGAGCCGCTATGCAAGGAGGAGCCTAGACACTCTCAGCACGAATGGGGCATATGAGGAGTTCAAAGCAGCCTTGAAACTCTTGACTGAACAAGGGATGATCCATTCAACGATCGCTTCCTCGAGATGCTCAAGGATCTTCTTTCGTCTTTGGAGGGTGAAATGCCGAAGTACATGGCTGCAGTAA

Protein Analysis

664

Amino Acids

76.22

Weight (kDa)

6.63

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
USP7_ICP0_bdg PF12436 25 - 297 8.1e-66 ICP0-binding domain of Ubiquitin-specific protease 7
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000333)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11910 AT3G11910 AT3G11910 AT3G11910 AT5G06600 AT5G06600 AT5G06600
fragaria_vesca FvH4_3g26930 FvH4_3g39132 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220
malus_domestica MD02G1261100.v1.1 MD03G1161100.v1.1 MD07G1059900.v1.1 MD11G1177100.v1.1 MD12G1047900.v1.1 MD12G1048000.v1.1 MD12G1048400.v1.1 MD12G1048500.v1.1 MD12G1048700.v1.1 MD12G1048800.v1.1 MD12G1056200.v1.1 MD14G1046300.v1.1 MD14G1046500.v1.1 MD15G1166900.v1.1
prunus_persica Prupe.2G066200_v2.0.a1 Prupe.2G066200_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1
pyrus_communis pycom02g22320 pycom03g11340 pycom07g04580 pycom11g14290 pycom11g15110 pycom12g04110 pycom12g04140 pycom12g04160 pycom12g04210 pycom12g04220 pycom12g04230 pycom12g04290 pycom12g04320 pycom12g04330 pycom12g04350 pycom12g04360 pycom14g03880 pycom14g03900 pycom16g18750
rosa_chinensis RchiOBHm_Chr1g0324111 RchiOBHm_Chr1g0324241 RchiOBHm_Chr3g0477691 RchiOBHm_Chr5g0049371 RchiOBHm_Chr5g0070531
rosa_laevigata RLG00000008612 RLG00000023698 RLG00000034613 RLG00000036139
rosa_multiflora Rmu_co8271779.1_g000001 Rmu_sc0006187.1_g000014
rosa_roxburghii Rroxscaffold_1G00010670 Rroxscaffold_1G00030450 Rroxscaffold_1G00031950 Rroxscaffold_1G00031970 Rroxscaffold_1G00032320 Rroxscaffold_1G00055490 Rroxscaffold_2G00083610 Rroxscaffold_2G00084480 Rroxscaffold_2G00115610 Rroxscaffold_3G00261320 Rroxscaffold_4G00312220 Rroxscaffold_4G00325820 Rroxscaffold_5G00339170 Rroxscaffold_5G00364030 Rroxscaffold_6G00403750
rosa_rugosa Rorug03G0162700 Rorug03G0162800 Rorug03G0162900 Rorug05G0247700 Rorug05G0406600 Rorug05G0406800
rosa_samantha Rh1AG060300 Rh3AG213000 Rh3BG246600 Rh3CG240400 Rh3DG239700 Rh5AG324400 Rh5AG462100 Rh5BG335500 Rh5BG480200 Rh5BG480300 Rh5CG360200 Rh5CG504500 Rh5CG504600 Rh5DG347800 Rh5DG492200 Rh5DG492300
rosa_wichuraiana Rw3G019270 Rw3G026910 Rw5G030650 Rw5G032610 Rw5G043040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1269
Acc65I GGTACC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 366
AccI GTMKAC 1 cut(s) 596
AccII CGCG 2 cut(s) 1518, 1520
AciI CCGC 4 cut(s) 183, 296, 1520, 1813
AclI AACGTT 2 cut(s) 76, 1188
AclWI GGATC 5 cut(s) 285, 785, 1752, 1900, 1949
AcsI RAATTY 1 cut(s) 857
AcuI CTGAAG 1 cut(s) 1746
AfaI GTAC 8 cut(s) 368, 660, 1116, 1160, 1310, 1388, 1475, 1978
AfiI CCNNNNNNNGG 2 cut(s) 691, 1396
AgsI TTSAA 9 cut(s) 74, 566, 608, 1169, 1667, 1753, 1870, 1882, 1914
AjiI CACGTC 1 cut(s) 754
AjnI CCWGG 2 cut(s) 669, 1683
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
AluBI AGCT 8 cut(s) 172, 244, 337, 484, 736, 1004, 1149, 1502
AluI AGCT 8 cut(s) 172, 244, 337, 484, 736, 1004, 1149, 1502
Alw21I GWGCWC 3 cut(s) 1006, 1094, 1404
Alw26I GTCTC 2 cut(s) 91, 1640
AlwI GGATC 5 cut(s) 285, 785, 1752, 1900, 1949
Ama87I CYCGRG 1 cut(s) 1927
AoxI GGCC 4 cut(s) 90, 272, 1570, 1690
ApoI RAATTY 1 cut(s) 857
AseI ATTAAT 2 cut(s) 1110, 1224
Asp700I GAANNNNTTC 1 cut(s) 1729
Asp718I GGTACC 1 cut(s) 366
AspLEI GCGC 2 cut(s) 1270, 1520
AspS9I GGNCC 5 cut(s) 90, 272, 540, 1570, 1691
AsuHPI GGTGA 3 cut(s) 764, 1072, 1975
AvaI CYCGRG 1 cut(s) 1927
AvaII GGWCC 1 cut(s) 540
AxyI CCTNAGG 2 cut(s) 138, 702
BaeI ACNNNNGTAYC 2 cut(s) 350, 383
BanI GGYRCC 1 cut(s) 366
BanII GRGCYC 3 cut(s) 1006, 1429, 1516
BbsI GAAGAC 2 cut(s) 1602, 1732
Bbv12I GWGCWC 3 cut(s) 1006, 1094, 1404
BccI CCATC 3 cut(s) 563, 1682, 1783
BciT130I CCWGG 2 cut(s) 671, 1685
BcoDI GTCTC 2 cut(s) 91, 1640
BfaI CTAG 2 cut(s) 1607, 1832
BfmI CTRYAG 2 cut(s) 1737, 1985
BmcAI AGTACT 1 cut(s) 1310
Bme1390I CCNGG 2 cut(s) 671, 1685
Bme18I GGWCC 1 cut(s) 540
BmeT110I CYCGRG 1 cut(s) 1927
BmgBI CACGTC 1 cut(s) 754
BmgT120I GGNCC 5 cut(s) 90, 272, 540, 1570, 1691
BmiI GGNNCC 2 cut(s) 368, 1829
BmrFI CCNGG 2 cut(s) 671, 1685
BmsI GCATC 3 cut(s) 625, 964, 1922
BpiI GAAGAC 2 cut(s) 1602, 1732
BpmI CTGGAG 1 cut(s) 1686
Bpu10I CCTNAGC 2 cut(s) 245, 840
BpuEI CTTGAG 1 cut(s) 1921
Bsa29I ATCGAT 1 cut(s) 1714
BsaAI YACGTR 1 cut(s) 658
BsaJI CCNNGG 3 cut(s) 309, 1390, 1477
BsaXI ACNNNNNCTCC 2 cut(s) 354, 384
Bsc4I CCNNNNNNNGG 2 cut(s) 691, 1396
Bse1I ACTGG 2 cut(s) 62, 456
Bse21I CCTNAGG 2 cut(s) 138, 702
BseBI CCWGG 2 cut(s) 671, 1685
BseCI ATCGAT 1 cut(s) 1714
BseDI CCNNGG 3 cut(s) 309, 1390, 1477
BseGI GGATG 5 cut(s) 1034, 1108, 1247, 1693, 1908
BseLI CCNNNNNNNGG 2 cut(s) 691, 1396
BseMII CTCAG 6 cut(s) 152, 339, 845, 1296, 1712, 1855
BseNI ACTGG 2 cut(s) 62, 456
BseRI GAGGAG 3 cut(s) 722, 1840, 1877
BsgI GTGCAG 1 cut(s) 86
Bsh1236I CGCG 2 cut(s) 1518, 1520
Bsh1285I CGRYCG 1 cut(s) 1920
BshFI GGCC 4 cut(s) 92, 274, 1572, 1692
BshNI GGYRCC 1 cut(s) 366
BshVI ATCGAT 1 cut(s) 1714
BsiEI CGRYCG 1 cut(s) 1920
BsiHKAI GWGCWC 3 cut(s) 1006, 1094, 1404
BsiHKCI CYCGRG 1 cut(s) 1927
BsiSI CCGG 1 cut(s) 275
BslI CCNNNNNNNGG 2 cut(s) 691, 1396
BsmAI GTCTC 2 cut(s) 91, 1640
BsnI GGCC 4 cut(s) 92, 274, 1572, 1692
BsoBI CYCGRG 1 cut(s) 1927
Bsp1286I GDGCHC 5 cut(s) 1006, 1094, 1404, 1429, 1516
Bsp143I GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
BspACI CCGC 4 cut(s) 183, 296, 1520, 1813
BspANI GGCC 4 cut(s) 92, 274, 1572, 1692
BspCNI CTCAG 6 cut(s) 151, 340, 844, 1297, 1713, 1854
BspDI ATCGAT 1 cut(s) 1714
BspFNI CGCG 2 cut(s) 1518, 1520
BspHI TCATGA 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 368, 1829
BspMAI CTGCAG 2 cut(s) 1741, 1989
BspPI GGATC 5 cut(s) 285, 785, 1752, 1900, 1949
BspQI GCTCTTC 1 cut(s) 1353
BspT107I GGYRCC 1 cut(s) 366
BsrI ACTGG 2 cut(s) 62, 456
BssECI CCNNGG 3 cut(s) 309, 1390, 1477
BssMI GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
BssT1I CCWWGG 3 cut(s) 309, 1390, 1477
Bst2UI CCWGG 2 cut(s) 671, 1685
Bst4CI ACNGT 4 cut(s) 366, 919, 1096, 1807
Bst6I CTCTTC 2 cut(s) 401, 1353
BstBAI YACGTR 1 cut(s) 658
BstC8I GCNNGC 3 cut(s) 187, 1516, 1654
BstF5I GGATG 5 cut(s) 1034, 1108, 1247, 1693, 1908
BstFNI CGCG 2 cut(s) 1518, 1520
BstHHI GCGC 2 cut(s) 1270, 1520
BstKTI GATC 9 cut(s) 280, 793, 1356, 1714, 1718, 1747, 1908, 1920, 1944
BstMAI GTCTC 2 cut(s) 91, 1640
BstMBI GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
BstMCI CGRYCG 1 cut(s) 1920
BstMWI GCNNNNNNNGC 8 cut(s) 343, 841, 1050, 1433, 1520, 1529, 1703, 1793
BstNI CCWGG 2 cut(s) 671, 1685
BstSCI CCNGG 2 cut(s) 669, 1683
BstSFI CTRYAG 2 cut(s) 1737, 1985
BstSNI TACGTA 1 cut(s) 658
BstUI CGCG 2 cut(s) 1518, 1520
BstV2I GAAGAC 2 cut(s) 1602, 1732
BstX2I RGATCY 4 cut(s) 277, 790, 1744, 1941
BstYI RGATCY 4 cut(s) 277, 790, 1744, 1941
Bsu15I ATCGAT 1 cut(s) 1714
Bsu36I CCTNAGG 2 cut(s) 138, 702
BsuRI GGCC 4 cut(s) 92, 274, 1572, 1692
BsuTUI ATCGAT 1 cut(s) 1714
BtrI CACGTC 1 cut(s) 754
BtsCI GGATG 5 cut(s) 1034, 1108, 1247, 1693, 1908
BtsI GCAGTG 2 cut(s) 810, 1277
BtsIMutI CAGTG 7 cut(s) 69, 162, 810, 915, 1092, 1277, 1803
Cac8I GCNNGC 3 cut(s) 187, 1516, 1654
CciI TCATGA 1 cut(s) 34
CfoI GCGC 2 cut(s) 1270, 1520
Cfr13I GGNCC 5 cut(s) 90, 272, 540, 1570, 1691
ClaI ATCGAT 1 cut(s) 1714
CseI GACGC 3 cut(s) 1352, 1607, 1617
Csp6I GTAC 8 cut(s) 367, 659, 1115, 1159, 1309, 1387, 1474, 1977
CviAII CATG 9 cut(s) 35, 517, 959, 1162, 1377, 1464, 1574, 1643, 1980
CviQI GTAC 8 cut(s) 367, 659, 1115, 1159, 1309, 1387, 1474, 1977
DpnI GATC 9 cut(s) 279, 792, 1355, 1713, 1717, 1746, 1907, 1919, 1943
DpnII GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
Eam1104I CTCTTC 2 cut(s) 401, 1353
EarI CTCTTC 2 cut(s) 401, 1353
EciI GGCGGA 1 cut(s) 285
Ecl136II GAGCTC 1 cut(s) 1004
Eco105I TACGTA 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 309, 1390, 1477
Eco24I GRGCYC 3 cut(s) 1006, 1429, 1516
Eco32I GATATC 1 cut(s) 319
Eco47I GGWCC 1 cut(s) 540
Eco53kI GAGCTC 1 cut(s) 1004
Eco57I CTGAAG 1 cut(s) 1746
Eco81I CCTNAGG 2 cut(s) 138, 702
Eco88I CYCGRG 1 cut(s) 1927
EcoICRI GAGCTC 1 cut(s) 1004
EcoO109I RGGNCCY 1 cut(s) 540
EcoRII CCWGG 2 cut(s) 669, 1683
EcoRV GATATC 1 cut(s) 319
EcoT14I CCWWGG 3 cut(s) 309, 1390, 1477
EcoT38I GRGCYC 3 cut(s) 1006, 1429, 1516
ErhI CCWWGG 3 cut(s) 309, 1390, 1477
FaeI CATG 9 cut(s) 38, 520, 962, 1165, 1380, 1467, 1577, 1646, 1983
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FatI CATG 9 cut(s) 34, 516, 958, 1161, 1376, 1463, 1573, 1642, 1979
FauNDI CATATG 1 cut(s) 1858
FblI GTMKAC 1 cut(s) 596
FokI GGATG 5 cut(s) 1021, 1115, 1234, 1700, 1915
FriOI GRGCYC 3 cut(s) 1006, 1429, 1516
FspBI CTAG 2 cut(s) 1607, 1832
FspI TGCGCA 1 cut(s) 1269
GlaI GCGC 2 cut(s) 1269, 1519
GsuI CTGGAG 1 cut(s) 1686
HaeIII GGCC 4 cut(s) 92, 274, 1572, 1692
HapII CCGG 1 cut(s) 275
HgaI GACGC 3 cut(s) 1352, 1607, 1617
HhaI GCGC 2 cut(s) 1270, 1520
Hin1II CATG 9 cut(s) 38, 520, 962, 1165, 1380, 1467, 1577, 1646, 1983
Hin6I GCGC 2 cut(s) 1268, 1518
HinP1I GCGC 2 cut(s) 1268, 1518
HindIII AAGCTT 1 cut(s) 335
HinfI GANTC 5 cut(s) 807, 1063, 1165, 1319, 1619
HpaII CCGG 1 cut(s) 275
HphI GGTGA 3 cut(s) 764, 1072, 1975
Hpy166II GTNNAC 4 cut(s) 419, 597, 661, 1758
Hpy188III TCNNGA 9 cut(s) 35, 82, 140, 257, 403, 632, 1304, 1888, 1929
Hpy8I GTNNAC 4 cut(s) 419, 597, 661, 1758
Hpy99I CGWCG 1 cut(s) 1346
HpyAV CCTTC 4 cut(s) 332, 651, 937, 1120
HpyCH4III ACNGT 4 cut(s) 366, 919, 1096, 1807
HpyCH4IV ACGT 5 cut(s) 76, 283, 657, 753, 1188
HpyF10VI GCNNNNNNNGC 8 cut(s) 343, 841, 1050, 1433, 1520, 1529, 1703, 1793
HpySE526I ACGT 5 cut(s) 76, 283, 657, 753, 1188
Hsp92II CATG 9 cut(s) 38, 520, 962, 1165, 1380, 1467, 1577, 1646, 1983
HspAI GCGC 2 cut(s) 1268, 1518
KpnI GGTACC 1 cut(s) 370
Kzo9I GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
LguI GCTCTTC 1 cut(s) 1353
LmnI GCTCC 6 cut(s) 643, 1381, 1399, 1468, 1507, 1827
LweI GCATC 3 cut(s) 625, 964, 1922
MaeI CTAG 2 cut(s) 1607, 1832
MaeII ACGT 5 cut(s) 76, 283, 657, 753, 1188
MaeIII GTNAC 3 cut(s) 1189, 1290, 1609
MalI GATC 9 cut(s) 279, 792, 1355, 1713, 1717, 1746, 1907, 1919, 1943
MboI GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
MfeI CAATTG 1 cut(s) 206
MflI RGATCY 4 cut(s) 277, 790, 1744, 1941
MhlI GDGCHC 5 cut(s) 1006, 1094, 1404, 1429, 1516
MlyI GAGTC 2 cut(s) 801, 1628
MmeI TCCRAC 4 cut(s) 181, 1163, 1377, 1583
MroXI GAANNNNTTC 1 cut(s) 1729
MseI TTAA 9 cut(s) 333, 443, 554, 855, 878, 938, 1110, 1119, 1224
MslI CAYNNNNRTG 1 cut(s) 62
MspA1I CMGCKG 1 cut(s) 1149
MspI CCGG 1 cut(s) 275
MspR9I CCNGG 2 cut(s) 671, 1685
MunI CAATTG 1 cut(s) 206
MvaI CCWGG 2 cut(s) 671, 1685
MvnI CGCG 2 cut(s) 1518, 1520
MwoI GCNNNNNNNGC 8 cut(s) 343, 841, 1050, 1433, 1520, 1529, 1703, 1793
NdeI CATATG 1 cut(s) 1858
NdeII GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
NlaIII CATG 9 cut(s) 38, 520, 962, 1165, 1380, 1467, 1577, 1646, 1983
NlaIV GGNNCC 2 cut(s) 368, 1829
NmuCI GTSAC 1 cut(s) 1290
NsbI TGCGCA 1 cut(s) 1269
PaeR7I CTCGAG 1 cut(s) 1927
PagI TCATGA 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 1353
PcsI WCGNNNNNNNCGW 1 cut(s) 121
PdmI GAANNNNTTC 1 cut(s) 1729
PfeI GAWTC 3 cut(s) 1063, 1165, 1319
Ple19I CGATCG 1 cut(s) 1920
PleI GAGTC 2 cut(s) 801, 1627
PpsI GAGTC 2 cut(s) 801, 1627
Ppu21I YACGTR 1 cut(s) 658
PpuMI RGGWCCY 1 cut(s) 540
PshBI ATTAAT 2 cut(s) 1110, 1224
Psp124BI GAGCTC 1 cut(s) 1006
Psp1406I AACGTT 2 cut(s) 76, 1188
Psp5II RGGWCCY 1 cut(s) 540
Psp6I CCWGG 2 cut(s) 669, 1683
PspGI CCWGG 2 cut(s) 669, 1683
PspN4I GGNNCC 2 cut(s) 368, 1829
PspPI GGNCC 5 cut(s) 90, 272, 540, 1570, 1691
PspPPI RGGWCCY 1 cut(s) 540
PstI CTGCAG 2 cut(s) 1741, 1989
PsuI RGATCY 4 cut(s) 277, 790, 1744, 1941
PvuI CGATCG 1 cut(s) 1920
PvuII CAGCTG 1 cut(s) 1149
RsaI GTAC 8 cut(s) 368, 660, 1116, 1160, 1310, 1388, 1475, 1978
RsaNI GTAC 8 cut(s) 367, 659, 1115, 1159, 1309, 1387, 1474, 1977
RseI CAYNNNNRTG 1 cut(s) 62
SacI GAGCTC 1 cut(s) 1006
SapI GCTCTTC 1 cut(s) 1353
SaqAI TTAA 9 cut(s) 333, 443, 554, 855, 878, 938, 1110, 1119, 1224
Sau3AI GATC 9 cut(s) 277, 790, 1353, 1711, 1715, 1744, 1905, 1917, 1941
Sau96I GGNCC 5 cut(s) 90, 272, 540, 1570, 1691
ScaI AGTACT 1 cut(s) 1310
SchI GAGTC 2 cut(s) 801, 1628
ScrFI CCNGG 2 cut(s) 671, 1685
SduI GDGCHC 5 cut(s) 1006, 1094, 1404, 1429, 1516
SfaNI GCATC 3 cut(s) 625, 964, 1922
SfcI CTRYAG 2 cut(s) 1737, 1985
Sfr274I CTCGAG 1 cut(s) 1927
SinI GGWCC 1 cut(s) 540
SlaI CTCGAG 1 cut(s) 1927
SmiMI CAYNNNNRTG 1 cut(s) 62
SmlI CTYRAG 2 cut(s) 1927, 1936
SmoI CTYRAG 2 cut(s) 1927, 1936
SnaBI TACGTA 1 cut(s) 658
SsiI CCGC 4 cut(s) 183, 296, 1520, 1813
SspI AATATT 1 cut(s) 1072
SspMI CTAG 2 cut(s) 1607, 1832
SstI GAGCTC 1 cut(s) 1006
StyD4I CCNGG 2 cut(s) 669, 1683
StyI CCWWGG 3 cut(s) 309, 1390, 1477
TaaI ACNGT 4 cut(s) 366, 919, 1096, 1807
TaiI ACGT 5 cut(s) 79, 286, 660, 756, 1191
TaqI TCGA 3 cut(s) 550, 1714, 1928
TatI WGTACW 3 cut(s) 1114, 1308, 1976
TauI GCSGC 2 cut(s) 1523, 1815
TfiI GAWTC 3 cut(s) 1063, 1165, 1319
Tru1I TTAA 9 cut(s) 333, 443, 554, 855, 878, 938, 1110, 1119, 1224
Tru9I TTAA 9 cut(s) 333, 443, 554, 855, 878, 938, 1110, 1119, 1224
TscAI CASTG 7 cut(s) 69, 162, 817, 922, 1099, 1277, 1810
TseFI GTSAC 1 cut(s) 1290
Tsp45I GTSAC 1 cut(s) 1290
TspDTI ATGAA 5 cut(s) 486, 633, 668, 884, 1037
TspGWI ACGGA 1 cut(s) 674
TspRI CASTG 7 cut(s) 69, 162, 817, 922, 1099, 1277, 1810
VpaK11BI GGWCC 1 cut(s) 540
VspI ATTAAT 2 cut(s) 1110, 1224
XapI RAATTY 1 cut(s) 857
XcmI CCANNNNNNNNNTGG 2 cut(s) 858, 1258
XhoI CTCGAG 1 cut(s) 1927
XmiI GTMKAC 1 cut(s) 596
XmnI GAANNNNTTC 1 cut(s) 1729
XspI CTAG 2 cut(s) 1607, 1832
ZrmI AGTACT 1 cut(s) 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.