pycom02g22320

Ubiquitin carboxyl-terminal hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
20443452 .. 20456085
12634 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22320.5

Sequence Viewer

Length: 2970 bp
ATGAGATCGATCGTCCCACACTCCGACCTCCCCAACGGTCCTCAGCCCATGGAGGAAGCACAAGCAGAAACCAACAGTGCAGTGGATGCTCCGGCAGTGGATGATCCATTGTCAGCTAGATTTACATGGACAATTGACCGCTTAACCATGCTTAACACCAAGAAGCTATATTCTGATGTTTTCCTTGTTGGAGGCTACAAATGGCGGATACTAATTTTCCCCAAAGGTAATAATGTGGATCATCTGTCGATGTATCTGGATGTTGCAGATTCTGGAAATTTGCCATATGGGTGGAGTAGATATGCCCAGTTTAGCTTGTCTGTTGTCAATCAAAGTCATAGTAAATACTCCATTAGAAAAGAAACACAGCACCAATTTAATGCACGTGAGAGTGACTGGGGTTTCACTTCCTTCATGCCTGTTGGTGAATTATATGACCCTGCTAGAGGTTATATTGTGAATGATATATGCATAGTTGAAGCTGATGTTGCAGTTCGAAGGGTTATTGATTACTGGTCACATGACTCTAAGAAGGAAACCGGTTCTGTTGGGCTGAAAAACCAAGGAGCTACTTGTTATATGAACTCGCTTCTTCAGACGTTGTACCATATTCCTTATTTTAGAAAGGCTGTGTACCATATGCCAACAACGGAGAATGATAATCCATCTGGAAGCATCCCATTGGCATTGCAAAGCTTATTTTACAAGCTTCAGTACAATGATACTAGTGTAGCGACCAAGGAGCTGACGAAGTCATTTGGATGGGATGCATATGATTCATTCATGCAGCATGACGTCCAAGAACTCAATAGGGTTCTTTCTGAAAAGCTTGAAGACAAGATGAAAGGAACTGTAGTGGAGGGTACAATACAGCAGTTATTTGAAGGGCACCAGATGAACTATATTGAATGCATCAATGTGGACTATAAATCAACGAGAAAAGAGTCATTTTATGATCTTCACTTGGATGTCAAAGGGTGTCGGGATGTTTATGCTTCATTCGATAAGTATGTGGAAGTGGAGCGCCTTGAGGGTGATAATAAGTATCATGCTGAACAGTATGGTTTACAGGATGCTAAGAAAGGTGTCCTGTTCATTGATTTTCCACCTGTGCTTCAACTTCAGCTAAAACGTTTCGAGTATGATTTTATGCGGGATACCATGGTAAAGATAAATGATCGCTATGAGTTCCCCTTGCAACTTGATCTTGATAGGGAGAATGGGAAATATCTTTCGCCTGATGCTGACAGGAGCGTACGCAACCTCTACACTCTTCATAGTGTTTTGGTGCACAGTGGTGGGGTGCATGGTGGGCACTACTATGCTTATATCAGGCCAACCCTTTCTGATCAGTGGTTTAAATTTGATGATGAACGAGTAACAAAAGAAGATATGAAGAGGGCTCTGGAGGAACAGTATGGTGGAGAAGAAGAGTTACCACAGACAAATCCTGGGTTCAATAATGCTCCATTTAAATTTACTAAATATTCCAATGCCTACATGCTTGTTTATATACGTGAAGTTGACAAGGAGAAAATAATTTGTAACGTGGATGAGAAAGACATTGCAGAACATCTAAGGATAAGACTGAAGAAAGAACAGGAAGAAAAGGAGCAAAAGAGAAAGGAGAAAGCTGAAGCGCACCTTTATACTATTATAAAGGTTGCACGAAACAAGGACCTGTTTGAACAGATAGGAAAGAATATCTATTTTGATCGTGTCGATCATGATAAAGTTCATAGTTTTCGTATTCAGAAGCAGAAGCCCTTCAACCTCTTTAAGGAAGAGGTTGCCAAAGAGTTTGGTATACCAGTTCAATTTCAACGTTTCTGGCTGTGGGCAAAGCGTCAAAACCATACATACCGGCCAAATCGACCACTGACACCTCTTGAGGAAGCACAATCTGTTGGACAGTTGAGGGAAGTTTCCAATAAGTCAAATAATGCAGAGCTAAAGCTGTTTCTTGAAGCAGAACTTGGGCCGGATTTGTTGCCTCTTTCTCCTCCCGAGAAGACTAAAGAAGAGATTCTTCTATTTTTCAAATTTTATGACCCTTCGAAAGAAGAGCTCCGGTATGTTGGGAGGCTGTTTGTGAAGGGTAGTGGTAAGCCCGTGGAATTATTGACAAAACTGCATGAAATGGCTGGTTTGAGTCCTGATGAAAAGATAGAACTTTTTGAGGAAATAAAGTTCGAACCTAATATAATGTGCGAACACATTGATGAGAGGGCAACTTTCCGTGTTAGTCAGCTTGAAGATGGGGACATCATTTGCTTTCAAAAATCCCCTCAGAGTGGAAGCAGCCAACAATTCCGTTATCCAGATGTTCCTTCATTCCTGGATTATGTTCGTAACCGTCAGGTTGTTCGCTTTCGTTCTTTGGACAAGCCGAAGGAAGATGAGTTCTGTCTTGAGTTGTCAAAGTTTCACACCTATGATAATGTTGTGGAAAGAGTTGCTCAACATCTTGGCTTGGATGATCGATCTAAAGTTAGGCTCACTTCTCATAATTGTTACTCACAGCAACCTAAACCCCAGCCAATCAAGTATCGAGGAGTAGAACATTTGTCTGACATGCTGGTGCACTACAATCAGACGACGGACATACTCTATTATGAAGTATTGGATATCCCTCTCCCGGAGTTGCAAGGCCTTAAAACTTTAAAAGTTGCTTTACATCATGCTACCAAGGATGAAGTTATGGTTCACACTATTAGATTACCCAAGCAGAGCACTGTAGGGGACGTGATTGATGACCTTAAGACAAAGGTGGAGTTGTCTCATCCTAATGCCGAACTCAGACTGTTGGAAGTTTTCTATCACAAAATCTACAAGATTTTCCCGCCAAATGAAAAGATTGAGAATATAAATGATCAATACTGGACATTACGTGCAGAAGAGATCCCTGAAGAAGAGAAAAACTTTGGTCCTCATGATCGTCTAGATCGATCCATGTTTATCATTTTATGA

Protein Analysis

990

Amino Acids

115.68

Weight (kDa)

5.86

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000333)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11910 AT3G11910 AT3G11910 AT3G11910 AT5G06600 AT5G06600 AT5G06600
fragaria_vesca FvH4_3g26930 FvH4_3g39132 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220 FvH4_6g21220
malus_domestica MD02G1261100.v1.1 MD03G1161100.v1.1 MD07G1059900.v1.1 MD11G1177100.v1.1 MD12G1047900.v1.1 MD12G1048000.v1.1 MD12G1048400.v1.1 MD12G1048500.v1.1 MD12G1048700.v1.1 MD12G1048800.v1.1 MD12G1056200.v1.1 MD14G1046300.v1.1 MD14G1046500.v1.1 MD15G1166900.v1.1
prunus_persica Prupe.2G066200_v2.0.a1 Prupe.2G066200_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.6G149500_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1 Prupe.7G087600_v2.0.a1
pyrus_communis pycom02g22320 pycom03g11340 pycom07g04580 pycom11g14290 pycom11g15110 pycom12g04110 pycom12g04140 pycom12g04160 pycom12g04210 pycom12g04220 pycom12g04230 pycom12g04290 pycom12g04320 pycom12g04330 pycom12g04350 pycom12g04360 pycom14g03880 pycom14g03900 pycom16g18750
rosa_chinensis RchiOBHm_Chr1g0324111 RchiOBHm_Chr1g0324241 RchiOBHm_Chr3g0477691 RchiOBHm_Chr5g0049371 RchiOBHm_Chr5g0070531
rosa_laevigata RLG00000008612 RLG00000023698 RLG00000034613 RLG00000036139
rosa_multiflora Rmu_co8271779.1_g000001 Rmu_sc0006187.1_g000014
rosa_roxburghii Rroxscaffold_1G00010670 Rroxscaffold_1G00030450 Rroxscaffold_1G00031950 Rroxscaffold_1G00031970 Rroxscaffold_1G00032320 Rroxscaffold_1G00055490 Rroxscaffold_2G00083610 Rroxscaffold_2G00084480 Rroxscaffold_2G00115610 Rroxscaffold_3G00261320 Rroxscaffold_4G00312220 Rroxscaffold_4G00325820 Rroxscaffold_5G00339170 Rroxscaffold_5G00364030 Rroxscaffold_6G00403750
rosa_rugosa Rorug03G0162700 Rorug03G0162800 Rorug03G0162900 Rorug05G0247700 Rorug05G0406600 Rorug05G0406800
rosa_samantha Rh1AG060300 Rh3AG213000 Rh3BG246600 Rh3CG240400 Rh3DG239700 Rh5AG324400 Rh5AG462100 Rh5BG335500 Rh5BG480200 Rh5BG480300 Rh5CG360200 Rh5CG504500 Rh5CG504600 Rh5DG347800 Rh5DG492200 Rh5DG492300
rosa_wichuraiana Rw3G019270 Rw3G026910 Rw5G030650 Rw5G032610 Rw5G043040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1658
AatII GACGTC 1 cut(s) 798
AccB1I GGYRCC 1 cut(s) 888
AccI GTMKAC 1 cut(s) 1807
AciI CCGC 4 cut(s) 139, 205, 1153, 2843
AclI AACGTT 2 cut(s) 1132, 1825
AclWI GGATC 4 cut(s) 98, 246, 2896, 2943
AcoI YGGCCR 1 cut(s) 1865
AcsI RAATTY 4 cut(s) 277, 1361, 1475, 2042
AcuI CTGAAG 6 cut(s) 578, 695, 1106, 1610, 1656, 2928
AcvI CACGTG 1 cut(s) 386
AcyI GRCGYC 1 cut(s) 795
AfaI GTAC 5 cut(s) 605, 635, 716, 865, 1257
AfiI CCNNNNNNNGG 4 cut(s) 446, 1780, 2294, 2638
AflII CTTAAG 1 cut(s) 2759
AgeI ACCGGT 1 cut(s) 539
AhlI ACTAGT 1 cut(s) 725
AjiI CACGTC 1 cut(s) 2746
AjnI CCWGG 2 cut(s) 1450, 2337
AjuI GAANNNNNNNTTGG 2 cut(s) 1959, 1991
AleI CACNNNNGTG 1 cut(s) 1296
AloI GAACNNNNNNTCC 4 cut(s) 2174, 2206, 2387, 2419
Alw21I GWGCWC 4 cut(s) 1293, 2070, 2586, 2735
Alw26I GTCTC 1 cut(s) 2784
Alw44I GTGCAC 2 cut(s) 1289, 2582
AlwI GGATC 4 cut(s) 98, 246, 2896, 2943
AlwNI CAGNNNCTG 1 cut(s) 272
Ama87I CYCGRG 1 cut(s) 2006
AoxI GGCC 4 cut(s) 1334, 1865, 1979, 2650
ApaLI GTGCAC 2 cut(s) 1289, 2582
ApeKI GCWGC 2 cut(s) 787, 2301
ApoI RAATTY 4 cut(s) 277, 1361, 1475, 2042
AsiGI ACCGGT 1 cut(s) 539
Asp700I GAANNNNTTC 2 cut(s) 1766, 2025
AspLEI GCGC 2 cut(s) 1026, 1642
AspS9I GGNCC 4 cut(s) 38, 1678, 1979, 2927
AsuC2I CCSGG 1 cut(s) 2639
AsuHPI GGTGA 2 cut(s) 437, 1046
AsuII TTCGAA 3 cut(s) 496, 2057, 2193
AvaI CYCGRG 1 cut(s) 2006
AvaII GGWCC 3 cut(s) 38, 1678, 2927
BaeGI GKGCMC 4 cut(s) 891, 1293, 1317, 2586
BaeI ACNNNNGTAYC 4 cut(s) 714, 747, 1149, 1182
BanI GGYRCC 1 cut(s) 888
BanII GRGCYC 2 cut(s) 1405, 2070
BarI GAAGNNNNNNTAC 2 cut(s) 1419, 1451
BbrPI CACGTG 1 cut(s) 386
BbsI GAAGAC 2 cut(s) 840, 2018
Bbv12I GWGCWC 4 cut(s) 1293, 2070, 2586, 2735
BbvCI CCTCAGC 1 cut(s) 42
BbvI GCAGC 2 cut(s) 799, 2313
BccI CCATC 3 cut(s) 673, 756, 2252
BciT130I CCWGG 2 cut(s) 1452, 2339
BciVI GTATCC 2 cut(s) 201, 1150
BclI TGATCA 2 cut(s) 1348, 2872
BcnI CCSGG 1 cut(s) 2639
BcoDI GTCTC 1 cut(s) 2784
BcuI ACTAGT 1 cut(s) 725
BfaI CTAG 4 cut(s) 117, 444, 726, 2942
BfmI CTRYAG 2 cut(s) 852, 2736
BfoI RGCGCY 1 cut(s) 1027
BfrI CTTAAG 1 cut(s) 2759
BfuI GTATCC 2 cut(s) 201, 1150
BisI GCNGC 2 cut(s) 788, 2302
BlsI GCNGC 2 cut(s) 789, 2303
Bme1390I CCNGG 3 cut(s) 1452, 2339, 2639
Bme18I GGWCC 3 cut(s) 38, 1678, 2927
BmeT110I CYCGRG 1 cut(s) 2006
BmgBI CACGTC 1 cut(s) 2746
BmgT120I GGNCC 4 cut(s) 38, 1678, 1979, 2927
BmiI GGNNCC 1 cut(s) 890
BmrFI CCNGG 3 cut(s) 1452, 2339, 2639
BmrI ACTGGG 2 cut(s) 301, 406
BmsI GCATC 6 cut(s) 76, 684, 757, 921, 1063, 1231
BmuI ACTGGG 2 cut(s) 301, 406
BpiI GAAGAC 2 cut(s) 840, 2018
BpmI CTGGAG 1 cut(s) 1427
Bpu10I CCTNAGC 1 cut(s) 42
Bpu14I TTCGAA 3 cut(s) 496, 2057, 2193
BpuEI CTTGAG 3 cut(s) 1049, 1910, 2432
BpuMI CCSGG 1 cut(s) 2639
Bsa29I ATCGAT 3 cut(s) 8, 2482, 2947
BsaAI YACGTR 3 cut(s) 386, 1517, 2891
BsaHI GRCGYC 1 cut(s) 795
BsaJI CCNNGG 7 cut(s) 48, 562, 738, 1161, 1451, 2112, 2688
BsaWI WCCGGW 2 cut(s) 539, 2070
BsaXI ACNNNNNCTCC 2 cut(s) 1400, 1430
Bsc4I CCNNNNNNNGG 4 cut(s) 446, 1780, 2294, 2638
Bse118I RCCGGY 2 cut(s) 539, 1863
Bse1I ACTGG 5 cut(s) 307, 401, 518, 1811, 2885
Bse3DI GCAATG 2 cut(s) 686, 1563
BseBI CCWGG 2 cut(s) 1452, 2339
BseCI ATCGAT 3 cut(s) 8, 2482, 2947
BseDI CCNNGG 7 cut(s) 48, 562, 738, 1161, 1451, 2112, 2688
BseLI CCNNNNNNNGG 4 cut(s) 446, 1780, 2294, 2638
BseMI GCAATG 2 cut(s) 686, 1563
BseMII CTCAG 3 cut(s) 56, 2303, 2812
BseNI ACTGG 5 cut(s) 307, 401, 518, 1811, 2885
BseRI GAGGAG 2 cut(s) 1992, 2568
BseSI GKGCMC 4 cut(s) 891, 1293, 1317, 2586
BseXI GCAGC 2 cut(s) 799, 2313
BseYI CCCAGC 1 cut(s) 2535
BsgI GTGCAG 2 cut(s) 99, 2913
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 4 cut(s) 1336, 1867, 1981, 2652
BshNI GGYRCC 1 cut(s) 888
BshTI ACCGGT 1 cut(s) 539
BshVI ATCGAT 3 cut(s) 8, 2482, 2947
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 4 cut(s) 1293, 2070, 2586, 2735
BsiHKCI CYCGRG 1 cut(s) 2006
BsiSI CCGG 6 cut(s) 92, 540, 1864, 1982, 2071, 2639
BsiWI CGTACG 1 cut(s) 1255
BslFI GGGAC 2 cut(s) 2276, 2756
BslI CCNNNNNNNGG 4 cut(s) 446, 1780, 2294, 2638
BsmAI GTCTC 1 cut(s) 2784
BsmFI GGGAC 2 cut(s) 2276, 2756
BsmI GAATGC 1 cut(s) 914
BsnI GGCC 4 cut(s) 1336, 1867, 1981, 2652
BsoBI CYCGRG 1 cut(s) 2006
Bsp119I TTCGAA 3 cut(s) 496, 2057, 2193
Bsp1286I GDGCHC 7 cut(s) 891, 1293, 1317, 1405, 2070, 2586, 2735
Bsp19I CCATGG 2 cut(s) 48, 1161
BspACI CCGC 4 cut(s) 139, 205, 1153, 2843
BspANI GGCC 4 cut(s) 1336, 1867, 1981, 2652
BspCNI CTCAG 3 cut(s) 55, 2302, 2811
BspDI ATCGAT 3 cut(s) 8, 2482, 2947
BspHI TCATGA 2 cut(s) 1726, 2932
BspLI GGNNCC 1 cut(s) 890
BspPI GGATC 4 cut(s) 98, 246, 2896, 2943
BspQI GCTCTTC 1 cut(s) 2058
BspT104I TTCGAA 3 cut(s) 496, 2057, 2193
BspT107I GGYRCC 1 cut(s) 888
BspTI CTTAAG 1 cut(s) 2759
BsrDI GCAATG 2 cut(s) 686, 1563
BsrFI RCCGGY 2 cut(s) 539, 1863
BsrI ACTGG 5 cut(s) 307, 401, 518, 1811, 2885
BssAI RCCGGY 2 cut(s) 539, 1863
BssECI CCNNGG 7 cut(s) 48, 562, 738, 1161, 1451, 2112, 2688
BssNAI GTATAC 1 cut(s) 1808
BssNI GRCGYC 1 cut(s) 795
BssT1I CCWWGG 5 cut(s) 48, 562, 738, 1161, 2688
Bst1107I GTATAC 1 cut(s) 1808
Bst2UI CCWGG 2 cut(s) 1452, 2339
Bst6I CTCTTC 8 cut(s) 1278, 1391, 1425, 1779, 2016, 2058, 2892, 2907
BstACI GRCGYC 1 cut(s) 795
BstAFI CTTAAG 1 cut(s) 2759
BstAPI GCANNNNNTGC 1 cut(s) 86
BstBAI YACGTR 3 cut(s) 386, 1517, 2891
BstBI TTCGAA 3 cut(s) 496, 2057, 2193
BstDEI CTNAG 6 cut(s) 42, 528, 1077, 1577, 2289, 2798
BstDSI CCRYGG 3 cut(s) 48, 1161, 2112
BstENI CCTNNNNNAGG 2 cut(s) 444, 1778
BstH2I RGCGCY 1 cut(s) 1027
BstHHI GCGC 2 cut(s) 1026, 1642
BstMAI GTCTC 1 cut(s) 2784
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 3 cut(s) 86, 488, 1312
BstNI CCWGG 2 cut(s) 1452, 2339
BstNSI RCATGY 2 cut(s) 1504, 2578
BstSCI CCNGG 3 cut(s) 1450, 2337, 2637
BstSFI CTRYAG 2 cut(s) 852, 2736
BstSLI GKGCMC 4 cut(s) 891, 1293, 1317, 2586
BstV1I GCAGC 2 cut(s) 799, 2313
BstV2I GAAGAC 2 cut(s) 840, 2018
BstX2I RGATCY 1 cut(s) 2901
BstXI CCANNNNNNTGG 1 cut(s) 291
BstYI RGATCY 1 cut(s) 2901
BstZ17I GTATAC 1 cut(s) 1808
Bsu15I ATCGAT 3 cut(s) 8, 2482, 2947
BsuI GTATCC 2 cut(s) 201, 1150
BsuRI GGCC 4 cut(s) 1336, 1867, 1981, 2652
BsuTUI ATCGAT 3 cut(s) 8, 2482, 2947
BtgI CCRYGG 3 cut(s) 48, 1161, 2112
BtrI CACGTC 1 cut(s) 2746
BtsI GCAGTG 2 cut(s) 87, 102
BtsIMutI CAGTG 7 cut(s) 82, 87, 102, 1300, 1358, 1877, 2733
CaiI CAGNNNCTG 1 cut(s) 272
CciI TCATGA 2 cut(s) 1726, 2932
CfoI GCGC 2 cut(s) 1026, 1642
Cfr10I RCCGGY 2 cut(s) 539, 1863
Cfr13I GGNCC 4 cut(s) 38, 1678, 1979, 2927
ClaI ATCGAT 3 cut(s) 8, 2482, 2947
CseI GACGC 1 cut(s) 1835
Csp6I GTAC 5 cut(s) 604, 634, 715, 864, 1256
CspAI ACCGGT 1 cut(s) 539
CviQI GTAC 5 cut(s) 604, 634, 715, 864, 1256
DdeI CTNAG 6 cut(s) 42, 528, 1077, 1577, 2289, 2798
DraI TTTAAA 3 cut(s) 1360, 1474, 2664
EaeI YGGCCR 1 cut(s) 1865
Eam1104I CTCTTC 8 cut(s) 1278, 1391, 1425, 1779, 2016, 2058, 2892, 2907
EarI CTCTTC 8 cut(s) 1278, 1391, 1425, 1779, 2016, 2058, 2892, 2907
EciI GGCGGA 1 cut(s) 220
Ecl136II GAGCTC 1 cut(s) 2068
Eco130I CCWWGG 5 cut(s) 48, 562, 738, 1161, 2688
Eco147I AGGCCT 1 cut(s) 2652
Eco24I GRGCYC 2 cut(s) 1405, 2070
Eco32I GATATC 1 cut(s) 2629
Eco47I GGWCC 3 cut(s) 38, 1678, 2927
Eco53kI GAGCTC 1 cut(s) 2068
Eco57I CTGAAG 6 cut(s) 578, 695, 1106, 1610, 1656, 2928
Eco72I CACGTG 1 cut(s) 386
Eco88I CYCGRG 1 cut(s) 2006
EcoICRI GAGCTC 1 cut(s) 2068
EcoNI CCTNNNNNAGG 2 cut(s) 444, 1778
EcoO109I RGGNCCY 1 cut(s) 1678
EcoRII CCWGG 2 cut(s) 1450, 2337
EcoRV GATATC 1 cut(s) 2629
EcoT14I CCWWGG 5 cut(s) 48, 562, 738, 1161, 2688
EcoT22I ATGCAT 3 cut(s) 473, 772, 914
EcoT38I GRGCYC 2 cut(s) 1405, 2070
ErhI CCWWGG 5 cut(s) 48, 562, 738, 1161, 2688
FalI AAGNNNNNCTT 6 cut(s) 1629, 1661, 1959, 1991, 2013, 2045
FaqI GGGAC 2 cut(s) 2276, 2756
FauI CCCGC 2 cut(s) 1146, 2850
FauNDI CATATG 3 cut(s) 286, 639, 772
FbaI TGATCA 2 cut(s) 1348, 2872
FblI GTMKAC 1 cut(s) 1807
Fnu4HI GCNGC 2 cut(s) 788, 2302
FriOI GRGCYC 2 cut(s) 1405, 2070
Fsp4HI GCNGC 2 cut(s) 788, 2302
FspBI CTAG 4 cut(s) 117, 444, 726, 2942
GlaI GCGC 2 cut(s) 1025, 1641
GluI GCNGC 2 cut(s) 788, 2302
GsaI CCCAGC 1 cut(s) 2539
GsuI CTGGAG 1 cut(s) 1427
HaeII RGCGCY 1 cut(s) 1027
HaeIII GGCC 4 cut(s) 1336, 1867, 1981, 2652
HapII CCGG 6 cut(s) 92, 540, 1864, 1982, 2071, 2639
HgaI GACGC 1 cut(s) 1835
HhaI GCGC 2 cut(s) 1026, 1642
Hin1I GRCGYC 1 cut(s) 795
Hin6I GCGC 2 cut(s) 1024, 1640
HinP1I GCGC 2 cut(s) 1024, 1640
HincII GTYRAC 1 cut(s) 1525
HindII GTYRAC 1 cut(s) 1525
HindIII AAGCTT 3 cut(s) 694, 707, 827
HinfI GANTC 6 cut(s) 269, 524, 776, 944, 2026, 2152
HpaII CCGG 6 cut(s) 92, 540, 1864, 1982, 2071, 2639
HphI GGTGA 2 cut(s) 437, 1046
Hpy166II GTNNAC 8 cut(s) 634, 922, 1067, 1291, 1525, 1808, 2584, 2707
Hpy8I GTNNAC 8 cut(s) 634, 922, 1067, 1291, 1525, 1808, 2584, 2707
Hpy99I CGWCG 1 cut(s) 2602
HpyAV CCTTC 9 cut(s) 421, 492, 526, 878, 1777, 2064, 2089, 2340, 2386
HpyCH4IV ACGT 9 cut(s) 385, 599, 795, 1132, 1516, 1548, 1825, 2745, 2890
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 488, 1312
HpyF3I CTNAG 6 cut(s) 42, 528, 1077, 1577, 2289, 2798
HpySE526I ACGT 9 cut(s) 385, 599, 795, 1132, 1516, 1548, 1825, 2745, 2890
Hsp92I GRCGYC 1 cut(s) 795
HspAI GCGC 2 cut(s) 1024, 1640
Ksp22I TGATCA 2 cut(s) 1348, 2872
LguI GCTCTTC 1 cut(s) 2058
LmnI GCTCC 8 cut(s) 94, 566, 742, 1021, 1251, 1471, 1612, 2073
Lsp1109I GCAGC 2 cut(s) 799, 2313
LweI GCATC 6 cut(s) 76, 684, 757, 921, 1063, 1231
MaeI CTAG 4 cut(s) 117, 444, 726, 2942
MaeII ACGT 9 cut(s) 385, 599, 795, 1132, 1516, 1548, 1825, 2745, 2890
MaeIII GTNAC 7 cut(s) 392, 516, 1378, 1434, 1544, 2351, 2513
MfeI CAATTG 1 cut(s) 132
MflI RGATCY 1 cut(s) 2901
MhlI GDGCHC 7 cut(s) 891, 1293, 1317, 1405, 2070, 2586, 2735
MlyI GAGTC 3 cut(s) 518, 953, 2161
MmeI TCCRAC 4 cut(s) 48, 169, 1888, 2787
Mph1103I ATGCAT 3 cut(s) 473, 772, 914
MroXI GAANNNNTTC 2 cut(s) 1766, 2025
MseI TTAA 9 cut(s) 143, 153, 378, 1359, 1473, 1779, 2655, 2663, 2760
MspCI CTTAAG 1 cut(s) 2759
MspI CCGG 6 cut(s) 92, 540, 1864, 1982, 2071, 2639
MspR9I CCNGG 3 cut(s) 1452, 2339, 2639
MunI CAATTG 1 cut(s) 132
Mva1269I GAATGC 1 cut(s) 914
MvaI CCWGG 2 cut(s) 1452, 2339
MwoI GCNNNNNNNGC 3 cut(s) 86, 488, 1312
NciI CCSGG 1 cut(s) 2639
NcoI CCATGG 2 cut(s) 48, 1161
NdeI CATATG 3 cut(s) 286, 639, 772
NlaIV GGNNCC 1 cut(s) 890
NmuCI GTSAC 2 cut(s) 392, 516
NsiI ATGCAT 3 cut(s) 473, 772, 914
NspI RCATGY 2 cut(s) 1504, 2578
NspV TTCGAA 3 cut(s) 496, 2057, 2193
OliI CACNNNNGTG 1 cut(s) 1296
PagI TCATGA 2 cut(s) 1726, 2932
PceI AGGCCT 1 cut(s) 2652
PciSI GCTCTTC 1 cut(s) 2058
PcsI WCGNNNNNNNCGW 1 cut(s) 2944
PctI GAATGC 1 cut(s) 914
PdmI GAANNNNTTC 2 cut(s) 1766, 2025
PfeI GAWTC 3 cut(s) 269, 776, 2026
Pfl23II CGTACG 1 cut(s) 1255
PflFI GACNNNGTC 1 cut(s) 751
PfoI TCCNGGA 2 cut(s) 2337, 2637
PinAI ACCGGT 1 cut(s) 539
PkrI GCNGC 2 cut(s) 789, 2303
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 3 cut(s) 518, 952, 2160
PmaCI CACGTG 1 cut(s) 386
PmlI CACGTG 1 cut(s) 386
PpsI GAGTC 3 cut(s) 518, 952, 2160
Ppu21I YACGTR 3 cut(s) 386, 1517, 2891
PpuMI RGGWCCY 1 cut(s) 1678
PsiI TTATAA 1 cut(s) 1658
Psp124BI GAGCTC 1 cut(s) 2070
Psp1406I AACGTT 2 cut(s) 1132, 1825
Psp5II RGGWCCY 1 cut(s) 1678
Psp6I CCWGG 2 cut(s) 1450, 2337
PspCI CACGTG 1 cut(s) 386
PspFI CCCAGC 1 cut(s) 2535
PspGI CCWGG 2 cut(s) 1450, 2337
PspLI CGTACG 1 cut(s) 1255
PspN4I GGNNCC 1 cut(s) 890
PspPI GGNCC 4 cut(s) 38, 1678, 1979, 2927
PspPPI RGGWCCY 1 cut(s) 1678
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 1 cut(s) 2901
PsyI GACNNNGTC 1 cut(s) 751
PvuI CGATCG 1 cut(s) 12
RsaI GTAC 5 cut(s) 605, 635, 716, 865, 1257
RsaNI GTAC 5 cut(s) 604, 634, 715, 864, 1256
SacI GAGCTC 1 cut(s) 2070
SapI GCTCTTC 1 cut(s) 2058
SaqAI TTAA 9 cut(s) 143, 153, 378, 1359, 1473, 1779, 2655, 2663, 2760
SatI GCNGC 2 cut(s) 788, 2302
Sau96I GGNCC 4 cut(s) 38, 1678, 1979, 2927
SchI GAGTC 3 cut(s) 518, 953, 2161
ScrFI CCNGG 3 cut(s) 1452, 2339, 2639
SduI GDGCHC 7 cut(s) 891, 1293, 1317, 1405, 2070, 2586, 2735
SfaNI GCATC 6 cut(s) 76, 684, 757, 921, 1063, 1231
SfcI CTRYAG 2 cut(s) 852, 2736
SfuI TTCGAA 3 cut(s) 496, 2057, 2193
SinI GGWCC 3 cut(s) 38, 1678, 2927
SmiI ATTTAAAT 1 cut(s) 1474
SmlI CTYRAG 4 cut(s) 1028, 1889, 2411, 2759
SmoI CTYRAG 4 cut(s) 1028, 1889, 2411, 2759
SpeI ACTAGT 1 cut(s) 725
SseBI AGGCCT 1 cut(s) 2652
SsiI CCGC 4 cut(s) 139, 205, 1153, 2843
SspI AATATT 1 cut(s) 1487
SspMI CTAG 4 cut(s) 117, 444, 726, 2942
SstI GAGCTC 1 cut(s) 2070
StuI AGGCCT 1 cut(s) 2652
StyD4I CCNGG 3 cut(s) 1450, 2337, 2637
StyI CCWWGG 5 cut(s) 48, 562, 738, 1161, 2688
SwaI ATTTAAAT 1 cut(s) 1474
TaiI ACGT 9 cut(s) 388, 602, 798, 1135, 1519, 1551, 1828, 2748, 2893
TatI WGTACW 1 cut(s) 714
TfiI GAWTC 3 cut(s) 269, 776, 2026
Tru1I TTAA 9 cut(s) 143, 153, 378, 1359, 1473, 1779, 2655, 2663, 2760
Tru9I TTAA 9 cut(s) 143, 153, 378, 1359, 1473, 1779, 2655, 2663, 2760
TscAI CASTG 7 cut(s) 82, 87, 102, 1300, 1358, 1884, 2740
TseFI GTSAC 2 cut(s) 392, 516
TseI GCWGC 2 cut(s) 787, 2301
Tsp45I GTSAC 2 cut(s) 392, 516
TspGWI ACGGA 4 cut(s) 665, 2228, 2303, 2615
TspRI CASTG 7 cut(s) 82, 87, 102, 1300, 1358, 1884, 2740
Tth111I GACNNNGTC 1 cut(s) 751
Vha464I CTTAAG 1 cut(s) 2759
VneI GTGCAC 2 cut(s) 1289, 2582
VpaK11BI GGWCC 3 cut(s) 38, 1678, 2927
XagI CCTNNNNNAGG 2 cut(s) 444, 1778
XapI RAATTY 4 cut(s) 277, 1361, 1475, 2042
XbaI TCTAGA 1 cut(s) 2941
XceI RCATGY 2 cut(s) 1504, 2578
XcmI CCANNNNNNNNNTGG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 1807
XmnI GAANNNNTTC 2 cut(s) 1766, 2025
XspI CTAG 4 cut(s) 117, 444, 726, 2942
ZraI GACGTC 1 cut(s) 796
Zsp2I ATGCAT 3 cut(s) 473, 772, 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.