Rroxscaffold_1G00025730

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000640
Physical Location & Seq
Reverse (-)
32328891 .. 32365498
36608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00025730.1

Sequence Viewer

Length: 2016 bp
ATGGAGGGTGTTACAAGCGAGCAAGGGGAAGCTCGTGTGGATGTCGAGGGCGAGTTGCACGGCAAGAATGTTAGGGAGCAGGGCCGAGACGGGGAACGAGACAGAGTAAGGGAGCGAGCGCGCGTGCCGAGGGCGAGACTTAGCATTCATTCGTCCGAAGTAGTGTATCGCGTACCGATAACATTCATTCATTCGTTTGGAGGCATGCATTCATTTGATGCGACCGATATGGCATCGAAGAACCTCGTGTCCCGCATCGAGGATTGGGAGAATCCCTTCCCACGCTTGAATATAAAGATTATAGCACAACCACCTTTAAAAGGTAAGAACTCCTTGATCCACGATTTATTCTACACAGCTATTAGTTTCTCACTCAGTATCGGAGAGCCAAGCTCTCTCCACCCCATTGGGTACCGGAGGCCCAAATCTTCTACCCCACGGTATCGAAGCGAAGCTCTCTCCACCCCCCATGGGTACCGGAGGCTCAAATCTTCTACCCCATCGGCATCGAAACGAAGCTCTCTCCACCCCATTGGGTACCGGAGGCTCAAATCTTCTACCCCATCGGCATCGAAGCGAAGCTCTCTCCACCCTATCGAGTACCGGAGGCTCAAATCTTCTACCCCATCGGGTATCGAAGCCAAGCTCTCTCCACCCCATCGGGTACCGGAGGCTCAAATCTTCTACCCCATCGGGTATCGAAGCCAAGCTCTCTCCACCCGATTGGGAAATAAGCGAAATTGCAGAAATCAAGAAAAATGGTGGAAAATTGAGCAAAATGGAGTTTTCGACAAAATGACAAAAAGTCAATATTGGTCAACCATAGTCAACGTGAGTGAGGAAGCTGAGTTTGATTATTCCATGCGATTTGTGGGAGTCCGGCTTCTTTTCTTTCGGTATGGGACGTTCGTGATCCCGGTATCGCCCGTGGTGTATCGGGATGGCCACCGGGAGCTTTACTCACTTCTATATGGCGATACGAAGGTATATGTATACCAACAAGTCCCCCAAGTCCCCGGTCAAGAATTCTCTTGGGTGGGGAGTTTGTCTTTGGTAGAAGTATCGGAAGTGCAAGGAGAGTTTATGCCACGTGGCTTGCGTACAGCCATTACCCCTAGTCCCCCAAGTCCCTACTTAAGAGGAGTCATGGCCGGGGTGAAGAGATCGTACTCGCGCTTGGCGTTGTGTAGCTATCGCGAATTTGTGGTAGGGTTCATGCGTCTTTTAGAACATACGATATACCCCGGTGACATGCTCAAATCTTCTACCCCATCGGGCATCGAAGCCAAGCTCTCTCCACCCCATCGGGTACCGGAGGCCCAAATCTTCTACCCCATCGGTATCGAAGCCAAGCTCCCTCCACCCCATCGGGTACCGGAGGCTCAAATCTCCTACCCCATCGGCATCGAAGCCCGCTCTTTCCACCCCATTGGGTACCGGAGGCTCAAATCTTCTACCCCATCGGGAATCGAAGCAAAGTTCTCTCCACCCCATCGAGTACGGGAGGCTCAAATCTTCTACCCCATCGGTATCGAAGCCAAGCTCTCTCCACCCCATCGGGTACCGGAGGCTCAAATCTTCTACCCCACGGGCATCGAAGCCAAGCTCTCTCCACCCCATTGGGTACGGTGGCCCAAATCTTCTACCCCATCGGGTATCGAAGCCAAGCTCTCTCCACCCCATCGGGTACCGGAGTCTCAAATCTTCTCAAATCTTCTACCCCATCGGGTATCGAAGCCAAGCTCTCTCCACCCCATCGGGTACCGGAGTCTCAAATCTTCTACCCCATCGGTTATCGAAGCGAAGGCTCTCCACCCCATCGGGTACCGGAGGCTCAAATCTTCTACCTCATCGGGTATCGGAGCCAAGCTCTCTCCACCCATTGGGTACCGGAGGCTCAAATCTTCTCCATCCCACCCGGTCCCGGGACAACCTCATTGTCCCACGAAAGTGGCTTACCTACAGCGTAGCCCGCTCAAGATTTCTCTTCGAGGGAACTTGGTGGACTACCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

671

Amino Acids

75.54

Weight (kDa)

10.1

Isoelectric Point (pI)

59.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000640)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0331021 RchiOBHm_Chr1g0335951 RchiOBHm_Chr1g0338001 RchiOBHm_Chr6g0276241 RchiOBHm_Chr6g0297731 RchiOBHm_Chr7g0188211 RchiOBHm_Chr7g0217921 RchiOBHm_Chr7g0238211
rosa_laevigata RLG00000007457 RLG00000015447 RLG00000019185 RLG00000032916 RLG00000034538
rosa_multiflora Rmu_sc0000923.1_g000008 Rmu_sc0002931.1_g000001 Rmu_sc0006850.1_g000014
rosa_roxburghii Rroxscaffold_1G00021360 Rroxscaffold_1G00022610 Rroxscaffold_1G00022620 Rroxscaffold_1G00025730 Rroxscaffold_1G00029440 Rroxscaffold_1G00029610 Rroxscaffold_1G00032940 Rroxscaffold_1G00034000 Rroxscaffold_2G00087130 Rroxscaffold_2G00093110 Rroxscaffold_2G00097280 Rroxscaffold_2G00121440 Rroxscaffold_3G00225890 Rroxscaffold_3G00238130 Rroxscaffold_3G00241910 Rroxscaffold_3G00267280 Rroxscaffold_4G00295970 Rroxscaffold_4G00299040 Rroxscaffold_4G00303830 Rroxscaffold_4G00305880 Rroxscaffold_5G00335820 Rroxscaffold_5G00343740 Rroxscaffold_5G00346800 Rroxscaffold_5G00348110 Rroxscaffold_5G00371220 Rroxscaffold_5G00383470 Rroxscaffold_5G00387630 Rroxscaffold_6G00388100 Rroxscaffold_6G00395960 Rroxscaffold_6G00397500 Rroxscaffold_6G00405550 Rroxscaffold_7G00195020 Rroxscaffold_7G00217460
rosa_rugosa Rorug02G0515900 Rorug06G0038100.1
rosa_samantha Rh1CG171700 Rh2AG250300 Rh2AG481200 Rh2CG103900 Rh2CG467500 Rh2DG121800 Rh2DG258400 Rh3AG000900 Rh3CG000600 Rh3DG000800 Rh4DG164800 Rh5AG157100 Rh5AG476500 Rh5AG519300 Rh5DG192000 Rh5DG243900 Rh6CG399800 Rh6DG207500 Rh6DG458300 Rh6DG458400 Rh7AG314100 Rh7AG466900 Rh7DG095400
rosa_wichuraiana Rw5G004310 Rw5G049380 Rw6G000590 Rw6G025650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1883
AccBSI CCGCTC 2 cut(s) 1416, 1975
AccI GTMKAC 1 cut(s) 993
AccII CGCG 5 cut(s) 121, 123, 171, 1174, 1197
AciI CCGC 3 cut(s) 253, 1414, 1973
AclWI GGATC 2 cut(s) 331, 907
AcoI YGGCCR 2 cut(s) 943, 1149
AcsI RAATTY 2 cut(s) 1025, 1199
AcvI CACGTG 1 cut(s) 1091
AfiI CCNNNNNNNGG 7 cut(s) 91, 259, 320, 471, 1883, 1924, 1925
AflII CTTAAG 1 cut(s) 1135
AgsI TTSAA 1 cut(s) 289
AhdI GACNNNNNGTC 1 cut(s) 804
AleI CACNNNNGTG 1 cut(s) 1949
AloI GAACNNNNNNTCC 2 cut(s) 233, 265
Alw26I GTCTC 5 cut(s) 81, 93, 130, 1701, 1775
AlwI GGATC 2 cut(s) 331, 907
Ama87I CYCGRG 1 cut(s) 1924
AoxI GGCC 6 cut(s) 82, 419, 943, 1149, 1317, 1631
ApoI RAATTY 2 cut(s) 1025, 1199
Asp700I GAANNNNTTC 1 cut(s) 275
AspLEI GCGC 3 cut(s) 121, 123, 1176
AspS9I GGNCC 5 cut(s) 82, 420, 1318, 1632, 1921
AsuC2I CCSGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
AsuHPI GGTGA 2 cut(s) 1168, 1259
AvaI CYCGRG 1 cut(s) 1924
AvaII GGWCC 1 cut(s) 1921
BaeI ACNNNNGTAYC 6 cut(s) 969, 1002, 1679, 1712, 1753, 1786
BalI TGGCCA 1 cut(s) 945
BarI GAAGNNNNNNTAC 2 cut(s) 1151, 1183
BauI CACGAG 2 cut(s) 33, 245
BbrPI CACGTG 1 cut(s) 1091
BceAI ACGGC 1 cut(s) 76
BcnI CCSGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
BcoDI GTCTC 5 cut(s) 81, 93, 130, 1701, 1775
BfaI CTAG 1 cut(s) 1116
BfmI CTRYAG 1 cut(s) 1961
BfrI CTTAAG 1 cut(s) 1135
Bme1390I CCNGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
Bme18I GGWCC 1 cut(s) 1921
BmeRI GACNNNNNGTC 1 cut(s) 804
BmeT110I CYCGRG 1 cut(s) 1924
BmgT120I GGNCC 5 cut(s) 82, 420, 1318, 1632, 1921
BmrFI CCNGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
BmsI GCATC 8 cut(s) 208, 242, 264, 515, 578, 1287, 1413, 1602
BplI GAGNNNNNCTC 6 cut(s) 377, 409, 944, 976, 1854, 1886
BpuEI CTTGAG 1 cut(s) 1961
BpuMI CCSGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
BsaAI YACGTR 1 cut(s) 1091
BsaJI CCNNGG 9 cut(s) 128, 437, 469, 927, 1015, 1152, 1243, 1587, 1924
Bsc4I CCNNNNNNNGG 7 cut(s) 91, 259, 320, 471, 1883, 1924, 1925
BseDI CCNNGG 9 cut(s) 128, 437, 469, 927, 1015, 1152, 1243, 1587, 1924
BseGI GGATG 3 cut(s) 46, 946, 1910
BseLI CCNNNNNNNGG 7 cut(s) 91, 259, 320, 471, 1883, 1924, 1925
BseMII CTCAG 2 cut(s) 388, 837
BsePI GCGCGC 1 cut(s) 119
BseRI GAGGAG 1 cut(s) 1155
Bsh1236I CGCG 5 cut(s) 121, 123, 171, 1174, 1197
Bsh1285I CGRYCG 1 cut(s) 225
BshFI GGCC 6 cut(s) 84, 421, 945, 1151, 1319, 1633
BsiEI CGRYCG 1 cut(s) 225
BsiHKCI CYCGRG 1 cut(s) 1924
BslFI GGGAC 9 cut(s) 235, 916, 989, 998, 1104, 1113, 1907, 1926, 1941
BslI CCNNNNNNNGG 7 cut(s) 91, 259, 320, 471, 1883, 1924, 1925
BsmAI GTCTC 5 cut(s) 81, 93, 130, 1701, 1775
BsmBI CGTCTC 1 cut(s) 81
BsmFI GGGAC 9 cut(s) 235, 916, 989, 998, 1104, 1113, 1907, 1926, 1941
BsmI GAATGC 2 cut(s) 144, 208
BsnI GGCC 6 cut(s) 84, 421, 945, 1151, 1319, 1633
BsoBI CYCGRG 1 cut(s) 1924
Bsp143I GATC 3 cut(s) 336, 912, 1163
Bsp19I CCATGG 1 cut(s) 469
Bsp68I TCGCGA 1 cut(s) 1197
BspACI CCGC 3 cut(s) 253, 1414, 1973
BspANI GGCC 6 cut(s) 84, 421, 945, 1151, 1319, 1633
BspCNI CTCAG 2 cut(s) 387, 838
BspFNI CGCG 5 cut(s) 121, 123, 171, 1174, 1197
BspPI GGATC 2 cut(s) 331, 907
BspTI CTTAAG 1 cut(s) 1135
BsrBI CCGCTC 2 cut(s) 1416, 1975
BssECI CCNNGG 9 cut(s) 128, 437, 469, 927, 1015, 1152, 1243, 1587, 1924
BssHII GCGCGC 1 cut(s) 119
BssMI GATC 3 cut(s) 336, 912, 1163
BssNAI GTATAC 1 cut(s) 994
BssSI CACGAG 2 cut(s) 33, 245
BssT1I CCWWGG 1 cut(s) 469
Bst1107I GTATAC 1 cut(s) 994
Bst2BI CACGAG 2 cut(s) 33, 245
Bst4CI ACNGT 2 cut(s) 441, 1629
Bst6I CTCTTC 2 cut(s) 1154, 1992
BstAFI CTTAAG 1 cut(s) 1135
BstBAI YACGTR 1 cut(s) 1091
BstC8I GCNNGC 8 cut(s) 20, 117, 121, 125, 206, 1097, 1414, 1973
BstDEI CTNAG 3 cut(s) 140, 374, 846
BstDSI CCRYGG 4 cut(s) 437, 469, 927, 1587
BstENI CCTNNNNNAGG 1 cut(s) 318
BstF5I GGATG 3 cut(s) 46, 946, 1910
BstFNI CGCG 5 cut(s) 121, 123, 171, 1174, 1197
BstHHI GCGC 3 cut(s) 121, 123, 1176
BstKTI GATC 3 cut(s) 339, 915, 1166
BstMAI GTCTC 5 cut(s) 81, 93, 130, 1701, 1775
BstMBI GATC 3 cut(s) 336, 912, 1163
BstMCI CGRYCG 1 cut(s) 225
BstMWI GCNNNNNNNGC 1 cut(s) 1972
BstNSI RCATGY 2 cut(s) 208, 1255
BstSCI CCNGG 8 cut(s) 915, 948, 1015, 1151, 1243, 1917, 1923, 1924
BstSFI CTRYAG 1 cut(s) 1961
BstUI CGCG 5 cut(s) 121, 123, 171, 1174, 1197
BstXI CCANNNNNNTGG 6 cut(s) 407, 533, 724, 1430, 1620, 1951
BstZ17I GTATAC 1 cut(s) 994
BsuRI GGCC 6 cut(s) 84, 421, 945, 1151, 1319, 1633
BtgI CCRYGG 4 cut(s) 437, 469, 927, 1587
BtsCI GGATG 3 cut(s) 46, 946, 1910
BtuMI TCGCGA 1 cut(s) 1197
Cac8I GCNNGC 8 cut(s) 20, 117, 121, 125, 206, 1097, 1414, 1973
CfoI GCGC 3 cut(s) 121, 123, 1176
Cfr13I GGNCC 5 cut(s) 82, 420, 1318, 1632, 1921
Cfr9I CCCGGG 1 cut(s) 1924
CseI GACGC 1 cut(s) 1208
CspCI CAANNNNNGTGG 2 cut(s) 1077, 1112
CviAII CATG 6 cut(s) 205, 470, 862, 1147, 1216, 1252
DdeI CTNAG 3 cut(s) 140, 374, 846
DpnI GATC 3 cut(s) 338, 914, 1165
DpnII GATC 3 cut(s) 336, 912, 1163
DraI TTTAAA 1 cut(s) 318
DriI GACNNNNNGTC 1 cut(s) 804
EaeI YGGCCR 2 cut(s) 943, 1149
Eam1104I CTCTTC 2 cut(s) 1154, 1992
Eam1105I GACNNNNNGTC 1 cut(s) 804
EarI CTCTTC 2 cut(s) 1154, 1992
Eco130I CCWWGG 1 cut(s) 469
Eco47I GGWCC 1 cut(s) 1921
Eco72I CACGTG 1 cut(s) 1091
Eco88I CYCGRG 1 cut(s) 1924
EcoNI CCTNNNNNAGG 1 cut(s) 318
EcoRI GAATTC 1 cut(s) 1025
EcoT14I CCWWGG 1 cut(s) 469
EcoT22I ATGCAT 1 cut(s) 210
ErhI CCWWGG 1 cut(s) 469
Esp3I CGTCTC 1 cut(s) 81
FaeI CATG 6 cut(s) 208, 473, 865, 1150, 1219, 1255
FalI AAGNNNNNCTT 2 cut(s) 317, 349
FaqI GGGAC 9 cut(s) 235, 916, 989, 998, 1104, 1113, 1907, 1926, 1941
FatI CATG 6 cut(s) 204, 469, 861, 1146, 1215, 1251
FauI CCCGC 3 cut(s) 260, 1421, 1980
FblI GTMKAC 1 cut(s) 993
FokI GGATG 3 cut(s) 53, 953, 1897
FspBI CTAG 1 cut(s) 1116
GlaI GCGC 3 cut(s) 120, 122, 1175
HaeIII GGCC 6 cut(s) 84, 421, 945, 1151, 1319, 1633
HgaI GACGC 1 cut(s) 1208
HhaI GCGC 3 cut(s) 121, 123, 1176
Hin1II CATG 6 cut(s) 208, 473, 865, 1150, 1219, 1255
Hin6I GCGC 3 cut(s) 119, 121, 1174
HinP1I GCGC 3 cut(s) 119, 121, 1174
HincII GTYRAC 2 cut(s) 819, 829
HindII GTYRAC 2 cut(s) 819, 829
HinfI GANTC 6 cut(s) 271, 876, 1143, 1467, 1694, 1768
HphI GGTGA 2 cut(s) 1168, 1259
Hpy166II GTNNAC 4 cut(s) 819, 829, 994, 2005
Hpy188I TCNGA 4 cut(s) 157, 383, 1066, 1862
Hpy188III TCNNGA 7 cut(s) 752, 910, 938, 1022, 1196, 1464, 1978
Hpy8I GTNNAC 4 cut(s) 819, 829, 994, 2005
HpyAV CCTTC 3 cut(s) 286, 976, 1798
HpyCH4III ACNGT 2 cut(s) 441, 1629
HpyCH4IV ACGT 3 cut(s) 831, 905, 1090
HpyCH4V TGCA 4 cut(s) 58, 208, 744, 1072
HpyF10VI GCNNNNNNNGC 1 cut(s) 1972
HpyF3I CTNAG 3 cut(s) 140, 374, 846
HpySE526I ACGT 3 cut(s) 831, 905, 1090
Hsp92II CATG 6 cut(s) 208, 473, 865, 1150, 1219, 1255
HspAI GCGC 3 cut(s) 119, 121, 1174
Kzo9I GATC 3 cut(s) 336, 912, 1163
LmnI GCTCC 5 cut(s) 76, 112, 952, 1359, 1862
LweI GCATC 8 cut(s) 208, 242, 264, 515, 578, 1287, 1413, 1602
MaeI CTAG 1 cut(s) 1116
MaeII ACGT 3 cut(s) 831, 905, 1090
MaeIII GTNAC 2 cut(s) 10, 1247
MalI GATC 3 cut(s) 338, 914, 1165
MbiI CCGCTC 2 cut(s) 1416, 1975
MboI GATC 3 cut(s) 336, 912, 1163
MlsI TGGCCA 1 cut(s) 945
MluCI AATT 4 cut(s) 739, 768, 1025, 1199
MluNI TGGCCA 1 cut(s) 945
MlyI GAGTC 4 cut(s) 885, 1152, 1703, 1777
Mox20I TGGCCA 1 cut(s) 945
Mph1103I ATGCAT 1 cut(s) 210
MroXI GAANNNNTTC 1 cut(s) 275
MscI TGGCCA 1 cut(s) 945
MseI TTAA 2 cut(s) 317, 1136
MslI CAYNNNNRTG 1 cut(s) 1949
Msp20I TGGCCA 1 cut(s) 945
MspCI CTTAAG 1 cut(s) 1135
MspR9I CCNGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
Mva1269I GAATGC 2 cut(s) 144, 208
MvnI CGCG 5 cut(s) 121, 123, 171, 1174, 1197
MwoI GCNNNNNNNGC 1 cut(s) 1972
NciI CCSGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
NcoI CCATGG 1 cut(s) 469
NdeII GATC 3 cut(s) 336, 912, 1163
NlaIII CATG 6 cut(s) 208, 473, 865, 1150, 1219, 1255
NmeAIII GCCGAG 2 cut(s) 110, 153
NmuCI GTSAC 1 cut(s) 1247
NruI TCGCGA 1 cut(s) 1197
NsiI ATGCAT 1 cut(s) 210
NspI RCATGY 2 cut(s) 208, 1255
OliI CACNNNNGTG 1 cut(s) 1949
PaeI GCATGC 1 cut(s) 208
PauI GCGCGC 1 cut(s) 119
PcsI WCGNNNNNNNCGW 2 cut(s) 1096, 1178
PctI GAATGC 2 cut(s) 144, 208
PdmI GAANNNNTTC 1 cut(s) 275
PfeI GAWTC 2 cut(s) 271, 1467
PflMI CCANNNNNTGG 1 cut(s) 1883
PleI GAGTC 4 cut(s) 884, 1151, 1702, 1776
PmaCI CACGTG 1 cut(s) 1091
PmlI CACGTG 1 cut(s) 1091
PpsI GAGTC 4 cut(s) 884, 1151, 1702, 1776
Ppu21I YACGTR 1 cut(s) 1091
PspCI CACGTG 1 cut(s) 1091
PspPI GGNCC 5 cut(s) 82, 420, 1318, 1632, 1921
PsrI GAACNNNNNNTAC 2 cut(s) 890, 922
PteI GCGCGC 1 cut(s) 119
RruI TCGCGA 1 cut(s) 1197
RseI CAYNNNNRTG 1 cut(s) 1949
SaqAI TTAA 2 cut(s) 317, 1136
Sau3AI GATC 3 cut(s) 336, 912, 1163
Sau96I GGNCC 5 cut(s) 82, 420, 1318, 1632, 1921
SchI GAGTC 4 cut(s) 885, 1152, 1703, 1777
ScrFI CCNGG 8 cut(s) 917, 950, 1017, 1153, 1245, 1919, 1925, 1926
SfaNI GCATC 8 cut(s) 208, 242, 264, 515, 578, 1287, 1413, 1602
SfcI CTRYAG 1 cut(s) 1961
SinI GGWCC 1 cut(s) 1921
SmaI CCCGGG 1 cut(s) 1926
SmiMI CAYNNNNRTG 1 cut(s) 1949
SmlI CTYRAG 2 cut(s) 1135, 1976
SmoI CTYRAG 2 cut(s) 1135, 1976
SphI GCATGC 1 cut(s) 208
Sse9I AATT 4 cut(s) 739, 768, 1025, 1199
SsiI CCGC 3 cut(s) 253, 1414, 1973
SspI AATATT 1 cut(s) 812
SspMI CTAG 1 cut(s) 1116
StyD4I CCNGG 8 cut(s) 915, 948, 1015, 1151, 1243, 1917, 1923, 1924
StyI CCWWGG 1 cut(s) 469
TaaI ACNGT 2 cut(s) 441, 1629
TaiI ACGT 3 cut(s) 834, 908, 1093
TaqII GACCGA 1 cut(s) 239
TasI AATT 4 cut(s) 739, 768, 1025, 1199
TfiI GAWTC 2 cut(s) 271, 1467
Tru1I TTAA 2 cut(s) 317, 1136
Tru9I TTAA 2 cut(s) 317, 1136
TseFI GTSAC 1 cut(s) 1247
Tsp45I GTSAC 1 cut(s) 1247
TspDTI ATGAA 5 cut(s) 137, 175, 179, 201, 1204
TspMI CCCGGG 1 cut(s) 1924
Van91I CCANNNNNTGG 1 cut(s) 1883
Vha464I CTTAAG 1 cut(s) 1135
VpaK11BI GGWCC 1 cut(s) 1921
XagI CCTNNNNNAGG 1 cut(s) 318
XapI RAATTY 2 cut(s) 1025, 1199
XceI RCATGY 2 cut(s) 208, 1255
XcmI CCANNNNNNNNNTGG 1 cut(s) 868
XmaI CCCGGG 1 cut(s) 1924
XmiI GTMKAC 1 cut(s) 993
XmnI GAANNNNTTC 1 cut(s) 275
XspI CTAG 1 cut(s) 1116
Zsp2I ATGCAT 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.