Rh7DG095400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
8011122 .. 8013736
2615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG095400.1

Sequence Viewer

Length: 246 bp
ATGGTGAAGTTTATGCTGGAGCATCTGCAAAAATCGGGGTGTGGGATATTAGACGGGTCTTGCTGGGCCGTTCATTGCGAGAAGAAGATTGTCGGAGTATACACCCGCCGCGGATGGCCTGTTGCTCAAAACATAAGGGTAGATCATCATCCTGGTGGTGGGCATTGGTTTGCTGCGGGTCTCTCTCCTAATATTCCGGGCAGAAACAGGGTCTCCATGCATAGCAGCCCACATTTTCAGGATTGA

Protein Analysis

81

Amino Acids

9.03

Weight (kDa)

9.35

Isoelectric Point (pI)

57.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000640)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0331021 RchiOBHm_Chr1g0335951 RchiOBHm_Chr1g0338001 RchiOBHm_Chr6g0276241 RchiOBHm_Chr6g0297731 RchiOBHm_Chr7g0188211 RchiOBHm_Chr7g0217921 RchiOBHm_Chr7g0238211
rosa_laevigata RLG00000007457 RLG00000015447 RLG00000019185 RLG00000032916 RLG00000034538
rosa_multiflora Rmu_sc0000923.1_g000008 Rmu_sc0002931.1_g000001 Rmu_sc0006850.1_g000014
rosa_roxburghii Rroxscaffold_1G00021360 Rroxscaffold_1G00022610 Rroxscaffold_1G00022620 Rroxscaffold_1G00025730 Rroxscaffold_1G00029440 Rroxscaffold_1G00029610 Rroxscaffold_1G00032940 Rroxscaffold_1G00034000 Rroxscaffold_2G00087130 Rroxscaffold_2G00093110 Rroxscaffold_2G00097280 Rroxscaffold_2G00121440 Rroxscaffold_3G00225890 Rroxscaffold_3G00238130 Rroxscaffold_3G00241910 Rroxscaffold_3G00267280 Rroxscaffold_4G00295970 Rroxscaffold_4G00299040 Rroxscaffold_4G00303830 Rroxscaffold_4G00305880 Rroxscaffold_5G00335820 Rroxscaffold_5G00343740 Rroxscaffold_5G00346800 Rroxscaffold_5G00348110 Rroxscaffold_5G00371220 Rroxscaffold_5G00383470 Rroxscaffold_5G00387630 Rroxscaffold_6G00388100 Rroxscaffold_6G00395960 Rroxscaffold_6G00397500 Rroxscaffold_6G00405550 Rroxscaffold_7G00195020 Rroxscaffold_7G00217460
rosa_rugosa Rorug02G0515900 Rorug06G0038100.1
rosa_samantha Rh1CG171700 Rh2AG250300 Rh2AG481200 Rh2CG103900 Rh2CG467500 Rh2DG121800 Rh2DG258400 Rh3AG000900 Rh3CG000600 Rh3DG000800 Rh4DG164800 Rh5AG157100 Rh5AG476500 Rh5AG519300 Rh5DG192000 Rh5DG243900 Rh6CG399800 Rh6DG207500 Rh6DG458300 Rh6DG458400 Rh7AG314100 Rh7AG466900 Rh7DG095400
rosa_wichuraiana Rw5G004310 Rw5G049380 Rw6G000590 Rw6G025650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 99
AccII CGCG 1 cut(s) 111
AciI CCGC 4 cut(s) 106, 109, 111, 176
AfiI CCNNNNNNNGG 1 cut(s) 158
AjnI CCWGG 1 cut(s) 151
Alw26I GTCTC 2 cut(s) 185, 217
AoxI GGCC 2 cut(s) 66, 116
ApeKI GCWGC 2 cut(s) 173, 225
AspS9I GGNCC 1 cut(s) 66
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 1 cut(s) 16
BbvI GCAGC 2 cut(s) 160, 237
BccI CCATC 1 cut(s) 108
BceAI ACGGC 1 cut(s) 53
BciT130I CCWGG 1 cut(s) 153
BcnI CCSGG 1 cut(s) 198
BcoDI GTCTC 2 cut(s) 185, 217
BisI GCNGC 3 cut(s) 109, 174, 226
BlsI GCNGC 3 cut(s) 110, 175, 227
Bme1390I CCNGG 2 cut(s) 153, 198
BmgT120I GGNCC 1 cut(s) 66
BmrFI CCNGG 2 cut(s) 153, 198
BmsI GCATC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 147
BsaI GGTCTC 2 cut(s) 185, 217
BsaJI CCNNGG 1 cut(s) 109
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 73
Bse8I GATNNNNATC 1 cut(s) 147
BseBI CCWGG 1 cut(s) 153
BseDI CCNNGG 1 cut(s) 109
BseGI GGATG 2 cut(s) 119, 148
BseJI GATNNNNATC 1 cut(s) 147
BseLI CCNNNNNNNGG 1 cut(s) 158
BseMI GCAATG 1 cut(s) 73
BseXI GCAGC 2 cut(s) 160, 237
BseYI CCCAGC 1 cut(s) 63
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 2 cut(s) 68, 118
BsiSI CCGG 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 158
BsmAI GTCTC 2 cut(s) 185, 217
BsnI GGCC 2 cut(s) 68, 118
Bso31I GGTCTC 2 cut(s) 185, 217
Bsp143I GATC 1 cut(s) 142
BspACI CCGC 4 cut(s) 106, 109, 111, 176
BspANI GGCC 2 cut(s) 68, 118
BspFNI CGCG 1 cut(s) 111
BspTNI GGTCTC 2 cut(s) 185, 217
BsrDI GCAATG 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 109
BssMI GATC 1 cut(s) 142
BssNAI GTATAC 1 cut(s) 100
Bst1107I GTATAC 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 153
BstDSI CCRYGG 1 cut(s) 109
BstF5I GGATG 2 cut(s) 119, 148
BstFNI CGCG 1 cut(s) 111
BstKTI GATC 1 cut(s) 145
BstMAI GTCTC 2 cut(s) 185, 217
BstMBI GATC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 153
BstSCI CCNGG 2 cut(s) 151, 196
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 2 cut(s) 160, 237
BstZ17I GTATAC 1 cut(s) 100
BsuRI GGCC 2 cut(s) 68, 118
BtgI CCRYGG 1 cut(s) 109
BtsCI GGATG 2 cut(s) 119, 148
Cfr13I GGNCC 1 cut(s) 66
Cfr42I CCGCGG 1 cut(s) 112
CviAII CATG 1 cut(s) 217
CviJI RGCY 3 cut(s) 68, 118, 228
CviKI_1 RGCY 3 cut(s) 68, 118, 228
DpnI GATC 1 cut(s) 144
DpnII GATC 1 cut(s) 142
Eco31I GGTCTC 2 cut(s) 185, 217
EcoRII CCWGG 1 cut(s) 151
EcoT22I ATGCAT 1 cut(s) 222
FaeI CATG 1 cut(s) 220
FaiI YATR 5 cut(s) 14, 100, 134, 218, 222
FatI CATG 1 cut(s) 216
FauI CCCGC 2 cut(s) 113, 169
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 3 cut(s) 109, 174, 226
FokI GGATG 2 cut(s) 126, 135
Fsp4HI GCNGC 3 cut(s) 109, 174, 226
GluI GCNGC 3 cut(s) 109, 174, 226
GsaI CCCAGC 1 cut(s) 67
GsuI CTGGAG 1 cut(s) 38
HaeIII GGCC 2 cut(s) 68, 118
HapII CCGG 1 cut(s) 197
Hin1II CATG 1 cut(s) 220
HpaII CCGG 1 cut(s) 197
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 1 cut(s) 95
Hpy188III TCNNGA 1 cut(s) 239
Hpy8I GTNNAC 1 cut(s) 100
HpyCH4V TGCA 2 cut(s) 28, 220
Hsp92II CATG 1 cut(s) 220
KspI CCGCGG 1 cut(s) 112
Kzo9I GATC 1 cut(s) 142
LmnI GCTCC 1 cut(s) 19
LpnPI CCDG 8 cut(s) 2, 49, 132, 138, 165, 193, 210, 224
Lsp1109I GCAGC 2 cut(s) 160, 237
LweI GCATC 1 cut(s) 31
MalI GATC 1 cut(s) 144
MboI GATC 1 cut(s) 142
MboII GAAGA 2 cut(s) 94, 97
MmeI TCCRAC 1 cut(s) 73
Mph1103I ATGCAT 1 cut(s) 222
MslI CAYNNNNRTG 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 111
MspI CCGG 1 cut(s) 197
MspR9I CCNGG 2 cut(s) 153, 198
MvaI CCWGG 1 cut(s) 153
MvnI CGCG 1 cut(s) 111
NciI CCSGG 1 cut(s) 198
NdeII GATC 1 cut(s) 142
NlaIII CATG 1 cut(s) 220
NsiI ATGCAT 1 cut(s) 222
PkrI GCNGC 3 cut(s) 110, 175, 227
Psp6I CCWGG 1 cut(s) 151
PspFI CCCAGC 1 cut(s) 63
PspGI CCWGG 1 cut(s) 151
PspPI GGNCC 1 cut(s) 66
RseI CAYNNNNRTG 1 cut(s) 153
SacII CCGCGG 1 cut(s) 112
SatI GCNGC 3 cut(s) 109, 174, 226
Sau3AI GATC 1 cut(s) 142
Sau96I GGNCC 1 cut(s) 66
ScrFI CCNGG 2 cut(s) 153, 198
SfaNI GCATC 1 cut(s) 31
Sfr303I CCGCGG 1 cut(s) 112
SgrBI CCGCGG 1 cut(s) 112
SmiMI CAYNNNNRTG 1 cut(s) 153
SsiI CCGC 4 cut(s) 106, 109, 111, 176
SspI AATATT 1 cut(s) 193
StyD4I CCNGG 2 cut(s) 151, 196
TauI GCSGC 1 cut(s) 111
TseI GCWGC 2 cut(s) 173, 225
TspDTI ATGAA 1 cut(s) 62
XmiI GTMKAC 1 cut(s) 99
Zsp2I ATGCAT 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.