Rorug03G0154000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000475
Physical Location & Seq
Forward (+)
12659837 .. 12662588
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0154000.1

Sequence Viewer

Length: 1221 bp
ATGGCCGCCGTCGCAGCTGTCCGCCCCCTCGTCACCGTCCAAGCCTTGGAAGGCGACATGGCCACCGACCAATCCCAGACCGCCCCTCTCCCTGACGTCATGAAGGCCTCTATCCGACCCGATATCGTCACCTTCGTCCACTCCAACATCTCCAAGAACAGCCGCCAGGCCTACGCCGTCTCCAAGAAGGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGTACCGGCCGCGCCGTCTCCCGTATCCCCCGCGTTCCCGGCGGCGGCACCCACCGTGCCGGCCAGGGAGCCTTCGGGAACATGTGCCGCGGCGGAAGGATGTTCGCTCCGACCAAGATCTGGCGCCGGTGGCACCGCAAGATCAACGTGAACCAGAAGAGGTACGCTATGGTCTCGGCCATTGCCGCGTCGTCGGTGCCGTCTCTGGTCATGGCTAGGGGTCACAAAATCGAGACTGTTCCCGAATTGCCCTTGGTCATCAGTGACTCTGCCGAGAGCGTGGAGAAGACTTCTGGAGCTATCAAGGTGCTGCAGCAGATTGGAGCTTATGCCGATGCGGAGAAGGCTAAGGACAGCCATTCGATTCGGCCGGGGAAGGGGAAGATGAGGAACCGCCGCTACATCAACCGCAAGGGTCCTCTGATTGTGTACGGCAGCGAGGGGGCTAAGCTTGTGAAGTCGTTTAGGAACATTCCAGGTGTTGATATCATCAATGTGGAGAGGCTCAATTTGCTGAAGCTGGCACCTGGTGGGCATCTTGGCCGGTTCGTCATCTGGACCAAGTCGGCTTTTGAGAAGCTCGACTCTATCTATGGGTCGTTCGACAAGGCGTCTGAGAAGAAGAAGGGGTATGTGTTGCCTAGGGCTAAGATGGTGAATGCTGACCTTGCTAGGATCATCAACTCCGACGAGGTGCAGTCTGTTGTTAGGCCTATTAAGAAGGATGTCAAGAGGGCGCCATTGAAGAAGAACCCATTGAAGAACCTCAACACCATGCTTAGGTTGAACCCGTACGCCAAGACCGCAAAGAGGATGGCTCTTTTGGCAGAGGAACAACGCCTCAAGTCTAAGAACGAGAAGCTCGAAAAGAAGAGGAAGGTTACCAAGGAGGAAGCTACTACGATCAAGGCTGCTGGAAAGGCCTGGTACCAAACTATGATCTCCGACAGTGATTACACAGAGTTCGATGTCTTCCAAAAGTGGCTTGGTGTCTCCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

406

Amino Acids

44.92

Weight (kDa)

10.31

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L4 PF00573 30 - 269 1.1e-35 Ribosomal protein L4/L1 family
Ribos_L4_asso_C PF14374 282 - 355 3.8e-29 60S ribosomal protein L4 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000475)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G23830 AT1G23840 AT1G23850
fragaria_vesca FvH4_3g33230 FvH4_4g34710 FvH4_4g34711 FvH4_4g34720 FvH4_4g34730 FvH4_4g34740 FvH4_4g34760 FvH4_4g34761 FvH4_6g20500 FvH4_6g20520
malus_domestica MD13G1090000.v1.1 MD16G1090300.v1.1 MD16G1090400.v1.1 MD16G1090500.v1.1 MD16G1090600.v1.1
prunus_persica Prupe.1G255400_v2.0.a1 Prupe.1G255600_v2.0.a1 Prupe.1G255700_v2.0.a1 Prupe.1G255800_v2.0.a1
pyrus_communis pycom16g07740 pycom16g07760
rosa_chinensis RchiOBHm_Chr3g0476381 RchiOBHm_Chr4g0444081 RchiOBHm_Chr4g0444091 RchiOBHm_Chr4g0444101
rosa_laevigata RLG00000005856 RLG00000005857 RLG00000005858 RLG00000005859 RLG00000005860 RLG00000023773 RLG00000023775
rosa_multiflora Rmu_co8429785.1_g000001 Rmu_sc0000114.1_g000007 Rmu_sc0002177.1_g000009 Rmu_sc0012638.1_g000002 Rmu_sc0012638.1_g000003
rosa_roxburghii Rroxscaffold_5G00384630 Rroxscaffold_5G00384650 Rroxscaffold_5G00384660 Rroxscaffold_5G00384670 Rroxscaffold_5G00384680 Rroxscaffold_5G00384690 Rroxscaffold_6G00405320 Rroxscaffold_6G00405350
rosa_rugosa Rorug03G0153900 Rorug03G0154000 Rorug04G0349500 Rorug04G0349500 Rorug04G0349500
rosa_samantha Rh3AG205100 Rh3BG236700 Rh3CG231200 Rh3DG231000 Rh4AG410200 Rh4AG410300 Rh4AG410400 Rh4AG410500 Rh4AG410600 Rh4BG421300 Rh4BG421400 Rh4BG421500 Rh4BG421600 Rh4BG421700 Rh4BG421800 Rh4BG421900 Rh4BG422000 Rh4CG435700 Rh4CG435800 Rh4CG435900 Rh4CG436000 Rh4CG436100 Rh4CG436200 Rh4CG436300 Rh4CG436400 Rh4DG416600 Rh4DG416800 Rh4DG416900 Rh4DG417000 Rh4DG417100 Rh4DG417200 Rh4DG417300
rosa_wichuraiana Rw3G018640 Rw4G035240 Rw4G035250 Rw4G035260 Rw4G035270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 99
Acc65I GGTACC 2 cut(s) 221, 1146
AccB1I GGYRCC 8 cut(s) 221, 266, 342, 351, 415, 742, 955, 1146
AccB7I CCANNNNNTGG 2 cut(s) 46, 339
AccII CGCG 4 cut(s) 231, 252, 309, 407
AclWI GGATC 1 cut(s) 902
AcoI YGGCCR 8 cut(s) 3, 60, 193, 226, 280, 396, 587, 760
AcuI CTGAAG 1 cut(s) 755
AcyI GRCGYC 4 cut(s) 96, 343, 830, 956
AdeI CACNNNGTG 1 cut(s) 749
AfaI GTAC 5 cut(s) 223, 383, 650, 1013, 1148
AfiI CCNNNNNNNGG 7 cut(s) 46, 216, 263, 339, 596, 999, 1029
AflIII ACRYGT 1 cut(s) 300
AgsI TTSAA 3 cut(s) 964, 979, 1006
AhdI GACNNNNNGTC 1 cut(s) 829
AjnI CCWGG 6 cut(s) 165, 215, 282, 694, 745, 1142
AluBI AGCT 8 cut(s) 17, 518, 545, 670, 739, 799, 1081, 1115
AluI AGCT 8 cut(s) 17, 518, 545, 670, 739, 799, 1081, 1115
Alw26I GTCTC 6 cut(s) 184, 241, 397, 426, 446, 1216
AlwI GGATC 1 cut(s) 902
ApeKI GCWGC 5 cut(s) 14, 529, 532, 654, 1130
Asp718I GGTACC 2 cut(s) 221, 1146
AspA2I CCTAGG 1 cut(s) 860
AspLEI GCGC 3 cut(s) 233, 345, 958
AspS9I GGNCC 2 cut(s) 635, 777
AsuC2I CCSGG 2 cut(s) 258, 591
AsuHPI GGTGA 3 cut(s) 25, 121, 886
AvaII GGWCC 2 cut(s) 635, 777
AvrII CCTAGG 1 cut(s) 860
BalI TGGCCA 1 cut(s) 62
BanI GGYRCC 8 cut(s) 221, 266, 342, 351, 415, 742, 955, 1146
BbsI GAAGAC 2 cut(s) 512, 1183
BbvI GCAGC 5 cut(s) 26, 516, 544, 666, 1117
BccI CCATC 2 cut(s) 865, 1027
BceAI ACGGC 4 cut(s) 161, 218, 403, 667
BciT130I CCWGG 6 cut(s) 167, 217, 284, 696, 747, 1144
BciVI GTATCC 1 cut(s) 254
BcnI CCSGG 2 cut(s) 258, 591
BcoDI GTCTC 6 cut(s) 184, 241, 397, 426, 446, 1216
BfaI CTAG 3 cut(s) 435, 861, 891
BfmI CTRYAG 1 cut(s) 530
BfoI RGCGCY 2 cut(s) 346, 959
BfuI GTATCC 1 cut(s) 254
BglII AGATCT 1 cut(s) 336
BlnI CCTAGG 1 cut(s) 860
BlpI GCTNAGC 1 cut(s) 666
Bme1390I CCNGG 8 cut(s) 167, 217, 258, 284, 591, 696, 747, 1144
Bme18I GGWCC 2 cut(s) 635, 777
BmeRI GACNNNNNGTC 1 cut(s) 829
BmgT120I GGNCC 2 cut(s) 635, 777
BmrFI CCNGG 8 cut(s) 167, 217, 258, 284, 591, 696, 747, 1144
BmrI ACTGGG 1 cut(s) 1210
BmsI GCATC 2 cut(s) 544, 763
BmuI ACTGGG 1 cut(s) 1210
BpiI GAAGAC 2 cut(s) 512, 1183
BplI GAGNNNNNCTC 2 cut(s) 1021, 1053
BpmI CTGGAG 1 cut(s) 534
Bpu10I CCTNAGC 2 cut(s) 567, 998
Bpu1102I GCTNAGC 1 cut(s) 666
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 2 cut(s) 258, 591
BsaHI GRCGYC 4 cut(s) 96, 343, 830, 956
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 8 cut(s) 45, 216, 283, 307, 471, 590, 860, 1104
BsaXI ACNNNNNCTCC 4 cut(s) 164, 188, 194, 218
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 216, 263, 339, 596, 999, 1029
Bse118I RCCGGY 5 cut(s) 191, 224, 278, 345, 762
Bse1I ACTGG 1 cut(s) 1216
Bse3DI GCAATG 1 cut(s) 399
BseBI CCWGG 6 cut(s) 167, 217, 284, 696, 747, 1144
BseDI CCNNGG 8 cut(s) 45, 216, 283, 307, 471, 590, 860, 1104
BseGI GGATG 3 cut(s) 324, 949, 1038
BseLI CCNNNNNNNGG 7 cut(s) 46, 216, 263, 339, 596, 999, 1029
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 1 cut(s) 825
BseNI ACTGG 1 cut(s) 1216
BseX3I CGGCCG 2 cut(s) 226, 587
BseXI GCAGC 5 cut(s) 26, 516, 544, 666, 1117
BsgI GTGCAG 1 cut(s) 935
Bsh1236I CGCG 4 cut(s) 231, 252, 309, 407
Bsh1285I CGRYCG 2 cut(s) 229, 590
BshNI GGYRCC 8 cut(s) 221, 266, 342, 351, 415, 742, 955, 1146
BsiEI CGRYCG 2 cut(s) 229, 590
BsiSI CCGG 7 cut(s) 192, 225, 258, 279, 346, 590, 763
BsiWI CGTACG 1 cut(s) 1011
BslI CCNNNNNNNGG 7 cut(s) 46, 216, 263, 339, 596, 999, 1029
BsmAI GTCTC 6 cut(s) 184, 241, 397, 426, 446, 1216
BsmBI CGTCTC 3 cut(s) 184, 241, 426
BsmI GAATGC 1 cut(s) 883
Bso31I GGTCTC 1 cut(s) 397
Bsp143I GATC 5 cut(s) 336, 360, 894, 1122, 1158
Bsp1720I GCTNAGC 1 cut(s) 666
BspCNI CTCAG 1 cut(s) 826
BspFNI CGCG 4 cut(s) 231, 252, 309, 407
BspHI TCATGA 1 cut(s) 99
BspMAI CTGCAG 1 cut(s) 534
BspPI GGATC 1 cut(s) 902
BspT107I GGYRCC 8 cut(s) 221, 266, 342, 351, 415, 742, 955, 1146
BspTNI GGTCTC 1 cut(s) 397
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 5 cut(s) 191, 224, 278, 345, 762
BsrI ACTGG 1 cut(s) 1216
BssAI RCCGGY 5 cut(s) 191, 224, 278, 345, 762
BssECI CCNNGG 8 cut(s) 45, 216, 283, 307, 471, 590, 860, 1104
BssMI GATC 5 cut(s) 336, 360, 894, 1122, 1158
BssNI GRCGYC 4 cut(s) 96, 343, 830, 956
BssT1I CCWWGG 4 cut(s) 45, 471, 860, 1104
Bst2UI CCWGG 6 cut(s) 167, 217, 284, 696, 747, 1144
Bst4CI ACNGT 4 cut(s) 37, 275, 457, 1169
Bst6I CTCTTC 2 cut(s) 371, 1085
BstACI GRCGYC 4 cut(s) 96, 343, 830, 956
BstC8I GCNNGC 3 cut(s) 193, 280, 741
BstDEI CTNAG 6 cut(s) 567, 666, 834, 867, 998, 1068
BstDSI CCRYGG 1 cut(s) 307
BstEII GGTNACC 1 cut(s) 1099
BstF5I GGATG 3 cut(s) 324, 949, 1038
BstFNI CGCG 4 cut(s) 231, 252, 309, 407
BstH2I RGCGCY 2 cut(s) 346, 959
BstHHI GCGC 3 cut(s) 233, 345, 958
BstKTI GATC 5 cut(s) 339, 363, 897, 1125, 1161
BstMAI GTCTC 6 cut(s) 184, 241, 397, 426, 446, 1216
BstMBI GATC 5 cut(s) 336, 360, 894, 1122, 1158
BstMCI CGRYCG 2 cut(s) 229, 590
BstNI CCWGG 6 cut(s) 167, 217, 284, 696, 747, 1144
BstNSI RCATGY 1 cut(s) 304
BstPI GGTNACC 1 cut(s) 1099
BstSCI CCNGG 8 cut(s) 165, 215, 256, 282, 589, 694, 745, 1142
BstSFI CTRYAG 1 cut(s) 530
BstUI CGCG 4 cut(s) 231, 252, 309, 407
BstV1I GCAGC 5 cut(s) 26, 516, 544, 666, 1117
BstV2I GAAGAC 2 cut(s) 512, 1183
BstX2I RGATCY 1 cut(s) 336
BstYI RGATCY 1 cut(s) 336
BstZI CGGCCG 2 cut(s) 226, 587
BsuI GTATCC 1 cut(s) 254
BtgI CCRYGG 1 cut(s) 307
BtsCI GGATG 3 cut(s) 324, 949, 1038
BtsIMutI CAGTG 2 cut(s) 487, 1174
Cac8I GCNNGC 3 cut(s) 193, 280, 741
CciI TCATGA 1 cut(s) 99
CfoI GCGC 3 cut(s) 233, 345, 958
Cfr10I RCCGGY 5 cut(s) 191, 224, 278, 345, 762
Cfr13I GGNCC 2 cut(s) 635, 777
Cfr42I CCGCGG 1 cut(s) 310
CseI GACGC 2 cut(s) 396, 819
CsiI ACCWGGT 1 cut(s) 745
Csp6I GTAC 5 cut(s) 222, 382, 649, 1012, 1147
CviAII CATG 5 cut(s) 58, 100, 301, 430, 994
CviQI GTAC 5 cut(s) 222, 382, 649, 1012, 1147
DdeI CTNAG 6 cut(s) 567, 666, 834, 867, 998, 1068
DinI GGCGCC 2 cut(s) 344, 957
DpnI GATC 5 cut(s) 338, 362, 896, 1124, 1160
DpnII GATC 5 cut(s) 336, 360, 894, 1122, 1158
DraIII CACNNNGTG 1 cut(s) 749
DriI GACNNNNNGTC 1 cut(s) 829
EaeI YGGCCR 8 cut(s) 3, 60, 193, 226, 280, 396, 587, 760
EagI CGGCCG 2 cut(s) 226, 587
Eam1104I CTCTTC 2 cut(s) 371, 1085
Eam1105I GACNNNNNGTC 1 cut(s) 829
EarI CTCTTC 2 cut(s) 371, 1085
EciI GGCGGA 3 cut(s) 11, 196, 327
EclXI CGGCCG 2 cut(s) 226, 587
Eco130I CCWWGG 4 cut(s) 45, 471, 860, 1104
Eco147I AGGCCT 4 cut(s) 107, 170, 931, 1142
Eco31I GGTCTC 1 cut(s) 397
Eco32I GATATC 2 cut(s) 124, 706
Eco47I GGWCC 2 cut(s) 635, 777
Eco52I CGGCCG 2 cut(s) 226, 587
Eco57I CTGAAG 1 cut(s) 755
Eco91I GGTNACC 1 cut(s) 1099
EcoO109I RGGNCCY 1 cut(s) 635
EcoO65I GGTNACC 1 cut(s) 1099
EcoRII CCWGG 6 cut(s) 165, 215, 282, 694, 745, 1142
EcoRV GATATC 2 cut(s) 124, 706
EcoT14I CCWWGG 4 cut(s) 45, 471, 860, 1104
EgeI GGCGCC 2 cut(s) 344, 957
EheI GGCGCC 2 cut(s) 344, 957
ErhI CCWWGG 4 cut(s) 45, 471, 860, 1104
Esp3I CGTCTC 3 cut(s) 184, 241, 426
FaeI CATG 5 cut(s) 61, 103, 304, 433, 997
FatI CATG 5 cut(s) 57, 99, 300, 429, 993
FauI CCCGC 1 cut(s) 257
FokI GGATG 3 cut(s) 331, 956, 1045
FseI GGCCGGCC 1 cut(s) 195
FspBI CTAG 3 cut(s) 435, 861, 891
GlaI GCGC 3 cut(s) 232, 344, 957
GsuI CTGGAG 1 cut(s) 534
HaeII RGCGCY 2 cut(s) 346, 959
HapII CCGG 7 cut(s) 192, 225, 258, 279, 346, 590, 763
HgaI GACGC 2 cut(s) 396, 819
HhaI GCGC 3 cut(s) 233, 345, 958
Hin1I GRCGYC 4 cut(s) 96, 343, 830, 956
Hin1II CATG 5 cut(s) 61, 103, 304, 433, 997
Hin6I GCGC 3 cut(s) 231, 343, 956
HinP1I GCGC 3 cut(s) 231, 343, 956
HindIII AAGCTT 1 cut(s) 668
HinfI GANTC 4 cut(s) 212, 485, 583, 803
HpaII CCGG 7 cut(s) 192, 225, 258, 279, 346, 590, 763
HphI GGTGA 3 cut(s) 25, 121, 886
Hpy166II GTNNAC 3 cut(s) 139, 370, 649
Hpy188I TCNGA 6 cut(s) 116, 330, 642, 835, 907, 1165
Hpy188III TCNNGA 7 cut(s) 100, 295, 451, 461, 513, 775, 949
Hpy8I GTNNAC 3 cut(s) 139, 370, 649
Hpy99I CGWCG 4 cut(s) 14, 412, 415, 911
HpyCH4III ACNGT 4 cut(s) 37, 275, 457, 1169
HpyCH4IV ACGT 2 cut(s) 96, 366
HpyCH4V TGCA 2 cut(s) 532, 916
HpyF3I CTNAG 6 cut(s) 567, 666, 834, 867, 998, 1068
HpySE526I ACGT 2 cut(s) 96, 366
Hsp92I GRCGYC 4 cut(s) 96, 343, 830, 956
Hsp92II CATG 5 cut(s) 61, 103, 304, 433, 997
HspAI GCGC 3 cut(s) 231, 343, 956
KasI GGCGCC 2 cut(s) 342, 955
KpnI GGTACC 2 cut(s) 225, 1150
KroI GCCGGC 2 cut(s) 191, 278
KroNI GCCGGC 2 cut(s) 193, 280
KspI CCGCGG 1 cut(s) 310
Kzo9I GATC 5 cut(s) 336, 360, 894, 1122, 1158
LmnI GCTCC 4 cut(s) 287, 331, 515, 542
Lsp1109I GCAGC 5 cut(s) 26, 516, 544, 666, 1117
LweI GCATC 2 cut(s) 544, 763
MabI ACCWGGT 1 cut(s) 745
MaeI CTAG 3 cut(s) 435, 861, 891
MaeII ACGT 2 cut(s) 96, 366
MaeIII GTNAC 5 cut(s) 31, 127, 440, 482, 1099
MalI GATC 5 cut(s) 338, 362, 896, 1124, 1160
MboI GATC 5 cut(s) 336, 360, 894, 1122, 1158
MflI RGATCY 1 cut(s) 336
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 2 cut(s) 464, 727
MluNI TGGCCA 1 cut(s) 62
Mly113I GGCGCC 2 cut(s) 343, 956
MlyI GAGTC 3 cut(s) 221, 479, 797
MmeI TCCRAC 5 cut(s) 139, 168, 353, 930, 1188
Mox20I TGGCCA 1 cut(s) 62
MroNI GCCGGC 2 cut(s) 191, 278
MscI TGGCCA 1 cut(s) 62
MseI TTAA 1 cut(s) 936
MslI CAYNNNNRTG 1 cut(s) 713
Msp20I TGGCCA 1 cut(s) 62
MspA1I CMGCKG 2 cut(s) 17, 309
MspI CCGG 7 cut(s) 192, 225, 258, 279, 346, 590, 763
MspR9I CCNGG 8 cut(s) 167, 217, 258, 284, 591, 696, 747, 1144
Mva1269I GAATGC 1 cut(s) 883
MvaI CCWGG 6 cut(s) 167, 217, 284, 696, 747, 1144
MvnI CGCG 4 cut(s) 231, 252, 309, 407
NaeI GCCGGC 2 cut(s) 193, 280
NarI GGCGCC 2 cut(s) 343, 956
NciI CCSGG 2 cut(s) 258, 591
NdeII GATC 5 cut(s) 336, 360, 894, 1122, 1158
NgoMIV GCCGGC 2 cut(s) 191, 278
NlaIII CATG 5 cut(s) 61, 103, 304, 433, 997
NmeAIII GCCGAG 3 cut(s) 235, 374, 517
NmuCI GTSAC 4 cut(s) 31, 127, 440, 482
NspI RCATGY 1 cut(s) 304
PagI TCATGA 1 cut(s) 99
PceI AGGCCT 4 cut(s) 107, 170, 931, 1142
PciI ACATGT 1 cut(s) 300
PcsI WCGNNNNNNNCGW 3 cut(s) 132, 416, 1080
PctI GAATGC 1 cut(s) 883
PdiI GCCGGC 2 cut(s) 193, 280
PfeI GAWTC 1 cut(s) 583
Pfl23II CGTACG 1 cut(s) 1011
PflFI GACNNNGTC 1 cut(s) 781
PflMI CCANNNNNTGG 2 cut(s) 46, 339
PleI GAGTC 3 cut(s) 220, 479, 797
PluTI GGCGCC 2 cut(s) 346, 959
PpsI GAGTC 3 cut(s) 220, 479, 797
PpuMI RGGWCCY 1 cut(s) 635
PscI ACATGT 1 cut(s) 300
Psp5II RGGWCCY 1 cut(s) 635
Psp6I CCWGG 6 cut(s) 165, 215, 282, 694, 745, 1142
PspEI GGTNACC 1 cut(s) 1099
PspGI CCWGG 6 cut(s) 165, 215, 282, 694, 745, 1142
PspLI CGTACG 1 cut(s) 1011
PspPI GGNCC 2 cut(s) 635, 777
PspPPI RGGWCCY 1 cut(s) 635
PsrI GAACNNNNNNTAC 2 cut(s) 602, 634
PstI CTGCAG 1 cut(s) 534
PsuI RGATCY 1 cut(s) 336
PsyI GACNNNGTC 1 cut(s) 781
PvuII CAGCTG 1 cut(s) 17
RigI GGCCGGCC 1 cut(s) 195
RsaI GTAC 5 cut(s) 223, 383, 650, 1013, 1148
RsaNI GTAC 5 cut(s) 222, 382, 649, 1012, 1147
RseI CAYNNNNRTG 1 cut(s) 713
SacII CCGCGG 1 cut(s) 310
SaqAI TTAA 1 cut(s) 936
Sau3AI GATC 5 cut(s) 336, 360, 894, 1122, 1158
Sau96I GGNCC 2 cut(s) 635, 777
SchI GAGTC 3 cut(s) 221, 479, 797
ScrFI CCNGG 8 cut(s) 167, 217, 258, 284, 591, 696, 747, 1144
SexAI ACCWGGT 1 cut(s) 745
SfaNI GCATC 2 cut(s) 544, 763
SfcI CTRYAG 1 cut(s) 530
SfoI GGCGCC 2 cut(s) 344, 957
Sfr303I CCGCGG 1 cut(s) 310
SgrAI CRCCGGYG 1 cut(s) 345
SgrBI CCGCGG 1 cut(s) 310
SinI GGWCC 2 cut(s) 635, 777
SmiMI CAYNNNNRTG 1 cut(s) 713
SmlI CTYRAG 1 cut(s) 1061
SmoI CTYRAG 1 cut(s) 1061
Sse9I AATT 2 cut(s) 464, 727
SseBI AGGCCT 4 cut(s) 107, 170, 931, 1142
SspDI GGCGCC 2 cut(s) 342, 955
SspMI CTAG 3 cut(s) 435, 861, 891
StuI AGGCCT 4 cut(s) 107, 170, 931, 1142
StyD4I CCNGG 8 cut(s) 165, 215, 256, 282, 589, 694, 745, 1142
StyI CCWWGG 4 cut(s) 45, 471, 860, 1104
TaaI ACNGT 4 cut(s) 37, 275, 457, 1169
TaiI ACGT 2 cut(s) 99, 369
TaqI TCGA 6 cut(s) 450, 581, 801, 822, 1083, 1185
TasI AATT 2 cut(s) 464, 727
TauI GCSGC 9 cut(s) 8, 165, 231, 264, 267, 309, 312, 407, 618
TfiI GAWTC 1 cut(s) 583
Tru1I TTAA 1 cut(s) 936
Tru9I TTAA 1 cut(s) 936
TscAI CASTG 2 cut(s) 487, 1174
TseFI GTSAC 4 cut(s) 31, 127, 440, 482
TseI GCWGC 5 cut(s) 14, 529, 532, 654, 1130
Tsp45I GTSAC 4 cut(s) 31, 127, 440, 482
TspDTI ATGAA 1 cut(s) 116
TspRI CASTG 2 cut(s) 487, 1174
Tth111I GACNNNGTC 1 cut(s) 781
Van91I CCANNNNNTGG 2 cut(s) 46, 339
VpaK11BI GGWCC 2 cut(s) 635, 777
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 1202
XmaJI CCTAGG 1 cut(s) 860
XspI CTAG 3 cut(s) 435, 861, 891
ZraI GACGTC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.