AT2G30650

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13053482 .. 13056384
2903 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30650.1

Sequence Viewer

Length: 1137 bp
ATGGCATCTCACTCTCAGGTTTTGGTGGAAGAGAAATCGAGCGTTAGAATCTTGACATTTAACAGACCCAAGCAGCTTAATGCTCTGTCCTTCCACATGGTCTCTCGGTTGTTGCAACTGTTCCTTGCATATGAAGAAGACCCTAGTGTGAAACTTGTCGTCCTAAAGGGTCAGGGAAGAGCCTTTTCTGCTGGTGGGGACATTCCACCTATTGTTCGTGATATCCTACAAGGCAAACTGATACGCGGTGCCCATTACTTCAAAGTTGGATACACGCTCAACTATGTTTTGTCCACGTATAGAAAACCTCAGGTTTCAATTTTGAATGGTATTGTCATGGGAGGTGGAGCTGGTCTCTCTACCAATGGTCGATTTCGTATTGCAACTGAGAACACGGTTTTCGCAATGCCTGAGACAGCTCTAGGGCTCTTTCCAGATGTAGGGGCCTCTTACTTCTTGTCAAGACTCCCTGGATTTTTTGGAGAGTATGTTGGCCTTACAGGAGCTAGGTTAGATGGCGCCGAAATGCTTGCATGTGGTCTTGCAACTCATTTTGTGCCTTCAATAAGTTTGACTGCATTAGAAGCAGAGCTTTACAAAGTTGGTTCAAGTAATCAAACCTTTATCTCAACAATTCTCGATGCATACGCTGAGTATCCGCACCTGAACCAGCATAGTTCTTACCACAGGTTAGATGTTATTGATAGGTGCTTCTCGAAAAGAACAGTGGAGGAAATTTTCTCTGCACTTGAGAGAGAGGTCACACAAAAACCAAACGATTGGCTCTTAGCTACCATTCAAGCATTGGAGAAGGCTTCACCATCATGCCTTAAAATCTCGCTAAGATCGATAAGAGAAGGAAGATTGCAAGGGGTGGGGCAGTGTCTTATCCGTGAGTATAGAATGGTGTGTCATGTGATGAAGGGAGACATAAGCAAAGACTTTGTGGAGGGGTGCAGAGCAGTATTGATAGACAAAGATAGGAATCCAAAGTGGCAGCCAAGGCGACTCGAGGACGTGACGGATAGCATGGTAGATCAGTACTTTGAGAGAGTGGAGGATGAGGAGGGATGGGAGGATCTTAAGTTTCCGCCAAGGAACAACTTGCCTGCTTTAGCAATCGCAGCAAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

378

Amino Acids

42.26

Weight (kDa)

7.63

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_1 PF00378 10 - 193 1.5e-30 Enoyl-CoA hydratase/isomerase
ECH_2 PF16113 15 - 349 6.7e-125 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 248, 518
AccII CGCG 1 cut(s) 246
AciI CCGC 3 cut(s) 246, 659, 1091
AclWI GGATC 1 cut(s) 1086
AcsI RAATTY 1 cut(s) 735
AcyI GRCGYC 1 cut(s) 519
AfaI GTAC 1 cut(s) 1043
AfiI CCNNNNNNNGG 1 cut(s) 440
AflII CTTAAG 1 cut(s) 1082
AgsI TTSAA 6 cut(s) 262, 318, 325, 564, 609, 800
AjiI CACGTC 1 cut(s) 1018
AjnI CCWGG 1 cut(s) 469
AluBI AGCT 7 cut(s) 76, 350, 419, 506, 592, 791, 1132
AluI AGCT 7 cut(s) 76, 350, 419, 506, 592, 791, 1132
Alw26I GTCTC 4 cut(s) 106, 359, 407, 921
AlwI GGATC 1 cut(s) 1086
Ama87I CYCGRG 1 cut(s) 1010
AoxI GGCC 2 cut(s) 444, 493
ApeKI GCWGC 3 cut(s) 73, 997, 1124
ApoI RAATTY 1 cut(s) 735
AspLEI GCGC 1 cut(s) 521
AspS9I GGNCC 1 cut(s) 444
AsuHPI GGTGA 1 cut(s) 810
AvaI CYCGRG 1 cut(s) 1010
AxyI CCTNAGG 1 cut(s) 309
BaeGI GKGCMC 1 cut(s) 253
BanI GGYRCC 2 cut(s) 248, 518
BanII GRGCYC 1 cut(s) 429
BbsI GAAGAC 1 cut(s) 144
BbvI GCAGC 2 cut(s) 85, 1009
BccI CCATC 3 cut(s) 509, 829, 1065
BcgI CGANNNNNNTGC 2 cut(s) 512, 546
BciT130I CCWGG 1 cut(s) 471
BciVI GTATCC 2 cut(s) 263, 666
BcoDI GTCTC 4 cut(s) 106, 359, 407, 921
BfaI CTAG 3 cut(s) 144, 422, 507
BfoI RGCGCY 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 1082
BfuI GTATCC 2 cut(s) 263, 666
BisI GCNGC 3 cut(s) 74, 998, 1125
BlsI GCNGC 3 cut(s) 75, 999, 1126
BmcAI AGTACT 1 cut(s) 1043
Bme1390I CCNGG 1 cut(s) 471
BmeT110I CYCGRG 1 cut(s) 1010
BmgBI CACGTC 1 cut(s) 1018
BmgT120I GGNCC 1 cut(s) 444
BmiI GGNNCC 3 cut(s) 250, 445, 520
BmrFI CCNGG 1 cut(s) 471
BmsI GCATC 2 cut(s) 14, 631
BpiI GAAGAC 1 cut(s) 144
BplI GAGNNNNNCTC 2 cut(s) 339, 371
BpuEI CTTGAG 1 cut(s) 770
Bsa29I ATCGAT 1 cut(s) 848
BsaAI YACGTR 1 cut(s) 297
BsaBI GATNNNNATC 1 cut(s) 984
BsaHI GRCGYC 1 cut(s) 519
BsaI GGTCTC 2 cut(s) 106, 359
BsaJI CCNNGG 3 cut(s) 469, 1001, 1094
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 1 cut(s) 440
Bse21I CCTNAGG 1 cut(s) 309
Bse3DI GCAATG 1 cut(s) 411
Bse8I GATNNNNATC 1 cut(s) 984
BseBI CCWGG 1 cut(s) 471
BseCI ATCGAT 1 cut(s) 848
BseDI CCNNGG 3 cut(s) 469, 1001, 1094
BseGI GGATG 2 cut(s) 1066, 1076
BseJI GATNNNNATC 1 cut(s) 984
BseLI CCNNNNNNNGG 1 cut(s) 440
BseMI GCAATG 1 cut(s) 411
BseMII CTCAG 5 cut(s) 29, 323, 378, 402, 642
BseRI GAGGAG 1 cut(s) 1079
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 2 cut(s) 85, 1009
BsgI GTGCAG 2 cut(s) 729, 976
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 2 cut(s) 446, 495
BshNI GGYRCC 2 cut(s) 248, 518
BshVI ATCGAT 1 cut(s) 848
BsiHKCI CYCGRG 1 cut(s) 1010
BslFI GGGAC 1 cut(s) 212
BslI CCNNNNNNNGG 1 cut(s) 440
BsmAI GTCTC 4 cut(s) 106, 359, 407, 921
BsmFI GGGAC 1 cut(s) 212
BsnI GGCC 2 cut(s) 446, 495
Bso31I GGTCTC 2 cut(s) 106, 359
BsoBI CYCGRG 1 cut(s) 1010
Bsp1286I GDGCHC 2 cut(s) 253, 429
Bsp143I GATC 3 cut(s) 845, 1036, 1078
BspACI CCGC 3 cut(s) 246, 659, 1091
BspANI GGCC 2 cut(s) 446, 495
BspCNI CTCAG 5 cut(s) 28, 322, 379, 403, 643
BspDI ATCGAT 1 cut(s) 848
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 3 cut(s) 250, 445, 520
BspPI GGATC 1 cut(s) 1086
BspQI GCTCTTC 1 cut(s) 172
BspT107I GGYRCC 2 cut(s) 248, 518
BspTI CTTAAG 1 cut(s) 1082
BspTNI GGTCTC 2 cut(s) 106, 359
BsrDI GCAATG 1 cut(s) 411
BssECI CCNNGG 3 cut(s) 469, 1001, 1094
BssMI GATC 3 cut(s) 845, 1036, 1078
BssNI GRCGYC 1 cut(s) 519
BssT1I CCWWGG 2 cut(s) 1001, 1094
Bst2UI CCWGG 1 cut(s) 471
Bst4CI ACNGT 3 cut(s) 120, 397, 727
Bst6I CTCTTC 2 cut(s) 24, 172
BstACI GRCGYC 1 cut(s) 519
BstAFI CTTAAG 1 cut(s) 1082
BstBAI YACGTR 1 cut(s) 297
BstC8I GCNNGC 2 cut(s) 531, 1110
BstDEI CTNAG 7 cut(s) 15, 309, 387, 411, 651, 787, 842
BstF5I GGATG 2 cut(s) 1066, 1076
BstFNI CGCG 1 cut(s) 246
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 1 cut(s) 521
BstKTI GATC 3 cut(s) 848, 1039, 1081
BstMAI GTCTC 4 cut(s) 106, 359, 407, 921
BstMBI GATC 3 cut(s) 845, 1036, 1078
BstMWI GCNNNNNNNGC 4 cut(s) 188, 584, 1003, 1124
BstNI CCWGG 1 cut(s) 471
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 1 cut(s) 469
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 2 cut(s) 85, 1009
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 1 cut(s) 1078
BstXI CCANNNNNNTGG 1 cut(s) 780
BstYI RGATCY 1 cut(s) 1078
Bsu15I ATCGAT 1 cut(s) 848
Bsu36I CCTNAGG 1 cut(s) 309
BsuI GTATCC 2 cut(s) 263, 666
BsuRI GGCC 2 cut(s) 446, 495
BsuTUI ATCGAT 1 cut(s) 848
BtrI CACGTC 1 cut(s) 1018
BtsCI GGATG 2 cut(s) 1066, 1076
BtsI GCAGTG 1 cut(s) 887
BtsIMutI CAGTG 2 cut(s) 732, 887
Cac8I GCNNGC 2 cut(s) 531, 1110
CfoI GCGC 1 cut(s) 521
Cfr13I GGNCC 1 cut(s) 444
ClaI ATCGAT 1 cut(s) 848
Csp6I GTAC 1 cut(s) 1042
CviAII CATG 6 cut(s) 97, 337, 534, 825, 914, 1030
CviQI GTAC 1 cut(s) 1042
DdeI CTNAG 7 cut(s) 15, 309, 387, 411, 651, 787, 842
DinI GGCGCC 1 cut(s) 520
DpnI GATC 3 cut(s) 847, 1038, 1080
DpnII GATC 3 cut(s) 845, 1036, 1078
Eam1104I CTCTTC 2 cut(s) 24, 172
EarI CTCTTC 2 cut(s) 24, 172
EciI GGCGGA 1 cut(s) 1080
Eco130I CCWWGG 2 cut(s) 1001, 1094
Eco24I GRGCYC 1 cut(s) 429
Eco31I GGTCTC 2 cut(s) 106, 359
Eco32I GATATC 1 cut(s) 223
Eco81I CCTNAGG 1 cut(s) 309
Eco88I CYCGRG 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 444
EcoRII CCWGG 1 cut(s) 469
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 2 cut(s) 1001, 1094
EcoT22I ATGCAT 1 cut(s) 646
EcoT38I GRGCYC 1 cut(s) 429
EgeI GGCGCC 1 cut(s) 520
EheI GGCGCC 1 cut(s) 520
ErhI CCWWGG 2 cut(s) 1001, 1094
FaeI CATG 6 cut(s) 100, 340, 537, 828, 917, 1033
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 1 cut(s) 212
FatI CATG 6 cut(s) 96, 336, 533, 824, 913, 1029
FauNDI CATATG 1 cut(s) 130
Fnu4HI GCNGC 3 cut(s) 74, 998, 1125
FokI GGATG 2 cut(s) 1073, 1083
FriOI GRGCYC 1 cut(s) 429
Fsp4HI GCNGC 3 cut(s) 74, 998, 1125
FspBI CTAG 3 cut(s) 144, 422, 507
GlaI GCGC 1 cut(s) 520
GluI GCNGC 3 cut(s) 74, 998, 1125
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 2 cut(s) 446, 495
HhaI GCGC 1 cut(s) 521
Hin1I GRCGYC 1 cut(s) 519
Hin1II CATG 6 cut(s) 100, 340, 537, 828, 917, 1033
Hin6I GCGC 1 cut(s) 519
HinP1I GCGC 1 cut(s) 519
HindIII AAGCTT 1 cut(s) 1130
HinfI GANTC 4 cut(s) 48, 465, 985, 1008
HphI GGTGA 1 cut(s) 810
Hpy166II GTNNAC 1 cut(s) 294
Hpy188III TCNNGA 6 cut(s) 52, 218, 434, 462, 638, 715
Hpy8I GTNNAC 1 cut(s) 294
HpyAV CCTTC 5 cut(s) 100, 570, 805, 851, 916
HpyCH4III ACNGT 3 cut(s) 120, 397, 727
HpyCH4IV ACGT 2 cut(s) 296, 1017
HpyF10VI GCNNNNNNNGC 4 cut(s) 188, 584, 1003, 1124
HpyF3I CTNAG 7 cut(s) 15, 309, 387, 411, 651, 787, 842
HpySE526I ACGT 2 cut(s) 296, 1017
Hsp92I GRCGYC 1 cut(s) 519
Hsp92II CATG 6 cut(s) 100, 340, 537, 828, 917, 1033
HspAI GCGC 1 cut(s) 519
KasI GGCGCC 1 cut(s) 518
Kzo9I GATC 3 cut(s) 845, 1036, 1078
LguI GCTCTTC 1 cut(s) 172
LmnI GCTCC 2 cut(s) 347, 503
Lsp1109I GCAGC 2 cut(s) 85, 1009
LweI GCATC 2 cut(s) 14, 631
MaeI CTAG 3 cut(s) 144, 422, 507
MaeII ACGT 2 cut(s) 296, 1017
MaeIII GTNAC 2 cut(s) 760, 1018
MalI GATC 3 cut(s) 847, 1038, 1080
MboI GATC 3 cut(s) 845, 1036, 1078
MboII GAAGA 5 cut(s) 41, 146, 149, 189, 873
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 2 cut(s) 253, 429
MluCI AATT 3 cut(s) 318, 633, 735
Mly113I GGCGCC 1 cut(s) 519
MlyI GAGTC 2 cut(s) 459, 1002
MmeI TCCRAC 1 cut(s) 247
Mph1103I ATGCAT 1 cut(s) 646
MseI TTAA 4 cut(s) 60, 78, 831, 1083
MslI CAYNNNNRTG 1 cut(s) 823
MspCI CTTAAG 1 cut(s) 1082
MspR9I CCNGG 1 cut(s) 471
MvaI CCWGG 1 cut(s) 471
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 4 cut(s) 188, 584, 1003, 1124
NarI GGCGCC 1 cut(s) 519
NdeI CATATG 1 cut(s) 130
NdeII GATC 3 cut(s) 845, 1036, 1078
NlaIII CATG 6 cut(s) 100, 340, 537, 828, 917, 1033
NlaIV GGNNCC 3 cut(s) 250, 445, 520
NmuCI GTSAC 2 cut(s) 760, 1018
NsiI ATGCAT 1 cut(s) 646
NspI RCATGY 1 cut(s) 537
PaeR7I CTCGAG 1 cut(s) 1010
PciSI GCTCTTC 1 cut(s) 172
PcsI WCGNNNNNNNCGW 1 cut(s) 845
PfeI GAWTC 2 cut(s) 48, 985
PkrI GCNGC 3 cut(s) 75, 999, 1126
PleI GAGTC 2 cut(s) 459, 1002
PluTI GGCGCC 1 cut(s) 522
PpsI GAGTC 2 cut(s) 459, 1002
Ppu21I YACGTR 1 cut(s) 297
Psp6I CCWGG 1 cut(s) 469
PspGI CCWGG 1 cut(s) 469
PspN4I GGNNCC 3 cut(s) 250, 445, 520
PspPI GGNCC 1 cut(s) 444
PspXI VCTCGAGB 1 cut(s) 1010
PsuI RGATCY 1 cut(s) 1078
RsaI GTAC 1 cut(s) 1043
RsaNI GTAC 1 cut(s) 1042
RseI CAYNNNNRTG 1 cut(s) 823
SapI GCTCTTC 1 cut(s) 172
SaqAI TTAA 4 cut(s) 60, 78, 831, 1083
SatI GCNGC 3 cut(s) 74, 998, 1125
Sau3AI GATC 3 cut(s) 845, 1036, 1078
Sau96I GGNCC 1 cut(s) 444
ScaI AGTACT 1 cut(s) 1043
SchI GAGTC 2 cut(s) 459, 1002
ScrFI CCNGG 1 cut(s) 471
SduI GDGCHC 2 cut(s) 253, 429
SfaNI GCATC 2 cut(s) 14, 631
SfoI GGCGCC 1 cut(s) 520
Sfr274I CTCGAG 1 cut(s) 1010
SlaI CTCGAG 1 cut(s) 1010
SmiMI CAYNNNNRTG 1 cut(s) 823
SmlI CTYRAG 3 cut(s) 749, 1010, 1082
SmoI CTYRAG 3 cut(s) 749, 1010, 1082
Sse9I AATT 3 cut(s) 318, 633, 735
SsiI CCGC 3 cut(s) 246, 659, 1091
SspDI GGCGCC 1 cut(s) 518
SspMI CTAG 3 cut(s) 144, 422, 507
StyD4I CCNGG 1 cut(s) 469
StyI CCWWGG 2 cut(s) 1001, 1094
TaaI ACNGT 3 cut(s) 120, 397, 727
TaiI ACGT 2 cut(s) 299, 1020
TaqI TCGA 6 cut(s) 38, 370, 639, 716, 848, 1011
TasI AATT 3 cut(s) 318, 633, 735
TatI WGTACW 1 cut(s) 1041
TfiI GAWTC 2 cut(s) 48, 985
Tru1I TTAA 4 cut(s) 60, 78, 831, 1083
Tru9I TTAA 4 cut(s) 60, 78, 831, 1083
TscAI CASTG 2 cut(s) 732, 887
TseFI GTSAC 2 cut(s) 760, 1018
TseI GCWGC 3 cut(s) 73, 997, 1124
Tsp45I GTSAC 2 cut(s) 760, 1018
TspDTI ATGAA 2 cut(s) 147, 935
TspGWI ACGGA 2 cut(s) 881, 1037
TspRI CASTG 2 cut(s) 732, 887
Vha464I CTTAAG 1 cut(s) 1082
XapI RAATTY 1 cut(s) 735
XceI RCATGY 1 cut(s) 537
XcmI CCANNNNNNNNNTGG 1 cut(s) 802
XhoI CTCGAG 1 cut(s) 1010
XspI CTAG 3 cut(s) 144, 422, 507
ZrmI AGTACT 1 cut(s) 1043
Zsp2I ATGCAT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.