Rmu_sc0021527.1_g000001

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021527.1
Physical Location & Seq
Forward (+)
1 .. 972
972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021527.1_g000001.1.cds

Sequence Viewer

Length: 277 bp
agatggaaggcttcagggagttggtcaatgccttgttcgtgaatatagaatggtttctcatgttttgagaggagaagtcagcaaggatttcagagagggttgcagagctatattgttggacaaggataggaacccaaagtgggagccttctaaattggagctcatcaatgatcatatggttgagcagtacttctctaagttggatgatgaagaatgggaagagttaaagctccctgcaagattcaacttgcccgtaactgccattgcaaagctttga

Protein Analysis

91

Amino Acids

10.67

Weight (kDa)

5.7

Isoelectric Point (pI)

26.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 189
AfiI CCNNNNNNNGG 1 cut(s) 140
AgsI TTSAA 1 cut(s) 245
AluBI AGCT 4 cut(s) 108, 161, 230, 272
AluI AGCT 4 cut(s) 108, 161, 230, 272
Alw21I GWGCWC 1 cut(s) 163
Asp700I GAANNNNTTC 1 cut(s) 53
BanII GRGCYC 1 cut(s) 163
Bbv12I GWGCWC 1 cut(s) 163
BclI TGATCA 1 cut(s) 170
BmcAI AGTACT 1 cut(s) 189
BmiI GGNNCC 2 cut(s) 132, 145
Bsc4I CCNNNNNNNGG 1 cut(s) 140
Bse3DI GCAATG 1 cut(s) 262
BseGI GGATG 1 cut(s) 209
BseLI CCNNNNNNNGG 1 cut(s) 140
BseMI GCAATG 1 cut(s) 262
BseRI GAGGAG 1 cut(s) 85
BsiHKAI GWGCWC 1 cut(s) 163
BslI CCNNNNNNNGG 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 163
Bsp143I GATC 1 cut(s) 170
BspLI GGNNCC 2 cut(s) 132, 145
BsrDI GCAATG 1 cut(s) 262
BssMI GATC 1 cut(s) 170
Bst6I CTCTTC 1 cut(s) 214
BstDEI CTNAG 1 cut(s) 196
BstF5I GGATG 1 cut(s) 209
BstKTI GATC 1 cut(s) 173
BstMBI GATC 1 cut(s) 170
BtsCI GGATG 1 cut(s) 209
Csp6I GTAC 1 cut(s) 188
CviAII CATG 1 cut(s) 60
CviJI RGCY 6 cut(s) 11, 108, 146, 161, 230, 272
CviKI_1 RGCY 6 cut(s) 11, 108, 146, 161, 230, 272
CviQI GTAC 1 cut(s) 188
DdeI CTNAG 1 cut(s) 196
DpnI GATC 1 cut(s) 172
DpnII GATC 1 cut(s) 170
Eam1104I CTCTTC 1 cut(s) 214
EarI CTCTTC 1 cut(s) 214
Ecl136II GAGCTC 1 cut(s) 161
Eco24I GRGCYC 1 cut(s) 163
Eco53kI GAGCTC 1 cut(s) 161
EcoICRI GAGCTC 1 cut(s) 161
EcoT38I GRGCYC 1 cut(s) 163
FaeI CATG 1 cut(s) 63
FaiI YATR 5 cut(s) 46, 61, 111, 175, 177
FatI CATG 1 cut(s) 59
FauNDI CATATG 1 cut(s) 175
FbaI TGATCA 1 cut(s) 170
FokI GGATG 1 cut(s) 216
FriOI GRGCYC 1 cut(s) 163
Hin1II CATG 1 cut(s) 63
HindIII AAGCTT 1 cut(s) 270
HinfI GANTC 1 cut(s) 241
Hpy188I TCNGA 1 cut(s) 93
Hpy188III TCNNGA 1 cut(s) 39
HpyAV CCTTC 1 cut(s) 157
HpyCH4V TGCA 3 cut(s) 103, 237, 267
HpyF3I CTNAG 1 cut(s) 196
Hsp92II CATG 1 cut(s) 63
Ksp22I TGATCA 1 cut(s) 170
Kzo9I GATC 1 cut(s) 170
LmnI GCTCC 3 cut(s) 143, 158, 235
LpnPI CCDG 1 cut(s) 247
MaeIII GTNAC 1 cut(s) 254
MalI GATC 1 cut(s) 172
MboI GATC 1 cut(s) 170
MboII GAAGA 2 cut(s) 222, 231
MhlI GDGCHC 1 cut(s) 163
MluCI AATT 1 cut(s) 153
MmeI TCCRAC 2 cut(s) 97, 181
MnlI CCTC 2 cut(s) 63, 89
MroXI GAANNNNTTC 1 cut(s) 53
MseI TTAA 1 cut(s) 225
NdeI CATATG 1 cut(s) 175
NdeII GATC 1 cut(s) 170
NlaIII CATG 1 cut(s) 63
NlaIV GGNNCC 2 cut(s) 132, 145
PdmI GAANNNNTTC 1 cut(s) 53
PfeI GAWTC 1 cut(s) 241
Psp124BI GAGCTC 1 cut(s) 163
PspN4I GGNNCC 2 cut(s) 132, 145
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
SacI GAGCTC 1 cut(s) 163
SaqAI TTAA 1 cut(s) 225
Sau3AI GATC 1 cut(s) 170
ScaI AGTACT 1 cut(s) 189
SduI GDGCHC 1 cut(s) 163
SetI ASST 4 cut(s) 110, 163, 232, 274
Sse9I AATT 1 cut(s) 153
SstI GAGCTC 1 cut(s) 163
TasI AATT 1 cut(s) 153
TatI WGTACW 1 cut(s) 187
TfiI GAWTC 1 cut(s) 241
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TspDTI ATGAA 1 cut(s) 223
XmnI GAANNNNTTC 1 cut(s) 53
ZrmI AGTACT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.