pycom02g19850

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
17907549 .. 17913774
6226 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g19850.6

Sequence Viewer

Length: 1155 bp
ATGGCTTCTTCCACCTCTACTCCGCGCGAAGAAGATTCGGTTTTGGTACAGAAGAATTTGTTTGTTAGGACATTGACATTGAACCGGCCTCGGCAACTGAATGCCCTTAACTTTGATATGATTTCTCGTCTGTTGGAACATTTCCTTGCCTATGAGGATGATGCTAATGTCAAGTTGGTAATTGTCAAGGGGAAAGGAAGAGCTTTTTGTGCTGGTGGAGATGTAGCGGCTGTAGTTCGTCAGATTAATGAAGGAAATTGGAGATTAGCTGCTCATTTTTTTCAGAAGGAGTTTACCTTGAATTATTTGCTGGCAACGTACAGTAAACCCCAGGTTTCAATTCTGGACGGAATTGTTATGGGAGGTGGGGCTGGTGCTTCAATACATGGAATATTTCGTGTTGCAACTGAGAATTCGGTTTTTGCAATGCCCGAAACTGCTTTGGGACTTTTTCCGGATGTAGGTGCCTCTTATTACTTGTCCAGACTTACTGGATTCTTTGGAGAATATGTTGGTCTTACAGGTACCAGATTGGATGGTGCTGAAATGCTTGCTTGTGGTCTTGCTACACATTTTGTTCCATCAACAAGATTGTCTTTGTTAGAAGAAGCTTTAAACAAAGTTGATTCAAGTGATTTTGCCAATATTCAAGCAATTATAGATAAATACTCGCAGAGTCCAGCTCTGAAAAAGAAAAGTGCTTATTTCCGGATGGACGTTATAGACAAGTGCTTTTCTAGAAGAACTGTAGAAGAAATTTTATCTGCCCTTGAGGATGAGGAGGCTAAAAACAGGGCGGATGATTGGTTAACTTCAACAGTTCAAGCGCTAAAGAAGGCATCACCAATGAGTTTGAAGATTTCTTTGAGATCAATTAGAGAAGGAAGGCTTCAGGGAGTTGGTCAGTGCCTTGTTTGTGAATATAGAATGGTTTCGCATGTGGTGAAAGGAGAAGTCAGCAAGGACTTCAGAGAGGGTTGCAGAGCTTTATTGTTGGACAAGGACAAGAACCCAAAGTGGGAGCCTTCTAAATTGGAGCTCGTCACTGACCATATGGTCGAGCGGTACTTCTCTAAGTTGGACGATGAAGGATGGGAAGATTTAAAGCTCCCTGCAAGATCAAACTTGCCTGTAACTGCCATTGCCAAGCTTTAA

Protein Analysis

385

Amino Acids

42.72

Weight (kDa)

7.01

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1055
Acc65I GGTACC 1 cut(s) 524
AccB1I GGYRCC 2 cut(s) 464, 524
AccBSI CCGCTC 1 cut(s) 1063
AccII CGCG 2 cut(s) 25, 27
AccIII TCCGGA 2 cut(s) 454, 708
AciI CCGC 4 cut(s) 23, 227, 797, 1063
AcsI RAATTY 3 cut(s) 55, 412, 756
AcuI CTGAAG 2 cut(s) 875, 952
AfaI GTAC 4 cut(s) 48, 320, 526, 1067
AfeI AGCGCT 1 cut(s) 828
AfiI CCNNNNNNNGG 2 cut(s) 461, 1018
AgsI TTSAA 9 cut(s) 82, 301, 339, 381, 630, 650, 816, 824, 856
AjnI CCWGG 1 cut(s) 330
AluBI AGCT 8 cut(s) 203, 269, 611, 683, 986, 1039, 1108, 1150
AluI AGCT 8 cut(s) 203, 269, 611, 683, 986, 1039, 1108, 1150
Alw21I GWGCWC 1 cut(s) 1041
Aor13HI TCCGGA 2 cut(s) 454, 708
Aor51HI AGCGCT 1 cut(s) 828
AoxI GGCC 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 269
ApoI RAATTY 3 cut(s) 55, 412, 756
AseI ATTAAT 1 cut(s) 246
Asp700I GAANNNNTTC 1 cut(s) 931
Asp718I GGTACC 1 cut(s) 524
AspLEI GCGC 2 cut(s) 27, 829
AsuHPI GGTGA 2 cut(s) 834, 955
BanI GGYRCC 2 cut(s) 464, 524
BanII GRGCYC 1 cut(s) 1041
Bbv12I GWGCWC 1 cut(s) 1041
BbvI GCAGC 1 cut(s) 256
BccI CCATC 4 cut(s) 530, 589, 706, 1086
BciT130I CCWGG 1 cut(s) 332
BfaI CTAG 1 cut(s) 738
BfmI CTRYAG 2 cut(s) 231, 747
BfoI RGCGCY 1 cut(s) 830
BisI GCNGC 2 cut(s) 228, 270
BlsI GCNGC 2 cut(s) 229, 271
Bme1390I CCNGG 1 cut(s) 332
BmiI GGNNCC 3 cut(s) 466, 526, 1023
BmrFI CCNGG 1 cut(s) 332
BmsI GCATC 2 cut(s) 151, 848
BplI GAGNNNNNCTC 2 cut(s) 667, 699
BpuEI CTTGAG 1 cut(s) 791
BsaJI CCNNGG 2 cut(s) 89, 330
BsaWI WCCGGW 2 cut(s) 454, 708
BsaXI ACNNNNNCTCC 3 cut(s) 34, 495, 525
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 1018
Bse118I RCCGGY 1 cut(s) 84
Bse1I ACTGG 1 cut(s) 496
Bse3DI GCAATG 2 cut(s) 432, 1140
BseAI TCCGGA 2 cut(s) 454, 708
BseBI CCWGG 1 cut(s) 332
BseDI CCNNGG 2 cut(s) 89, 330
BseGI GGATG 7 cut(s) 163, 463, 541, 717, 781, 805, 1097
BseLI CCNNNNNNNGG 2 cut(s) 461, 1018
BseMI GCAATG 2 cut(s) 432, 1140
BseMII CTCAG 1 cut(s) 399
BseNI ACTGG 1 cut(s) 496
BseRI GAGGAG 1 cut(s) 794
BseXI GCAGC 1 cut(s) 256
Bsh1236I CGCG 2 cut(s) 25, 27
BshFI GGCC 1 cut(s) 88
BshNI GGYRCC 2 cut(s) 464, 524
BsiHKAI GWGCWC 1 cut(s) 1041
BsiSI CCGG 3 cut(s) 85, 455, 709
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 2 cut(s) 461, 1018
BsmFI GGGAC 1 cut(s) 459
BsmI GAATGC 1 cut(s) 106
BsnI GGCC 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 1041
Bsp13I TCCGGA 2 cut(s) 454, 708
Bsp143I GATC 2 cut(s) 869, 1118
BspACI CCGC 4 cut(s) 23, 227, 797, 1063
BspANI GGCC 1 cut(s) 88
BspCNI CTCAG 1 cut(s) 400
BspEI TCCGGA 2 cut(s) 454, 708
BspFNI CGCG 2 cut(s) 25, 27
BspLI GGNNCC 3 cut(s) 466, 526, 1023
BspQI GCTCTTC 1 cut(s) 193
BspT107I GGYRCC 2 cut(s) 464, 524
BsrBI CCGCTC 1 cut(s) 1063
BsrDI GCAATG 2 cut(s) 432, 1140
BsrFI RCCGGY 1 cut(s) 84
BsrI ACTGG 1 cut(s) 496
BssAI RCCGGY 1 cut(s) 84
BssECI CCNNGG 2 cut(s) 89, 330
BssMI GATC 2 cut(s) 869, 1118
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 3 cut(s) 323, 748, 820
Bst6I CTCTTC 1 cut(s) 193
BstC8I GCNNGC 2 cut(s) 312, 552
BstDEI CTNAG 2 cut(s) 408, 1074
BstF5I GGATG 7 cut(s) 163, 463, 541, 717, 781, 805, 1097
BstFNI CGCG 2 cut(s) 25, 27
BstH2I RGCGCY 1 cut(s) 830
BstHHI GCGC 2 cut(s) 27, 829
BstKTI GATC 2 cut(s) 872, 1121
BstMBI GATC 2 cut(s) 869, 1118
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstNI CCWGG 1 cut(s) 332
BstNSI RCATGY 1 cut(s) 941
BstSCI CCNGG 1 cut(s) 330
BstSFI CTRYAG 2 cut(s) 231, 747
BstUI CGCG 2 cut(s) 25, 27
BstV1I GCAGC 1 cut(s) 256
BsuRI GGCC 1 cut(s) 88
BtsCI GGATG 7 cut(s) 163, 463, 541, 717, 781, 805, 1097
BtsIMutI CAGTG 2 cut(s) 911, 1044
Cac8I GCNNGC 2 cut(s) 312, 552
CfoI GCGC 2 cut(s) 27, 829
Cfr10I RCCGGY 1 cut(s) 84
Csp6I GTAC 4 cut(s) 47, 319, 525, 1066
CviAII CATG 2 cut(s) 386, 938
CviQI GTAC 4 cut(s) 47, 319, 525, 1066
DdeI CTNAG 2 cut(s) 408, 1074
DpnI GATC 2 cut(s) 871, 1120
DpnII GATC 2 cut(s) 869, 1118
DraI TTTAAA 2 cut(s) 615, 1104
DrdI GACNNNNNNGTC 1 cut(s) 1055
DseDI GACNNNNNNGTC 1 cut(s) 1055
Eam1104I CTCTTC 1 cut(s) 193
EarI CTCTTC 1 cut(s) 193
EciI GGCGGA 1 cut(s) 812
Ecl136II GAGCTC 1 cut(s) 1039
Eco24I GRGCYC 1 cut(s) 1041
Eco47III AGCGCT 1 cut(s) 828
Eco53kI GAGCTC 1 cut(s) 1039
Eco57I CTGAAG 2 cut(s) 875, 952
EcoICRI GAGCTC 1 cut(s) 1039
EcoRI GAATTC 1 cut(s) 412
EcoRII CCWGG 1 cut(s) 330
EcoT38I GRGCYC 1 cut(s) 1041
FaeI CATG 2 cut(s) 389, 941
FalI AAGNNNNNCTT 4 cut(s) 580, 612, 873, 905
FaqI GGGAC 1 cut(s) 459
FatI CATG 2 cut(s) 385, 937
FauNDI CATATG 1 cut(s) 1053
Fnu4HI GCNGC 2 cut(s) 228, 270
FokI GGATG 7 cut(s) 170, 470, 548, 724, 788, 812, 1104
FriOI GRGCYC 1 cut(s) 1041
Fsp4HI GCNGC 2 cut(s) 228, 270
FspBI CTAG 1 cut(s) 738
GlaI GCGC 2 cut(s) 26, 828
GluI GCNGC 2 cut(s) 228, 270
HaeII RGCGCY 1 cut(s) 830
HaeIII GGCC 1 cut(s) 88
HapII CCGG 3 cut(s) 85, 455, 709
HhaI GCGC 2 cut(s) 27, 829
Hin1II CATG 2 cut(s) 389, 941
Hin6I GCGC 2 cut(s) 25, 827
HinP1I GCGC 2 cut(s) 25, 827
HincII GTYRAC 1 cut(s) 810
HindII GTYRAC 1 cut(s) 810
HindIII AAGCTT 2 cut(s) 609, 1148
HinfI GANTC 4 cut(s) 35, 495, 626, 676
HpaI GTTAAC 1 cut(s) 810
HpaII CCGG 3 cut(s) 85, 455, 709
HphI GGTGA 2 cut(s) 834, 955
Hpy166II GTNNAC 3 cut(s) 294, 326, 810
Hpy188I TCNGA 4 cut(s) 243, 285, 687, 971
Hpy188III TCNNGA 5 cut(s) 344, 455, 483, 709, 738
Hpy8I GTNNAC 3 cut(s) 294, 326, 810
HpyAV CCTTC 7 cut(s) 245, 280, 829, 875, 879, 1035, 1082
HpyCH4III ACNGT 3 cut(s) 323, 748, 820
HpyCH4IV ACGT 2 cut(s) 317, 717
HpyCH4V TGCA 4 cut(s) 404, 425, 981, 1115
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 2 cut(s) 408, 1074
HpySE526I ACGT 2 cut(s) 317, 717
Hsp92II CATG 2 cut(s) 389, 941
HspAI GCGC 2 cut(s) 25, 827
Kpn2I TCCGGA 2 cut(s) 454, 708
KpnI GGTACC 1 cut(s) 528
KspAI GTTAAC 1 cut(s) 810
Kzo9I GATC 2 cut(s) 869, 1118
LguI GCTCTTC 1 cut(s) 193
LmnI GCTCC 3 cut(s) 1021, 1036, 1113
Lsp1109I GCAGC 1 cut(s) 256
LweI GCATC 2 cut(s) 151, 848
MaeI CTAG 1 cut(s) 738
MaeII ACGT 2 cut(s) 317, 717
MaeIII GTNAC 2 cut(s) 1042, 1132
MalI GATC 2 cut(s) 871, 1120
MbiI CCGCTC 1 cut(s) 1063
MboI GATC 2 cut(s) 869, 1118
MboII GAAGA 9 cut(s) 41, 44, 64, 210, 617, 753, 764, 868, 1109
MhlI GDGCHC 1 cut(s) 1041
MlyI GAGTC 1 cut(s) 685
MmeI TCCRAC 3 cut(s) 114, 975, 1059
MnlI CCTC 9 cut(s) 25, 99, 148, 356, 478, 766, 772, 775, 967
MroI TCCGGA 2 cut(s) 454, 708
MroXI GAANNNNTTC 1 cut(s) 931
MseI TTAA 6 cut(s) 108, 246, 614, 809, 1103, 1153
MspI CCGG 3 cut(s) 85, 455, 709
MspR9I CCNGG 1 cut(s) 332
Mva1269I GAATGC 1 cut(s) 106
MvaI CCWGG 1 cut(s) 332
MvnI CGCG 2 cut(s) 25, 27
MwoI GCNNNNNNNGC 1 cut(s) 209
NdeI CATATG 1 cut(s) 1053
NdeII GATC 2 cut(s) 869, 1118
NlaIII CATG 2 cut(s) 389, 941
NlaIV GGNNCC 3 cut(s) 466, 526, 1023
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 1 cut(s) 1042
NspI RCATGY 1 cut(s) 941
PciSI GCTCTTC 1 cut(s) 193
PctI GAATGC 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 931
PfeI GAWTC 3 cut(s) 35, 495, 626
PkrI GCNGC 2 cut(s) 229, 271
PleI GAGTC 1 cut(s) 684
PpsI GAGTC 1 cut(s) 684
PshBI ATTAAT 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 1041
Psp6I CCWGG 1 cut(s) 330
PspGI CCWGG 1 cut(s) 330
PspN4I GGNNCC 3 cut(s) 466, 526, 1023
RsaI GTAC 4 cut(s) 48, 320, 526, 1067
RsaNI GTAC 4 cut(s) 47, 319, 525, 1066
SacI GAGCTC 1 cut(s) 1041
SapI GCTCTTC 1 cut(s) 193
SaqAI TTAA 6 cut(s) 108, 246, 614, 809, 1103, 1153
SatI GCNGC 2 cut(s) 228, 270
Sau3AI GATC 2 cut(s) 869, 1118
SchI GAGTC 1 cut(s) 685
ScrFI CCNGG 1 cut(s) 332
SduI GDGCHC 1 cut(s) 1041
SfaNI GCATC 2 cut(s) 151, 848
SfcI CTRYAG 2 cut(s) 231, 747
SmlI CTYRAG 1 cut(s) 770
SmoI CTYRAG 1 cut(s) 770
SsiI CCGC 4 cut(s) 23, 227, 797, 1063
SspI AATATT 2 cut(s) 393, 646
SspMI CTAG 1 cut(s) 738
SstI GAGCTC 1 cut(s) 1041
StyD4I CCNGG 1 cut(s) 330
TaaI ACNGT 3 cut(s) 323, 748, 820
TaiI ACGT 2 cut(s) 320, 720
TaqI TCGA 1 cut(s) 1059
TauI GCSGC 1 cut(s) 230
TfiI GAWTC 3 cut(s) 35, 495, 626
Tru1I TTAA 6 cut(s) 108, 246, 614, 809, 1103, 1153
Tru9I TTAA 6 cut(s) 108, 246, 614, 809, 1103, 1153
TscAI CASTG 2 cut(s) 911, 1051
TseFI GTSAC 1 cut(s) 1042
TseI GCWGC 1 cut(s) 269
Tsp45I GTSAC 1 cut(s) 1042
TspDTI ATGAA 2 cut(s) 264, 1101
TspGWI ACGGA 1 cut(s) 363
TspRI CASTG 2 cut(s) 911, 1051
VspI ATTAAT 1 cut(s) 246
XapI RAATTY 3 cut(s) 55, 412, 756
XbaI TCTAGA 1 cut(s) 737
XceI RCATGY 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 931
XspI CTAG 1 cut(s) 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.