FvH4_7g09160

3-hydroxyisobutyryl-CoA hydrolase 1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
8903798 .. 8905015
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09160.t1

Sequence Viewer

Length: 1218 bp
ATGGCTTCTTTGATGAGTTCTTTCAGCTCTGATGATCTATGCCATCCTGAGGTTTTGATACAAGAGAATAATCCATTTGTGAGGACACTGACACTAAACAGGCCTCGACAACTCAACGCTCTTTCACTTGAAATGCTTTCTCGGCTGTCTGAGCTCTTCCTTGCCCTAGAGCATGATGCCAAAGTCAAGTTGGTCATTCTCAAAGGTAATGGAAAAGCATTTTGCGCCGGCGGTGATGCGGTTGTTTTAGCTCGTCATCTCTATAATGGCGACTGGAGATTTGGTACCAAAACAACTGAGGAGTCATACAAATTACTATACTTAATAGCAACATACAGTAAGCCCCAAGTTTCAGTTCTTGATGGAGTTTGCTTGGGACGTGGCGCTGCAATTAGTATATCCTGTAGATTTCGTATCGCAACCGAGAATTCCATTTTCTCTGTCCCAGAAGTAGCTTTGGGAGGGTTTCCTGATGTGGGTGCCTCTTACTTCTTGTCAAGGCTTCCTGGATTCTTTGGAGAATATGTTGCCCTAACTGGTGCCCAATTGGATGGTCCTGAAATGCTTGCTTGTGGTCTAGCAACTCACTTTGTTCCCTCAACCAAATTGGCTTTGTTAGAAGAAGCTCTAGCATCCAAAGTTGCTTCTTCAACCAATAACATCTCCAGCCAAGATCTTCCATTTTATATTTCAGCTATTATAAATGACTACTCGATCCGACCAGCCGTGAATAGGAAAGGCAGTGCTATTCACAAAATGGATGTTATTCAAAAGTGTTTTTCAAAGGGAAGTGTCGAAGAGATTTTGAGTGCACTTGAGAAGGAGGCTGCTGATAAGAACCTTCAAGATCCTATAAATGGTGATGTTTGGTTATCTTCCACAATTCAGTCACTTCAGAAGGCATCACCAACAAGTTTGAAGCTTTGTTTGCGATCGATTAGAGAAGGAAGGTGTCAAGGTCTTGGTGAGTGTCTTGCTCGAGAGTATAGAATGGCTTATCATGCTATCCGAGGAAAAATCAGCTCGGACTTCAGAAATGGTTGCACAAGTGTTTTTTTGAAGAAGGATAAAATTCAAAAGTGGGAACCTTGTAAACTGGAGCTCATCACTGACCAGATGGTTGATCAGTACTTCTCAAAGTTAGGTGATGACGAAAATTTGGAAGAACTAAAGCTCCTCGCAAAATCAAACTTGCTTGCCATTGCCAGCAAGCTTTAA

Protein Analysis

406

Amino Acids

44.52

Weight (kDa)

7.49

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 27 - 378 4.8e-105 Enoyl-CoA hydratase/isomerase
ECH_1 PF00378 27 - 221 7.3e-31 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 701
Acc65I GGTACC 1 cut(s) 284
AccB1I GGYRCC 3 cut(s) 284, 479, 539
AciI CCGC 2 cut(s) 231, 239
AclWI GGATC 2 cut(s) 709, 842
AcsI RAATTY 3 cut(s) 427, 1071, 1156
AcuI CTGAAG 2 cut(s) 878, 1015
AfaI GTAC 2 cut(s) 286, 1130
AfiI CCNNNNNNNGG 4 cut(s) 49, 476, 732, 857
AgsI TTSAA 8 cut(s) 131, 651, 770, 783, 845, 919, 1060, 1076
AjiI CACGTC 1 cut(s) 380
AjnI CCWGG 1 cut(s) 505
AjuI GAANNNNNNNTTGG 2 cut(s) 339, 371
AloI GAACNNNNNNTCC 2 cut(s) 1158, 1190
Alw21I GWGCWC 3 cut(s) 156, 814, 1104
Alw44I GTGCAC 1 cut(s) 810
AlwI GGATC 2 cut(s) 709, 842
Ama87I CYCGRG 1 cut(s) 978
AoxI GGCC 1 cut(s) 101
ApaLI GTGCAC 1 cut(s) 810
ApeKI GCWGC 2 cut(s) 386, 827
ApoI RAATTY 3 cut(s) 427, 1071, 1156
ArsI GACNNNNNNTTYG 2 cut(s) 263, 295
Asp718I GGTACC 1 cut(s) 284
AspLEI GCGC 2 cut(s) 227, 386
AspS9I GGNCC 1 cut(s) 554
AsuHPI GGTGA 5 cut(s) 245, 872, 897, 977, 1157
AvaI CYCGRG 1 cut(s) 978
AvaII GGWCC 1 cut(s) 554
AxyI CCTNAGG 1 cut(s) 48
BaeGI GKGCMC 2 cut(s) 544, 814
BanI GGYRCC 3 cut(s) 284, 479, 539
BanII GRGCYC 2 cut(s) 156, 1104
Bbv12I GWGCWC 3 cut(s) 156, 814, 1104
BbvI GCAGC 2 cut(s) 373, 814
BccI CCATC 4 cut(s) 51, 356, 545, 1111
BceAI ACGGC 1 cut(s) 710
BciT130I CCWGG 1 cut(s) 507
BclI TGATCA 1 cut(s) 1123
BfaI CTAG 3 cut(s) 167, 578, 629
BfmI CTRYAG 1 cut(s) 403
BfoI RGCGCY 1 cut(s) 387
BglII AGATCT 1 cut(s) 673
BisI GCNGC 2 cut(s) 387, 828
BlsI GCNGC 2 cut(s) 388, 829
BmcAI AGTACT 1 cut(s) 1130
Bme1390I CCNGG 1 cut(s) 507
Bme18I GGWCC 1 cut(s) 554
BmeT110I CYCGRG 1 cut(s) 978
BmgBI CACGTC 1 cut(s) 380
BmgT120I GGNCC 1 cut(s) 554
BmiI GGNNCC 4 cut(s) 286, 481, 541, 1086
BmrFI CCNGG 1 cut(s) 507
BmsI GCATC 4 cut(s) 166, 226, 641, 911
BpmI CTGGAG 3 cut(s) 295, 649, 1118
BpuEI CTTGAG 1 cut(s) 836
Bsa29I ATCGAT 1 cut(s) 935
BsaJI CCNNGG 1 cut(s) 1009
BsaXI ACNNNNNCTCC 6 cut(s) 268, 298, 510, 540, 1158, 1188
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 476, 732, 857
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 3 cut(s) 278, 541, 1101
Bse21I CCTNAGG 1 cut(s) 48
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 1 cut(s) 507
BseCI ATCGAT 1 cut(s) 935
BseDI CCNNGG 1 cut(s) 1009
BseGI GGATG 4 cut(s) 43, 556, 632, 766
BseLI CCNNNNNNNGG 4 cut(s) 49, 476, 732, 857
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 3 cut(s) 39, 141, 288
BseNI ACTGG 3 cut(s) 278, 541, 1101
BseRI GAGGAG 2 cut(s) 314, 1166
BseSI GKGCMC 2 cut(s) 544, 814
BseXI GCAGC 2 cut(s) 373, 814
Bsh1285I CGRYCG 1 cut(s) 935
BshFI GGCC 1 cut(s) 103
BshNI GGYRCC 3 cut(s) 284, 479, 539
BshVI ATCGAT 1 cut(s) 935
BsiEI CGRYCG 1 cut(s) 935
BsiHKAI GWGCWC 3 cut(s) 156, 814, 1104
BsiHKCI CYCGRG 1 cut(s) 978
BsiSI CCGG 1 cut(s) 228
BslFI GGGAC 2 cut(s) 390, 428
BslI CCNNNNNNNGG 4 cut(s) 49, 476, 732, 857
BsmFI GGGAC 2 cut(s) 390, 428
BsnI GGCC 1 cut(s) 103
BsoBI CYCGRG 1 cut(s) 978
Bsp1286I GDGCHC 4 cut(s) 156, 544, 814, 1104
Bsp143I GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
BspACI CCGC 2 cut(s) 231, 239
BspANI GGCC 1 cut(s) 103
BspCNI CTCAG 3 cut(s) 40, 142, 289
BspDI ATCGAT 1 cut(s) 935
BspLI GGNNCC 4 cut(s) 286, 481, 541, 1086
BspPI GGATC 2 cut(s) 709, 842
BspQI GCTCTTC 1 cut(s) 161
BspT107I GGYRCC 3 cut(s) 284, 479, 539
BsrDI GCAATG 1 cut(s) 1200
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 3 cut(s) 278, 541, 1101
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 1 cut(s) 1009
BssMI GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
Bst2UI CCWGG 1 cut(s) 507
Bst4CI ACNGT 1 cut(s) 338
Bst6I CTCTTC 2 cut(s) 161, 792
BstC8I GCNNGC 5 cut(s) 229, 567, 1197, 1207, 1211
BstDEI CTNAG 3 cut(s) 48, 150, 297
BstF5I GGATG 4 cut(s) 43, 556, 632, 766
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 2 cut(s) 227, 386
BstKTI GATC 6 cut(s) 37, 676, 717, 850, 935, 1126
BstMBI GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
BstMCI CGRYCG 1 cut(s) 935
BstMWI GCNNNNNNNGC 5 cut(s) 142, 151, 224, 928, 1001
BstNI CCWGG 1 cut(s) 507
BstSCI CCNGG 1 cut(s) 505
BstSFI CTRYAG 1 cut(s) 403
BstSLI GKGCMC 2 cut(s) 544, 814
BstV1I GCAGC 2 cut(s) 373, 814
BstX2I RGATCY 2 cut(s) 673, 847
BstXI CCANNNNNNTGG 1 cut(s) 551
BstYI RGATCY 2 cut(s) 673, 847
Bsu15I ATCGAT 1 cut(s) 935
Bsu36I CCTNAGG 1 cut(s) 48
BsuRI GGCC 1 cut(s) 103
BsuTUI ATCGAT 1 cut(s) 935
BtrI CACGTC 1 cut(s) 380
BtsCI GGATG 4 cut(s) 43, 556, 632, 766
BtsI GCAGTG 1 cut(s) 748
BtsIMutI CAGTG 3 cut(s) 86, 748, 1107
Cac8I GCNNGC 5 cut(s) 229, 567, 1197, 1207, 1211
CfoI GCGC 2 cut(s) 227, 386
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 1 cut(s) 554
ClaI ATCGAT 1 cut(s) 935
Csp6I GTAC 2 cut(s) 285, 1129
CviAII CATG 2 cut(s) 173, 1001
CviQI GTAC 2 cut(s) 285, 1129
DdeI CTNAG 3 cut(s) 48, 150, 297
DpnI GATC 6 cut(s) 36, 675, 716, 849, 934, 1125
DpnII GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
Eam1104I CTCTTC 2 cut(s) 161, 792
EarI CTCTTC 2 cut(s) 161, 792
Ecl136II GAGCTC 2 cut(s) 154, 1102
Eco147I AGGCCT 1 cut(s) 103
Eco24I GRGCYC 2 cut(s) 156, 1104
Eco47I GGWCC 1 cut(s) 554
Eco53kI GAGCTC 2 cut(s) 154, 1102
Eco57I CTGAAG 2 cut(s) 878, 1015
Eco81I CCTNAGG 1 cut(s) 48
Eco88I CYCGRG 1 cut(s) 978
EcoICRI GAGCTC 2 cut(s) 154, 1102
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 1 cut(s) 505
EcoT38I GRGCYC 2 cut(s) 156, 1104
FaeI CATG 2 cut(s) 176, 1004
FaqI GGGAC 2 cut(s) 390, 428
FatI CATG 2 cut(s) 172, 1000
FbaI TGATCA 1 cut(s) 1123
Fnu4HI GCNGC 2 cut(s) 387, 828
FokI GGATG 4 cut(s) 30, 563, 619, 773
FriOI GRGCYC 2 cut(s) 156, 1104
Fsp4HI GCNGC 2 cut(s) 387, 828
FspBI CTAG 3 cut(s) 167, 578, 629
GlaI GCGC 2 cut(s) 226, 385
GluI GCNGC 2 cut(s) 387, 828
GsuI CTGGAG 3 cut(s) 295, 649, 1118
HaeII RGCGCY 1 cut(s) 387
HaeIII GGCC 1 cut(s) 103
HapII CCGG 1 cut(s) 228
HhaI GCGC 2 cut(s) 227, 386
Hin1II CATG 2 cut(s) 176, 1004
Hin6I GCGC 2 cut(s) 225, 384
HinP1I GCGC 2 cut(s) 225, 384
HindIII AAGCTT 2 cut(s) 920, 1211
HinfI GANTC 2 cut(s) 302, 510
HpaII CCGG 1 cut(s) 228
HphI GGTGA 5 cut(s) 245, 872, 897, 977, 1157
Hpy166II GTNNAC 2 cut(s) 812, 1094
Hpy188I TCNGA 7 cut(s) 31, 151, 719, 897, 1010, 1027, 1034
Hpy188III TCNNGA 6 cut(s) 47, 359, 470, 557, 845, 980
Hpy8I GTNNAC 2 cut(s) 812, 1094
HpyAV CCTTC 6 cut(s) 814, 851, 892, 938, 942, 1057
HpyCH4III ACNGT 1 cut(s) 338
HpyCH4IV ACGT 1 cut(s) 379
HpyCH4V TGCA 3 cut(s) 389, 812, 1044
HpyF10VI GCNNNNNNNGC 5 cut(s) 142, 151, 224, 928, 1001
HpyF3I CTNAG 3 cut(s) 48, 150, 297
HpySE526I ACGT 1 cut(s) 379
Hsp92II CATG 2 cut(s) 176, 1004
HspAI GCGC 2 cut(s) 225, 384
KpnI GGTACC 1 cut(s) 288
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 1123
Kzo9I GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
LguI GCTCTTC 1 cut(s) 161
LmnI GCTCC 2 cut(s) 1099, 1179
Lsp1109I GCAGC 2 cut(s) 373, 814
LweI GCATC 4 cut(s) 166, 226, 641, 911
MaeI CTAG 3 cut(s) 167, 578, 629
MaeII ACGT 1 cut(s) 379
MaeIII GTNAC 1 cut(s) 888
MalI GATC 6 cut(s) 36, 675, 716, 849, 934, 1125
MboI GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
MboII GAAGA 8 cut(s) 148, 632, 639, 668, 809, 867, 1072, 1175
MfeI CAATTG 1 cut(s) 545
MflI RGATCY 2 cut(s) 673, 847
MhlI GDGCHC 4 cut(s) 156, 544, 814, 1104
MluCI AATT 8 cut(s) 311, 390, 427, 545, 605, 882, 1071, 1156
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 1 cut(s) 742
MreI CGCCGGCG 1 cut(s) 227
MroNI GCCGGC 1 cut(s) 227
MseI TTAA 2 cut(s) 323, 1216
MspI CCGG 1 cut(s) 228
MspR9I CCNGG 1 cut(s) 507
MunI CAATTG 1 cut(s) 545
MvaI CCWGG 1 cut(s) 507
MwoI GCNNNNNNNGC 5 cut(s) 142, 151, 224, 928, 1001
NaeI GCCGGC 1 cut(s) 229
NdeII GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
NgoMIV GCCGGC 1 cut(s) 227
NlaIII CATG 2 cut(s) 176, 1004
NlaIV GGNNCC 4 cut(s) 286, 481, 541, 1086
NmeAIII GCCGAG 1 cut(s) 121
NmuCI GTSAC 1 cut(s) 888
PaeR7I CTCGAG 1 cut(s) 978
PceI AGGCCT 1 cut(s) 103
PciSI GCTCTTC 1 cut(s) 161
PdiI GCCGGC 1 cut(s) 229
PfeI GAWTC 1 cut(s) 510
PfoI TCCNGGA 1 cut(s) 505
PkrI GCNGC 2 cut(s) 388, 829
Ple19I CGATCG 1 cut(s) 935
PleI GAGTC 1 cut(s) 310
PpsI GAGTC 1 cut(s) 310
PsiI TTATAA 1 cut(s) 701
Psp124BI GAGCTC 2 cut(s) 156, 1104
Psp6I CCWGG 1 cut(s) 505
PspGI CCWGG 1 cut(s) 505
PspN4I GGNNCC 4 cut(s) 286, 481, 541, 1086
PspPI GGNCC 1 cut(s) 554
PsuI RGATCY 2 cut(s) 673, 847
PvuI CGATCG 1 cut(s) 935
RsaI GTAC 2 cut(s) 286, 1130
RsaNI GTAC 2 cut(s) 285, 1129
SacI GAGCTC 2 cut(s) 156, 1104
SapI GCTCTTC 1 cut(s) 161
SaqAI TTAA 2 cut(s) 323, 1216
SatI GCNGC 2 cut(s) 387, 828
Sau3AI GATC 6 cut(s) 34, 673, 714, 847, 932, 1123
Sau96I GGNCC 1 cut(s) 554
ScaI AGTACT 1 cut(s) 1130
SchI GAGTC 1 cut(s) 311
ScrFI CCNGG 1 cut(s) 507
SduI GDGCHC 4 cut(s) 156, 544, 814, 1104
SfaNI GCATC 4 cut(s) 166, 226, 641, 911
SfcI CTRYAG 1 cut(s) 403
Sfr274I CTCGAG 1 cut(s) 978
SgrAI CRCCGGYG 1 cut(s) 227
SinI GGWCC 1 cut(s) 554
SlaI CTCGAG 1 cut(s) 978
SmlI CTYRAG 2 cut(s) 815, 978
SmoI CTYRAG 2 cut(s) 815, 978
Sse9I AATT 8 cut(s) 311, 390, 427, 545, 605, 882, 1071, 1156
SseBI AGGCCT 1 cut(s) 103
SsiI CCGC 2 cut(s) 231, 239
SspMI CTAG 3 cut(s) 167, 578, 629
SstI GAGCTC 2 cut(s) 156, 1104
StuI AGGCCT 1 cut(s) 103
StyD4I CCNGG 1 cut(s) 505
TaaI ACNGT 1 cut(s) 338
TaiI ACGT 1 cut(s) 382
TaqI TCGA 5 cut(s) 106, 713, 795, 935, 979
TasI AATT 8 cut(s) 311, 390, 427, 545, 605, 882, 1071, 1156
TatI WGTACW 1 cut(s) 1128
TfiI GAWTC 1 cut(s) 510
Tru1I TTAA 2 cut(s) 323, 1216
Tru9I TTAA 2 cut(s) 323, 1216
TscAI CASTG 3 cut(s) 93, 748, 1114
TseFI GTSAC 1 cut(s) 888
TseI GCWGC 2 cut(s) 386, 827
Tsp45I GTSAC 1 cut(s) 888
TspRI CASTG 3 cut(s) 93, 748, 1114
VneI GTGCAC 1 cut(s) 810
VpaK11BI GGWCC 1 cut(s) 554
XapI RAATTY 3 cut(s) 427, 1071, 1156
XcmI CCANNNNNNNNNTGG 1 cut(s) 187
XhoI CTCGAG 1 cut(s) 978
XspI CTAG 3 cut(s) 167, 578, 629
ZrmI AGTACT 1 cut(s) 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.