Prupe.2G109100_v2.0.a1

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
16747368 .. 16756831
9464 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G109100.2

Sequence Viewer

Length: 1152 bp
ATGGCTTCTTTCGGCTCTACCCGACGCGAAGAAGATTCGGTTCTGGTACAACAAAATTTGTTTGTGAGGACATTGACATTGAACAGGCCACGGCAATTGAACGCGCTTAACTTTGAAATGATTTCTCGTCTGTTGGAACTTTTTCTGGCTTATGAGAAGGATGATAATGTCAAGCTGGTGATTGTCAAGGGGAAAGGTAGAGCATTTTGTGCCGGTGGTGATGTAGCTGCTGTGGTTCGTCAGATTAATGAAGGAAATTGGAGATTAGGTGCATATTTTTTTCAAAAGGAGTTTACCTTAAACTACTTGTTGGCAACATACAGTAAACCTCAGGTTTCAATTCTGAATGGAATTGTCATGGGAGGTGGGGCTGGTGCTTCAATTCATGGAAGATTCCGTGTTGCAACTGAGAATTCGGTTTTTGCAATGCCAGAGACAGCTTTGGGACTCTTTCCCGATGTAGGTGCCTCTTATTATTTGTCCAGACTTCCTGGATTCTTTGGAGAATATGTTGGTCTTACAGGTACCAGATTGGATGGTGCTGAAATGCTTGTGTGTGGTCTTGCTACTCACTTTGTTCCATCAACGAGATTGTCTTATTTAGAAGAAGCTCTATGCAAAGTTGACTCAAGTGATTTTAACATTATTCAAGCAATTATAGATAAATACTCGCAGAATCCGACTCTGAAAGAGAAAAGTGCTTACTACCGGATGGATGTTATAGACAAGTGCTTTTCTAGAAGAACAGTAGAGGAAATTTTATCTGCCCTTGAGAAGGAGGCTACAAACAGTGCGGATGCTTGGCTAACTTCAACAATTCAAGCACTAAAGAAGGCATCGCCAATGAGTTTGAAGATTTCCTTGAAATCGATTAGAGAAGGAAGGCTTCAGGGAGTTGGTCAATGCCTTGTTCGTGAATATAGAATGGTTTGCCATGTTCTGAAAGGAGAAGTCAGCAAGGACTTCAGAGAGGGCTGCAGAGCTATATTGTTAGACAAGGATAAGAACCCAAAGTGGGAGCCTTCTAAATTGGAGCTCGTTACTAACCATATGGTTGAGCAGTACTTCTCGAAGTTGGATGATGAAGGATGGGAAGAATTAGAACTTCCTGCAAGATCAAACTTGCCTGTAACTGCCATTGCAAAGCTTTGA

Protein Analysis

384

Amino Acids

42.87

Weight (kDa)

8.05

Isoelectric Point (pI)

27.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 524
AccB1I GGYRCC 2 cut(s) 464, 524
AccII CGCG 2 cut(s) 27, 104
AciI CCGC 1 cut(s) 794
AcsI RAATTY 3 cut(s) 55, 412, 756
AcuI CTGAAG 2 cut(s) 872, 949
AfaI GTAC 3 cut(s) 48, 526, 1064
AfiI CCNNNNNNNGG 3 cut(s) 461, 775, 1015
AjnI CCWGG 1 cut(s) 490
AluBI AGCT 7 cut(s) 175, 227, 440, 611, 983, 1036, 1147
AluI AGCT 7 cut(s) 175, 227, 440, 611, 983, 1036, 1147
Alw21I GWGCWC 1 cut(s) 1038
Alw26I GTCTC 1 cut(s) 428
AoxI GGCC 1 cut(s) 86
ApeKI GCWGC 2 cut(s) 227, 975
ApoI RAATTY 3 cut(s) 55, 412, 756
AseI ATTAAT 1 cut(s) 246
Asp700I GAANNNNTTC 1 cut(s) 141
Asp718I GGTACC 1 cut(s) 524
AspLEI GCGC 1 cut(s) 106
AsuHPI GGTGA 2 cut(s) 190, 230
AxyI CCTNAGG 1 cut(s) 330
BanI GGYRCC 2 cut(s) 464, 524
BanII GRGCYC 1 cut(s) 1038
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 2 cut(s) 214, 962
BccI CCATC 4 cut(s) 530, 589, 706, 1083
BceAI ACGGC 1 cut(s) 107
BcgI CGANNNNNNTGC 2 cut(s) 446, 480
BciT130I CCWGG 1 cut(s) 492
BcoDI GTCTC 1 cut(s) 428
BfaI CTAG 1 cut(s) 738
BfmI CTRYAG 1 cut(s) 976
BisI GCNGC 2 cut(s) 228, 976
BlsI GCNGC 2 cut(s) 229, 977
BmcAI AGTACT 1 cut(s) 1064
Bme1390I CCNGG 1 cut(s) 492
BmiI GGNNCC 3 cut(s) 466, 526, 1020
BmrFI CCNGG 1 cut(s) 492
BmsI GCATC 2 cut(s) 787, 845
BpuEI CTTGAG 2 cut(s) 613, 791
Bsa29I ATCGAT 1 cut(s) 869
BsaJI CCNNGG 1 cut(s) 89
BsaWI WCCGGW 1 cut(s) 708
BsaXI ACNNNNNCTCC 4 cut(s) 253, 283, 495, 525
Bsc4I CCNNNNNNNGG 3 cut(s) 461, 775, 1015
Bse118I RCCGGY 1 cut(s) 212
Bse21I CCTNAGG 1 cut(s) 330
Bse3DI GCAATG 2 cut(s) 432, 1137
BseBI CCWGG 1 cut(s) 492
BseCI ATCGAT 1 cut(s) 869
BseDI CCNNGG 1 cut(s) 89
BseGI GGATG 7 cut(s) 166, 541, 717, 721, 802, 1084, 1094
BseLI CCNNNNNNNGG 3 cut(s) 461, 775, 1015
BseMI GCAATG 2 cut(s) 432, 1137
BseMII CTCAG 2 cut(s) 344, 399
BseXI GCAGC 2 cut(s) 214, 962
Bsh1236I CGCG 2 cut(s) 27, 104
BshFI GGCC 1 cut(s) 88
BshNI GGYRCC 2 cut(s) 464, 524
BshVI ATCGAT 1 cut(s) 869
BsiHKAI GWGCWC 1 cut(s) 1038
BsiSI CCGG 2 cut(s) 213, 709
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 3 cut(s) 461, 775, 1015
BsmAI GTCTC 1 cut(s) 428
BsmFI GGGAC 1 cut(s) 459
BsnI GGCC 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 1038
Bsp143I GATC 1 cut(s) 1115
BspACI CCGC 1 cut(s) 794
BspANI GGCC 1 cut(s) 88
BspCNI CTCAG 2 cut(s) 343, 400
BspDI ATCGAT 1 cut(s) 869
BspFNI CGCG 2 cut(s) 27, 104
BspLI GGNNCC 3 cut(s) 466, 526, 1020
BspMAI CTGCAG 1 cut(s) 980
BspT107I GGYRCC 2 cut(s) 464, 524
BsrDI GCAATG 2 cut(s) 432, 1137
BsrFI RCCGGY 1 cut(s) 212
BssAI RCCGGY 1 cut(s) 212
BssECI CCNNGG 1 cut(s) 89
BssMI GATC 1 cut(s) 1115
Bst2UI CCWGG 1 cut(s) 492
Bst4CI ACNGT 3 cut(s) 323, 748, 791
BstAPI GCANNNNNTGC 1 cut(s) 209
BstDEI CTNAG 2 cut(s) 330, 408
BstDSI CCRYGG 1 cut(s) 89
BstENI CCTNNNNNAGG 1 cut(s) 773
BstF5I GGATG 7 cut(s) 166, 541, 717, 721, 802, 1084, 1094
BstFNI CGCG 2 cut(s) 27, 104
BstHHI GCGC 1 cut(s) 106
BstKTI GATC 1 cut(s) 1118
BstMAI GTCTC 1 cut(s) 428
BstMBI GATC 1 cut(s) 1115
BstMWI GCNNNNNNNGC 1 cut(s) 209
BstNI CCWGG 1 cut(s) 492
BstSCI CCNGG 1 cut(s) 490
BstSFI CTRYAG 1 cut(s) 976
BstUI CGCG 2 cut(s) 27, 104
BstV1I GCAGC 2 cut(s) 214, 962
Bsu15I ATCGAT 1 cut(s) 869
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 1 cut(s) 88
BsuTUI ATCGAT 1 cut(s) 869
BtgI CCRYGG 1 cut(s) 89
BtgZI GCGATG 1 cut(s) 822
BtsCI GGATG 7 cut(s) 166, 541, 717, 721, 802, 1084, 1094
BtsIMutI CAGTG 1 cut(s) 796
CfoI GCGC 1 cut(s) 106
Cfr10I RCCGGY 1 cut(s) 212
ClaI ATCGAT 1 cut(s) 869
CseI GACGC 1 cut(s) 33
Csp6I GTAC 3 cut(s) 47, 525, 1063
CspCI CAANNNNNGTGG 2 cut(s) 78, 113
CviAII CATG 3 cut(s) 358, 386, 935
CviQI GTAC 3 cut(s) 47, 525, 1063
DdeI CTNAG 2 cut(s) 330, 408
DpnI GATC 1 cut(s) 1117
DpnII GATC 1 cut(s) 1115
Ecl136II GAGCTC 1 cut(s) 1036
Eco24I GRGCYC 1 cut(s) 1038
Eco53kI GAGCTC 1 cut(s) 1036
Eco57I CTGAAG 2 cut(s) 872, 949
Eco81I CCTNAGG 1 cut(s) 330
EcoICRI GAGCTC 1 cut(s) 1036
EcoNI CCTNNNNNAGG 1 cut(s) 773
EcoRI GAATTC 1 cut(s) 412
EcoRII CCWGG 1 cut(s) 490
EcoT38I GRGCYC 1 cut(s) 1038
FaeI CATG 3 cut(s) 361, 389, 938
FalI AAGNNNNNCTT 4 cut(s) 845, 877, 870, 902
FaqI GGGAC 1 cut(s) 459
FatI CATG 3 cut(s) 357, 385, 934
FauNDI CATATG 1 cut(s) 1050
Fnu4HI GCNGC 2 cut(s) 228, 976
FokI GGATG 7 cut(s) 173, 548, 724, 728, 809, 1091, 1101
FriOI GRGCYC 1 cut(s) 1038
Fsp4HI GCNGC 2 cut(s) 228, 976
FspBI CTAG 1 cut(s) 738
GlaI GCGC 1 cut(s) 105
GluI GCNGC 2 cut(s) 228, 976
HaeIII GGCC 1 cut(s) 88
HapII CCGG 2 cut(s) 213, 709
HgaI GACGC 1 cut(s) 33
HhaI GCGC 1 cut(s) 106
Hin1II CATG 3 cut(s) 361, 389, 938
Hin6I GCGC 1 cut(s) 104
HinP1I GCGC 1 cut(s) 104
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HindIII AAGCTT 1 cut(s) 1145
HinfI GANTC 7 cut(s) 35, 393, 447, 495, 626, 676, 682
HpaII CCGG 2 cut(s) 213, 709
HphI GGTGA 2 cut(s) 190, 230
Hpy166II GTNNAC 3 cut(s) 294, 326, 625
Hpy188I TCNGA 6 cut(s) 243, 345, 681, 687, 942, 968
Hpy188III TCNNGA 5 cut(s) 455, 483, 738, 914, 1069
Hpy8I GTNNAC 3 cut(s) 294, 326, 625
Hpy99I CGWCG 1 cut(s) 27
HpyAV CCTTC 8 cut(s) 151, 245, 769, 826, 872, 876, 1032, 1079
HpyCH4III ACNGT 3 cut(s) 323, 748, 791
HpyCH4V TGCA 7 cut(s) 272, 404, 425, 618, 978, 1112, 1142
HpyF10VI GCNNNNNNNGC 1 cut(s) 209
HpyF3I CTNAG 2 cut(s) 330, 408
Hsp92II CATG 3 cut(s) 361, 389, 938
HspAI GCGC 1 cut(s) 104
KpnI GGTACC 1 cut(s) 528
Kzo9I GATC 1 cut(s) 1115
LmnI GCTCC 2 cut(s) 1018, 1033
Lsp1109I GCAGC 2 cut(s) 214, 962
LweI GCATC 2 cut(s) 787, 845
MaeI CTAG 1 cut(s) 738
MaeIII GTNAC 2 cut(s) 1039, 1129
MalI GATC 1 cut(s) 1117
MboI GATC 1 cut(s) 1115
MboII GAAGA 7 cut(s) 41, 44, 402, 617, 753, 865, 1106
MfeI CAATTG 1 cut(s) 95
MhlI GDGCHC 1 cut(s) 1038
MlyI GAGTC 3 cut(s) 441, 620, 676
MmeI TCCRAC 3 cut(s) 114, 704, 1056
MnlI CCTC 7 cut(s) 60, 339, 356, 478, 745, 772, 964
MroXI GAANNNNTTC 1 cut(s) 141
MseI TTAA 4 cut(s) 108, 246, 299, 639
MspI CCGG 2 cut(s) 213, 709
MspR9I CCNGG 1 cut(s) 492
MunI CAATTG 1 cut(s) 95
MvaI CCWGG 1 cut(s) 492
MvnI CGCG 2 cut(s) 27, 104
MwoI GCNNNNNNNGC 1 cut(s) 209
NdeI CATATG 1 cut(s) 1050
NdeII GATC 1 cut(s) 1115
NlaIII CATG 3 cut(s) 361, 389, 938
NlaIV GGNNCC 3 cut(s) 466, 526, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 677
PdmI GAANNNNTTC 1 cut(s) 141
PfeI GAWTC 4 cut(s) 35, 393, 495, 676
PfoI TCCNGGA 1 cut(s) 490
PkrI GCNGC 2 cut(s) 229, 977
PleI GAGTC 3 cut(s) 441, 620, 676
PpsI GAGTC 3 cut(s) 441, 620, 676
PshBI ATTAAT 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 1038
Psp6I CCWGG 1 cut(s) 490
PspGI CCWGG 1 cut(s) 490
PspN4I GGNNCC 3 cut(s) 466, 526, 1020
PstI CTGCAG 1 cut(s) 980
RsaI GTAC 3 cut(s) 48, 526, 1064
RsaNI GTAC 3 cut(s) 47, 525, 1063
SacI GAGCTC 1 cut(s) 1038
SaqAI TTAA 4 cut(s) 108, 246, 299, 639
SatI GCNGC 2 cut(s) 228, 976
Sau3AI GATC 1 cut(s) 1115
ScaI AGTACT 1 cut(s) 1064
SchI GAGTC 3 cut(s) 441, 620, 676
ScrFI CCNGG 1 cut(s) 492
SduI GDGCHC 1 cut(s) 1038
SfaNI GCATC 2 cut(s) 787, 845
SfcI CTRYAG 1 cut(s) 976
SmlI CTYRAG 2 cut(s) 628, 770
SmoI CTYRAG 2 cut(s) 628, 770
SsiI CCGC 1 cut(s) 794
SspMI CTAG 1 cut(s) 738
SstI GAGCTC 1 cut(s) 1038
StyD4I CCNGG 1 cut(s) 490
TaaI ACNGT 3 cut(s) 323, 748, 791
TaqI TCGA 2 cut(s) 869, 1070
TatI WGTACW 1 cut(s) 1062
TfiI GAWTC 4 cut(s) 35, 393, 495, 676
Tru1I TTAA 4 cut(s) 108, 246, 299, 639
Tru9I TTAA 4 cut(s) 108, 246, 299, 639
TscAI CASTG 1 cut(s) 796
TseI GCWGC 2 cut(s) 227, 975
TspDTI ATGAA 3 cut(s) 264, 374, 1098
TspGWI ACGGA 1 cut(s) 386
TspRI CASTG 1 cut(s) 796
VspI ATTAAT 1 cut(s) 246
XagI CCTNNNNNAGG 1 cut(s) 773
XapI RAATTY 3 cut(s) 55, 412, 756
XbaI TCTAGA 1 cut(s) 737
XmnI GAANNNNTTC 1 cut(s) 141
XspI CTAG 1 cut(s) 738
ZrmI AGTACT 1 cut(s) 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.