Prupe.2G207400_v2.0.a1

Enoyl-CoA hydratase/isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000464
Physical Location & Seq
Forward (+)
24129586 .. 24130193
608 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G207400.1

Sequence Viewer

Length: 177 bp
ATGGTGCTGAAATGCTTGCTTGTGGTAGCAACTCACTTTGTTCCCTCAGCCAAATTGCCTCTACTGGAAAAAGCTCTGATTTCCAGAGCAGCTTCAGCTACTTCCTCAAGCCTTGATCTTGCTTTTATTTCAGCAATTATAGATGAACACTCCCTACAACAACCGGCCCTGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00280 ko00410 ko00640 ko01100 ko01200 map00280 map00410 map00640 map01100 map01200
Pfam Domains
Protein Families
ECH_2

Protein Analysis

59

Amino Acids

6.14

Weight (kDa)

6.7

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 78
AluBI AGCT 3 cut(s) 74, 92, 98
AluI AGCT 3 cut(s) 74, 92, 98
AoxI GGCC 1 cut(s) 165
ApeKI GCWGC 1 cut(s) 89
AspS9I GGNCC 1 cut(s) 166
BbvCI CCTCAGC 1 cut(s) 46
BbvI GCAGC 1 cut(s) 101
BfaI CTAG 1 cut(s) 175
BisI GCNGC 1 cut(s) 90
BlsI GCNGC 1 cut(s) 91
BmgT120I GGNCC 1 cut(s) 166
Bpu10I CCTNAGC 1 cut(s) 46
BpuEI CTTGAG 1 cut(s) 91
Bse118I RCCGGY 1 cut(s) 163
Bse1I ACTGG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 60
BseNI ACTGG 1 cut(s) 69
BseXI GCAGC 1 cut(s) 101
BshFI GGCC 1 cut(s) 167
BsiSI CCGG 1 cut(s) 164
BsnI GGCC 1 cut(s) 167
Bsp143I GATC 1 cut(s) 115
BspANI GGCC 1 cut(s) 167
BspCNI CTCAG 1 cut(s) 59
BsrFI RCCGGY 1 cut(s) 163
BsrI ACTGG 1 cut(s) 69
BssAI RCCGGY 1 cut(s) 163
BssMI GATC 1 cut(s) 115
BstC8I GCNNGC 1 cut(s) 17
BstDEI CTNAG 1 cut(s) 46
BstKTI GATC 1 cut(s) 118
BstMBI GATC 1 cut(s) 115
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstV1I GCAGC 1 cut(s) 101
BsuRI GGCC 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 17
Cfr10I RCCGGY 1 cut(s) 163
Cfr13I GGNCC 1 cut(s) 166
CviJI RGCY 6 cut(s) 50, 74, 92, 98, 111, 167
CviKI_1 RGCY 6 cut(s) 50, 74, 92, 98, 111, 167
DdeI CTNAG 1 cut(s) 46
DpnI GATC 1 cut(s) 117
DpnII GATC 1 cut(s) 115
Eco57I CTGAAG 1 cut(s) 78
FaiI YATR 1 cut(s) 140
Fnu4HI GCNGC 1 cut(s) 90
Fsp4HI GCNGC 1 cut(s) 90
FspBI CTAG 1 cut(s) 175
GluI GCNGC 1 cut(s) 90
HaeIII GGCC 1 cut(s) 167
HapII CCGG 1 cut(s) 164
HpaII CCGG 1 cut(s) 164
Hpy188I TCNGA 1 cut(s) 78
Hpy188III TCNNGA 1 cut(s) 84
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpyF3I CTNAG 1 cut(s) 46
Kzo9I GATC 1 cut(s) 115
LpnPI CCDG 2 cut(s) 50, 97
Lsp1109I GCAGC 1 cut(s) 101
MaeI CTAG 1 cut(s) 175
MalI GATC 1 cut(s) 117
MboI GATC 1 cut(s) 115
MluCI AATT 2 cut(s) 53, 135
MnlI CCTC 3 cut(s) 55, 69, 115
MspI CCGG 1 cut(s) 164
MwoI GCNNNNNNNGC 1 cut(s) 95
NdeII GATC 1 cut(s) 115
PkrI GCNGC 1 cut(s) 91
PspPI GGNCC 1 cut(s) 166
PsrI GAACNNNNNNTAC 2 cut(s) 138, 170
SatI GCNGC 1 cut(s) 90
Sau3AI GATC 1 cut(s) 115
Sau96I GGNCC 1 cut(s) 166
SetI ASST 3 cut(s) 76, 94, 100
SgeI CNNG 7 cut(s) 28, 32, 77, 96, 120, 125, 131
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
Sse9I AATT 2 cut(s) 53, 135
SspMI CTAG 1 cut(s) 175
TasI AATT 2 cut(s) 53, 135
TseI GCWGC 1 cut(s) 89
TspDTI ATGAA 1 cut(s) 159
XspI CTAG 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.