FvH4_7g15030

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
13110921 .. 13112308
1388 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15030.t1

Sequence Viewer

Length: 1194 bp
ATGGCTTCCCTCATCTCAGATCTTCATTCCAGCGATCCCGAGATTCTGGTACGAAAGAATAATCGATTCGTGACGACGTTGACACTCAACAGGCCTCGGAAGTTGAATGCCCTCTCGGTTTCAATGCTGTCACGGCTGTCGGAGCTGTTCCTCCGTTGCGACAACGATCCCCATGTCAAGTTGGTCATTCTCAAAGCTACCGGCAAGACATTTTCACCGGGCGGCGACATTGCTTCTGTAGCTCAGCATCTCTACAATGGCAATGTGAGAGCTGCTTGCAGAAGTTTCGCAACTGCATACAGCTTAATGTACTTGGTGGCAACAAAGACTAGACCCCAGGTTTCATTTCTCAATGGAATGACCATGGGGACCGGCGCAGGTGTTTCTATACACGGTAGCTTTCGTGTCACGACGGAGAAGACGGTGTTTGCTATGCCGGAAGCAGCTATCGGAGGGTTTCCTGATGTTGGTTCCTCTTATTTCCTGTCTAGACTTCCTGGATTCTTTGGAGAGTATCTTGGTCTAACAGGTGCTAAATTGGATGGTCCTGAAATGCTTGCTTTGGGTCTAGCAACTCACTTTGTTCCCTCATCTAAATTGGCTTCGCTAGAAGAAGCCCTAGTGAGAACACTCGGTGCTTTACCTAATACAAGCTCTAGTGATGACCGGGCTTTTATTTCAGCTATTCTAGATGCATACTCGGAGCAGCCAGCTTTGAAAGCGAAGAGTGCTTACCACCGTATGGATGTCATCGACAAGTGCTTTTCTCAATCAACAGTGGAAGAAATTTTAAGTAGCCTTGAGAAGGAGTATGCTACATCAACCAACACAAGTGATCATCATGAATGGTTATCTTCATCGATTCAATCAATGAAAAGCGCATCGCCGATAAGTTTGAAGATTGCTCTGAGATCGATTCGAGGAGGAAGGAATCTGCAAGGAGTCGGTGAGTGCATTGTTCGCGAATATAGGATTATTTGTCATGTTTTGCGTGGGGAAATCAGCAAGGATTTCATGGAGGGTTGCAGAGCTATACTGTTGGACAAGGATAAGAACCCAAAGTGGGAGCCTTCTAGATTAGAGCTTGTCACTGACCATATGGTTAGCCACTACTTCTCTAGGTTGGATGATGACGAAGAATTAAAGCGCCCTCAAACATCAAAATTGTCTGTAACTCCCATTTCCAAGCTTTGA

Protein Analysis

398

Amino Acids

43.6

Weight (kDa)

8.62

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_1 PF00378 23 - 269 2.2e-25 Enoyl-CoA hydratase/isomerase
ECH_2 PF16113 25 - 372 2e-112 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 368
Acc36I ACCTGC 1 cut(s) 368
AccB7I CCANNNNNTGG 1 cut(s) 742
AccII CGCG 1 cut(s) 963
AciI CCGC 1 cut(s) 222
AclWI GGATC 2 cut(s) 29, 161
AcsI RAATTY 1 cut(s) 786
AdeI CACNNNGTG 1 cut(s) 635
AfaI GTAC 2 cut(s) 51, 311
AfiI CCNNNNNNNGG 4 cut(s) 467, 742, 805, 1063
AgsI TTSAA 5 cut(s) 106, 123, 718, 866, 898
AjnI CCWGG 2 cut(s) 336, 496
AlwI GGATC 2 cut(s) 29, 161
Ama87I CYCGRG 1 cut(s) 38
AoxI GGCC 1 cut(s) 92
ApeKI GCWGC 3 cut(s) 272, 443, 706
ApoI RAATTY 1 cut(s) 786
AspLEI GCGC 3 cut(s) 377, 881, 1149
AspS9I GGNCC 2 cut(s) 369, 545
AsuC2I CCSGG 2 cut(s) 219, 668
AsuHPI GGTGA 2 cut(s) 207, 959
AvaI CYCGRG 1 cut(s) 38
AvaII GGWCC 2 cut(s) 369, 545
BarI GAAGNNNNNNTAC 2 cut(s) 716, 748
BbsI GAAGAC 1 cut(s) 425
BbvI GCAGC 3 cut(s) 259, 455, 718
BccI CCATC 1 cut(s) 536
BceAI ACGGC 1 cut(s) 149
BcgI CGANNNNNNTGC 2 cut(s) 268, 302
BciT130I CCWGG 2 cut(s) 338, 498
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 2 cut(s) 219, 668
BfaI CTAG 9 cut(s) 330, 489, 569, 608, 620, 657, 689, 1074, 1119
BfmI CTRYAG 1 cut(s) 237
BfoI RGCGCY 1 cut(s) 1150
BfuAI ACCTGC 1 cut(s) 368
BglII AGATCT 1 cut(s) 19
BisI GCNGC 4 cut(s) 223, 273, 444, 707
BlpI GCTNAGC 1 cut(s) 243
BlsI GCNGC 4 cut(s) 224, 274, 445, 708
Bme1390I CCNGG 4 cut(s) 219, 338, 498, 668
Bme18I GGWCC 2 cut(s) 369, 545
BmeT110I CYCGRG 1 cut(s) 38
BmgT120I GGNCC 2 cut(s) 369, 545
BmiI GGNNCC 3 cut(s) 370, 472, 1068
BmrFI CCNGG 4 cut(s) 219, 338, 498, 668
BmsI GCATC 3 cut(s) 256, 682, 890
BpiI GAAGAC 1 cut(s) 425
Bpu1102I GCTNAGC 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 821
BpuMI CCSGG 2 cut(s) 219, 668
Bsa29I ATCGAT 3 cut(s) 64, 860, 914
BsaJI CCNNGG 3 cut(s) 95, 336, 363
Bsc4I CCNNNNNNNGG 4 cut(s) 467, 742, 805, 1063
Bse118I RCCGGY 2 cut(s) 200, 371
Bse3DI GCAATG 2 cut(s) 228, 268
BseBI CCWGG 2 cut(s) 338, 498
BseCI ATCGAT 3 cut(s) 64, 860, 914
BseDI CCNNGG 3 cut(s) 95, 336, 363
BseGI GGATG 3 cut(s) 547, 751, 1132
BseLI CCNNNNNNNGG 4 cut(s) 467, 742, 805, 1063
BseMI GCAATG 2 cut(s) 228, 268
BseMII CTCAG 3 cut(s) 30, 257, 899
BseRI GAGGAG 1 cut(s) 936
BseXI GCAGC 3 cut(s) 259, 455, 718
Bsh1236I CGCG 1 cut(s) 963
BshFI GGCC 1 cut(s) 94
BshVI ATCGAT 3 cut(s) 64, 860, 914
BsiHKCI CYCGRG 1 cut(s) 38
BsiSI CCGG 5 cut(s) 201, 218, 372, 437, 667
BslFI GGGAC 1 cut(s) 382
BslI CCNNNNNNNGG 4 cut(s) 467, 742, 805, 1063
BsmFI GGGAC 1 cut(s) 382
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 1 cut(s) 94
BsoBI CYCGRG 1 cut(s) 38
Bsp143I GATC 5 cut(s) 19, 34, 166, 835, 911
Bsp1720I GCTNAGC 1 cut(s) 243
Bsp19I CCATGG 1 cut(s) 363
Bsp68I TCGCGA 1 cut(s) 963
BspACI CCGC 1 cut(s) 222
BspANI GGCC 1 cut(s) 94
BspCNI CTCAG 3 cut(s) 29, 256, 900
BspDI ATCGAT 3 cut(s) 64, 860, 914
BspFNI CGCG 1 cut(s) 963
BspHI TCATGA 1 cut(s) 841
BspLI GGNNCC 3 cut(s) 370, 472, 1068
BspMI ACCTGC 1 cut(s) 368
BspPI GGATC 2 cut(s) 29, 161
BsrDI GCAATG 2 cut(s) 228, 268
BsrFI RCCGGY 2 cut(s) 200, 371
BssAI RCCGGY 2 cut(s) 200, 371
BssECI CCNNGG 3 cut(s) 95, 336, 363
BssMI GATC 5 cut(s) 19, 34, 166, 835, 911
BssT1I CCWWGG 1 cut(s) 363
Bst2UI CCWGG 2 cut(s) 338, 498
Bst4CI ACNGT 5 cut(s) 395, 424, 740, 778, 1038
Bst6I CTCTTC 1 cut(s) 719
BstC8I GCNNGC 3 cut(s) 277, 558, 711
BstDEI CTNAG 3 cut(s) 16, 243, 908
BstDSI CCRYGG 1 cut(s) 363
BstENI CCTNNNNNAGG 1 cut(s) 803
BstF5I GGATG 3 cut(s) 547, 751, 1132
BstFNI CGCG 1 cut(s) 963
BstH2I RGCGCY 1 cut(s) 1150
BstHHI GCGC 3 cut(s) 377, 881, 1149
BstKTI GATC 5 cut(s) 22, 37, 169, 838, 914
BstMBI GATC 5 cut(s) 19, 34, 166, 835, 911
BstMWI GCNNNNNNNGC 6 cut(s) 133, 142, 239, 719, 728, 960
BstNI CCWGG 2 cut(s) 338, 498
BstSCI CCNGG 4 cut(s) 217, 336, 496, 666
BstSFI CTRYAG 1 cut(s) 237
BstUI CGCG 1 cut(s) 963
BstV1I GCAGC 3 cut(s) 259, 455, 718
BstV2I GAAGAC 1 cut(s) 425
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
Bsu15I ATCGAT 3 cut(s) 64, 860, 914
BsuRI GGCC 1 cut(s) 94
BsuTUI ATCGAT 3 cut(s) 64, 860, 914
BtgI CCRYGG 1 cut(s) 363
BtgZI GCGATG 1 cut(s) 867
BtsCI GGATG 3 cut(s) 547, 751, 1132
BtsIMutI CAGTG 2 cut(s) 783, 1089
BtuMI TCGCGA 1 cut(s) 963
BveI ACCTGC 1 cut(s) 368
Cac8I GCNNGC 3 cut(s) 277, 558, 711
CciI TCATGA 1 cut(s) 841
CfoI GCGC 3 cut(s) 377, 881, 1149
Cfr10I RCCGGY 2 cut(s) 200, 371
Cfr13I GGNCC 2 cut(s) 369, 545
ClaI ATCGAT 3 cut(s) 64, 860, 914
Csp6I GTAC 2 cut(s) 50, 310
CviAII CATG 5 cut(s) 173, 364, 842, 983, 1015
CviQI GTAC 2 cut(s) 50, 310
DdeI CTNAG 3 cut(s) 16, 243, 908
DpnI GATC 5 cut(s) 21, 36, 168, 837, 913
DpnII GATC 5 cut(s) 19, 34, 166, 835, 911
DraIII CACNNNGTG 1 cut(s) 635
Eam1104I CTCTTC 1 cut(s) 719
EarI CTCTTC 1 cut(s) 719
Eco130I CCWWGG 1 cut(s) 363
Eco147I AGGCCT 1 cut(s) 94
Eco47I GGWCC 2 cut(s) 369, 545
Eco88I CYCGRG 1 cut(s) 38
EcoNI CCTNNNNNAGG 1 cut(s) 803
EcoRII CCWGG 2 cut(s) 336, 496
EcoT14I CCWWGG 1 cut(s) 363
EcoT22I ATGCAT 1 cut(s) 697
ErhI CCWWGG 1 cut(s) 363
FaeI CATG 5 cut(s) 176, 367, 845, 986, 1018
FaqI GGGAC 1 cut(s) 382
FatI CATG 5 cut(s) 172, 363, 841, 982, 1014
FauNDI CATATG 1 cut(s) 1098
FbaI TGATCA 1 cut(s) 835
Fnu4HI GCNGC 4 cut(s) 223, 273, 444, 707
FokI GGATG 3 cut(s) 554, 758, 1139
Fsp4HI GCNGC 4 cut(s) 223, 273, 444, 707
FspBI CTAG 9 cut(s) 330, 489, 569, 608, 620, 657, 689, 1074, 1119
GlaI GCGC 3 cut(s) 376, 880, 1148
GluI GCNGC 4 cut(s) 223, 273, 444, 707
HaeII RGCGCY 1 cut(s) 1150
HaeIII GGCC 1 cut(s) 94
HapII CCGG 5 cut(s) 201, 218, 372, 437, 667
HhaI GCGC 3 cut(s) 377, 881, 1149
Hin1II CATG 5 cut(s) 176, 367, 845, 986, 1018
Hin6I GCGC 3 cut(s) 375, 879, 1147
HinP1I GCGC 3 cut(s) 375, 879, 1147
HincII GTYRAC 1 cut(s) 81
HindII GTYRAC 1 cut(s) 81
HindIII AAGCTT 1 cut(s) 1187
HinfI GANTC 7 cut(s) 43, 66, 501, 862, 916, 931, 942
HpaII CCGG 5 cut(s) 201, 218, 372, 437, 667
HphI GGTGA 2 cut(s) 207, 959
Hpy166II GTNNAC 1 cut(s) 81
Hpy188I TCNGA 6 cut(s) 19, 99, 142, 452, 703, 909
Hpy8I GTNNAC 1 cut(s) 81
Hpy99I CGWCG 2 cut(s) 79, 415
HpyAV CCTTC 3 cut(s) 799, 921, 1080
HpyCH4III ACNGT 5 cut(s) 395, 424, 740, 778, 1038
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 6 cut(s) 279, 296, 695, 937, 954, 1026
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 142, 239, 719, 728, 960
HpyF3I CTNAG 3 cut(s) 16, 243, 908
HpySE526I ACGT 1 cut(s) 77
Hsp92II CATG 5 cut(s) 176, 367, 845, 986, 1018
HspAI GCGC 3 cut(s) 375, 879, 1147
Ksp22I TGATCA 1 cut(s) 835
Kzo9I GATC 5 cut(s) 19, 34, 166, 835, 911
LmnI GCTCC 3 cut(s) 142, 703, 1066
Lsp1109I GCAGC 3 cut(s) 259, 455, 718
LweI GCATC 3 cut(s) 256, 682, 890
MaeI CTAG 9 cut(s) 330, 489, 569, 608, 620, 657, 689, 1074, 1119
MaeII ACGT 1 cut(s) 77
MaeIII GTNAC 5 cut(s) 70, 129, 406, 1087, 1171
MalI GATC 5 cut(s) 21, 36, 168, 837, 913
MboI GATC 5 cut(s) 19, 34, 166, 835, 911
MboII GAAGA 8 cut(s) 14, 430, 623, 736, 794, 846, 910, 1148
MflI RGATCY 1 cut(s) 19
MluCI AATT 5 cut(s) 536, 596, 786, 1139, 1163
MlyI GAGTC 1 cut(s) 951
MmeI TCCRAC 3 cut(s) 120, 1020, 1104
Mph1103I ATGCAT 1 cut(s) 697
MseI TTAA 3 cut(s) 305, 791, 1142
MspI CCGG 5 cut(s) 201, 218, 372, 437, 667
MspR9I CCNGG 4 cut(s) 219, 338, 498, 668
Mva1269I GAATGC 1 cut(s) 112
MvaI CCWGG 2 cut(s) 338, 498
MvnI CGCG 1 cut(s) 963
MwoI GCNNNNNNNGC 6 cut(s) 133, 142, 239, 719, 728, 960
NciI CCSGG 2 cut(s) 219, 668
NcoI CCATGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 1098
NdeII GATC 5 cut(s) 19, 34, 166, 835, 911
NlaIII CATG 5 cut(s) 176, 367, 845, 986, 1018
NlaIV GGNNCC 3 cut(s) 370, 472, 1068
NmuCI GTSAC 4 cut(s) 70, 129, 406, 1087
NruI TCGCGA 1 cut(s) 963
NsiI ATGCAT 1 cut(s) 697
PagI TCATGA 1 cut(s) 841
PaqCI CACCTGC 1 cut(s) 368
PceI AGGCCT 1 cut(s) 94
PctI GAATGC 1 cut(s) 112
PfeI GAWTC 6 cut(s) 43, 66, 501, 862, 916, 931
PflMI CCANNNNNTGG 1 cut(s) 742
PfoI TCCNGGA 1 cut(s) 496
PkrI GCNGC 4 cut(s) 224, 274, 445, 708
PleI GAGTC 1 cut(s) 950
PpsI GAGTC 1 cut(s) 950
Psp6I CCWGG 2 cut(s) 336, 496
PspGI CCWGG 2 cut(s) 336, 496
PspN4I GGNNCC 3 cut(s) 370, 472, 1068
PspPI GGNCC 2 cut(s) 369, 545
PsuI RGATCY 1 cut(s) 19
RruI TCGCGA 1 cut(s) 963
RsaI GTAC 2 cut(s) 51, 311
RsaNI GTAC 2 cut(s) 50, 310
SaqAI TTAA 3 cut(s) 305, 791, 1142
SatI GCNGC 4 cut(s) 223, 273, 444, 707
Sau3AI GATC 5 cut(s) 19, 34, 166, 835, 911
Sau96I GGNCC 2 cut(s) 369, 545
SchI GAGTC 1 cut(s) 951
ScrFI CCNGG 4 cut(s) 219, 338, 498, 668
SfaNI GCATC 3 cut(s) 256, 682, 890
SfcI CTRYAG 1 cut(s) 237
SinI GGWCC 2 cut(s) 369, 545
SmlI CTYRAG 1 cut(s) 800
SmoI CTYRAG 1 cut(s) 800
Sse9I AATT 5 cut(s) 536, 596, 786, 1139, 1163
SseBI AGGCCT 1 cut(s) 94
SsiI CCGC 1 cut(s) 222
SspMI CTAG 9 cut(s) 330, 489, 569, 608, 620, 657, 689, 1074, 1119
StuI AGGCCT 1 cut(s) 94
StyD4I CCNGG 4 cut(s) 217, 336, 496, 666
StyI CCWWGG 1 cut(s) 363
TaaI ACNGT 5 cut(s) 395, 424, 740, 778, 1038
TaiI ACGT 1 cut(s) 80
TaqI TCGA 5 cut(s) 64, 753, 860, 914, 919
TasI AATT 5 cut(s) 536, 596, 786, 1139, 1163
TatI WGTACW 1 cut(s) 309
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 6 cut(s) 43, 66, 501, 862, 916, 931
Tru1I TTAA 3 cut(s) 305, 791, 1142
Tru9I TTAA 3 cut(s) 305, 791, 1142
TscAI CASTG 2 cut(s) 783, 1096
TseFI GTSAC 4 cut(s) 70, 129, 406, 1087
TseI GCWGC 3 cut(s) 272, 443, 706
Tsp45I GTSAC 4 cut(s) 70, 129, 406, 1087
TspDTI ATGAA 6 cut(s) 14, 333, 846, 858, 887, 1003
TspGWI ACGGA 2 cut(s) 143, 428
TspRI CASTG 2 cut(s) 783, 1096
Van91I CCANNNNNTGG 1 cut(s) 742
VpaK11BI GGWCC 2 cut(s) 369, 545
XagI CCTNNNNNAGG 1 cut(s) 803
XapI RAATTY 1 cut(s) 786
XbaI TCTAGA 3 cut(s) 488, 688, 1073
XspI CTAG 9 cut(s) 330, 489, 569, 608, 620, 657, 689, 1074, 1119
Zsp2I ATGCAT 1 cut(s) 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.