Rw0G022950

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01065
Physical Location & Seq
Forward (+)
15092 .. 16273
1182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G022950.1

Sequence Viewer

Length: 1137 bp
ATGGCTTCTTTCATCAACTCAGATGAAGATGATCAAATTTTGATACAACAGAACTTGTTTGCGAGGATGTTGACACTAAACAGGCCTCGGCAACTGAACGCTCTCTCCTTCGAAATGCTCTCTCAGCTGTCCCAACTATTCCAAGCCTATGAGGACGATGCCAATGTCAAGTTGGTTATTCTCAAAGGCAAAGGAAGAGCATTTTGTGCCGGCGGTGATGTGGCGGTGGTGGCTCGTCATCTTTTCAAAGGCAACTGGAGATTTGGTGCCCAACAAGGTAAGAGAGTTTCAGTGCTCAATGGAATTGTCATGGGAGGTGGCGCCGGAGTTTCTATACACGGTAGGTTTCGTGTAGCAACTGAGAACTCGATGTTTGCTTTGCCGGAAACAGCTCTCGGGCTGTTTCCAGATTTAGGTGCCTCTTCTTTTTTGTCAAGGCTTCCTGGATTCTTTGGAGAATATCTTGGTCTTACTGGTGCTCGATTGGACGGTCCTGAAATGCTCGCTTGTGGTTTAGCAACTCATTTTGTTCCCTCAGCCAAATTGGCCTCATTAGAAGAAGCTCTAGTATCGAAAGTTGCTTCAACAAATATATCAAGCGGTGACCTTGCTGATAATATTTCAGCTATTATTAATCAATACTCGATGCAACCAGCTATAAAAGAGAAAAGTGCTTGCTACAAAATGGATGTTATTGATGAGTGCTTTTCTAAGAGATCAGTGGAGGAAATATTAAGTGCTCTTGAGAAGGAGCTTGCTACTATTGGTCTAAATGGTTGTGAATGGTTGTCTTCATCGATTGAATCCCTGAAGAGGGCGTCGCCGATAAGTTTGAAGATTACATTGAGATCGATTCGAGAAGGAAGGATGCAAGGAGTTGGCGAGTGCCTTGTTCGTGAGTACAGAATGTTTTGCCATGTTGTGAGAGGAGAAATCAGCAAGGACTTCAGGGAGGGTTGTAGAGCTATATTGTTGGATAAGGATAAGAACCCGAAATGGGAGCCTTGTAAGTTGGAACTCATCACTGACAAGATGGTTGATCACTACTTCTCGAAGTTGGATGGTGATGAAGAATTGGAAGAGTTAAGGCTGCCTGAAAGATCCAATTTGTATGGTACTGCCATTGCCAAGCTTTAA

Protein Analysis

378

Amino Acids

41.69

Weight (kDa)

6.07

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 22 - 350 2.1e-105 Enoyl-CoA hydratase/isomerase
ECH_1 PF00378 24 - 200 4.3e-26 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 266, 320, 416
AciI CCGC 3 cut(s) 213, 224, 600
AclWI GGATC 1 cut(s) 1095
AcsI RAATTY 1 cut(s) 36
AcuI CTGAAG 2 cut(s) 830, 931
AcyI GRCGYC 2 cut(s) 321, 818
AfaI GTAC 2 cut(s) 902, 1117
AfiI CCNNNNNNNGG 4 cut(s) 413, 813, 814, 997
AgsI TTSAA 4 cut(s) 247, 585, 803, 835
AjnI CCWGG 1 cut(s) 442
AloI GAACNNNNNNTCC 2 cut(s) 89, 121
AluBI AGCT 8 cut(s) 127, 392, 563, 626, 656, 754, 965, 1132
AluI AGCT 8 cut(s) 127, 392, 563, 626, 656, 754, 965, 1132
Alw21I GWGCWC 3 cut(s) 297, 481, 742
AlwI GGATC 1 cut(s) 1095
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 2 cut(s) 83, 546
ApeKI GCWGC 1 cut(s) 1090
ApoI RAATTY 1 cut(s) 36
AseI ATTAAT 1 cut(s) 633
AspLEI GCGC 1 cut(s) 323
AspS9I GGNCC 1 cut(s) 491
AsuHPI GGTGA 3 cut(s) 227, 614, 1076
AsuII TTCGAA 1 cut(s) 111
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 1 cut(s) 491
BaeGI GKGCMC 1 cut(s) 271
BanI GGYRCC 3 cut(s) 266, 320, 416
BbsI GAAGAC 1 cut(s) 783
Bbv12I GWGCWC 3 cut(s) 297, 481, 742
BbvCI CCTCAGC 1 cut(s) 535
BbvI GCAGC 1 cut(s) 1077
BccI CCATC 2 cut(s) 1027, 1055
BciT130I CCWGG 1 cut(s) 444
BclI TGATCA 2 cut(s) 31, 1039
BfaI CTAG 1 cut(s) 566
BfoI RGCGCY 1 cut(s) 324
BglI GCCNNNNNGGC 1 cut(s) 545
BisI GCNGC 1 cut(s) 1091
BlsI GCNGC 1 cut(s) 1092
Bme1390I CCNGG 1 cut(s) 444
Bme18I GGWCC 1 cut(s) 491
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 1 cut(s) 491
BmiI GGNNCC 4 cut(s) 268, 322, 418, 1002
BmrFI CCNGG 1 cut(s) 444
BmsI GCATC 3 cut(s) 148, 636, 858
BpiI GAAGAC 1 cut(s) 783
BpmI CTGGAG 1 cut(s) 277
Bpu10I CCTNAGC 1 cut(s) 535
Bpu14I TTCGAA 1 cut(s) 111
BpuEI CTTGAG 1 cut(s) 764
Bsa29I ATCGAT 2 cut(s) 797, 851
BsaHI GRCGYC 2 cut(s) 321, 818
BsaJI CCNNGG 1 cut(s) 86
BsaXI ACNNNNNCTCC 4 cut(s) 89, 119, 250, 280
Bsc4I CCNNNNNNNGG 4 cut(s) 413, 813, 814, 997
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 2 cut(s) 260, 478
Bse3DI GCAATG 1 cut(s) 1122
BseBI CCWGG 1 cut(s) 444
BseCI ATCGAT 2 cut(s) 797, 851
BseDI CCNNGG 1 cut(s) 86
BseGI GGATG 4 cut(s) 72, 694, 873, 1066
BseLI CCNNNNNNNGG 4 cut(s) 413, 813, 814, 997
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 4 cut(s) 33, 137, 351, 549
BseNI ACTGG 2 cut(s) 260, 478
BseRI GAGGAG 1 cut(s) 942
BseSI GKGCMC 1 cut(s) 271
BseXI GCAGC 1 cut(s) 1077
BshFI GGCC 2 cut(s) 85, 548
BshNI GGYRCC 3 cut(s) 266, 320, 416
BshVI ATCGAT 2 cut(s) 797, 851
BsiHKAI GWGCWC 3 cut(s) 297, 481, 742
BsiHKCI CYCGRG 1 cut(s) 395
BsiSI CCGG 3 cut(s) 210, 324, 383
BslFI GGGAC 1 cut(s) 115
BslI CCNNNNNNNGG 4 cut(s) 413, 813, 814, 997
BsmFI GGGAC 1 cut(s) 115
BsnI GGCC 2 cut(s) 85, 548
BsoBI CYCGRG 1 cut(s) 395
Bsp119I TTCGAA 1 cut(s) 111
Bsp1286I GDGCHC 4 cut(s) 271, 297, 481, 742
Bsp143I GATC 5 cut(s) 31, 716, 848, 1039, 1100
BspACI CCGC 3 cut(s) 213, 224, 600
BspANI GGCC 2 cut(s) 85, 548
BspCNI CTCAG 4 cut(s) 32, 136, 352, 548
BspDI ATCGAT 2 cut(s) 797, 851
BspLI GGNNCC 4 cut(s) 268, 322, 418, 1002
BspPI GGATC 1 cut(s) 1095
BspQI GCTCTTC 1 cut(s) 190
BspT104I TTCGAA 1 cut(s) 111
BspT107I GGYRCC 3 cut(s) 266, 320, 416
BsrDI GCAATG 1 cut(s) 1122
BsrFI RCCGGY 1 cut(s) 209
BsrI ACTGG 2 cut(s) 260, 478
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 1 cut(s) 86
BssMI GATC 5 cut(s) 31, 716, 848, 1039, 1100
BssNI GRCGYC 2 cut(s) 321, 818
Bst2UI CCWGG 1 cut(s) 444
Bst4CI ACNGT 2 cut(s) 341, 491
Bst6I CTCTTC 4 cut(s) 190, 427, 806, 1074
BstACI GRCGYC 2 cut(s) 321, 818
BstAPI GCANNNNNTGC 1 cut(s) 206
BstBI TTCGAA 1 cut(s) 111
BstC8I GCNNGC 4 cut(s) 211, 504, 676, 756
BstDEI CTNAG 5 cut(s) 19, 123, 360, 535, 711
BstEII GGTNACC 1 cut(s) 602
BstF5I GGATG 4 cut(s) 72, 694, 873, 1066
BstH2I RGCGCY 1 cut(s) 324
BstHHI GCGC 1 cut(s) 323
BstKTI GATC 5 cut(s) 34, 719, 851, 1042, 1103
BstMBI GATC 5 cut(s) 31, 716, 848, 1039, 1100
BstMWI GCNNNNNNNGC 4 cut(s) 124, 206, 230, 545
BstNI CCWGG 1 cut(s) 444
BstPI GGTNACC 1 cut(s) 602
BstSCI CCNGG 1 cut(s) 442
BstSLI GKGCMC 1 cut(s) 271
BstV1I GCAGC 1 cut(s) 1077
BstV2I GAAGAC 1 cut(s) 783
BstX2I RGATCY 1 cut(s) 1100
BstYI RGATCY 1 cut(s) 1100
Bsu15I ATCGAT 2 cut(s) 797, 851
BsuRI GGCC 2 cut(s) 85, 548
BsuTUI ATCGAT 2 cut(s) 797, 851
BtsCI GGATG 4 cut(s) 72, 694, 873, 1066
BtsIMutI CAGTG 3 cut(s) 297, 726, 1023
Cac8I GCNNGC 4 cut(s) 211, 504, 676, 756
CfoI GCGC 1 cut(s) 323
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 1 cut(s) 491
ClaI ATCGAT 2 cut(s) 797, 851
CseI GACGC 1 cut(s) 807
Csp6I GTAC 2 cut(s) 901, 1116
CviAII CATG 2 cut(s) 310, 917
CviQI GTAC 2 cut(s) 901, 1116
DdeI CTNAG 5 cut(s) 19, 123, 360, 535, 711
DinI GGCGCC 1 cut(s) 322
DpnI GATC 5 cut(s) 33, 718, 850, 1041, 1102
DpnII GATC 5 cut(s) 31, 716, 848, 1039, 1100
Eam1104I CTCTTC 4 cut(s) 190, 427, 806, 1074
EarI CTCTTC 4 cut(s) 190, 427, 806, 1074
Eco147I AGGCCT 1 cut(s) 85
Eco47I GGWCC 1 cut(s) 491
Eco57I CTGAAG 2 cut(s) 830, 931
Eco88I CYCGRG 1 cut(s) 395
Eco91I GGTNACC 1 cut(s) 602
EcoO65I GGTNACC 1 cut(s) 602
EcoRII CCWGG 1 cut(s) 442
EgeI GGCGCC 1 cut(s) 322
EheI GGCGCC 1 cut(s) 322
FaeI CATG 2 cut(s) 313, 920
FaiI YATR 8 cut(s) 150, 311, 335, 593, 659, 918, 968, 1113
FaqI GGGAC 1 cut(s) 115
FatI CATG 2 cut(s) 309, 916
FbaI TGATCA 2 cut(s) 31, 1039
Fnu4HI GCNGC 1 cut(s) 1091
FokI GGATG 4 cut(s) 79, 701, 880, 1073
Fsp4HI GCNGC 1 cut(s) 1091
FspBI CTAG 1 cut(s) 566
GlaI GCGC 1 cut(s) 322
GluI GCNGC 1 cut(s) 1091
GsuI CTGGAG 1 cut(s) 277
HaeII RGCGCY 1 cut(s) 324
HaeIII GGCC 2 cut(s) 85, 548
HapII CCGG 3 cut(s) 210, 324, 383
HgaI GACGC 1 cut(s) 807
HhaI GCGC 1 cut(s) 323
Hin1I GRCGYC 2 cut(s) 321, 818
Hin1II CATG 2 cut(s) 313, 920
Hin6I GCGC 1 cut(s) 321
HinP1I GCGC 1 cut(s) 321
HincII GTYRAC 1 cut(s) 72
HindII GTYRAC 1 cut(s) 72
HindIII AAGCTT 1 cut(s) 1130
HinfI GANTC 3 cut(s) 447, 803, 853
HpaII CCGG 3 cut(s) 210, 324, 383
HphI GGTGA 3 cut(s) 227, 614, 1076
Hpy166II GTNNAC 1 cut(s) 72
Hpy188I TCNGA 1 cut(s) 22
Hpy188III TCNNGA 6 cut(s) 407, 494, 743, 857, 896, 1051
Hpy8I GTNNAC 1 cut(s) 72
Hpy99I CGWCG 1 cut(s) 823
HpyAV CCTTC 4 cut(s) 118, 742, 854, 858
HpyCH4III ACNGT 2 cut(s) 341, 491
HpyCH4V TGCA 2 cut(s) 649, 871
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 206, 230, 545
HpyF3I CTNAG 5 cut(s) 19, 123, 360, 535, 711
Hsp92I GRCGYC 2 cut(s) 321, 818
Hsp92II CATG 2 cut(s) 313, 920
HspAI GCGC 1 cut(s) 321
KasI GGCGCC 1 cut(s) 320
KroI GCCGGC 1 cut(s) 209
KroNI GCCGGC 1 cut(s) 211
Ksp22I TGATCA 2 cut(s) 31, 1039
Kzo9I GATC 5 cut(s) 31, 716, 848, 1039, 1100
LguI GCTCTTC 1 cut(s) 190
LmnI GCTCC 2 cut(s) 751, 1000
Lsp1109I GCAGC 1 cut(s) 1077
LweI GCATC 3 cut(s) 148, 636, 858
MaeI CTAG 1 cut(s) 566
MaeIII GTNAC 1 cut(s) 602
MalI GATC 5 cut(s) 33, 718, 850, 1041, 1102
MboI GATC 5 cut(s) 31, 716, 848, 1039, 1100
MboII GAAGA 9 cut(s) 38, 207, 414, 569, 783, 823, 847, 1082, 1091
MflI RGATCY 1 cut(s) 1100
MhlI GDGCHC 4 cut(s) 271, 297, 481, 742
MluCI AATT 5 cut(s) 36, 303, 542, 1073, 1105
Mly113I GGCGCC 1 cut(s) 321
MmeI TCCRAC 3 cut(s) 954, 993, 1038
MroNI GCCGGC 1 cut(s) 209
MseI TTAA 4 cut(s) 633, 734, 1085, 1135
MspA1I CMGCKG 1 cut(s) 127
MspI CCGG 3 cut(s) 210, 324, 383
MspR9I CCNGG 1 cut(s) 444
MvaI CCWGG 1 cut(s) 444
MwoI GCNNNNNNNGC 4 cut(s) 124, 206, 230, 545
NaeI GCCGGC 1 cut(s) 211
NarI GGCGCC 1 cut(s) 321
NdeII GATC 5 cut(s) 31, 716, 848, 1039, 1100
NgoMIV GCCGGC 1 cut(s) 209
NlaIII CATG 2 cut(s) 313, 920
NlaIV GGNNCC 4 cut(s) 268, 322, 418, 1002
NmeAIII GCCGAG 1 cut(s) 67
NmuCI GTSAC 1 cut(s) 602
NspV TTCGAA 1 cut(s) 111
PceI AGGCCT 1 cut(s) 85
PciSI GCTCTTC 1 cut(s) 190
PdiI GCCGGC 1 cut(s) 211
PfeI GAWTC 3 cut(s) 447, 803, 853
PfoI TCCNGGA 1 cut(s) 442
PkrI GCNGC 1 cut(s) 1092
PluTI GGCGCC 1 cut(s) 324
PshBI ATTAAT 1 cut(s) 633
Psp6I CCWGG 1 cut(s) 442
PspEI GGTNACC 1 cut(s) 602
PspGI CCWGG 1 cut(s) 442
PspN4I GGNNCC 4 cut(s) 268, 322, 418, 1002
PspPI GGNCC 1 cut(s) 491
PsuI RGATCY 1 cut(s) 1100
PvuII CAGCTG 1 cut(s) 127
RsaI GTAC 2 cut(s) 902, 1117
RsaNI GTAC 2 cut(s) 901, 1116
SapI GCTCTTC 1 cut(s) 190
SaqAI TTAA 4 cut(s) 633, 734, 1085, 1135
SatI GCNGC 1 cut(s) 1091
Sau3AI GATC 5 cut(s) 31, 716, 848, 1039, 1100
Sau96I GGNCC 1 cut(s) 491
ScrFI CCNGG 1 cut(s) 444
SduI GDGCHC 4 cut(s) 271, 297, 481, 742
SfaNI GCATC 3 cut(s) 148, 636, 858
SfoI GGCGCC 1 cut(s) 322
SfuI TTCGAA 1 cut(s) 111
SinI GGWCC 1 cut(s) 491
SmlI CTYRAG 1 cut(s) 743
SmoI CTYRAG 1 cut(s) 743
Sse9I AATT 5 cut(s) 36, 303, 542, 1073, 1105
SseBI AGGCCT 1 cut(s) 85
SsiI CCGC 3 cut(s) 213, 224, 600
SspDI GGCGCC 1 cut(s) 320
SspI AATATT 2 cut(s) 619, 732
SspMI CTAG 1 cut(s) 566
StuI AGGCCT 1 cut(s) 85
StyD4I CCNGG 1 cut(s) 442
TaaI ACNGT 2 cut(s) 341, 491
TaqI TCGA 9 cut(s) 111, 368, 481, 572, 644, 797, 851, 856, 1052
TasI AATT 5 cut(s) 36, 303, 542, 1073, 1105
TatI WGTACW 1 cut(s) 900
TfiI GAWTC 3 cut(s) 447, 803, 853
Tru1I TTAA 4 cut(s) 633, 734, 1085, 1135
Tru9I TTAA 4 cut(s) 633, 734, 1085, 1135
TscAI CASTG 3 cut(s) 297, 726, 1030
TseFI GTSAC 1 cut(s) 602
TseI GCWGC 1 cut(s) 1090
Tsp45I GTSAC 1 cut(s) 602
TspDTI ATGAA 3 cut(s) 39, 783, 1083
TspRI CASTG 3 cut(s) 297, 726, 1030
VpaK11BI GGWCC 1 cut(s) 491
VspI ATTAAT 1 cut(s) 633
XapI RAATTY 1 cut(s) 36
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XspI CTAG 1 cut(s) 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.