pycom07g06680

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
5972539 .. 5978743
6205 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g06680.9

Sequence Viewer

Length: 1158 bp
ATGGCTTCTTCTATTACCTCTACCCCCCGCGAAGGAGATTCGGTTCTGGTACAGAAGAATTTGATTGCGAGGACATTGACATTGAACCGGCCTCGGCAGTTGAATGCCCTTAACTTTGATATGATTTCTCGTCTGTTGGAGCATTTTCTTGCCTTTGAGGATGATGCTAATGTCAAGTTGGTAATTGTCAAGGGGAAAGGAAGAGCCTTTTGTGCTGGTGGAGATGTAGCGGCTGTGGTTCGTCAGATTAATGAAGGAAATTGGAGATTAGCTGCTCATTTTTTTCAAAAGGAGTATACCTTGAATTATTTGCTGGCAACATACAGTAAACCCCAGGTTTCAATTCTGGACGGGATTGTCATGGGAGGTGGGGCTGGTGCTTCAATACATGGAAGATTCCGTGTTGCAACTGAGAATTCGGTTTTTGCAATGCCAGAAACTGCTTTGGGACTTTTTCCGGATGTTGGTGCCTCTTATTACTTGTCCAGGCTTCCTGGATTCTTCGGAGAATATGTTGGTCTTACAGGTACCAGATTGGATGGTGCTGAAATGCTTGCTTGCAGCCTTGCAACACACTTTGTTCCATCAACGAGATTGTCTTTGTTAGAAGAAGCTTTATACAAAGTTGATTCAAGTGATTTTGCCATTATTCAAGCAGTCATAGATAAATACTCGCAGAGTCCAGCTCTGAAGAAGAAAAGTGCATACTACTGGATGGATGTTATAGACAAGTGCTTTTCTAGAAGAACTGTAGAAGAAATTGTGTCTGCCCTTGAGGATGAGGAGGCTCCAAACGGAGTGGATGCTTGGCTAACTTCAACAATTCAAGCGTTAAAGAAGGCATCACCAATGAGTTTGAAGATTTCTTTGAGATCGATTAGAGAAGGAAGACTTCAGGGAGTTGGTCAGTGCCTTGTTCGTGAATATAGAATGGTTTCGCATGTTGTGAAAGGAGAAGTCAGCAAGGACTTCAGAGAGGGTTGCAGAGCTTTATTGCTGGACAAGGATAAGAACCCAAAGTGGGAGCCTTCCAATTTGGAGCTCGTCACAAACCATATGGTCGAGCAATACTTCTCTAAGTTGGATGATGAAGGATGGGAAGAATTAAAGCTCCCTGCAAGATCAAATTTGCCTGCAACTGCCATTGCCAAGCTTTGA

Protein Analysis

386

Amino Acids

42.7

Weight (kDa)

7.02

Isoelectric Point (pI)

30.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 356
Acc65I GGTACC 1 cut(s) 527
AccB1I GGYRCC 2 cut(s) 467, 527
AccI GTMKAC 1 cut(s) 296
AccII CGCG 1 cut(s) 30
AccIII TCCGGA 1 cut(s) 457
AciI CCGC 2 cut(s) 28, 230
AcsI RAATTY 3 cut(s) 58, 415, 1126
AcuI CTGAAG 3 cut(s) 710, 878, 955
AfaI GTAC 2 cut(s) 51, 529
AfiI CCNNNNNNNGG 3 cut(s) 32, 464, 1021
AjnI CCWGG 3 cut(s) 333, 485, 493
AloI GAACNNNNNNTCC 2 cut(s) 27, 59
AluBI AGCT 7 cut(s) 272, 614, 686, 989, 1042, 1111, 1153
AluI AGCT 7 cut(s) 272, 614, 686, 989, 1042, 1111, 1153
Alw21I GWGCWC 1 cut(s) 1044
AlwNI CAGNNNCTG 1 cut(s) 440
Aor13HI TCCGGA 1 cut(s) 457
AoxI GGCC 1 cut(s) 89
ApeKI GCWGC 2 cut(s) 272, 561
ApoI RAATTY 3 cut(s) 58, 415, 1126
AseI ATTAAT 1 cut(s) 249
Asp700I GAANNNNTTC 1 cut(s) 934
Asp718I GGTACC 1 cut(s) 527
AsuHPI GGTGA 1 cut(s) 837
BanI GGYRCC 2 cut(s) 467, 527
BanII GRGCYC 1 cut(s) 1044
BbsI GAAGAC 1 cut(s) 895
Bbv12I GWGCWC 1 cut(s) 1044
BbvI GCAGC 2 cut(s) 259, 573
BccI CCATC 4 cut(s) 533, 592, 709, 1089
BciT130I CCWGG 3 cut(s) 335, 487, 495
BfaI CTAG 1 cut(s) 741
BfmI CTRYAG 1 cut(s) 750
BisI GCNGC 3 cut(s) 231, 273, 562
BlsI GCNGC 3 cut(s) 232, 274, 563
Bme1390I CCNGG 3 cut(s) 335, 487, 495
BmiI GGNNCC 4 cut(s) 469, 529, 789, 1026
BmrFI CCNGG 3 cut(s) 335, 487, 495
BmsI GCATC 3 cut(s) 154, 793, 851
BpiI GAAGAC 1 cut(s) 895
BplI GAGNNNNNCTC 2 cut(s) 670, 702
BpuEI CTTGAG 1 cut(s) 794
Bsa29I ATCGAT 1 cut(s) 875
BsaJI CCNNGG 2 cut(s) 92, 333
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 4 cut(s) 27, 57, 498, 528
Bsc4I CCNNNNNNNGG 3 cut(s) 32, 464, 1021
Bse118I RCCGGY 1 cut(s) 87
Bse1I ACTGG 1 cut(s) 716
Bse3DI GCAATG 2 cut(s) 435, 1143
BseAI TCCGGA 1 cut(s) 457
BseBI CCWGG 3 cut(s) 335, 487, 495
BseCI ATCGAT 1 cut(s) 875
BseDI CCNNGG 2 cut(s) 92, 333
BseGI GGATG 9 cut(s) 166, 466, 544, 720, 724, 784, 808, 1090, 1100
BseLI CCNNNNNNNGG 3 cut(s) 32, 464, 1021
BseMI GCAATG 2 cut(s) 435, 1143
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 1 cut(s) 716
BseRI GAGGAG 1 cut(s) 797
BseXI GCAGC 2 cut(s) 259, 573
Bsh1236I CGCG 1 cut(s) 30
BshFI GGCC 1 cut(s) 91
BshNI GGYRCC 2 cut(s) 467, 527
BshVI ATCGAT 1 cut(s) 875
BsiHKAI GWGCWC 1 cut(s) 1044
BsiSI CCGG 2 cut(s) 88, 458
BslFI GGGAC 1 cut(s) 462
BslI CCNNNNNNNGG 3 cut(s) 32, 464, 1021
BsmFI GGGAC 1 cut(s) 462
BsmI GAATGC 1 cut(s) 109
BsnI GGCC 1 cut(s) 91
Bsp1286I GDGCHC 1 cut(s) 1044
Bsp13I TCCGGA 1 cut(s) 457
Bsp143I GATC 2 cut(s) 872, 1121
BspACI CCGC 2 cut(s) 28, 230
BspANI GGCC 1 cut(s) 91
BspCNI CTCAG 1 cut(s) 403
BspDI ATCGAT 1 cut(s) 875
BspEI TCCGGA 1 cut(s) 457
BspFNI CGCG 1 cut(s) 30
BspLI GGNNCC 4 cut(s) 469, 529, 789, 1026
BspQI GCTCTTC 1 cut(s) 196
BspT107I GGYRCC 2 cut(s) 467, 527
BsrDI GCAATG 2 cut(s) 435, 1143
BsrFI RCCGGY 1 cut(s) 87
BsrI ACTGG 1 cut(s) 716
BssAI RCCGGY 1 cut(s) 87
BssECI CCNNGG 2 cut(s) 92, 333
BssMI GATC 2 cut(s) 872, 1121
BssNAI GTATAC 1 cut(s) 297
Bst1107I GTATAC 1 cut(s) 297
Bst2UI CCWGG 3 cut(s) 335, 487, 495
Bst4CI ACNGT 2 cut(s) 326, 751
Bst6I CTCTTC 1 cut(s) 196
BstC8I GCNNGC 4 cut(s) 315, 555, 559, 1134
BstDEI CTNAG 2 cut(s) 411, 1077
BstF5I GGATG 9 cut(s) 166, 466, 544, 720, 724, 784, 808, 1090, 1100
BstFNI CGCG 1 cut(s) 30
BstKTI GATC 2 cut(s) 875, 1124
BstMBI GATC 2 cut(s) 872, 1121
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstNI CCWGG 3 cut(s) 335, 487, 495
BstNSI RCATGY 1 cut(s) 944
BstSCI CCNGG 3 cut(s) 333, 485, 493
BstSFI CTRYAG 1 cut(s) 750
BstUI CGCG 1 cut(s) 30
BstV1I GCAGC 2 cut(s) 259, 573
BstV2I GAAGAC 1 cut(s) 895
BstZ17I GTATAC 1 cut(s) 297
Bsu15I ATCGAT 1 cut(s) 875
BsuRI GGCC 1 cut(s) 91
BsuTUI ATCGAT 1 cut(s) 875
BtsCI GGATG 9 cut(s) 166, 466, 544, 720, 724, 784, 808, 1090, 1100
BtsIMutI CAGTG 1 cut(s) 914
Cac8I GCNNGC 4 cut(s) 315, 555, 559, 1134
CaiI CAGNNNCTG 1 cut(s) 440
Cfr10I RCCGGY 1 cut(s) 87
ClaI ATCGAT 1 cut(s) 875
Csp6I GTAC 2 cut(s) 50, 528
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviAII CATG 3 cut(s) 361, 389, 941
CviQI GTAC 2 cut(s) 50, 528
DdeI CTNAG 2 cut(s) 411, 1077
DpnI GATC 2 cut(s) 874, 1123
DpnII GATC 2 cut(s) 872, 1121
DrdI GACNNNNNNGTC 1 cut(s) 356
DseDI GACNNNNNNGTC 1 cut(s) 356
Eam1104I CTCTTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 196
Ecl136II GAGCTC 1 cut(s) 1042
Eco24I GRGCYC 1 cut(s) 1044
Eco53kI GAGCTC 1 cut(s) 1042
Eco57I CTGAAG 3 cut(s) 710, 878, 955
EcoICRI GAGCTC 1 cut(s) 1042
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 3 cut(s) 333, 485, 493
EcoT38I GRGCYC 1 cut(s) 1044
FaeI CATG 3 cut(s) 364, 392, 944
FalI AAGNNNNNCTT 2 cut(s) 876, 908
FaqI GGGAC 1 cut(s) 462
FatI CATG 3 cut(s) 360, 388, 940
FauI CCCGC 1 cut(s) 35
FauNDI CATATG 1 cut(s) 1056
FblI GTMKAC 1 cut(s) 296
Fnu4HI GCNGC 3 cut(s) 231, 273, 562
FokI GGATG 9 cut(s) 173, 473, 551, 727, 731, 791, 815, 1097, 1107
FriOI GRGCYC 1 cut(s) 1044
Fsp4HI GCNGC 3 cut(s) 231, 273, 562
FspBI CTAG 1 cut(s) 741
GluI GCNGC 3 cut(s) 231, 273, 562
HaeIII GGCC 1 cut(s) 91
HapII CCGG 2 cut(s) 88, 458
Hin1II CATG 3 cut(s) 364, 392, 944
HindIII AAGCTT 2 cut(s) 612, 1151
HinfI GANTC 5 cut(s) 38, 396, 498, 629, 679
HpaII CCGG 2 cut(s) 88, 458
HphI GGTGA 1 cut(s) 837
Hpy166II GTNNAC 2 cut(s) 297, 329
Hpy188I TCNGA 4 cut(s) 246, 506, 690, 974
Hpy188III TCNNGA 4 cut(s) 347, 458, 741, 920
Hpy8I GTNNAC 2 cut(s) 297, 329
HpyAV CCTTC 6 cut(s) 26, 248, 832, 878, 1038, 1085
HpyCH4III ACNGT 2 cut(s) 326, 751
HpyCH4V TGCA 8 cut(s) 407, 428, 561, 569, 704, 984, 1118, 1136
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 2 cut(s) 411, 1077
Hsp92II CATG 3 cut(s) 364, 392, 944
Kpn2I TCCGGA 1 cut(s) 457
KpnI GGTACC 1 cut(s) 531
Kzo9I GATC 2 cut(s) 872, 1121
LguI GCTCTTC 1 cut(s) 196
LmnI GCTCC 5 cut(s) 139, 793, 1024, 1039, 1116
Lsp1109I GCAGC 2 cut(s) 259, 573
LweI GCATC 3 cut(s) 154, 793, 851
MaeI CTAG 1 cut(s) 741
MaeIII GTNAC 1 cut(s) 1045
MalI GATC 2 cut(s) 874, 1123
MboI GATC 2 cut(s) 872, 1121
MhlI GDGCHC 1 cut(s) 1044
MlyI GAGTC 1 cut(s) 688
MmeI TCCRAC 2 cut(s) 117, 1062
MroI TCCGGA 1 cut(s) 457
MroXI GAANNNNTTC 1 cut(s) 934
MseI TTAA 4 cut(s) 111, 249, 833, 1106
MspI CCGG 2 cut(s) 88, 458
MspR9I CCNGG 3 cut(s) 335, 487, 495
Mva1269I GAATGC 1 cut(s) 109
MvaI CCWGG 3 cut(s) 335, 487, 495
MvnI CGCG 1 cut(s) 30
MwoI GCNNNNNNNGC 1 cut(s) 212
NdeI CATATG 1 cut(s) 1056
NdeII GATC 2 cut(s) 872, 1121
NlaIII CATG 3 cut(s) 364, 392, 944
NlaIV GGNNCC 4 cut(s) 469, 529, 789, 1026
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 1 cut(s) 1045
NspI RCATGY 1 cut(s) 944
PciSI GCTCTTC 1 cut(s) 196
PctI GAATGC 1 cut(s) 109
PdmI GAANNNNTTC 1 cut(s) 934
PfeI GAWTC 4 cut(s) 38, 396, 498, 629
PfoI TCCNGGA 1 cut(s) 493
PkrI GCNGC 3 cut(s) 232, 274, 563
PleI GAGTC 1 cut(s) 687
PpsI GAGTC 1 cut(s) 687
PshBI ATTAAT 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 1044
Psp6I CCWGG 3 cut(s) 333, 485, 493
PspGI CCWGG 3 cut(s) 333, 485, 493
PspN4I GGNNCC 4 cut(s) 469, 529, 789, 1026
PstNI CAGNNNCTG 1 cut(s) 440
RsaI GTAC 2 cut(s) 51, 529
RsaNI GTAC 2 cut(s) 50, 528
SacI GAGCTC 1 cut(s) 1044
SapI GCTCTTC 1 cut(s) 196
SaqAI TTAA 4 cut(s) 111, 249, 833, 1106
SatI GCNGC 3 cut(s) 231, 273, 562
Sau3AI GATC 2 cut(s) 872, 1121
SchI GAGTC 1 cut(s) 688
ScrFI CCNGG 3 cut(s) 335, 487, 495
SduI GDGCHC 1 cut(s) 1044
SfaNI GCATC 3 cut(s) 154, 793, 851
SfcI CTRYAG 1 cut(s) 750
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
SsiI CCGC 2 cut(s) 28, 230
SspMI CTAG 1 cut(s) 741
SstI GAGCTC 1 cut(s) 1044
StyD4I CCNGG 3 cut(s) 333, 485, 493
TaaI ACNGT 2 cut(s) 326, 751
TaqI TCGA 2 cut(s) 875, 1062
TauI GCSGC 1 cut(s) 233
TfiI GAWTC 4 cut(s) 38, 396, 498, 629
Tru1I TTAA 4 cut(s) 111, 249, 833, 1106
Tru9I TTAA 4 cut(s) 111, 249, 833, 1106
TscAI CASTG 1 cut(s) 914
TseFI GTSAC 1 cut(s) 1045
TseI GCWGC 2 cut(s) 272, 561
Tsp45I GTSAC 1 cut(s) 1045
TspDTI ATGAA 2 cut(s) 267, 1104
TspGWI ACGGA 2 cut(s) 389, 810
TspRI CASTG 1 cut(s) 914
VspI ATTAAT 1 cut(s) 249
XapI RAATTY 3 cut(s) 58, 415, 1126
XbaI TCTAGA 1 cut(s) 740
XceI RCATGY 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 296
XmnI GAANNNNTTC 1 cut(s) 934
XspI CTAG 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.