FvH4_7g18470

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
15423084 .. 15425895
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18470.t1

Sequence Viewer

Length: 1065 bp
ATGATGTCTCGGCTGTGCCAACTGTTCCACGCCTACGAGGACGACGCCAATGTCAAGCTGGTCATTCTCAAAGGCAAAGGAAGAGCATTCTGCGCCGGCGGCGATGTGGTGGTGGTGGCTCGTCATCTTTTCGAAGGCAACTGGAGATTTGGAGCGCGACAAGGTAAGAGGGTGTATACCCTAGGCTACTTGATAGCAAAAAACACTACGCCCCAGGTTTCATTTCTCAATGGAATTGTCATGGGAGGTGGCGCCGGAGTTTCTATACACGGCAGGTTTCGTGTAGCAACTGAGAACTCGGTGTTTGCTTTGCCGGAAACAGCTCTGGGATTGTTTCCCGATTTGGGTGCTTCTTATTTTCTGTCAAGGCTTCCTGGATTCTTTGGAGAATATCTTGGTCTTACTGGTGCTAGATTGGACGGTCCTGAAATGCTCGCTTGTGGTTTAGCAACTCACTTTGTTCCCTCAGCCAAATTAGCCTCGTTAGAAGAAGCCCTAGTTGCTTCCACAAATATATCGAGCAGTGATCTTGTTGATAATATTTCAGCCATTATTAATGAATACTCACAGCAACCAGCTGTGAAAGAGAAGAGCGTTTGTCACAGAATAGATGTTATTGACAAGTGCTTTTCTAAGAGCACAGTGGAGGAAATTTTAAGTTCTCTTGAGAAGGAGCTTGCTACAACTGGTATACATGATCGTGATCACTGGTTGTCTTCATCGATTGCATCCCTGAAAAAGGCGTCACCGATAAGTTTGAAGATCACATTGAGATCGATTCGAGAAGGAAGGATGCAAGGAGTTGGCGAGTGCCTTGTTCGTGAGCAAAGAATGGTTTGCCATGTTGTGAGAGGGGAGATCAGTAAGGACTTTGGGGAGGGTTGTAGAGCGATATTGTTGGACAAGGATAAGAACCCGAAATGGGAGCCTTCTAAGTTGGAGCATATCACTGACGAGATGGTTGATCGCTACTTCTCTAAGTTGGATAGTGATGATGAAGAATTGGAAGAGTTGAAGCTTCCTGAAAGATCCAATTTGTATGGTTCTGCTATTGCCAAGCTTTAA

Protein Analysis

355

Amino Acids

38.95

Weight (kDa)

6.34

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 1 - 325 1.4e-108 Enoyl-CoA hydratase/isomerase
ECH_1 PF00378 2 - 224 1.6e-24 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 50
Acc36I ACCTGC 1 cut(s) 264
AccB1I GGYRCC 1 cut(s) 251
AccI GTMKAC 2 cut(s) 176, 691
AccII CGCG 1 cut(s) 157
AciI CCGC 1 cut(s) 99
AclWI GGATC 1 cut(s) 1023
AcsI RAATTY 1 cut(s) 651
AcyI GRCGYC 3 cut(s) 45, 252, 743
AfiI CCNNNNNNNGG 3 cut(s) 344, 739, 922
AgsI TTSAA 2 cut(s) 760, 1015
AjnI CCWGG 2 cut(s) 213, 373
AluBI AGCT 6 cut(s) 58, 323, 578, 676, 1018, 1060
AluI AGCT 6 cut(s) 58, 323, 578, 676, 1018, 1060
Alw21I GWGCWC 1 cut(s) 641
Alw26I GTCTC 1 cut(s) 12
AlwI GGATC 1 cut(s) 1023
ApoI RAATTY 1 cut(s) 651
AseI ATTAAT 1 cut(s) 555
AspA2I CCTAGG 1 cut(s) 181
AspLEI GCGC 3 cut(s) 95, 157, 254
AspS9I GGNCC 1 cut(s) 422
AsuHPI GGTGA 1 cut(s) 738
AsuII TTCGAA 1 cut(s) 132
AvaII GGWCC 1 cut(s) 422
AvrII CCTAGG 1 cut(s) 181
BanI GGYRCC 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 708
Bbv12I GWGCWC 1 cut(s) 641
BbvCI CCTCAGC 1 cut(s) 466
BccI CCATC 1 cut(s) 952
BceAI ACGGC 1 cut(s) 286
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 2 cut(s) 215, 375
BclI TGATCA 1 cut(s) 703
BcoDI GTCTC 1 cut(s) 12
BfaI CTAG 3 cut(s) 182, 411, 497
BfoI RGCGCY 1 cut(s) 255
BfuAI ACCTGC 1 cut(s) 264
BisI GCNGC 1 cut(s) 100
BlnI CCTAGG 1 cut(s) 181
BlsI GCNGC 1 cut(s) 101
Bme1390I CCNGG 2 cut(s) 215, 375
Bme18I GGWCC 1 cut(s) 422
BmgT120I GGNCC 1 cut(s) 422
BmiI GGNNCC 2 cut(s) 253, 927
BmrFI CCNGG 2 cut(s) 215, 375
BmsI GCATC 2 cut(s) 737, 783
BpiI GAAGAC 1 cut(s) 708
BpmI CTGGAG 1 cut(s) 163
Bpu10I CCTNAGC 1 cut(s) 466
Bpu14I TTCGAA 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 686
Bsa29I ATCGAT 2 cut(s) 722, 776
BsaBI GATNNNNATC 1 cut(s) 702
BsaHI GRCGYC 3 cut(s) 45, 252, 743
BsaJI CCNNGG 2 cut(s) 181, 213
Bsc4I CCNNNNNNNGG 3 cut(s) 344, 739, 922
Bse118I RCCGGY 1 cut(s) 95
Bse1I ACTGG 4 cut(s) 146, 409, 691, 713
Bse8I GATNNNNATC 1 cut(s) 702
BseBI CCWGG 2 cut(s) 215, 375
BseCI ATCGAT 2 cut(s) 722, 776
BseDI CCNNGG 2 cut(s) 181, 213
BseGI GGATG 2 cut(s) 728, 798
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 3 cut(s) 344, 739, 922
BseMII CTCAG 2 cut(s) 282, 480
BseNI ACTGG 4 cut(s) 146, 409, 691, 713
Bsh1236I CGCG 1 cut(s) 157
BshNI GGYRCC 1 cut(s) 251
BshVI ATCGAT 2 cut(s) 722, 776
BsiHKAI GWGCWC 1 cut(s) 641
BsiSI CCGG 3 cut(s) 96, 255, 314
BslI CCNNNNNNNGG 3 cut(s) 344, 739, 922
BsmAI GTCTC 1 cut(s) 12
BsmI GAATGC 1 cut(s) 86
Bsp119I TTCGAA 1 cut(s) 132
Bsp1286I GDGCHC 1 cut(s) 641
Bsp143I GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
BspACI CCGC 1 cut(s) 99
BspCNI CTCAG 2 cut(s) 283, 479
BspDI ATCGAT 2 cut(s) 722, 776
BspFNI CGCG 1 cut(s) 157
BspLI GGNNCC 2 cut(s) 253, 927
BspMI ACCTGC 1 cut(s) 264
BspPI GGATC 1 cut(s) 1023
BspQI GCTCTTC 2 cut(s) 76, 584
BspT104I TTCGAA 1 cut(s) 132
BspT107I GGYRCC 1 cut(s) 251
BsrFI RCCGGY 1 cut(s) 95
BsrI ACTGG 4 cut(s) 146, 409, 691, 713
BssAI RCCGGY 1 cut(s) 95
BssECI CCNNGG 2 cut(s) 181, 213
BssMI GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
BssNAI GTATAC 2 cut(s) 177, 692
BssNI GRCGYC 3 cut(s) 45, 252, 743
BssT1I CCWWGG 1 cut(s) 181
Bst1107I GTATAC 2 cut(s) 177, 692
Bst2UI CCWGG 2 cut(s) 215, 375
Bst4CI ACNGT 3 cut(s) 24, 422, 643
Bst6I CTCTTC 3 cut(s) 76, 584, 1002
BstACI GRCGYC 3 cut(s) 45, 252, 743
BstBI TTCGAA 1 cut(s) 132
BstC8I GCNNGC 3 cut(s) 97, 435, 678
BstDEI CTNAG 5 cut(s) 291, 466, 633, 933, 978
BstENI CCTNNNNNAGG 1 cut(s) 737
BstF5I GGATG 2 cut(s) 728, 798
BstFNI CGCG 1 cut(s) 157
BstH2I RGCGCY 1 cut(s) 255
BstHHI GCGC 3 cut(s) 95, 157, 254
BstKTI GATC 8 cut(s) 529, 700, 706, 765, 776, 861, 967, 1031
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
BstMWI GCNNNNNNNGC 4 cut(s) 92, 99, 476, 500
BstNI CCWGG 2 cut(s) 215, 375
BstSCI CCNGG 2 cut(s) 213, 373
BstUI CGCG 1 cut(s) 157
BstV2I GAAGAC 1 cut(s) 708
BstX2I RGATCY 1 cut(s) 1028
BstYI RGATCY 1 cut(s) 1028
BstZ17I GTATAC 2 cut(s) 177, 692
Bsu15I ATCGAT 2 cut(s) 722, 776
BsuTUI ATCGAT 2 cut(s) 722, 776
BtgZI GCGATG 1 cut(s) 117
BtsCI GGATG 2 cut(s) 728, 798
BtsI GCAGTG 1 cut(s) 529
BtsIMutI CAGTG 4 cut(s) 529, 648, 706, 948
BveI ACCTGC 1 cut(s) 264
Cac8I GCNNGC 3 cut(s) 97, 435, 678
CfoI GCGC 3 cut(s) 95, 157, 254
Cfr10I RCCGGY 1 cut(s) 95
Cfr13I GGNCC 1 cut(s) 422
ClaI ATCGAT 2 cut(s) 722, 776
CseI GACGC 2 cut(s) 53, 732
CviAII CATG 3 cut(s) 241, 695, 842
DdeI CTNAG 5 cut(s) 291, 466, 633, 933, 978
DinI GGCGCC 1 cut(s) 253
DpnI GATC 8 cut(s) 528, 699, 705, 764, 775, 860, 966, 1030
DpnII GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
DrdI GACNNNNNNGTC 1 cut(s) 50
DseDI GACNNNNNNGTC 1 cut(s) 50
Eam1104I CTCTTC 3 cut(s) 76, 584, 1002
EarI CTCTTC 3 cut(s) 76, 584, 1002
Eco130I CCWWGG 1 cut(s) 181
Eco47I GGWCC 1 cut(s) 422
EcoNI CCTNNNNNAGG 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 213, 373
EcoT14I CCWWGG 1 cut(s) 181
EgeI GGCGCC 1 cut(s) 253
EheI GGCGCC 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 181
FaeI CATG 3 cut(s) 244, 698, 845
FaiI YATR 9 cut(s) 177, 242, 266, 515, 692, 696, 843, 945, 1041
FatI CATG 3 cut(s) 240, 694, 841
FbaI TGATCA 1 cut(s) 703
FblI GTMKAC 2 cut(s) 176, 691
Fnu4HI GCNGC 1 cut(s) 100
FokI GGATG 2 cut(s) 715, 805
Fsp4HI GCNGC 1 cut(s) 100
FspBI CTAG 3 cut(s) 182, 411, 497
GlaI GCGC 3 cut(s) 94, 156, 253
GluI GCNGC 1 cut(s) 100
GsuI CTGGAG 1 cut(s) 163
HaeII RGCGCY 1 cut(s) 255
HapII CCGG 3 cut(s) 96, 255, 314
HgaI GACGC 2 cut(s) 53, 732
HhaI GCGC 3 cut(s) 95, 157, 254
Hin1I GRCGYC 3 cut(s) 45, 252, 743
Hin1II CATG 3 cut(s) 244, 698, 845
Hin6I GCGC 3 cut(s) 93, 155, 252
HinP1I GCGC 3 cut(s) 93, 155, 252
HindIII AAGCTT 2 cut(s) 1016, 1058
HinfI GANTC 2 cut(s) 378, 778
HpaII CCGG 3 cut(s) 96, 255, 314
HphI GGTGA 1 cut(s) 738
Hpy166II GTNNAC 2 cut(s) 177, 692
Hpy188III TCNNGA 7 cut(s) 338, 425, 665, 701, 782, 821, 1022
Hpy8I GTNNAC 2 cut(s) 177, 692
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 5 cut(s) 128, 664, 779, 783, 939
HpyCH4III ACNGT 3 cut(s) 24, 422, 643
HpyCH4V TGCA 2 cut(s) 728, 796
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 99, 476, 500
HpyF3I CTNAG 5 cut(s) 291, 466, 633, 933, 978
Hsp92I GRCGYC 3 cut(s) 45, 252, 743
Hsp92II CATG 3 cut(s) 244, 698, 845
HspAI GCGC 3 cut(s) 93, 155, 252
KasI GGCGCC 1 cut(s) 251
KroI GCCGGC 1 cut(s) 95
KroNI GCCGGC 1 cut(s) 97
Ksp22I TGATCA 1 cut(s) 703
Kzo9I GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
LguI GCTCTTC 2 cut(s) 76, 584
LmnI GCTCC 4 cut(s) 152, 673, 925, 940
LweI GCATC 2 cut(s) 737, 783
MaeI CTAG 3 cut(s) 182, 411, 497
MaeIII GTNAC 2 cut(s) 599, 744
MalI GATC 8 cut(s) 528, 699, 705, 764, 775, 860, 966, 1030
MboI GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
MboII GAAGA 7 cut(s) 93, 500, 601, 708, 772, 1010, 1019
MflI RGATCY 1 cut(s) 1028
MhlI GDGCHC 1 cut(s) 641
MluCI AATT 5 cut(s) 234, 473, 651, 1001, 1033
Mly113I GGCGCC 1 cut(s) 252
MmeI TCCRAC 3 cut(s) 879, 918, 963
MnlI CCTC 8 cut(s) 31, 162, 239, 475, 490, 640, 845, 871
MreI CGCCGGCG 1 cut(s) 95
MroNI GCCGGC 1 cut(s) 95
MseI TTAA 3 cut(s) 555, 656, 1063
MslI CAYNNNNRTG 1 cut(s) 699
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 3 cut(s) 96, 255, 314
MspR9I CCNGG 2 cut(s) 215, 375
Mva1269I GAATGC 1 cut(s) 86
MvaI CCWGG 2 cut(s) 215, 375
MvnI CGCG 1 cut(s) 157
MwoI GCNNNNNNNGC 4 cut(s) 92, 99, 476, 500
NaeI GCCGGC 1 cut(s) 97
NarI GGCGCC 1 cut(s) 252
NdeII GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
NgoMIV GCCGGC 1 cut(s) 95
NlaIII CATG 3 cut(s) 244, 698, 845
NlaIV GGNNCC 2 cut(s) 253, 927
NmuCI GTSAC 2 cut(s) 599, 744
NspV TTCGAA 1 cut(s) 132
PciSI GCTCTTC 2 cut(s) 76, 584
PctI GAATGC 1 cut(s) 86
PdiI GCCGGC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 378, 778
PfoI TCCNGGA 1 cut(s) 373
PkrI GCNGC 1 cut(s) 101
PluTI GGCGCC 1 cut(s) 255
PshBI ATTAAT 1 cut(s) 555
Psp6I CCWGG 2 cut(s) 213, 373
PspGI CCWGG 2 cut(s) 213, 373
PspN4I GGNNCC 2 cut(s) 253, 927
PspPI GGNCC 1 cut(s) 422
PsuI RGATCY 1 cut(s) 1028
PvuII CAGCTG 1 cut(s) 578
RseI CAYNNNNRTG 1 cut(s) 699
SapI GCTCTTC 2 cut(s) 76, 584
SaqAI TTAA 3 cut(s) 555, 656, 1063
SatI GCNGC 1 cut(s) 100
Sau3AI GATC 8 cut(s) 526, 697, 703, 762, 773, 858, 964, 1028
Sau96I GGNCC 1 cut(s) 422
ScrFI CCNGG 2 cut(s) 215, 375
SduI GDGCHC 1 cut(s) 641
SfaNI GCATC 2 cut(s) 737, 783
SfoI GGCGCC 1 cut(s) 253
SfuI TTCGAA 1 cut(s) 132
SgrAI CRCCGGYG 1 cut(s) 95
SinI GGWCC 1 cut(s) 422
SmiMI CAYNNNNRTG 1 cut(s) 699
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
Sse9I AATT 5 cut(s) 234, 473, 651, 1001, 1033
SsiI CCGC 1 cut(s) 99
SspDI GGCGCC 1 cut(s) 251
SspI AATATT 1 cut(s) 541
SspMI CTAG 3 cut(s) 182, 411, 497
StyD4I CCNGG 2 cut(s) 213, 373
StyI CCWWGG 1 cut(s) 181
TaaI ACNGT 3 cut(s) 24, 422, 643
TaqI TCGA 5 cut(s) 132, 518, 722, 776, 781
TasI AATT 5 cut(s) 234, 473, 651, 1001, 1033
TauI GCSGC 1 cut(s) 102
TfiI GAWTC 2 cut(s) 378, 778
Tru1I TTAA 3 cut(s) 555, 656, 1063
Tru9I TTAA 3 cut(s) 555, 656, 1063
TscAI CASTG 4 cut(s) 529, 648, 713, 955
TseFI GTSAC 2 cut(s) 599, 744
Tsp45I GTSAC 2 cut(s) 599, 744
TspDTI ATGAA 4 cut(s) 210, 573, 708, 1011
TspRI CASTG 4 cut(s) 529, 648, 713, 955
VpaK11BI GGWCC 1 cut(s) 422
VspI ATTAAT 1 cut(s) 555
XagI CCTNNNNNAGG 1 cut(s) 737
XapI RAATTY 1 cut(s) 651
XcmI CCANNNNNNNNNTGG 1 cut(s) 55
XmaJI CCTAGG 1 cut(s) 181
XmiI GTMKAC 2 cut(s) 176, 691
XspI CTAG 3 cut(s) 182, 411, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.