FvH4_7g08010

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
7927381 .. 7935914
8534 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08010.t2

Sequence Viewer

Length: 1155 bp
ATGGCTTCTCTCAACTCAAGCCCACGCGATGACGATTCGGTGGTTTTGGTACAAGAGGATTTCTGTGCCAGGATTATGACACTGAACAGGACTCGGCAATTGAATGCCCTTAACTTTGAAATGATTTCTCGACTCTTGGAATTTTTCTTTGCATACGAGGAGGATGCTAATGTCAAGTTGGTGATTCTCAAGGGAAAAGGAAGAGCATTTTGTGCGGGTGGTGATGTAGCGGCTGTGGTTCATGATATTAATGAAGGAAATTGGAGATCAGGTGCACATTTTTTCCGAAAGGAGTTTACCTTAAACTACTTAATGGCAACATACAGTAAACCACAGGTTTCACTTCTGAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCCGTCCATGGTAGATTCCGTGTTGCAACTGAGAATACGGTTTTTGCAATGCCAGAAACAGCTCTGGGACTTTTTCCGGATGTAGGTGCCTCTTATTATTTGTCCAGGCTTCCTGGATTCTTTGGAGAATATGTTGGTCTTACGGGTGCCAGATTGGATGGTGCTGAAATGCTCGCTTGTGGTCTAGCCACTCACTTTGTTCCTTCAACTAGTCTGCCTTTGCTAGAAGCAGCACTATGCAAAGTAGATTCAAGTGTGTTTGCAACTATTCAAGCTATTTTGGATCAATACTCACAGCATCCAGCTCTAAAAGAGAAAAGTGCTTATCACCGGATGGATATTATTGACAAGTGCTTTTCTAGAAGAACAGTTGAAGGAATTTTATCTGCCCTTGAGGAGGAGGCTGCAAAGAGGGCAGATGGTTGGTTATCAACAACAATTCAATCTCTAAAAAAAGCATCACCAATGAGTTTGAAGATTTCTTTAAGATCAATTAGGGAAGGAAGGCTTCAGGGAGTCGGTCAATGCCTTGTTCGTGAATATAGAATGGTTTCTCATGTTTTGCGAGGAGAAGTCAGCAAGGATTTCAGAGAGGGTTGCAGAGCTATATTGTTGGACAAGGATAGAAACCCAAAGTGGGAGCCTTCTAAATTGGAGCTCATCAATGATAATATGGTTGATCAGTATTTCTCTAAGTTGGATGATGAAGAATGGGAAGAGTTAAAGCTCCCTGCAAGATCCAACTTGCCTGTAACTGCCATTGCGAAGCTTTGA

Protein Analysis

385

Amino Acids

42.69

Weight (kDa)

6.42

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 1 - 332 1.8e-127 Enoyl-CoA hydratase/isomerase
ECH_1 PF00378 1 - 175 1.6e-26 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000464)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30650 AT2G30650 AT2G30660 AT2G30660 AT5G65940 AT5G65940 AT5G65940 AT5G65940
fragaria_vesca FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g08010 FvH4_7g09160 FvH4_7g15030 FvH4_7g18470
malus_domestica MD00G1098500.v1.1 MD02G1229900.v1.1 MD07G1169300.v1.1 MD07G1169400.v1.1
prunus_persica Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G109100_v2.0.a1 Prupe.2G207200_v2.0.a1 Prupe.2G207400_v2.0.a1 Prupe.2G207600_v2.0.a1 Prupe.2G207700_v2.0.a1 Prupe.2G207800_v2.0.a1
pyrus_communis pycom02g19850 pycom07g06680 pycom07g16310
rosa_chinensis RchiOBHm_Chr1g0341301 RchiOBHm_Chr1g0345221 RchiOBHm_Chr1g0357091 RchiOBHm_Chr1g0357121 RchiOBHm_Chr1g0357151
rosa_laevigata RLG00000027659 RLG00000028049 RLG00000028052 RLG00000029082 RLG00000029626
rosa_multiflora Rmu_sc0000117.1_g000042 Rmu_sc0000166.1_g000050 Rmu_sc0004092.1_g000048 Rmu_sc0005967.1_g000013 Rmu_sc0006896.1_g000007 Rmu_sc0011699.1_g000007 Rmu_sc0013980.1_g000002 Rmu_sc0021527.1_g000001 Rmu_sc0024834.1_g000001 Rmu_ssc0000009.1_g000009
rosa_roxburghii Rroxscaffold_4G00294310 Rroxscaffold_4G00299050 Rroxscaffold_4G00311940
rosa_rugosa Rorug01G0157800.1 Rorug01G0254200 Rorug01G0254300.1 Rorug01G0296600.1 Rorug01G0296800 Rorug01G0296900 Rorug06G0065700
rosa_samantha Rh1AG129700 Rh1AG162000 Rh1AG172400 Rh1AG268500 Rh1AG268600 Rh1AG305700 Rh1BG140400 Rh1BG236100 Rh1BG236200 Rh1BG269000 Rh1BG269100 Rh1CG123500 Rh1CG151300 Rh1CG160500 Rh1CG252100 Rh1CG252300 Rh1CG286900 Rh1DG172700 Rh1DG263300 Rh1DG263400 Rh1DG299000 Rh1DG299100
rosa_wichuraiana Rw0G018900 Rw0G022950 Rw1G013330 Rw1G014380 Rw1G023680 Rw1G023700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 467, 527
AccII CGCG 1 cut(s) 27
AccIII TCCGGA 1 cut(s) 457
AciI CCGC 2 cut(s) 215, 230
AclWI GGATC 2 cut(s) 672, 1113
AcsI RAATTY 2 cut(s) 140, 759
AcuI CTGAAG 1 cut(s) 875
AfaI GTAC 1 cut(s) 51
AfiI CCNNNNNNNGG 3 cut(s) 464, 778, 1018
AgsI TTSAA 8 cut(s) 103, 119, 588, 633, 653, 755, 824, 856
AhlI ACTAGT 1 cut(s) 590
AjnI CCWGG 3 cut(s) 68, 485, 493
AluBI AGCT 7 cut(s) 443, 656, 686, 986, 1039, 1108, 1150
AluI AGCT 7 cut(s) 443, 656, 686, 986, 1039, 1108, 1150
Alw21I GWGCWC 2 cut(s) 277, 1041
Alw44I GTGCAC 1 cut(s) 273
AlwI GGATC 2 cut(s) 672, 1113
Aor13HI TCCGGA 1 cut(s) 457
ApaLI GTGCAC 1 cut(s) 273
ApeKI GCWGC 2 cut(s) 611, 785
ApoI RAATTY 2 cut(s) 140, 759
AseI ATTAAT 1 cut(s) 249
Asp700I GAANNNNTTC 1 cut(s) 931
AsuHPI GGTGA 4 cut(s) 193, 233, 701, 834
BaeGI GKGCMC 1 cut(s) 277
BanI GGYRCC 2 cut(s) 467, 527
BanII GRGCYC 1 cut(s) 1041
Bbv12I GWGCWC 2 cut(s) 277, 1041
BbvI GCAGC 2 cut(s) 623, 772
BccI CCATC 3 cut(s) 533, 709, 794
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BciT130I CCWGG 3 cut(s) 70, 487, 495
BclI TGATCA 1 cut(s) 1060
BcuI ACTAGT 1 cut(s) 590
BfaI CTAG 4 cut(s) 566, 591, 605, 741
BisI GCNGC 3 cut(s) 231, 612, 786
BlsI GCNGC 3 cut(s) 232, 613, 787
Bme1390I CCNGG 3 cut(s) 70, 487, 495
BmiI GGNNCC 3 cut(s) 469, 529, 1023
BmrFI CCNGG 3 cut(s) 70, 487, 495
BmsI GCATC 3 cut(s) 154, 688, 848
BpuEI CTTGAG 2 cut(s) 173, 794
BsaJI CCNNGG 1 cut(s) 388
BsaWI WCCGGW 2 cut(s) 457, 711
BsaXI ACNNNNNCTCC 4 cut(s) 256, 286, 498, 528
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 778, 1018
Bse3DI GCAATG 2 cut(s) 435, 1140
BseAI TCCGGA 1 cut(s) 457
BseBI CCWGG 3 cut(s) 70, 487, 495
BseDI CCNNGG 1 cut(s) 388
BseGI GGATG 6 cut(s) 169, 466, 544, 679, 720, 1087
BseLI CCNNNNNNNGG 3 cut(s) 464, 778, 1018
BseMI GCAATG 2 cut(s) 435, 1140
BseMII CTCAG 1 cut(s) 402
BseRI GAGGAG 4 cut(s) 173, 791, 794, 963
BseSI GKGCMC 1 cut(s) 277
BseXI GCAGC 2 cut(s) 623, 772
Bsh1236I CGCG 1 cut(s) 27
BshNI GGYRCC 2 cut(s) 467, 527
BsiHKAI GWGCWC 2 cut(s) 277, 1041
BsiSI CCGG 2 cut(s) 458, 712
BslFI GGGAC 1 cut(s) 462
BslI CCNNNNNNNGG 3 cut(s) 464, 778, 1018
BsmFI GGGAC 1 cut(s) 462
BsmI GAATGC 1 cut(s) 109
Bsp1286I GDGCHC 2 cut(s) 277, 1041
Bsp13I TCCGGA 1 cut(s) 457
Bsp143I GATC 5 cut(s) 266, 664, 869, 1060, 1118
Bsp19I CCATGG 1 cut(s) 388
BspACI CCGC 2 cut(s) 215, 230
BspCNI CTCAG 1 cut(s) 403
BspEI TCCGGA 1 cut(s) 457
BspFNI CGCG 1 cut(s) 27
BspHI TCATGA 1 cut(s) 241
BspLI GGNNCC 3 cut(s) 469, 529, 1023
BspPI GGATC 2 cut(s) 672, 1113
BspQI GCTCTTC 1 cut(s) 196
BspT107I GGYRCC 2 cut(s) 467, 527
BsrDI GCAATG 2 cut(s) 435, 1140
BssECI CCNNGG 1 cut(s) 388
BssMI GATC 5 cut(s) 266, 664, 869, 1060, 1118
BssT1I CCWWGG 1 cut(s) 388
Bst2UI CCWGG 3 cut(s) 70, 487, 495
Bst4CI ACNGT 3 cut(s) 326, 421, 751
Bst6I CTCTTC 2 cut(s) 196, 1092
BstAPI GCANNNNNTGC 1 cut(s) 212
BstC8I GCNNGC 1 cut(s) 555
BstDEI CTNAG 2 cut(s) 411, 1074
BstDSI CCRYGG 1 cut(s) 388
BstENI CCTNNNNNAGG 1 cut(s) 776
BstF5I GGATG 6 cut(s) 169, 466, 544, 679, 720, 1087
BstFNI CGCG 1 cut(s) 27
BstKTI GATC 5 cut(s) 269, 667, 872, 1063, 1121
BstMBI GATC 5 cut(s) 266, 664, 869, 1060, 1118
BstMWI GCNNNNNNNGC 2 cut(s) 212, 794
BstNI CCWGG 3 cut(s) 70, 487, 495
BstSCI CCNGG 3 cut(s) 68, 485, 493
BstSLI GKGCMC 1 cut(s) 277
BstUI CGCG 1 cut(s) 27
BstV1I GCAGC 2 cut(s) 623, 772
BstX2I RGATCY 1 cut(s) 1118
BstYI RGATCY 1 cut(s) 1118
BtgI CCRYGG 1 cut(s) 388
BtgZI GCGATG 1 cut(s) 42
BtsCI GGATG 6 cut(s) 169, 466, 544, 679, 720, 1087
BtsIMutI CAGTG 1 cut(s) 80
Cac8I GCNNGC 1 cut(s) 555
CciI TCATGA 1 cut(s) 241
Csp6I GTAC 1 cut(s) 50
CspCI CAANNNNNGTGG 2 cut(s) 559, 594
CviAII CATG 4 cut(s) 242, 361, 389, 938
CviQI GTAC 1 cut(s) 50
DdeI CTNAG 2 cut(s) 411, 1074
DpnI GATC 5 cut(s) 268, 666, 871, 1062, 1120
DpnII GATC 5 cut(s) 266, 664, 869, 1060, 1118
Eam1104I CTCTTC 2 cut(s) 196, 1092
EarI CTCTTC 2 cut(s) 196, 1092
Ecl136II GAGCTC 1 cut(s) 1039
Eco130I CCWWGG 1 cut(s) 388
Eco24I GRGCYC 1 cut(s) 1041
Eco53kI GAGCTC 1 cut(s) 1039
Eco57I CTGAAG 1 cut(s) 875
EcoICRI GAGCTC 1 cut(s) 1039
EcoNI CCTNNNNNAGG 1 cut(s) 776
EcoRII CCWGG 3 cut(s) 68, 485, 493
EcoT14I CCWWGG 1 cut(s) 388
EcoT38I GRGCYC 1 cut(s) 1041
ErhI CCWWGG 1 cut(s) 388
FaeI CATG 4 cut(s) 245, 364, 392, 941
FalI AAGNNNNNCTT 2 cut(s) 873, 905
FaqI GGGAC 1 cut(s) 462
FatI CATG 4 cut(s) 241, 360, 388, 937
FauI CCCGC 1 cut(s) 208
FbaI TGATCA 1 cut(s) 1060
Fnu4HI GCNGC 3 cut(s) 231, 612, 786
FokI GGATG 6 cut(s) 176, 473, 551, 666, 727, 1094
FriOI GRGCYC 1 cut(s) 1041
Fsp4HI GCNGC 3 cut(s) 231, 612, 786
FspBI CTAG 4 cut(s) 566, 591, 605, 741
GluI GCNGC 3 cut(s) 231, 612, 786
HapII CCGG 2 cut(s) 458, 712
Hin1II CATG 4 cut(s) 245, 364, 392, 941
HindIII AAGCTT 1 cut(s) 1148
HinfI GANTC 8 cut(s) 35, 91, 132, 184, 396, 498, 629, 897
HpaII CCGG 2 cut(s) 458, 712
HphI GGTGA 4 cut(s) 193, 233, 701, 834
Hpy166II GTNNAC 3 cut(s) 275, 297, 329
Hpy188I TCNGA 3 cut(s) 287, 348, 971
Hpy188III TCNNGA 5 cut(s) 129, 242, 458, 741, 917
Hpy8I GTNNAC 3 cut(s) 275, 297, 329
HpyAV CCTTC 6 cut(s) 248, 594, 749, 875, 879, 1035
HpyCH4III ACNGT 3 cut(s) 326, 421, 751
HpyCH4V TGCA 9 cut(s) 152, 275, 407, 428, 621, 644, 788, 981, 1115
HpyF10VI GCNNNNNNNGC 2 cut(s) 212, 794
HpyF3I CTNAG 2 cut(s) 411, 1074
Hsp92II CATG 4 cut(s) 245, 364, 392, 941
Kpn2I TCCGGA 1 cut(s) 457
Ksp22I TGATCA 1 cut(s) 1060
Kzo9I GATC 5 cut(s) 266, 664, 869, 1060, 1118
LguI GCTCTTC 1 cut(s) 196
LmnI GCTCC 3 cut(s) 1021, 1036, 1113
Lsp1109I GCAGC 2 cut(s) 623, 772
LweI GCATC 3 cut(s) 154, 688, 848
MaeI CTAG 4 cut(s) 566, 591, 605, 741
MaeIII GTNAC 1 cut(s) 1132
MalI GATC 5 cut(s) 268, 666, 871, 1062, 1120
MboI GATC 5 cut(s) 266, 664, 869, 1060, 1118
MboII GAAGA 5 cut(s) 213, 756, 868, 1100, 1109
MfeI CAATTG 1 cut(s) 98
MflI RGATCY 1 cut(s) 1118
MhlI GDGCHC 2 cut(s) 277, 1041
MluCI AATT 8 cut(s) 98, 140, 259, 354, 759, 819, 873, 1031
MlyI GAGTC 3 cut(s) 85, 126, 906
MmeI TCCRAC 3 cut(s) 975, 1059, 1146
MroI TCCGGA 1 cut(s) 457
MroXI GAANNNNTTC 1 cut(s) 931
MseI TTAA 6 cut(s) 111, 249, 302, 311, 866, 1103
MspI CCGG 2 cut(s) 458, 712
MspR9I CCNGG 3 cut(s) 70, 487, 495
MunI CAATTG 1 cut(s) 98
Mva1269I GAATGC 1 cut(s) 109
MvaI CCWGG 3 cut(s) 70, 487, 495
MvnI CGCG 1 cut(s) 27
MwoI GCNNNNNNNGC 2 cut(s) 212, 794
NcoI CCATGG 1 cut(s) 388
NdeII GATC 5 cut(s) 266, 664, 869, 1060, 1118
NlaIII CATG 4 cut(s) 245, 364, 392, 941
NlaIV GGNNCC 3 cut(s) 469, 529, 1023
NmeAIII GCCGAG 1 cut(s) 73
PagI TCATGA 1 cut(s) 241
PciSI GCTCTTC 1 cut(s) 196
PctI GAATGC 1 cut(s) 109
PdmI GAANNNNTTC 1 cut(s) 931
PfeI GAWTC 5 cut(s) 35, 184, 396, 498, 629
PfoI TCCNGGA 1 cut(s) 493
PkrI GCNGC 3 cut(s) 232, 613, 787
PleI GAGTC 3 cut(s) 85, 126, 905
PpsI GAGTC 3 cut(s) 85, 126, 905
PshBI ATTAAT 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 1041
Psp6I CCWGG 3 cut(s) 68, 485, 493
PspGI CCWGG 3 cut(s) 68, 485, 493
PspN4I GGNNCC 3 cut(s) 469, 529, 1023
PsuI RGATCY 1 cut(s) 1118
RsaI GTAC 1 cut(s) 51
RsaNI GTAC 1 cut(s) 50
SacI GAGCTC 1 cut(s) 1041
SapI GCTCTTC 1 cut(s) 196
SaqAI TTAA 6 cut(s) 111, 249, 302, 311, 866, 1103
SatI GCNGC 3 cut(s) 231, 612, 786
Sau3AI GATC 5 cut(s) 266, 664, 869, 1060, 1118
SchI GAGTC 3 cut(s) 85, 126, 906
ScrFI CCNGG 3 cut(s) 70, 487, 495
SduI GDGCHC 2 cut(s) 277, 1041
SfaNI GCATC 3 cut(s) 154, 688, 848
SmlI CTYRAG 3 cut(s) 16, 188, 773
SmoI CTYRAG 3 cut(s) 16, 188, 773
SpeI ACTAGT 1 cut(s) 590
Sse9I AATT 8 cut(s) 98, 140, 259, 354, 759, 819, 873, 1031
SsiI CCGC 2 cut(s) 215, 230
SspMI CTAG 4 cut(s) 566, 591, 605, 741
SstI GAGCTC 1 cut(s) 1041
StyD4I CCNGG 3 cut(s) 68, 485, 493
StyI CCWWGG 1 cut(s) 388
TaaI ACNGT 3 cut(s) 326, 421, 751
TaqI TCGA 1 cut(s) 130
TaqII GACCGA 1 cut(s) 890
TasI AATT 8 cut(s) 98, 140, 259, 354, 759, 819, 873, 1031
TauI GCSGC 1 cut(s) 233
TfiI GAWTC 5 cut(s) 35, 184, 396, 498, 629
Tru1I TTAA 6 cut(s) 111, 249, 302, 311, 866, 1103
Tru9I TTAA 6 cut(s) 111, 249, 302, 311, 866, 1103
TscAI CASTG 1 cut(s) 87
TseI GCWGC 2 cut(s) 611, 785
TspDTI ATGAA 3 cut(s) 230, 267, 1101
TspGWI ACGGA 2 cut(s) 373, 389
TspRI CASTG 1 cut(s) 87
VneI GTGCAC 1 cut(s) 273
VspI ATTAAT 1 cut(s) 249
XagI CCTNNNNNAGG 1 cut(s) 776
XapI RAATTY 2 cut(s) 140, 759
XbaI TCTAGA 1 cut(s) 740
XmnI GAANNNNTTC 1 cut(s) 931
XspI CTAG 4 cut(s) 566, 591, 605, 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.