Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000392

Physical Location & Seq

Genomic Coordinates Forward (+)

16898712 .. 16900317

Gene Structure 1606 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G42260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGAGAACTATATATCTTTCTTTGCTAGTGTTTATTATTGTCTTGGCTTTGAATGAAGTTATGGCCAAGAAACACTCCTCAACACCTAAATTAAGAAGAAGTGATTTTCCAGAAGATTTTATTTTTGGAGCTGCAACGTCAGCTTACCAAGTCGAAGGAGCTGCCCATGAAGATGGTAGAGGTCCAAGTATTTGGGATACATTCTCTGAGAAATATCCGGAGAAGATAAAAGATGGTAGCAATGGATCTATTGCAAGTGATTCTTACCATCTTTACAAGGAAGATGTGGGTTTACTACATCAAATTGGTTTCGATGCCTATAGATTCTCCATCTCGTGGTCGAGGATCTTGCCACGTGAGAATCTAAAAGGAGGAATCAACCAAGCTGGTATTGACTATTACAACAACTTGATCAATGAGCTTTTGTCTAAAGGAATTAAGCCATTCGCCACCATTTTCCATTGGGACACACCGCAAAGCCTTGAAGATGCTTATGGAGGGTTCCTTGGCGCGGAGATTGTGAATGATTTCCGTGATTATGCGGATATTTGTTTCAAGAATTTTGGAGATCGAGTGAAGCATTGGATGACATTGAACGAGCCATTAACAGTTGTGCAACAAGGATATGTTGCTGGTGTAATGGCTCCAGGAAGGTGTTCAAAATTCACAAACCCTAACTGCACCGCGGGAAATGGAGCTACCGAGCCTTATATTGTTGGTCACAACCTCATTCTTGCACATGGAGAAGCAGTCAAAGTATACAGAGAAAAATATAAGGCATCTCAAAAAGGTCAAGTTGGTATCGCCTTAAACGCGGGTTGGAACTTACCTTATTCAGAATCAGCTGAAGATAGGTTAGCTGCGGCAAGAGCTATGGCCTTCACATTCGACTATTTCATGGAGCCGCTTGTAACCGGTAAATACCCGATTGACATGGTCAACTACGTAAAAGGCGGTCGCTTACCTACATTTACTGCAAAACAATCTAAAATGTTGAAGGGATCATATGATTTCATTGGCAGAAATTATTACTCATCTTCTTACGCTAAGGATGTTCCTTGCTCAAGCGAAAACGTTACATTATTCTCTGATCCTTGTGCTAGCGTCACAGGTGAAAGAGAAGGAGTGCCTATCGGTCCAAAGGCAGCATCAGATTGGCTTTTGATATATCCAAAAGGAATTCGTGATCTCCTTCTCTATGCAAAATACAAGTTCAAGGATCCTGTCATGTACATAACCGAAAATGGTAGAGATGAAGCTAGTACCGGTAAAATCGACCTTAAAGATAGTGAGAGGATCGATTACTACGCTCAACATTTGAAGATGGTTCAAGACGCTATATCAATTGGAGCCAATGTTAAGGGATTCTTTGCATGGTCTTTGCTAGATAACTTTGAATGGGCAACGGGCTACGCAGTCCGATTTGGACTAGTTTACGTAGATTTCAACGGTGGACGTAAGAGATATCCCAAAAAATCGGCAAAATGGTTTAAAAAGTTATTAAATGAAAAGAAAAAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009505 GO:0009506 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009812 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010033 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016137 GO:0016143 GO:0016145 GO:0016787 GO:0016798 GO:0016999 GO:0017144 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0022414 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0032989 GO:0033302 GO:0033329 GO:0040007 GO:0042221 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050896 GO:0051552 GO:0051704 GO:0055044 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1901804

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

507

Amino Acids

56.97

Weight (kDa)

8.69

Isoelectric Point (pI)

25.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	34 - 505	2e-158	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25630 AT2G44450 AT2G44450 AT3G60130 AT3G60130 AT3G60130 AT5G42260 AT5G44640
fragaria_vesca	FvH4_5g07160 FvH4_5g07180 FvH4_5g07811 FvH4_5g07831 FvH4_5g07831 FvH4_5g07832 FvH4_6g19950 FvH4_6g19950 FvH4_6g19950
malus_domestica	MD01G1120900.v1.1 MD06G1144600.v1.1 MD06G1144800.v1.1 MD06G1145700.v1.1 MD06G1146100.v1.1 MD06G1147000.v1.1 MD08G1072600.v1.1 MD08G1142300.v1.1 MD08G1191100.v1.1 MD14G1159400.v1.1 MD14G1160300.v1.1 MD14G1160600.v1.1 MD14G1160700.v1.1 MD14G1161400.v1.1
prunus_persica	Prupe.1G525400_v2.0.a1 Prupe.1G583900_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G156500_v2.0.a1
pyrus_communis	pycom06g13390 pycom06g13520 pycom06g13560 pycom06g13640 pycom08g12030 pycom14g13310 pycom14g13430
rosa_chinensis	RchiOBHm_Chr3g0475401 RchiOBHm_Chr7g0190551 RchiOBHm_Chr7g0190631 RchiOBHm_Chr7g0190641 RchiOBHm_Chr7g0191241 RchiOBHm_Chr7g0191251 RchiOBHm_Chr7g0191261 RchiOBHm_Chr7g0202591
rosa_laevigata	RLG00000004507 RLG00000004508 RLG00000004516 RLG00000023846 RLG00000035079
rosa_multiflora	Rmu_co8005672.1_g000001 Rmu_co8018538.1_g000001 Rmu_sc0000526.1_g000002 Rmu_sc0001786.1_g000011 Rmu_sc0006709.1_g000007 Rmu_sc0006709.1_g000008 Rmu_sc0016637.1_g000004
rosa_roxburghii	Rroxscaffold_1G00018560 Rroxscaffold_1G00024050 Rroxscaffold_3G00264440 Rroxscaffold_3G00264450 Rroxscaffold_4G00306640 Rroxscaffold_6G00406340
rosa_rugosa	Rorug03G0295600 Rorug05G0298500 Rorug06G0072900 Rorug06G0505100 Rorug06G0505800 Rorug06G0505900 Rorug06G0506000
rosa_samantha	Rh1CG344200 Rh2AG107900 Rh3AG198700 Rh3CG223000 Rh5AG369500 Rh5BG469700 Rh5BG469800 Rh5DG483000 Rh7AG111700 Rh7AG112400 Rh7AG112500 Rh7AG112600 Rh7CG116400 Rh7CG117400 Rh7CG117500 Rh7CG117600 Rh7CG122100 Rh7CG122200 Rh7DG115600 Rh7DG116400 Rh7DG116500
rosa_wichuraiana	Rw3G018030 Rw7G009740 Rw7G009810 Rw7G009820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	336
AccI	GTMKAC	1 cut(s)	759
AccII	CGCG	3 cut(s)	512, 686, 815
AccIII	TCCGGA	1 cut(s)	217
AciI	CCGC	9 cut(s)	473, 512, 542, 684, 686, 815, 863, 905, 954
AclI	AACGTT	1 cut(s)	1074
AclWI	GGATC	7 cut(s)	253, 353, 1009, 1085, 1214, 1227, 1304
AcoI	YGGCCR	1 cut(s)	63
AcsI	RAATTY	3 cut(s)	559, 662, 1179
AcuI	CTGAAG	1 cut(s)	867
AcvI	CACGTG	1 cut(s)	356
AfaI	GTAC	2 cut(s)	1232, 1264
AfiI	CCNNNNNNNGG	2 cut(s)	336, 511
AgeI	ACCGGT	2 cut(s)	914, 1265
AhlI	ACTAGT	1 cut(s)	1429
AjnI	CCWGG	1 cut(s)	646
AlwI	GGATC	7 cut(s)	253, 353, 1009, 1085, 1214, 1227, 1304
Aor13HI	TCCGGA	1 cut(s)	217
AoxI	GGCC	2 cut(s)	63, 876
ApeKI	GCWGC	4 cut(s)	131, 161, 860, 1145
ApoI	RAATTY	3 cut(s)	559, 662, 1179
AsiGI	ACCGGT	2 cut(s)	914, 1265
Asp700I	GAANNNNTTC	2 cut(s)	527, 655
AspLEI	GCGC	1 cut(s)	512
AspS9I	GGNCC	2 cut(s)	182, 1136
AsuHPI	GGTGA	1 cut(s)	1124
AsuNHI	GCTAGC	1 cut(s)	1100
AvaII	GGWCC	2 cut(s)	182, 1136
BalI	TGGCCA	1 cut(s)	65
BamHI	GGATCC	1 cut(s)	1219
BauI	CACGAG	1 cut(s)	334
BbrPI	CACGTG	1 cut(s)	356
BbvI	GCAGC	4 cut(s)	118, 148, 847, 1157
BccI	CCATC	5 cut(s)	167, 227, 276, 338, 1318
BcgI	CGANNNNNNTGC	4 cut(s)	143, 177, 331, 365
BciT130I	CCWGG	1 cut(s)	648
BciVI	GTATCC	1 cut(s)	190
BclI	TGATCA	1 cut(s)	411
BcuI	ACTAGT	1 cut(s)	1429
BfaI	CTAG	5 cut(s)	26, 1101, 1260, 1385, 1430
BfmI	CTRYAG	1 cut(s)	319
BfuI	GTATCC	1 cut(s)	190
BisI	GCNGC	6 cut(s)	132, 162, 861, 864, 905, 1146
BlsI	GCNGC	6 cut(s)	133, 163, 862, 865, 906, 1147
Bme1390I	CCNGG	1 cut(s)	648
Bme18I	GGWCC	2 cut(s)	182, 1136
BmgT120I	GGNCC	2 cut(s)	182, 1136
BmiI	GGNNCC	5 cut(s)	503, 645, 903, 1221, 1351
BmrFI	CCNGG	1 cut(s)	648
BmsI	GCATC	4 cut(s)	304, 478, 788, 1157
BmtI	GCTAGC	1 cut(s)	1104
BpmI	CTGGAG	1 cut(s)	630
Bpu10I	CCTNAGC	1 cut(s)	1047
BpuEI	CTTGAG	1 cut(s)	1048
Bsa29I	ATCGAT	1 cut(s)	1299
BsaAI	YACGTR	3 cut(s)	356, 946, 1438
BsaJI	CCNNGG	2 cut(s)	505, 684
BsaWI	WCCGGW	3 cut(s)	217, 914, 1265
BsaXI	ACNNNNNCTCC	6 cut(s)	558, 588, 735, 765, 1341, 1371
Bsc4I	CCNNNNNNNGG	2 cut(s)	336, 511
Bse118I	RCCGGY	2 cut(s)	914, 1265
Bse3DI	GCAATG	1 cut(s)	247
BseAI	TCCGGA	1 cut(s)	217
BseBI	CCWGG	1 cut(s)	648
BseCI	ATCGAT	1 cut(s)	1299
BseDI	CCNNGG	2 cut(s)	505, 684
BseGI	GGATG	2 cut(s)	591, 1057
BseLI	CCNNNNNNNGG	2 cut(s)	336, 511
BseMI	GCAATG	1 cut(s)	247
BseMII	CTCAG	1 cut(s)	198
BseRI	GAGGAG	1 cut(s)	67
BseXI	GCAGC	4 cut(s)	118, 148, 847, 1157
BsgI	GTGCAG	1 cut(s)	664
Bsh1236I	CGCG	3 cut(s)	512, 686, 815
Bsh1285I	CGRYCG	1 cut(s)	958
BshFI	GGCC	2 cut(s)	65, 878
BshTI	ACCGGT	2 cut(s)	914, 1265
BshVI	ATCGAT	1 cut(s)	1299
BsiEI	CGRYCG	1 cut(s)	958
BsiSI	CCGG	3 cut(s)	218, 915, 1266
BslFI	GGGAC	1 cut(s)	479
BslI	CCNNNNNNNGG	2 cut(s)	336, 511
BsmFI	GGGAC	1 cut(s)	479
BsnI	GGCC	2 cut(s)	65, 878
Bsp13I	TCCGGA	1 cut(s)	217
Bsp1407I	TGTACA	1 cut(s)	1230
Bsp143I	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
BspACI	CCGC	9 cut(s)	473, 512, 542, 684, 686, 815, 863, 905, 954
BspANI	GGCC	2 cut(s)	65, 878
BspCNI	CTCAG	1 cut(s)	199
BspDI	ATCGAT	1 cut(s)	1299
BspEI	TCCGGA	1 cut(s)	217
BspFNI	CGCG	3 cut(s)	512, 686, 815
BspLI	GGNNCC	5 cut(s)	503, 645, 903, 1221, 1351
BspOI	GCTAGC	1 cut(s)	1104
BspPI	GGATC	7 cut(s)	253, 353, 1009, 1085, 1214, 1227, 1304
BsrDI	GCAATG	1 cut(s)	247
BsrFI	RCCGGY	2 cut(s)	914, 1265
BsrGI	TGTACA	1 cut(s)	1230
BssAI	RCCGGY	2 cut(s)	914, 1265
BssECI	CCNNGG	2 cut(s)	505, 684
BssMI	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
BssNAI	GTATAC	1 cut(s)	760
BssSI	CACGAG	1 cut(s)	334
BssT1I	CCWWGG	1 cut(s)	505
Bst1107I	GTATAC	1 cut(s)	760
Bst2BI	CACGAG	1 cut(s)	334
Bst2UI	CCWGG	1 cut(s)	648
Bst4CI	ACNGT	2 cut(s)	610, 1451
BstAUI	TGTACA	1 cut(s)	1230
BstBAI	YACGTR	3 cut(s)	356, 946, 1438
BstC8I	GCNNGC	1 cut(s)	1102
BstDEI	CTNAG	2 cut(s)	207, 1047
BstDSI	CCRYGG	1 cut(s)	684
BstF5I	GGATG	2 cut(s)	591, 1057
BstFNI	CGCG	3 cut(s)	512, 686, 815
BstHHI	GCGC	1 cut(s)	512
BstKTI	GATC	9 cut(s)	248, 348, 414, 571, 1004, 1093, 1189, 1222, 1299
BstMBI	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
BstMCI	CGRYCG	1 cut(s)	958
BstMWI	GCNNNNNNNGC	3 cut(s)	140, 812, 869
BstNI	CCWGG	1 cut(s)	648
BstSCI	CCNGG	1 cut(s)	646
BstSFI	CTRYAG	1 cut(s)	319
BstSNI	TACGTA	2 cut(s)	946, 1438
BstUI	CGCG	3 cut(s)	512, 686, 815
BstV1I	GCAGC	4 cut(s)	118, 148, 847, 1157
BstX2I	RGATCY	3 cut(s)	245, 345, 1219
BstXI	CCANNNNNNTGG	2 cut(s)	173, 192
BstYI	RGATCY	3 cut(s)	245, 345, 1219
BstZ17I	GTATAC	1 cut(s)	760
Bsu15I	ATCGAT	1 cut(s)	1299
BsuI	GTATCC	1 cut(s)	190
BsuRI	GGCC	2 cut(s)	65, 878
BsuTUI	ATCGAT	1 cut(s)	1299
BtgI	CCRYGG	1 cut(s)	684
BtsCI	GGATG	2 cut(s)	591, 1057
Cac8I	GCNNGC	1 cut(s)	1102
CfoI	GCGC	1 cut(s)	512
Cfr10I	RCCGGY	2 cut(s)	914, 1265
Cfr13I	GGNCC	2 cut(s)	182, 1136
Cfr42I	CCGCGG	1 cut(s)	687
ClaI	ATCGAT	1 cut(s)	1299
CseI	GACGC	2 cut(s)	1093, 1343
Csp6I	GTAC	2 cut(s)	1231, 1263
CspAI	ACCGGT	2 cut(s)	914, 1265
CviAII	CATG	6 cut(s)	167, 740, 898, 934, 1228, 1374
CviQI	GTAC	2 cut(s)	1231, 1263
DdeI	CTNAG	2 cut(s)	207, 1047
DpnI	GATC	9 cut(s)	247, 347, 413, 570, 1003, 1092, 1188, 1221, 1298
DpnII	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
DraI	TTTAAA	1 cut(s)	1492
EaeI	YGGCCR	1 cut(s)	63
Eco105I	TACGTA	2 cut(s)	946, 1438
Eco130I	CCWWGG	1 cut(s)	505
Eco32I	GATATC	1 cut(s)	1466
Eco47I	GGWCC	2 cut(s)	182, 1136
Eco57I	CTGAAG	1 cut(s)	867
Eco72I	CACGTG	1 cut(s)	356
EcoRI	GAATTC	1 cut(s)	1179
EcoRII	CCWGG	1 cut(s)	646
EcoRV	GATATC	1 cut(s)	1466
EcoT14I	CCWWGG	1 cut(s)	505
ErhI	CCWWGG	1 cut(s)	505
FaeI	CATG	6 cut(s)	170, 743, 901, 937, 1231, 1377
FalI	AAGNNNNNCTT	4 cut(s)	247, 279, 1352, 1384
FaqI	GGGAC	1 cut(s)	479
FatI	CATG	6 cut(s)	166, 739, 897, 933, 1227, 1373
FauI	CCCGC	2 cut(s)	679, 808
FauNDI	CATATG	1 cut(s)	1006
FbaI	TGATCA	1 cut(s)	411
FblI	GTMKAC	1 cut(s)	759
Fnu4HI	GCNGC	6 cut(s)	132, 162, 861, 864, 905, 1146
FokI	GGATG	2 cut(s)	598, 1064
Fsp4HI	GCNGC	6 cut(s)	132, 162, 861, 864, 905, 1146
FspBI	CTAG	5 cut(s)	26, 1101, 1260, 1385, 1430
GlaI	GCGC	1 cut(s)	511
GluI	GCNGC	6 cut(s)	132, 162, 861, 864, 905, 1146
GsuI	CTGGAG	1 cut(s)	630
HaeIII	GGCC	2 cut(s)	65, 878
HapII	CCGG	3 cut(s)	218, 915, 1266
HgaI	GACGC	2 cut(s)	1093, 1343
HhaI	GCGC	1 cut(s)	512
Hin1II	CATG	6 cut(s)	170, 743, 901, 937, 1231, 1377
Hin6I	GCGC	1 cut(s)	510
HinP1I	GCGC	1 cut(s)	510
HincII	GTYRAC	1 cut(s)	940
HindII	GTYRAC	1 cut(s)	940
HinfI	GANTC	6 cut(s)	260, 324, 361, 375, 839, 1365
HpaII	CCGG	3 cut(s)	218, 915, 1266
HphI	GGTGA	1 cut(s)	1124
Hpy166II	GTNNAC	5 cut(s)	293, 760, 940, 1435, 1454
Hpy188I	TCNGA	5 cut(s)	208, 838, 1090, 1153, 1421
Hpy188III	TCNNGA	5 cut(s)	110, 218, 556, 1184, 1331
Hpy8I	GTNNAC	5 cut(s)	293, 760, 940, 1435, 1454
HpyAV	CCTTC	6 cut(s)	149, 645, 889, 991, 1115, 1202
HpyCH4III	ACNGT	2 cut(s)	610, 1451
HpyCH4IV	ACGT	6 cut(s)	137, 355, 945, 1074, 1437, 1456
HpyCH4V	TGCA	8 cut(s)	134, 254, 616, 681, 737, 977, 1202, 1373
HpyF10VI	GCNNNNNNNGC	3 cut(s)	140, 812, 869
HpyF3I	CTNAG	2 cut(s)	207, 1047
HpySE526I	ACGT	6 cut(s)	137, 355, 945, 1074, 1437, 1456
Hsp92II	CATG	6 cut(s)	170, 743, 901, 937, 1231, 1377
HspAI	GCGC	1 cut(s)	510
Kpn2I	TCCGGA	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	411
KspI	CCGCGG	1 cut(s)	687
Kzo9I	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
LmnI	GCTCC	6 cut(s)	128, 158, 649, 695, 901, 1349
Lsp1109I	GCAGC	4 cut(s)	118, 148, 847, 1157
LweI	GCATC	4 cut(s)	304, 478, 788, 1157
MaeI	CTAG	5 cut(s)	26, 1101, 1260, 1385, 1430
MaeII	ACGT	6 cut(s)	137, 355, 945, 1074, 1437, 1456
MaeIII	GTNAC	4 cut(s)	719, 910, 1075, 1105
MalI	GATC	9 cut(s)	247, 347, 413, 570, 1003, 1092, 1188, 1221, 1298
MboI	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
MboII	GAAGA	9 cut(s)	108, 125, 182, 235, 293, 497, 860, 1029, 1333
MfeI	CAATTG	1 cut(s)	1344
MflI	RGATCY	3 cut(s)	245, 345, 1219
MlsI	TGGCCA	1 cut(s)	65
MluCI	AATT	9 cut(s)	89, 303, 435, 559, 662, 1024, 1179, 1344, 1519
MluNI	TGGCCA	1 cut(s)	65
MmeI	TCCRAC	1 cut(s)	800
MnlI	CCTC	7 cut(s)	88, 173, 336, 365, 491, 737, 1287
Mox20I	TGGCCA	1 cut(s)	65
MroI	TCCGGA	1 cut(s)	217
MroXI	GAANNNNTTC	2 cut(s)	527, 655
MscI	TGGCCA	1 cut(s)	65
MseI	TTAA	8 cut(s)	92, 438, 605, 809, 1281, 1359, 1491, 1502
MslI	CAYNNNNRTG	1 cut(s)	171
Msp20I	TGGCCA	1 cut(s)	65
MspA1I	CMGCKG	2 cut(s)	686, 845
MspI	CCGG	3 cut(s)	218, 915, 1266
MspR9I	CCNGG	1 cut(s)	648
MunI	CAATTG	1 cut(s)	1344
MvaI	CCWGG	1 cut(s)	648
MvnI	CGCG	3 cut(s)	512, 686, 815
MwoI	GCNNNNNNNGC	3 cut(s)	140, 812, 869
NdeI	CATATG	1 cut(s)	1006
NdeII	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
NheI	GCTAGC	1 cut(s)	1100
NlaIII	CATG	6 cut(s)	170, 743, 901, 937, 1231, 1377
NlaIV	GGNNCC	5 cut(s)	503, 645, 903, 1221, 1351
NmuCI	GTSAC	2 cut(s)	719, 1105
PdmI	GAANNNNTTC	2 cut(s)	527, 655
PfeI	GAWTC	6 cut(s)	260, 324, 361, 375, 839, 1365
PflFI	GACNNNGTC	1 cut(s)	935
PflMI	CCANNNNNTGG	1 cut(s)	336
PfoI	TCCNGGA	1 cut(s)	646
PinAI	ACCGGT	2 cut(s)	914, 1265
PkrI	GCNGC	6 cut(s)	133, 163, 862, 865, 906, 1147
PmaCI	CACGTG	1 cut(s)	356
PmlI	CACGTG	1 cut(s)	356
Ppu21I	YACGTR	3 cut(s)	356, 946, 1438
Psp1406I	AACGTT	1 cut(s)	1074
Psp6I	CCWGG	1 cut(s)	646
PspCI	CACGTG	1 cut(s)	356
PspGI	CCWGG	1 cut(s)	646
PspN4I	GGNNCC	5 cut(s)	503, 645, 903, 1221, 1351
PspPI	GGNCC	2 cut(s)	182, 1136
PsuI	RGATCY	3 cut(s)	245, 345, 1219
PsyI	GACNNNGTC	1 cut(s)	935
PvuII	CAGCTG	1 cut(s)	845
RsaI	GTAC	2 cut(s)	1232, 1264
RsaNI	GTAC	2 cut(s)	1231, 1263
RseI	CAYNNNNRTG	1 cut(s)	171
SacII	CCGCGG	1 cut(s)	687
SaqAI	TTAA	8 cut(s)	92, 438, 605, 809, 1281, 1359, 1491, 1502
SatI	GCNGC	6 cut(s)	132, 162, 861, 864, 905, 1146
Sau3AI	GATC	9 cut(s)	245, 345, 411, 568, 1001, 1090, 1186, 1219, 1296
Sau96I	GGNCC	2 cut(s)	182, 1136
ScrFI	CCNGG	1 cut(s)	648
SfaNI	GCATC	4 cut(s)	304, 478, 788, 1157
SfcI	CTRYAG	1 cut(s)	319
Sfr303I	CCGCGG	1 cut(s)	687
SgrBI	CCGCGG	1 cut(s)	687
SinI	GGWCC	2 cut(s)	182, 1136
SmiMI	CAYNNNNRTG	1 cut(s)	171
SmlI	CTYRAG	1 cut(s)	1063
SmoI	CTYRAG	1 cut(s)	1063
SnaBI	TACGTA	2 cut(s)	946, 1438
SpeI	ACTAGT	1 cut(s)	1429
Sse9I	AATT	9 cut(s)	89, 303, 435, 559, 662, 1024, 1179, 1344, 1519
SsiI	CCGC	9 cut(s)	473, 512, 542, 684, 686, 815, 863, 905, 954
SspMI	CTAG	5 cut(s)	26, 1101, 1260, 1385, 1430
StyD4I	CCNGG	1 cut(s)	646
StyI	CCWWGG	1 cut(s)	505
TaaI	ACNGT	2 cut(s)	610, 1451
TaiI	ACGT	6 cut(s)	140, 358, 948, 1077, 1440, 1459
TaqI	TCGA	7 cut(s)	153, 312, 341, 571, 888, 1275, 1299
TaqII	GACCGA	1 cut(s)	1124
TasI	AATT	9 cut(s)	89, 303, 435, 559, 662, 1024, 1179, 1344, 1519
TatI	WGTACW	1 cut(s)	1230
TauI	GCSGC	2 cut(s)	866, 907
TfiI	GAWTC	6 cut(s)	260, 324, 361, 375, 839, 1365
Tru1I	TTAA	8 cut(s)	92, 438, 605, 809, 1281, 1359, 1491, 1502
Tru9I	TTAA	8 cut(s)	92, 438, 605, 809, 1281, 1359, 1491, 1502
TseFI	GTSAC	2 cut(s)	719, 1105
TseI	GCWGC	4 cut(s)	131, 161, 860, 1145
Tsp45I	GTSAC	2 cut(s)	719, 1105
TspDTI	ATGAA	6 cut(s)	69, 183, 886, 1003, 1269, 1521
TspGWI	ACGGA	1 cut(s)	521
Tth111I	GACNNNGTC	1 cut(s)	935
Van91I	CCANNNNNTGG	1 cut(s)	336
VpaK11BI	GGWCC	2 cut(s)	182, 1136
XapI	RAATTY	3 cut(s)	559, 662, 1179
XmiI	GTMKAC	1 cut(s)	759
XmnI	GAANNNNTTC	2 cut(s)	527, 655
XspI	CTAG	5 cut(s)	26, 1101, 1260, 1385, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.