RchiOBHm_Chr7g0190641

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000392
Physical Location & Seq
Reverse (-)
9645752 .. 9648444
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17029

Sequence Viewer

Length: 1596 bp
ATGGCTTCATCAACAGAGTTTTCCTATGTTCTCATTGTGGTTTTTGCGATGGCTTCCATAGCCTGCTGGCCTGTCGAGGCTAATTTGGAAGGCGTGGTTCCAACTGCGGAGTATTTGACAGTAGGCGGATTGACTTTCGGATTGAATTTAAGCAGTCCATCATATCTCGAAGAACTGAATGTTACGAAATCAGACTTCCCAACTGATTTCGCTTTTGGAGTTGGTACCTCTGCTGGACAGGTTGAAGGGGCAGCGAGAGAATTTGGGAGAGGACCAAGTACATGGGATCATCGCGTTGATACACTCCCTGATATTCAGATTATGAAGGACCTCGGAGTAGATTCTTACCGGTTCTCCATCTCTTGGAGTAGGATTTTACCAAATGGAAGCTTAAGTGGCGGAATTAACCAGCAGGGTGTTGATCACTATAACAGTTTGATTGACGAATTGATAAAAAATGGTATCAAACCTTTCGTGACGATTTTGCACTTTGACTTACCACAAGCTCTGGAAGAGAAATATGGTGGTTACTTGAATCGCTCTTTTGTGAATGATTTTAAAGACTACAGTGAACTTTGCTTCAAATTATTTGGAGATAGAGTTAAGAATTGGTTCACAATTAATGAGCCATCAATTCCTGCTGTATACGGGTATGAAGTCGGGATTGCCCCACCCGGGAAGTGTTCACTTCAGGATGATATTTGTGTGTTTGGGTCTTCAGAGAAATGTTTCGTCCCCGTAGGTCCATGCAAATTTGGTGGCAATTCATCCACAGATCCTTACATTGCAGCCCACAACCAAATTCTTGCTCATGCCACTGCAGCAAAGCTTTACAAAGAGAAATACCAAGCACAGCAAAATGGTGAAATTGGAATCGTCCTTGTTTCTAGATACTATGTGCCTTTTTCAGAATCGCAGGAAGATAAAGCTGCAGCAGAAAGACTATTCGAGTTCAACCTAGGATGGTTTATGGATCCATTTGTGTACGGAGACTACCCAAAGAGTATGAAAGAGTTGGTGAAAGAAAGACTGCCTACATTTTCTCCGGAAGAGAAAATTTTGATCAAGGGAAGTCTAGATTTTGTTGGAATCAATTACTACAAATCAACTTATGCTAGACATAAGGCACCAGCTAAGGAATTGCGCTACACTAATGATGTGTCAGCAGAAGAAATAGGTATCAAAAATGGAATATTTCTGGGCTTGGACCCTAGAGGGCATTGGCCAGAAGGCTTTCAGAAACTGATGGAGCATATAAAGGAAAAGTATCAAAACCCGAAAATCTACATCACCGAAAATGGACTTAGTACTGAAAGAAATGATGCGCTTGGACTTGCTGATCAATTGAAGGATCCGGAAAGAATTGCGTACATTGTTCGTCATTTGTATCGTCTCAATAAGGCAATCAAGAATGGAGTAAACGTGAAAGGGTACTTCTGCTGGGCGCTATTCGACGATTTTGAATGGGGCATGGGATTTCTGGATAGATTTGGTCTATACCATATCGATTTGATTCACAATTACAATCGCATGCCTAAGCTTTCTGCTACATGGTTCAAAGCTTTCCTTCAAAGCAATGTGAACCGAGCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

531

Amino Acids

59.88

Weight (kDa)

5.67

Isoelectric Point (pI)

30.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 63 - 526 2.8e-130 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000392)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25630 AT2G44450 AT2G44450 AT3G60130 AT3G60130 AT3G60130 AT5G42260 AT5G44640
fragaria_vesca FvH4_5g07160 FvH4_5g07180 FvH4_5g07811 FvH4_5g07831 FvH4_5g07831 FvH4_5g07832 FvH4_6g19950 FvH4_6g19950 FvH4_6g19950
malus_domestica MD01G1120900.v1.1 MD06G1144600.v1.1 MD06G1144800.v1.1 MD06G1145700.v1.1 MD06G1146100.v1.1 MD06G1147000.v1.1 MD08G1072600.v1.1 MD08G1142300.v1.1 MD08G1191100.v1.1 MD14G1159400.v1.1 MD14G1160300.v1.1 MD14G1160600.v1.1 MD14G1160700.v1.1 MD14G1161400.v1.1
prunus_persica Prupe.1G525400_v2.0.a1 Prupe.1G583900_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G156500_v2.0.a1
pyrus_communis pycom06g13390 pycom06g13520 pycom06g13560 pycom06g13640 pycom08g12030 pycom14g13310 pycom14g13430
rosa_chinensis RchiOBHm_Chr3g0475401 RchiOBHm_Chr7g0190551 RchiOBHm_Chr7g0190631 RchiOBHm_Chr7g0190641 RchiOBHm_Chr7g0191241 RchiOBHm_Chr7g0191251 RchiOBHm_Chr7g0191261 RchiOBHm_Chr7g0202591
rosa_laevigata RLG00000004507 RLG00000004508 RLG00000004516 RLG00000023846 RLG00000035079
rosa_multiflora Rmu_co8005672.1_g000001 Rmu_co8018538.1_g000001 Rmu_sc0000526.1_g000002 Rmu_sc0001786.1_g000011 Rmu_sc0006709.1_g000007 Rmu_sc0006709.1_g000008 Rmu_sc0016637.1_g000004
rosa_roxburghii Rroxscaffold_1G00018560 Rroxscaffold_1G00024050 Rroxscaffold_3G00264440 Rroxscaffold_3G00264450 Rroxscaffold_4G00306640 Rroxscaffold_6G00406340
rosa_rugosa Rorug03G0295600 Rorug05G0298500 Rorug06G0072900 Rorug06G0505100 Rorug06G0505800 Rorug06G0505900 Rorug06G0506000
rosa_samantha Rh1CG344200 Rh2AG107900 Rh3AG198700 Rh3CG223000 Rh5AG369500 Rh5BG469700 Rh5BG469800 Rh5DG483000 Rh7AG111700 Rh7AG112400 Rh7AG112500 Rh7AG112600 Rh7CG116400 Rh7CG117400 Rh7CG117500 Rh7CG117600 Rh7CG122100 Rh7CG122200 Rh7DG115600 Rh7DG116400 Rh7DG116500
rosa_wichuraiana Rw3G018030 Rw7G009740 Rw7G009810 Rw7G009820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 224
AccB1I GGYRCC 2 cut(s) 224, 1126
AccB7I CCANNNNNTGG 1 cut(s) 363
AccI GTMKAC 1 cut(s) 645
AccII CGCG 1 cut(s) 294
AccIII TCCGGA 2 cut(s) 1045, 1354
AciI CCGC 3 cut(s) 107, 126, 399
AclWI GGATC 6 cut(s) 294, 770, 968, 981, 1346, 1359
AcoI YGGCCR 1 cut(s) 1223
AcsI RAATTY 5 cut(s) 145, 260, 752, 801, 1056
AcuI CTGAAG 2 cut(s) 674, 702
AfaI GTAC 6 cut(s) 226, 280, 986, 1309, 1370, 1433
AfiI CCNNNNNNNGG 2 cut(s) 363, 675
AflII CTTAAG 1 cut(s) 391
AgeI ACCGGT 1 cut(s) 348
AgsI TTSAA 9 cut(s) 145, 245, 535, 583, 955, 1348, 1463, 1558, 1571
AluBI AGCT 9 cut(s) 390, 506, 829, 929, 1133, 1540, 1562, 1589, 1593
AluI AGCT 9 cut(s) 390, 506, 829, 929, 1133, 1540, 1562, 1589, 1593
Alw26I GTCTC 2 cut(s) 984, 1397
AlwI GGATC 6 cut(s) 294, 770, 968, 981, 1346, 1359
AlwNI CAGNNNCTG 1 cut(s) 1243
Ama87I CYCGRG 1 cut(s) 674
Aor13HI TCCGGA 2 cut(s) 1045, 1354
AoxI GGCC 2 cut(s) 68, 1223
ApeKI GCWGC 5 cut(s) 251, 788, 821, 929, 932
ApoI RAATTY 5 cut(s) 145, 260, 752, 801, 1056
AseI ATTAAT 1 cut(s) 621
AsiGI ACCGGT 1 cut(s) 348
Asp700I GAANNNNTTC 3 cut(s) 611, 728, 1233
Asp718I GGTACC 1 cut(s) 224
AspA2I CCTAGG 1 cut(s) 958
AspLEI GCGC 3 cut(s) 1146, 1327, 1447
AspS9I GGNCC 4 cut(s) 272, 328, 743, 1207
AsuC2I CCSGG 2 cut(s) 675, 676
AsuHPI GGTGA 3 cut(s) 875, 1030, 1282
AsuNHI GCTAGC 1 cut(s) 1589
AvaI CYCGRG 1 cut(s) 674
AvaII GGWCC 4 cut(s) 272, 328, 743, 1207
AvrII CCTAGG 1 cut(s) 958
BalI TGGCCA 1 cut(s) 1225
BamHI GGATCC 2 cut(s) 973, 1351
BanI GGYRCC 2 cut(s) 224, 1126
BbsI GAAGAC 1 cut(s) 708
BbvI GCAGC 5 cut(s) 263, 800, 833, 916, 944
BccI CCATC 6 cut(s) 43, 166, 365, 637, 957, 1240
BclI TGATCA 3 cut(s) 421, 1062, 1339
BcnI CCSGG 2 cut(s) 675, 676
BcoDI GTCTC 2 cut(s) 984, 1397
BfaI CTAG 6 cut(s) 888, 959, 1076, 1116, 1212, 1590
BfmI CTRYAG 3 cut(s) 565, 819, 930
BfoI RGCGCY 1 cut(s) 1448
BfrI CTTAAG 1 cut(s) 391
BisI GCNGC 5 cut(s) 252, 789, 822, 930, 933
BlnI CCTAGG 1 cut(s) 958
BlsI GCNGC 5 cut(s) 253, 790, 823, 931, 934
BmcAI AGTACT 1 cut(s) 1309
Bme1390I CCNGG 2 cut(s) 675, 676
Bme18I GGWCC 4 cut(s) 272, 328, 743, 1207
BmeT110I CYCGRG 1 cut(s) 674
BmgT120I GGNCC 4 cut(s) 272, 328, 743, 1207
BmiI GGNNCC 6 cut(s) 99, 226, 975, 1128, 1209, 1353
BmrFI CCNGG 2 cut(s) 675, 676
BmsI GCATC 1 cut(s) 1312
BmtI GCTAGC 1 cut(s) 1593
BpiI GAAGAC 1 cut(s) 708
Bpu10I CCTNAGC 2 cut(s) 1134, 1536
BpuMI CCSGG 2 cut(s) 675, 676
Bsa29I ATCGAT 1 cut(s) 1506
BsaJI CCNNGG 3 cut(s) 331, 674, 958
BsaWI WCCGGW 3 cut(s) 348, 1045, 1354
BsaXI ACNNNNNCTCC 8 cut(s) 338, 368, 585, 615, 1027, 1057, 1407, 1437
Bsc4I CCNNNNNNNGG 2 cut(s) 363, 675
Bse118I RCCGGY 1 cut(s) 348
Bse3DI GCAATG 2 cut(s) 783, 1582
BseAI TCCGGA 2 cut(s) 1045, 1354
BseCI ATCGAT 1 cut(s) 1506
BseDI CCNNGG 3 cut(s) 331, 674, 958
BseGI GGATG 3 cut(s) 700, 767, 968
BseLI CCNNNNNNNGG 2 cut(s) 363, 675
BseMI GCAATG 2 cut(s) 783, 1582
BseXI GCAGC 5 cut(s) 263, 800, 833, 916, 944
BseYI CCCAGC 1 cut(s) 1440
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 2 cut(s) 70, 1225
BshNI GGYRCC 2 cut(s) 224, 1126
BshTI ACCGGT 1 cut(s) 348
BshVI ATCGAT 1 cut(s) 1506
BsiHKCI CYCGRG 1 cut(s) 674
BsiSI CCGG 4 cut(s) 349, 675, 1046, 1355
BslFI GGGAC 1 cut(s) 719
BslI CCNNNNNNNGG 2 cut(s) 363, 675
BsmAI GTCTC 2 cut(s) 984, 1397
BsmBI CGTCTC 1 cut(s) 1397
BsmFI GGGAC 1 cut(s) 719
BsnI GGCC 2 cut(s) 70, 1225
BsoBI CYCGRG 1 cut(s) 674
Bsp13I TCCGGA 2 cut(s) 1045, 1354
Bsp143I GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
BspACI CCGC 3 cut(s) 107, 126, 399
BspANI GGCC 2 cut(s) 70, 1225
BspDI ATCGAT 1 cut(s) 1506
BspEI TCCGGA 2 cut(s) 1045, 1354
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 6 cut(s) 99, 226, 975, 1128, 1209, 1353
BspMAI CTGCAG 2 cut(s) 823, 934
BspOI GCTAGC 1 cut(s) 1593
BspPI GGATC 6 cut(s) 294, 770, 968, 981, 1346, 1359
BspT107I GGYRCC 2 cut(s) 224, 1126
BspTI CTTAAG 1 cut(s) 391
BsrDI GCAATG 2 cut(s) 783, 1582
BsrFI RCCGGY 1 cut(s) 348
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 3 cut(s) 331, 674, 958
BssMI GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
BssNAI GTATAC 1 cut(s) 646
BssT1I CCWWGG 1 cut(s) 958
Bst1107I GTATAC 1 cut(s) 646
Bst4CI ACNGT 3 cut(s) 121, 434, 569
Bst6I CTCTTC 2 cut(s) 507, 1044
BstAFI CTTAAG 1 cut(s) 391
BstC8I GCNNGC 4 cut(s) 64, 68, 1532, 1591
BstDEI CTNAG 3 cut(s) 1134, 1304, 1536
BstF5I GGATG 3 cut(s) 700, 767, 968
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 1 cut(s) 1448
BstHHI GCGC 3 cut(s) 1146, 1327, 1447
BstKTI GATC 7 cut(s) 289, 424, 778, 976, 1065, 1342, 1354
BstMAI GTCTC 2 cut(s) 984, 1397
BstMBI GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
BstMWI GCNNNNNNNGC 3 cut(s) 59, 396, 821
BstNSI RCATGY 1 cut(s) 1534
BstSCI CCNGG 2 cut(s) 673, 674
BstSFI CTRYAG 3 cut(s) 565, 819, 930
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 5 cut(s) 263, 800, 833, 916, 944
BstV2I GAAGAC 1 cut(s) 708
BstX2I RGATCY 3 cut(s) 775, 973, 1351
BstXI CCANNNNNNTGG 1 cut(s) 282
BstYI RGATCY 3 cut(s) 775, 973, 1351
BstZ17I GTATAC 1 cut(s) 646
Bsu15I ATCGAT 1 cut(s) 1506
BsuRI GGCC 2 cut(s) 70, 1225
BsuTUI ATCGAT 1 cut(s) 1506
BtgZI GCGATG 2 cut(s) 62, 275
BtsCI GGATG 3 cut(s) 700, 767, 968
BtsI GCAGTG 1 cut(s) 816
BtsIMutI CAGTG 2 cut(s) 574, 816
Cac8I GCNNGC 4 cut(s) 64, 68, 1532, 1591
CaiI CAGNNNCTG 1 cut(s) 1243
CfoI GCGC 3 cut(s) 1146, 1327, 1447
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 4 cut(s) 272, 328, 743, 1207
Cfr9I CCCGGG 1 cut(s) 674
ClaI ATCGAT 1 cut(s) 1506
Csp6I GTAC 6 cut(s) 225, 279, 985, 1308, 1369, 1432
CspAI ACCGGT 1 cut(s) 348
CspCI CAANNNNNGTGG 2 cut(s) 739, 774
CviAII CATG 6 cut(s) 282, 747, 812, 1471, 1531, 1551
CviQI GTAC 6 cut(s) 225, 279, 985, 1308, 1369, 1432
DdeI CTNAG 3 cut(s) 1134, 1304, 1536
DpnI GATC 7 cut(s) 288, 423, 777, 975, 1064, 1341, 1353
DpnII GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
DraI TTTAAA 1 cut(s) 559
EaeI YGGCCR 1 cut(s) 1223
Eam1104I CTCTTC 2 cut(s) 507, 1044
EarI CTCTTC 2 cut(s) 507, 1044
EciI GGCGGA 2 cut(s) 141, 414
Eco130I CCWWGG 1 cut(s) 958
Eco47I GGWCC 4 cut(s) 272, 328, 743, 1207
Eco57I CTGAAG 2 cut(s) 674, 702
Eco88I CYCGRG 1 cut(s) 674
EcoO109I RGGNCCY 1 cut(s) 328
EcoT14I CCWWGG 1 cut(s) 958
ErhI CCWWGG 1 cut(s) 958
Esp3I CGTCTC 1 cut(s) 1397
FaeI CATG 6 cut(s) 285, 750, 815, 1474, 1534, 1554
FalI AAGNNNNNCTT 2 cut(s) 1551, 1583
FaqI GGGAC 1 cut(s) 719
FatI CATG 6 cut(s) 281, 746, 811, 1470, 1530, 1550
FbaI TGATCA 3 cut(s) 421, 1062, 1339
FblI GTMKAC 1 cut(s) 645
Fnu4HI GCNGC 5 cut(s) 252, 789, 822, 930, 933
FokI GGATG 3 cut(s) 707, 754, 975
Fsp4HI GCNGC 5 cut(s) 252, 789, 822, 930, 933
FspBI CTAG 6 cut(s) 888, 959, 1076, 1116, 1212, 1590
GlaI GCGC 3 cut(s) 1145, 1326, 1446
GluI GCNGC 5 cut(s) 252, 789, 822, 930, 933
GsaI CCCAGC 1 cut(s) 1444
HaeII RGCGCY 1 cut(s) 1448
HaeIII GGCC 2 cut(s) 70, 1225
HapII CCGG 4 cut(s) 349, 675, 1046, 1355
HhaI GCGC 3 cut(s) 1146, 1327, 1447
Hin1II CATG 6 cut(s) 285, 750, 815, 1474, 1534, 1554
Hin6I GCGC 3 cut(s) 1144, 1325, 1445
HinP1I GCGC 3 cut(s) 1144, 1325, 1445
HindIII AAGCTT 4 cut(s) 388, 827, 1538, 1560
HinfI GANTC 6 cut(s) 341, 535, 873, 911, 1089, 1513
HpaII CCGG 4 cut(s) 349, 675, 1046, 1355
HphI GGTGA 3 cut(s) 875, 1030, 1282
Hpy166II GTNNAC 7 cut(s) 572, 615, 646, 686, 985, 1420, 1582
Hpy188I TCNGA 7 cut(s) 140, 193, 318, 335, 721, 910, 1239
Hpy8I GTNNAC 7 cut(s) 572, 615, 646, 686, 985, 1420, 1582
Hpy99I CGWCG 1 cut(s) 1457
HpyAV CCTTC 6 cut(s) 83, 239, 319, 1223, 1342, 1577
HpyCH4III ACNGT 3 cut(s) 121, 434, 569
HpyCH4IV ACGT 1 cut(s) 1422
HpyCH4V TGCA 5 cut(s) 487, 750, 788, 821, 932
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 396, 821
HpyF3I CTNAG 3 cut(s) 1134, 1304, 1536
HpySE526I ACGT 1 cut(s) 1422
Hsp92II CATG 6 cut(s) 285, 750, 815, 1474, 1534, 1554
HspAI GCGC 3 cut(s) 1144, 1325, 1445
Kpn2I TCCGGA 2 cut(s) 1045, 1354
KpnI GGTACC 1 cut(s) 228
Ksp22I TGATCA 3 cut(s) 421, 1062, 1339
Kzo9I GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
LmnI GCTCC 1 cut(s) 1249
Lsp1109I GCAGC 5 cut(s) 263, 800, 833, 916, 944
LweI GCATC 1 cut(s) 1312
MaeI CTAG 6 cut(s) 888, 959, 1076, 1116, 1212, 1590
MaeII ACGT 1 cut(s) 1422
MaeIII GTNAC 3 cut(s) 181, 475, 527
MalI GATC 7 cut(s) 288, 423, 777, 975, 1064, 1341, 1353
MboI GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
MboII GAAGA 6 cut(s) 182, 524, 708, 932, 1061, 1181
MfeI CAATTG 1 cut(s) 1343
MflI RGATCY 3 cut(s) 775, 973, 1351
MlsI TGGCCA 1 cut(s) 1225
MluNI TGGCCA 1 cut(s) 1225
MmeI TCCRAC 2 cut(s) 125, 1066
MnlI CCTC 5 cut(s) 70, 238, 263, 341, 1208
Mox20I TGGCCA 1 cut(s) 1225
MroI TCCGGA 2 cut(s) 1045, 1354
MroXI GAANNNNTTC 3 cut(s) 611, 728, 1233
MscI TGGCCA 1 cut(s) 1225
MseI TTAA 6 cut(s) 149, 392, 405, 558, 603, 621
Msp20I TGGCCA 1 cut(s) 1225
MspCI CTTAAG 1 cut(s) 391
MspI CCGG 4 cut(s) 349, 675, 1046, 1355
MspR9I CCNGG 2 cut(s) 675, 676
MunI CAATTG 1 cut(s) 1343
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 3 cut(s) 59, 396, 821
NciI CCSGG 2 cut(s) 675, 676
NdeII GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
NheI GCTAGC 1 cut(s) 1589
NlaIII CATG 6 cut(s) 285, 750, 815, 1474, 1534, 1554
NlaIV GGNNCC 6 cut(s) 99, 226, 975, 1128, 1209, 1353
NmuCI GTSAC 1 cut(s) 475
NspI RCATGY 1 cut(s) 1534
PaeI GCATGC 1 cut(s) 1534
PdmI GAANNNNTTC 3 cut(s) 611, 728, 1233
PfeI GAWTC 6 cut(s) 341, 535, 873, 911, 1089, 1513
PflMI CCANNNNNTGG 1 cut(s) 363
PinAI ACCGGT 1 cut(s) 348
PkrI GCNGC 5 cut(s) 253, 790, 823, 931, 934
PpuMI RGGWCCY 1 cut(s) 328
PshBI ATTAAT 1 cut(s) 621
Psp5II RGGWCCY 1 cut(s) 328
PspFI CCCAGC 1 cut(s) 1440
PspN4I GGNNCC 6 cut(s) 99, 226, 975, 1128, 1209, 1353
PspPI GGNCC 4 cut(s) 272, 328, 743, 1207
PspPPI RGGWCCY 1 cut(s) 328
PstI CTGCAG 2 cut(s) 823, 934
PstNI CAGNNNCTG 1 cut(s) 1243
PsuI RGATCY 3 cut(s) 775, 973, 1351
RsaI GTAC 6 cut(s) 226, 280, 986, 1309, 1370, 1433
RsaNI GTAC 6 cut(s) 225, 279, 985, 1308, 1369, 1432
SaqAI TTAA 6 cut(s) 149, 392, 405, 558, 603, 621
SatI GCNGC 5 cut(s) 252, 789, 822, 930, 933
Sau3AI GATC 7 cut(s) 286, 421, 775, 973, 1062, 1339, 1351
Sau96I GGNCC 4 cut(s) 272, 328, 743, 1207
ScaI AGTACT 1 cut(s) 1309
ScrFI CCNGG 2 cut(s) 675, 676
SfaNI GCATC 1 cut(s) 1312
SfcI CTRYAG 3 cut(s) 565, 819, 930
SinI GGWCC 4 cut(s) 272, 328, 743, 1207
SmaI CCCGGG 1 cut(s) 676
SmlI CTYRAG 1 cut(s) 391
SmoI CTYRAG 1 cut(s) 391
SphI GCATGC 1 cut(s) 1534
SsiI CCGC 3 cut(s) 107, 126, 399
SspI AATATT 1 cut(s) 1194
SspMI CTAG 6 cut(s) 888, 959, 1076, 1116, 1212, 1590
StyD4I CCNGG 2 cut(s) 673, 674
StyI CCWWGG 1 cut(s) 958
TaaI ACNGT 3 cut(s) 121, 434, 569
TaiI ACGT 1 cut(s) 1425
TaqI TCGA 5 cut(s) 75, 168, 948, 1452, 1506
TatI WGTACW 2 cut(s) 278, 1307
TfiI GAWTC 6 cut(s) 341, 535, 873, 911, 1089, 1513
Tru1I TTAA 6 cut(s) 149, 392, 405, 558, 603, 621
Tru9I TTAA 6 cut(s) 149, 392, 405, 558, 603, 621
TscAI CASTG 2 cut(s) 574, 823
TseFI GTSAC 1 cut(s) 475
TseI GCWGC 5 cut(s) 251, 788, 821, 929, 932
Tsp45I GTSAC 1 cut(s) 475
TspDTI ATGAA 4 cut(s) 338, 669, 756, 1022
TspGWI ACGGA 1 cut(s) 1002
TspMI CCCGGG 1 cut(s) 674
TspRI CASTG 2 cut(s) 574, 823
Van91I CCANNNNNTGG 1 cut(s) 363
Vha464I CTTAAG 1 cut(s) 391
VpaK11BI GGWCC 4 cut(s) 272, 328, 743, 1207
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 5 cut(s) 145, 260, 752, 801, 1056
XbaI TCTAGA 2 cut(s) 887, 1075
XceI RCATGY 1 cut(s) 1534
XmaI CCCGGG 1 cut(s) 674
XmaJI CCTAGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 645
XmnI GAANNNNTTC 3 cut(s) 611, 728, 1233
XspI CTAG 6 cut(s) 888, 959, 1076, 1116, 1212, 1590
ZrmI AGTACT 1 cut(s) 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.