RLG00000004507

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000392
Physical Location & Seq
Forward (+)
59927392 .. 59930330
2939 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004507

Sequence Viewer

Length: 1659 bp
ATGGCTTCATCGACAGAGTTTTCCTATGCTCTCATTGTGGTTTTTGCGATGGCTTCCGTAGCCTGCTGGCCTGTCGAGGCTAATTGGGACGGCGTGGTTCCAACTGTGGAGAATTTGATAGTAGACGGATTCACTTTCGGATTGAATTTAAGCAGTCCTTCATATCTCGAAGAACTGAATGTTACGAAATCAGACTTCCCAGCTGATTTCGCTTTTGGAGTTGGTACCTCTGCTGGACAGGTTGAAGGGGCAGCGAGAGAATTTGGGAGAGGACCAAGTACATGGGATCATCGCGTTGATACACTCCCTGGTAGTATTCACAACAGCGACAATTTTTCTACAGCAATTGATTCATATAGACGATACAAGGAAGATATTCAGATTATGAAGGACCTCGGAGTAGATTCTTACCGATTCTCCATCTCTTGGAGTAGGATTTTACCAAATGGAAGCTTAAGCGGCGGAATTAACCAGCAGGGTGTTGATCACTATAACAGTTTGATTGACGAATTGATCAAAAATGGTATCAAACCTTTCGTGACGATTTTGCACTTTGACTTACCACAAGCTCTGGAAGAGAAATATGGTGGTTACTTGAATCACTCTTTTGTGAATGATTTTAAAGACTATAGTGAACTTTGCTTCAAATTATTTGGAGACAGAGTTAAGAATTGGTTCACAATTAATGAGCCATCAATTCCTGCTGTATACGGGTATGAAATCGGGATTGCCCCACCCGGGAAGTGTTCACTTCAGGATGATATTTGTGTGTTTGGGTCTTCAGAGAAATGTTTCGTCCCCGTAGGTCCATGCAAATTTGGTGGCAATTCATCCACAGATCCTTACATTGCAGCCCACAACCAGATCCTTGCTCATGCCACTGCAGCAAAGCTTTACAAAGAGAAATACCAAGGACAGCAAAATGGTGAAATTGGAATCGTCCTTGTTTCTAGATACTATGTGCCTTTTTCAGAATCGCAGGAAGATAGAGCTGCAGCGGAAAGACTCTTCGAGTTCACCCTAGGATGGTTTATGGATCCATTTGTGTACGGAGATTACCCAAAGAGTATGAAAGAGTTGGTGAAAGAAAGACTGCCTACATTTTCTCCGGAAGAGAAAATTTTGATCAAGGGAAGTCTAGATTTTGTTGGAATCAATTACTACATATCAACTTATGCTAGACATAAGGCACCATCTAAGGAATTGCGCTACAGTTATGATGCGTCAGCCGAAGAAATAGGTATCAAAAATGGAATTTTTCTGGGCTTGGACGCTAGAGGGCATTGGCCAGAAGGCTTTCAGAAACTGATGGAGCATATAAAGGAAAAGTATCAAAACCCGAAAATCTACATCACCGAAAATGGACTTAGTACGGAAAGAAATGATGCACTTGCACTTGCTGATCAATTGAAGGATCCGGAAAGAATTGCATACATTGTTCGTCATTTGTATCGTCTCAATAAGGCAATCAAGAATGGAGTAAACGTGAAAGGGTACTTCTGCTGGGCGCTATTCGATGATTTTGAATGGGGCATGGGATTTCTGGATAGATTTGGTTTATACCATATCGATTTGATTCACAATTACAAACGCATGCCTAAGCTTTCTGCTACATGGTTCAAAGCTTTCCTTCAAAGCAATGTGAACCGAGCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

553

Amino Acids

62.39

Weight (kDa)

5.63

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 63 - 547 2.3e-145 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000392)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25630 AT2G44450 AT2G44450 AT3G60130 AT3G60130 AT3G60130 AT5G42260 AT5G44640
fragaria_vesca FvH4_5g07160 FvH4_5g07180 FvH4_5g07811 FvH4_5g07831 FvH4_5g07831 FvH4_5g07832 FvH4_6g19950 FvH4_6g19950 FvH4_6g19950
malus_domestica MD01G1120900.v1.1 MD06G1144600.v1.1 MD06G1144800.v1.1 MD06G1145700.v1.1 MD06G1146100.v1.1 MD06G1147000.v1.1 MD08G1072600.v1.1 MD08G1142300.v1.1 MD08G1191100.v1.1 MD14G1159400.v1.1 MD14G1160300.v1.1 MD14G1160600.v1.1 MD14G1160700.v1.1 MD14G1161400.v1.1
prunus_persica Prupe.1G525400_v2.0.a1 Prupe.1G583900_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G156500_v2.0.a1
pyrus_communis pycom06g13390 pycom06g13520 pycom06g13560 pycom06g13640 pycom08g12030 pycom14g13310 pycom14g13430
rosa_chinensis RchiOBHm_Chr3g0475401 RchiOBHm_Chr7g0190551 RchiOBHm_Chr7g0190631 RchiOBHm_Chr7g0190641 RchiOBHm_Chr7g0191241 RchiOBHm_Chr7g0191251 RchiOBHm_Chr7g0191261 RchiOBHm_Chr7g0202591
rosa_laevigata RLG00000004507 RLG00000004508 RLG00000004516 RLG00000023846 RLG00000035079
rosa_multiflora Rmu_co8005672.1_g000001 Rmu_co8018538.1_g000001 Rmu_sc0000526.1_g000002 Rmu_sc0001786.1_g000011 Rmu_sc0006709.1_g000007 Rmu_sc0006709.1_g000008 Rmu_sc0016637.1_g000004
rosa_roxburghii Rroxscaffold_1G00018560 Rroxscaffold_1G00024050 Rroxscaffold_3G00264440 Rroxscaffold_3G00264450 Rroxscaffold_4G00306640 Rroxscaffold_6G00406340
rosa_rugosa Rorug03G0295600 Rorug05G0298500 Rorug06G0072900 Rorug06G0505100 Rorug06G0505800 Rorug06G0505900 Rorug06G0506000
rosa_samantha Rh1CG344200 Rh2AG107900 Rh3AG198700 Rh3CG223000 Rh5AG369500 Rh5BG469700 Rh5BG469800 Rh5DG483000 Rh7AG111700 Rh7AG112400 Rh7AG112500 Rh7AG112600 Rh7CG116400 Rh7CG117400 Rh7CG117500 Rh7CG117600 Rh7CG122100 Rh7CG122200 Rh7DG115600 Rh7DG116400 Rh7DG116500
rosa_wichuraiana Rw3G018030 Rw7G009740 Rw7G009810 Rw7G009820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 224
AccB1I GGYRCC 2 cut(s) 224, 1189
AccB7I CCANNNNNTGG 1 cut(s) 426
AccI GTMKAC 2 cut(s) 123, 708
AccII CGCG 1 cut(s) 294
AccIII TCCGGA 2 cut(s) 1108, 1417
AciI CCGC 3 cut(s) 459, 462, 998
AclWI GGATC 7 cut(s) 294, 833, 859, 1031, 1044, 1409, 1422
AcoI YGGCCR 1 cut(s) 1286
AcsI RAATTY 6 cut(s) 112, 145, 260, 815, 1119, 1254
AcuI CTGAAG 2 cut(s) 737, 765
AfaI GTAC 5 cut(s) 226, 280, 1049, 1372, 1496
AfiI CCNNNNNNNGG 3 cut(s) 426, 738, 1026
AflII CTTAAG 1 cut(s) 454
AgsI TTSAA 8 cut(s) 145, 245, 598, 646, 1411, 1526, 1621, 1634
AjnI CCWGG 1 cut(s) 307
AluBI AGCT 9 cut(s) 203, 453, 569, 892, 992, 1603, 1625, 1652, 1656
AluI AGCT 9 cut(s) 203, 453, 569, 892, 992, 1603, 1625, 1652, 1656
Alw26I GTCTC 2 cut(s) 651, 1460
AlwI GGATC 7 cut(s) 294, 833, 859, 1031, 1044, 1409, 1422
AlwNI CAGNNNCTG 1 cut(s) 1306
Ama87I CYCGRG 1 cut(s) 737
Aor13HI TCCGGA 2 cut(s) 1108, 1417
AoxI GGCC 2 cut(s) 68, 1286
ApeKI GCWGC 5 cut(s) 251, 851, 884, 992, 995
ApoI RAATTY 6 cut(s) 112, 145, 260, 815, 1119, 1254
AseI ATTAAT 1 cut(s) 684
Asp700I GAANNNNTTC 4 cut(s) 375, 674, 791, 1296
Asp718I GGTACC 1 cut(s) 224
AspA2I CCTAGG 1 cut(s) 1021
AspLEI GCGC 2 cut(s) 1209, 1510
AspS9I GGNCC 3 cut(s) 272, 391, 806
AsuC2I CCSGG 2 cut(s) 738, 739
AsuHPI GGTGA 4 cut(s) 938, 1009, 1093, 1345
AsuNHI GCTAGC 1 cut(s) 1652
AvaI CYCGRG 1 cut(s) 737
AvaII GGWCC 3 cut(s) 272, 391, 806
AvrII CCTAGG 1 cut(s) 1021
BalI TGGCCA 1 cut(s) 1288
BamHI GGATCC 2 cut(s) 1036, 1414
BanI GGYRCC 2 cut(s) 224, 1189
BbsI GAAGAC 1 cut(s) 771
BbvI GCAGC 5 cut(s) 263, 863, 896, 979, 1007
BccI CCATC 6 cut(s) 43, 428, 700, 1020, 1201, 1303
BceAI ACGGC 1 cut(s) 106
BciT130I CCWGG 1 cut(s) 309
BclI TGATCA 4 cut(s) 484, 513, 1125, 1402
BcnI CCSGG 2 cut(s) 738, 739
BcoDI GTCTC 2 cut(s) 651, 1460
BfaI CTAG 6 cut(s) 951, 1022, 1139, 1179, 1275, 1653
BfmI CTRYAG 5 cut(s) 339, 628, 882, 993, 1210
BfoI RGCGCY 1 cut(s) 1511
BfrI CTTAAG 1 cut(s) 454
BisI GCNGC 6 cut(s) 252, 460, 852, 885, 993, 996
BlnI CCTAGG 1 cut(s) 1021
BlsI GCNGC 6 cut(s) 253, 461, 853, 886, 994, 997
Bme1390I CCNGG 3 cut(s) 309, 738, 739
Bme18I GGWCC 3 cut(s) 272, 391, 806
BmeT110I CYCGRG 1 cut(s) 737
BmgT120I GGNCC 3 cut(s) 272, 391, 806
BmiI GGNNCC 5 cut(s) 99, 226, 1038, 1191, 1416
BmrFI CCNGG 3 cut(s) 309, 738, 739
BmsI GCATC 2 cut(s) 1210, 1375
BmtI GCTAGC 1 cut(s) 1656
BpiI GAAGAC 1 cut(s) 771
Bpu10I CCTNAGC 1 cut(s) 1599
BpuMI CCSGG 2 cut(s) 738, 739
Bsa29I ATCGAT 1 cut(s) 1569
BsaJI CCNNGG 5 cut(s) 307, 394, 737, 910, 1021
BsaWI WCCGGW 2 cut(s) 1108, 1417
BsaXI ACNNNNNCTCC 8 cut(s) 401, 431, 648, 678, 1090, 1120, 1470, 1500
Bsc4I CCNNNNNNNGG 3 cut(s) 426, 738, 1026
Bse3DI GCAATG 2 cut(s) 846, 1645
BseAI TCCGGA 2 cut(s) 1108, 1417
BseBI CCWGG 1 cut(s) 309
BseCI ATCGAT 1 cut(s) 1569
BseDI CCNNGG 5 cut(s) 307, 394, 737, 910, 1021
BseGI GGATG 3 cut(s) 763, 830, 1031
BseLI CCNNNNNNNGG 3 cut(s) 426, 738, 1026
BseMI GCAATG 2 cut(s) 846, 1645
BseXI GCAGC 5 cut(s) 263, 863, 896, 979, 1007
BseYI CCCAGC 2 cut(s) 199, 1503
Bsh1236I CGCG 1 cut(s) 294
BshFI GGCC 2 cut(s) 70, 1288
BshNI GGYRCC 2 cut(s) 224, 1189
BshVI ATCGAT 1 cut(s) 1569
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 3 cut(s) 738, 1109, 1418
BslFI GGGAC 2 cut(s) 101, 782
BslI CCNNNNNNNGG 3 cut(s) 426, 738, 1026
BsmAI GTCTC 2 cut(s) 651, 1460
BsmBI CGTCTC 1 cut(s) 1460
BsmFI GGGAC 2 cut(s) 101, 782
BsnI GGCC 2 cut(s) 70, 1288
BsoBI CYCGRG 1 cut(s) 737
Bsp13I TCCGGA 2 cut(s) 1108, 1417
Bsp143I GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
BspACI CCGC 3 cut(s) 459, 462, 998
BspANI GGCC 2 cut(s) 70, 1288
BspDI ATCGAT 1 cut(s) 1569
BspEI TCCGGA 2 cut(s) 1108, 1417
BspFNI CGCG 1 cut(s) 294
BspLI GGNNCC 5 cut(s) 99, 226, 1038, 1191, 1416
BspMAI CTGCAG 2 cut(s) 886, 997
BspOI GCTAGC 1 cut(s) 1656
BspPI GGATC 7 cut(s) 294, 833, 859, 1031, 1044, 1409, 1422
BspT107I GGYRCC 2 cut(s) 224, 1189
BspTI CTTAAG 1 cut(s) 454
BsrDI GCAATG 2 cut(s) 846, 1645
BssECI CCNNGG 5 cut(s) 307, 394, 737, 910, 1021
BssMI GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
BssNAI GTATAC 1 cut(s) 709
BssT1I CCWWGG 2 cut(s) 910, 1021
Bst1107I GTATAC 1 cut(s) 709
Bst2UI CCWGG 1 cut(s) 309
Bst4CI ACNGT 3 cut(s) 106, 497, 1214
Bst6I CTCTTC 3 cut(s) 570, 1013, 1107
BstAFI CTTAAG 1 cut(s) 454
BstC8I GCNNGC 4 cut(s) 64, 68, 1595, 1654
BstDEI CTNAG 3 cut(s) 1197, 1367, 1599
BstF5I GGATG 3 cut(s) 763, 830, 1031
BstFNI CGCG 1 cut(s) 294
BstH2I RGCGCY 1 cut(s) 1511
BstHHI GCGC 2 cut(s) 1209, 1510
BstKTI GATC 9 cut(s) 289, 487, 516, 841, 867, 1039, 1128, 1405, 1417
BstMAI GTCTC 2 cut(s) 651, 1460
BstMBI GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
BstMWI GCNNNNNNNGC 4 cut(s) 59, 209, 459, 884
BstNI CCWGG 1 cut(s) 309
BstNSI RCATGY 1 cut(s) 1597
BstSCI CCNGG 3 cut(s) 307, 736, 737
BstSFI CTRYAG 5 cut(s) 339, 628, 882, 993, 1210
BstUI CGCG 1 cut(s) 294
BstV1I GCAGC 5 cut(s) 263, 863, 896, 979, 1007
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 4 cut(s) 838, 864, 1036, 1414
BstXI CCANNNNNNTGG 1 cut(s) 282
BstYI RGATCY 4 cut(s) 838, 864, 1036, 1414
BstZ17I GTATAC 1 cut(s) 709
Bsu15I ATCGAT 1 cut(s) 1569
BsuRI GGCC 2 cut(s) 70, 1288
BsuTUI ATCGAT 1 cut(s) 1569
BtgZI GCGATG 2 cut(s) 62, 275
BtsCI GGATG 3 cut(s) 763, 830, 1031
BtsI GCAGTG 1 cut(s) 879
BtsIMutI CAGTG 1 cut(s) 879
Cac8I GCNNGC 4 cut(s) 64, 68, 1595, 1654
CaiI CAGNNNCTG 1 cut(s) 1306
CfoI GCGC 2 cut(s) 1209, 1510
Cfr13I GGNCC 3 cut(s) 272, 391, 806
Cfr9I CCCGGG 1 cut(s) 737
ClaI ATCGAT 1 cut(s) 1569
CseI GACGC 2 cut(s) 1212, 1280
Csp6I GTAC 5 cut(s) 225, 279, 1048, 1371, 1495
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 6 cut(s) 282, 810, 875, 1534, 1594, 1614
CviQI GTAC 5 cut(s) 225, 279, 1048, 1371, 1495
DdeI CTNAG 3 cut(s) 1197, 1367, 1599
DpnI GATC 9 cut(s) 288, 486, 515, 840, 866, 1038, 1127, 1404, 1416
DpnII GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
DraI TTTAAA 1 cut(s) 622
EaeI YGGCCR 1 cut(s) 1286
Eam1104I CTCTTC 3 cut(s) 570, 1013, 1107
EarI CTCTTC 3 cut(s) 570, 1013, 1107
EciI GGCGGA 1 cut(s) 477
Eco130I CCWWGG 2 cut(s) 910, 1021
Eco47I GGWCC 3 cut(s) 272, 391, 806
Eco57I CTGAAG 2 cut(s) 737, 765
Eco88I CYCGRG 1 cut(s) 737
EcoO109I RGGNCCY 1 cut(s) 391
EcoRII CCWGG 1 cut(s) 307
EcoT14I CCWWGG 2 cut(s) 910, 1021
ErhI CCWWGG 2 cut(s) 910, 1021
Esp3I CGTCTC 1 cut(s) 1460
FaeI CATG 6 cut(s) 285, 813, 878, 1537, 1597, 1617
FalI AAGNNNNNCTT 4 cut(s) 142, 174, 1614, 1646
FaqI GGGAC 2 cut(s) 101, 782
FatI CATG 6 cut(s) 281, 809, 874, 1533, 1593, 1613
FbaI TGATCA 4 cut(s) 484, 513, 1125, 1402
FblI GTMKAC 2 cut(s) 123, 708
Fnu4HI GCNGC 6 cut(s) 252, 460, 852, 885, 993, 996
FokI GGATG 3 cut(s) 770, 817, 1038
Fsp4HI GCNGC 6 cut(s) 252, 460, 852, 885, 993, 996
FspBI CTAG 6 cut(s) 951, 1022, 1139, 1179, 1275, 1653
GlaI GCGC 2 cut(s) 1208, 1509
GluI GCNGC 6 cut(s) 252, 460, 852, 885, 993, 996
GsaI CCCAGC 2 cut(s) 203, 1507
HaeII RGCGCY 1 cut(s) 1511
HaeIII GGCC 2 cut(s) 70, 1288
HapII CCGG 3 cut(s) 738, 1109, 1418
HgaI GACGC 2 cut(s) 1212, 1280
HhaI GCGC 2 cut(s) 1209, 1510
Hin1II CATG 6 cut(s) 285, 813, 878, 1537, 1597, 1617
Hin6I GCGC 2 cut(s) 1207, 1508
HinP1I GCGC 2 cut(s) 1207, 1508
HindIII AAGCTT 4 cut(s) 451, 890, 1601, 1623
HpaII CCGG 3 cut(s) 738, 1109, 1418
HphI GGTGA 4 cut(s) 938, 1009, 1093, 1345
Hpy166II GTNNAC 9 cut(s) 124, 635, 678, 709, 749, 1017, 1048, 1483, 1645
Hpy188I TCNGA 7 cut(s) 140, 193, 381, 398, 784, 973, 1302
Hpy8I GTNNAC 9 cut(s) 124, 635, 678, 709, 749, 1017, 1048, 1483, 1645
HpyAV CCTTC 6 cut(s) 168, 239, 382, 1286, 1405, 1640
HpyCH4III ACNGT 3 cut(s) 106, 497, 1214
HpyCH4IV ACGT 1 cut(s) 1485
HpyCH4V TGCA 8 cut(s) 550, 813, 851, 884, 995, 1388, 1394, 1430
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 209, 459, 884
HpyF3I CTNAG 3 cut(s) 1197, 1367, 1599
HpySE526I ACGT 1 cut(s) 1485
Hsp92II CATG 6 cut(s) 285, 813, 878, 1537, 1597, 1617
HspAI GCGC 2 cut(s) 1207, 1508
Kpn2I TCCGGA 2 cut(s) 1108, 1417
KpnI GGTACC 1 cut(s) 228
Ksp22I TGATCA 4 cut(s) 484, 513, 1125, 1402
Kzo9I GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
LmnI GCTCC 1 cut(s) 1312
Lsp1109I GCAGC 5 cut(s) 263, 863, 896, 979, 1007
LweI GCATC 2 cut(s) 1210, 1375
MaeI CTAG 6 cut(s) 951, 1022, 1139, 1179, 1275, 1653
MaeII ACGT 1 cut(s) 1485
MaeIII GTNAC 3 cut(s) 181, 538, 590
MalI GATC 9 cut(s) 288, 486, 515, 840, 866, 1038, 1127, 1404, 1416
MboI GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
MboII GAAGA 8 cut(s) 182, 383, 587, 771, 995, 1000, 1124, 1244
MfeI CAATTG 2 cut(s) 345, 1406
MflI RGATCY 4 cut(s) 838, 864, 1036, 1414
MlsI TGGCCA 1 cut(s) 1288
MluNI TGGCCA 1 cut(s) 1288
MlyI GAGTC 1 cut(s) 999
MmeI TCCRAC 2 cut(s) 125, 1129
MnlI CCTC 5 cut(s) 70, 238, 263, 404, 1271
Mox20I TGGCCA 1 cut(s) 1288
MroI TCCGGA 2 cut(s) 1108, 1417
MroXI GAANNNNTTC 4 cut(s) 375, 674, 791, 1296
MscI TGGCCA 1 cut(s) 1288
MseI TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
Msp20I TGGCCA 1 cut(s) 1288
MspA1I CMGCKG 2 cut(s) 203, 998
MspCI CTTAAG 1 cut(s) 454
MspI CCGG 3 cut(s) 738, 1109, 1418
MspR9I CCNGG 3 cut(s) 309, 738, 739
MunI CAATTG 2 cut(s) 345, 1406
MvaI CCWGG 1 cut(s) 309
MvnI CGCG 1 cut(s) 294
MwoI GCNNNNNNNGC 4 cut(s) 59, 209, 459, 884
NciI CCSGG 2 cut(s) 738, 739
NdeII GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
NheI GCTAGC 1 cut(s) 1652
NlaIII CATG 6 cut(s) 285, 813, 878, 1537, 1597, 1617
NlaIV GGNNCC 5 cut(s) 99, 226, 1038, 1191, 1416
NmuCI GTSAC 1 cut(s) 538
NspI RCATGY 1 cut(s) 1597
PaeI GCATGC 1 cut(s) 1597
PdmI GAANNNNTTC 4 cut(s) 375, 674, 791, 1296
PfeI GAWTC 9 cut(s) 129, 350, 404, 414, 598, 936, 974, 1152, 1576
PflMI CCANNNNNTGG 1 cut(s) 426
PkrI GCNGC 6 cut(s) 253, 461, 853, 886, 994, 997
PleI GAGTC 1 cut(s) 999
PpsI GAGTC 1 cut(s) 999
PpuMI RGGWCCY 1 cut(s) 391
PshBI ATTAAT 1 cut(s) 684
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 1 cut(s) 307
PspFI CCCAGC 2 cut(s) 199, 1503
PspGI CCWGG 1 cut(s) 307
PspN4I GGNNCC 5 cut(s) 99, 226, 1038, 1191, 1416
PspPI GGNCC 3 cut(s) 272, 391, 806
PspPPI RGGWCCY 1 cut(s) 391
PstI CTGCAG 2 cut(s) 886, 997
PstNI CAGNNNCTG 1 cut(s) 1306
PsuI RGATCY 4 cut(s) 838, 864, 1036, 1414
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 5 cut(s) 226, 280, 1049, 1372, 1496
RsaNI GTAC 5 cut(s) 225, 279, 1048, 1371, 1495
SaqAI TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
SatI GCNGC 6 cut(s) 252, 460, 852, 885, 993, 996
Sau3AI GATC 9 cut(s) 286, 484, 513, 838, 864, 1036, 1125, 1402, 1414
Sau96I GGNCC 3 cut(s) 272, 391, 806
SchI GAGTC 1 cut(s) 999
ScrFI CCNGG 3 cut(s) 309, 738, 739
SfaNI GCATC 2 cut(s) 1210, 1375
SfcI CTRYAG 5 cut(s) 339, 628, 882, 993, 1210
SinI GGWCC 3 cut(s) 272, 391, 806
SmaI CCCGGG 1 cut(s) 739
SmlI CTYRAG 1 cut(s) 454
SmoI CTYRAG 1 cut(s) 454
SphI GCATGC 1 cut(s) 1597
SsiI CCGC 3 cut(s) 459, 462, 998
SspMI CTAG 6 cut(s) 951, 1022, 1139, 1179, 1275, 1653
StyD4I CCNGG 3 cut(s) 307, 736, 737
StyI CCWWGG 2 cut(s) 910, 1021
TaaI ACNGT 3 cut(s) 106, 497, 1214
TaiI ACGT 1 cut(s) 1488
TaqI TCGA 6 cut(s) 11, 75, 168, 1011, 1515, 1569
TatI WGTACW 1 cut(s) 278
TauI GCSGC 1 cut(s) 462
TfiI GAWTC 9 cut(s) 129, 350, 404, 414, 598, 936, 974, 1152, 1576
Tru1I TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
Tru9I TTAA 6 cut(s) 149, 455, 468, 621, 666, 684
TscAI CASTG 1 cut(s) 886
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 5 cut(s) 251, 851, 884, 992, 995
Tsp45I GTSAC 1 cut(s) 538
TspDTI ATGAA 6 cut(s) 150, 342, 401, 732, 819, 1085
TspGWI ACGGA 4 cut(s) 46, 141, 1065, 1388
TspMI CCCGGG 1 cut(s) 737
TspRI CASTG 1 cut(s) 886
Van91I CCANNNNNTGG 1 cut(s) 426
Vha464I CTTAAG 1 cut(s) 454
VpaK11BI GGWCC 3 cut(s) 272, 391, 806
VspI ATTAAT 1 cut(s) 684
XapI RAATTY 6 cut(s) 112, 145, 260, 815, 1119, 1254
XbaI TCTAGA 2 cut(s) 950, 1138
XceI RCATGY 1 cut(s) 1597
XmaI CCCGGG 1 cut(s) 737
XmaJI CCTAGG 1 cut(s) 1021
XmiI GTMKAC 2 cut(s) 123, 708
XmnI GAANNNNTTC 4 cut(s) 375, 674, 791, 1296
XspI CTAG 6 cut(s) 951, 1022, 1139, 1179, 1275, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.