MD06G1145700.v1.1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
28820730 .. 28828121
7392 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1145700.v1.1.491

Sequence Viewer

Length: 2019 bp
ATGAGCTACTTTATACTCAATAAATTGGGCCAGTCCATTTCCTCTTTCGTTTTTCACGATGATTTCTCCTCTCTCCCCCACCTCTCTCTCTCCATCTCTCTTCTGCATGCAAGCATCAGACGATTCAAGCCATATTTCTCAGGAAGCTTAAGTGGCGGAATTAACCAAGAGGGTATTGATCACTACAATTGCTTGATCGATGAACTAATAAAAAATGGCATCACACCTTTCGTGACGATTTATCGCTTTGACATGCCGCTAGCCCTGGAAGAGAAGTATGGAGGCTTACTAAATCGCTCATTCGTGCATGAAACAATCAGAGGCCTTATTTCCGTAGCTGTTCAGAATGGGTGGTTTCTACACCAACTTGATGTCAAGTCAGCTTTCCTAAATGGAGTCCTAAAAGAAGAGGTGTTCGTTGATCAACCTCAAGGATTTGTTCTCAAAGGACAAGAGCACAAGGTGTATAAGCTTAAGAAGGCACTTTATGGCCTGAAACAAGCTCCAAAAGCATGGTATGGAGAGATCGACTCATATTTCAATGAAAGAGGTTTTCAAAGAAGTGAGAATGAACCTGCCCTCTATGTCAAAACTGAAGCGACTAGACCCGATATTATGTATGCTGCAAGCTTGTTGTCCAGATTTATGCACAAGCCTACTTGCATTCACTATGGAGCTGCAAAGAGGATCCTAAGATACATACAAGGTACACTTGACTTTGGTATTATGTATGAAAGGAATGTTAAGCCCAAATTGTATGGGTTCTGTGATAGTGACTGGGGAGGTAATGTGGATGACTTGAAAAGCACATCTGGCTATACTTTTACACTAGGGACTGGTGTATTCTCTTGGGCATCTAAGAAACATAAATCAGTTGCACTATCAACGGCAGAGGCTGAGTATGTGTCGACTTCAATTGCAACTTCTCAAGCAGTGTGGCTGAGAAGAATTATGCAAGATTTTGGTGAGAAACAAGAATCAGCAACTCATATCCTTTGTGACAATAAGTCAGCTATTGCCATGAGCAAGAATCCTATCTGTCATGGTAAATCAAAGCATATTGCTCTGAAGCATCACTACATCAGAGGTGGTGTGGAAGACAAGGAAGTGGATGTGGTCTACTGCAAGACAGAAGATCAAGTTGCTGATATCTTCACCAAGGCATTACCAAAGGACAGATTCATCTACCTAAGAGAACTTTTGGGAATGAAGCAGCAAAGCATTAAGAGGGAGTACTATAGCGATCTTTTATTCAAAAAATTTGGAGACAGAGTTAAACATTGGTTCACAATTAATGAGCCAAACGTTCTTGCTCAATATGGTTATGAACTTGGGATTTCCCCACCAGGGAGGTGTTCACTTCCATCAACCCCTTGTGCATTAGGGCCTCCTTTGAAATGTTGGGAAACCGTCAGTCCATGCAAGTTTGGTGGTAACTCGTCAACAGAACCTTACCTTGCAGCCCATAACATAATCATTGCCCATGCCACTATGGCTAAGCTCTACAGAGAAAAATATCAAGAACAACAAAAGGGTGAAGTTGGAATCGTCCTTGTTTCACAATATTTTTTGCCATATACACAATCAGAAGAAGATAAAACCGCAGCAGGAAGACTTTTTGACTTCTACCTTGGATGGTTTATGGGACCATTAGTATTCGGAGATTATCCACAAAGTATGAGAGAGAGGGTGAAGGAGAGGCTTCCCACTTTTCTTGCAGAAGAGAAAGTTCTGCTCAATGGGAGTTTAGGGTTCGTTGGAATCAATTATTATACATCTACGTATGCCAAACATAAGGCTCCTCCTCCAGGTGAGGCGTTGCGTTATTCCTTCGATATATGGGCCGAAAACAATAGGAATGGAGTGAATGTCAAAGGGTACTTTTATTGGGCTCTGTTCGACGATTTTGAATGGGGTATGGGGTTCGAACGTTATGGGATTTACTTTGTTGATTTCAATAACTACACGTGCTACCCCAAGCTCTCTGTTAAGTGGTTACGAGCTTTCCTTCAAGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

673

Amino Acids

76.76

Weight (kDa)

8.7

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 51 - 103 1.3e-13 Glycosyl hydrolase family 1
RVT_2 PF07727 103 - 199 8.4e-31 Reverse transcriptase (RNA-dependent DNA polymerase)
Glyco_hydro_1 PF00232 411 - 601 2.1e-39 Glycosyl hydrolase family 1
Glyco_hydro_1 PF00232 617 - 669 3.9e-10 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000392)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25630 AT2G44450 AT2G44450 AT3G60130 AT3G60130 AT3G60130 AT5G42260 AT5G44640
fragaria_vesca FvH4_5g07160 FvH4_5g07180 FvH4_5g07811 FvH4_5g07831 FvH4_5g07831 FvH4_5g07832 FvH4_6g19950 FvH4_6g19950 FvH4_6g19950
malus_domestica MD01G1120900.v1.1 MD06G1144600.v1.1 MD06G1144800.v1.1 MD06G1145700.v1.1 MD06G1146100.v1.1 MD06G1147000.v1.1 MD08G1072600.v1.1 MD08G1142300.v1.1 MD08G1191100.v1.1 MD14G1159400.v1.1 MD14G1160300.v1.1 MD14G1160600.v1.1 MD14G1160700.v1.1 MD14G1161400.v1.1
prunus_persica Prupe.1G525400_v2.0.a1 Prupe.1G583900_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G153200_v2.0.a1 Prupe.5G156500_v2.0.a1
pyrus_communis pycom06g13390 pycom06g13520 pycom06g13560 pycom06g13640 pycom08g12030 pycom14g13310 pycom14g13430
rosa_chinensis RchiOBHm_Chr3g0475401 RchiOBHm_Chr7g0190551 RchiOBHm_Chr7g0190631 RchiOBHm_Chr7g0190641 RchiOBHm_Chr7g0191241 RchiOBHm_Chr7g0191251 RchiOBHm_Chr7g0191261 RchiOBHm_Chr7g0202591
rosa_laevigata RLG00000004507 RLG00000004508 RLG00000004516 RLG00000023846 RLG00000035079
rosa_multiflora Rmu_co8005672.1_g000001 Rmu_co8018538.1_g000001 Rmu_sc0000526.1_g000002 Rmu_sc0001786.1_g000011 Rmu_sc0006709.1_g000007 Rmu_sc0006709.1_g000008 Rmu_sc0016637.1_g000004
rosa_roxburghii Rroxscaffold_1G00018560 Rroxscaffold_1G00024050 Rroxscaffold_3G00264440 Rroxscaffold_3G00264450 Rroxscaffold_4G00306640 Rroxscaffold_6G00406340
rosa_rugosa Rorug03G0295600 Rorug05G0298500 Rorug06G0072900 Rorug06G0505100 Rorug06G0505800 Rorug06G0505900 Rorug06G0506000
rosa_samantha Rh1CG344200 Rh2AG107900 Rh3AG198700 Rh3CG223000 Rh5AG369500 Rh5BG469700 Rh5BG469800 Rh5DG483000 Rh7AG111700 Rh7AG112400 Rh7AG112500 Rh7AG112600 Rh7CG116400 Rh7CG117400 Rh7CG117500 Rh7CG117600 Rh7CG122100 Rh7CG122200 Rh7DG115600 Rh7DG116400 Rh7DG116500
rosa_wichuraiana Rw3G018030 Rw7G009740 Rw7G009810 Rw7G009820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 583
AccI GTMKAC 2 cut(s) 908, 1119
AciI CCGC 3 cut(s) 156, 257, 1602
AclI AACGTT 2 cut(s) 1305, 1930
AclWI GGATC 2 cut(s) 682, 695
AcsI RAATTY 1 cut(s) 1259
AcuI CTGAAG 2 cut(s) 615, 1088
AcvI CACGTG 1 cut(s) 1968
AdeI CACNNNGTG 1 cut(s) 463
AfaI GTAC 3 cut(s) 709, 1235, 1880
AfiI CCNNNNNNNGG 2 cut(s) 1347, 1808
AflII CTTAAG 2 cut(s) 148, 473
AflIII ACRYGT 1 cut(s) 1965
AhdI GACNNNNNGTC 1 cut(s) 1006
AjnI CCWGG 3 cut(s) 264, 1345, 1807
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 1 cut(s) 1260
AlwI GGATC 2 cut(s) 682, 695
AlwNI CAGNNNCTG 1 cut(s) 896
AoxI GGCC 5 cut(s) 28, 322, 490, 1385, 1842
ApeKI GCWGC 5 cut(s) 623, 677, 1213, 1460, 1604
ApoI RAATTY 1 cut(s) 1259
AseI ATTAAT 1 cut(s) 1293
AspS9I GGNCC 4 cut(s) 28, 1385, 1646, 1842
AsuHPI GGTGA 5 cut(s) 977, 1147, 1547, 1702, 1823
AsuII TTCGAA 1 cut(s) 1926
AsuNHI GCTAGC 1 cut(s) 259
AvaII GGWCC 1 cut(s) 1646
BamHI GGATCC 1 cut(s) 687
BanII GRGCYC 1 cut(s) 1894
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbrPI CACGTG 1 cut(s) 1968
BbsI GAAGAC 2 cut(s) 1104, 1618
Bbv12I GWGCWC 1 cut(s) 459
BbvI GCAGC 5 cut(s) 610, 664, 1225, 1472, 1616
BccI CCATC 3 cut(s) 101, 1372, 1629
BceAI ACGGC 1 cut(s) 903
BciT130I CCWGG 3 cut(s) 266, 1347, 1809
BclI TGATCA 2 cut(s) 178, 421
BcoDI GTCTC 1 cut(s) 1260
BfaI CTAG 3 cut(s) 260, 603, 830
BfmI CTRYAG 2 cut(s) 1237, 1504
BfrI CTTAAG 2 cut(s) 148, 473
BfuAI ACCTGC 1 cut(s) 583
BglI GCCNNNNNGGC 1 cut(s) 1493
BisI GCNGC 6 cut(s) 257, 624, 678, 1214, 1461, 1605
BlpI GCTNAGC 1 cut(s) 1497
BlsI GCNGC 6 cut(s) 258, 625, 679, 1215, 1462, 1606
BmcAI AGTACT 1 cut(s) 1235
Bme1390I CCNGG 3 cut(s) 266, 1347, 1809
Bme18I GGWCC 1 cut(s) 1646
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmgT120I GGNCC 4 cut(s) 28, 1385, 1646, 1842
BmiI GGNNCC 3 cut(s) 689, 1647, 1800
BmrFI CCNGG 3 cut(s) 266, 1347, 1809
BmrI ACTGGG 1 cut(s) 787
BmsI GCATC 4 cut(s) 123, 228, 863, 1081
BmtI GCTAGC 1 cut(s) 263
BmuI ACTGGG 1 cut(s) 787
BpiI GAAGAC 2 cut(s) 1104, 1618
BplI GAGNNNNNCTC 2 cut(s) 515, 547
BpmI CTGGAG 1 cut(s) 1791
Bpu1102I GCTNAGC 1 cut(s) 1497
Bpu14I TTCGAA 1 cut(s) 1926
BpuEI CTTGAG 2 cut(s) 414, 912
Bsa29I ATCGAT 1 cut(s) 198
BsaAI YACGTR 2 cut(s) 1782, 1968
BsaJI CCNNGG 4 cut(s) 264, 1158, 1346, 1630
BsaXI ACNNNNNCTCC 6 cut(s) 774, 804, 1257, 1287, 1854, 1884
Bsc4I CCNNNNNNNGG 2 cut(s) 1347, 1808
Bse1I ACTGG 3 cut(s) 31, 782, 841
Bse3DI GCAATG 1 cut(s) 1476
BseBI CCWGG 3 cut(s) 266, 1347, 1809
BseCI ATCGAT 1 cut(s) 198
BseDI CCNNGG 4 cut(s) 264, 1158, 1346, 1630
BseGI GGATG 3 cut(s) 799, 1117, 1640
BseLI CCNNNNNNNGG 2 cut(s) 1347, 1808
BseMI GCAATG 1 cut(s) 1476
BseMII CTCAG 3 cut(s) 153, 888, 932
BseNI ACTGG 3 cut(s) 31, 782, 841
BseRI GAGGAG 3 cut(s) 58, 1791, 1794
BseXI GCAGC 5 cut(s) 610, 664, 1225, 1472, 1616
BshFI GGCC 5 cut(s) 30, 324, 492, 1387, 1844
BshVI ATCGAT 1 cut(s) 198
BsiHKAI GWGCWC 1 cut(s) 459
BslFI GGGAC 2 cut(s) 847, 1659
BslI CCNNNNNNNGG 2 cut(s) 1347, 1808
BsmAI GTCTC 1 cut(s) 1260
BsmFI GGGAC 2 cut(s) 847, 1659
BsmI GAATGC 1 cut(s) 663
BsnI GGCC 5 cut(s) 30, 324, 492, 1387, 1844
Bsp119I TTCGAA 1 cut(s) 1926
Bsp1286I GDGCHC 2 cut(s) 459, 1894
Bsp143I GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
Bsp1720I GCTNAGC 1 cut(s) 1497
BspACI CCGC 3 cut(s) 156, 257, 1602
BspANI GGCC 5 cut(s) 30, 324, 492, 1387, 1844
BspCNI CTCAG 3 cut(s) 152, 889, 933
BspDI ATCGAT 1 cut(s) 198
BspLI GGNNCC 3 cut(s) 689, 1647, 1800
BspMI ACCTGC 1 cut(s) 583
BspOI GCTAGC 1 cut(s) 263
BspPI GGATC 2 cut(s) 682, 695
BspT104I TTCGAA 1 cut(s) 1926
BspTI CTTAAG 2 cut(s) 148, 473
BsrDI GCAATG 1 cut(s) 1476
BsrI ACTGG 3 cut(s) 31, 782, 841
BssECI CCNNGG 4 cut(s) 264, 1158, 1346, 1630
BssMI GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
BssT1I CCWWGG 2 cut(s) 1158, 1630
Bst2UI CCWGG 3 cut(s) 266, 1347, 1809
Bst4CI ACNGT 1 cut(s) 1411
Bst6I CTCTTC 4 cut(s) 105, 264, 402, 1716
BstAFI CTTAAG 2 cut(s) 148, 473
BstBAI YACGTR 2 cut(s) 1782, 1968
BstBI TTCGAA 1 cut(s) 1926
BstC8I GCNNGC 4 cut(s) 108, 112, 261, 628
BstDEI CTNAG 7 cut(s) 139, 692, 858, 897, 941, 1190, 1497
BstENI CCTNNNNNAGG 1 cut(s) 1806
BstF5I GGATG 3 cut(s) 799, 1117, 1640
BstKTI GATC 7 cut(s) 181, 198, 424, 528, 690, 1138, 1246
BstMAI GTCTC 1 cut(s) 1260
BstMBI GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
BstMWI GCNNNNNNNGC 4 cut(s) 153, 509, 813, 1493
BstNI CCWGG 3 cut(s) 266, 1347, 1809
BstNSI RCATGY 2 cut(s) 110, 256
BstSCI CCNGG 3 cut(s) 264, 1345, 1807
BstSFI CTRYAG 2 cut(s) 1237, 1504
BstSNI TACGTA 1 cut(s) 1782
BstV1I GCAGC 5 cut(s) 610, 664, 1225, 1472, 1616
BstV2I GAAGAC 2 cut(s) 1104, 1618
BstX2I RGATCY 1 cut(s) 687
BstXI CCANNNNNNTGG 1 cut(s) 513
BstYI RGATCY 1 cut(s) 687
Bsu15I ATCGAT 1 cut(s) 198
BsuRI GGCC 5 cut(s) 30, 324, 492, 1387, 1844
BsuTUI ATCGAT 1 cut(s) 198
BtsCI GGATG 3 cut(s) 799, 1117, 1640
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 1 cut(s) 939
BveI ACCTGC 1 cut(s) 583
Cac8I GCNNGC 4 cut(s) 108, 112, 261, 628
CaiI CAGNNNCTG 1 cut(s) 896
Cfr13I GGNCC 4 cut(s) 28, 1385, 1646, 1842
ClaI ATCGAT 1 cut(s) 198
Csp6I GTAC 3 cut(s) 708, 1234, 1879
CspCI CAANNNNNGTGG 6 cut(s) 917, 952, 1411, 1446, 1696, 1731
CviAII CATG 8 cut(s) 107, 253, 308, 513, 1021, 1043, 1419, 1484
CviQI GTAC 3 cut(s) 708, 1234, 1879
DdeI CTNAG 7 cut(s) 139, 692, 858, 897, 941, 1190, 1497
DpnI GATC 7 cut(s) 180, 197, 423, 527, 689, 1137, 1245
DpnII GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
DraIII CACNNNGTG 1 cut(s) 463
DriI GACNNNNNGTC 1 cut(s) 1006
Eam1104I CTCTTC 4 cut(s) 105, 264, 402, 1716
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 4 cut(s) 105, 264, 402, 1716
EciI GGCGGA 1 cut(s) 171
Eco105I TACGTA 1 cut(s) 1782
Eco130I CCWWGG 2 cut(s) 1158, 1630
Eco147I AGGCCT 1 cut(s) 324
Eco24I GRGCYC 1 cut(s) 1894
Eco32I GATATC 1 cut(s) 1150
Eco47I GGWCC 1 cut(s) 1646
Eco57I CTGAAG 2 cut(s) 615, 1088
Eco72I CACGTG 1 cut(s) 1968
EcoNI CCTNNNNNAGG 1 cut(s) 1806
EcoO109I RGGNCCY 1 cut(s) 1385
EcoRII CCWGG 3 cut(s) 264, 1345, 1807
EcoRV GATATC 1 cut(s) 1150
EcoT14I CCWWGG 2 cut(s) 1158, 1630
EcoT38I GRGCYC 1 cut(s) 1894
ErhI CCWWGG 2 cut(s) 1158, 1630
FaeI CATG 8 cut(s) 110, 256, 311, 516, 1024, 1046, 1422, 1487
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 2 cut(s) 847, 1659
FatI CATG 8 cut(s) 106, 252, 307, 512, 1020, 1042, 1418, 1483
FbaI TGATCA 2 cut(s) 178, 421
FblI GTMKAC 2 cut(s) 908, 1119
Fnu4HI GCNGC 6 cut(s) 257, 624, 678, 1214, 1461, 1605
FokI GGATG 3 cut(s) 806, 1124, 1647
FriOI GRGCYC 1 cut(s) 1894
Fsp4HI GCNGC 6 cut(s) 257, 624, 678, 1214, 1461, 1605
FspBI CTAG 3 cut(s) 260, 603, 830
GluI GCNGC 6 cut(s) 257, 624, 678, 1214, 1461, 1605
GsuI CTGGAG 1 cut(s) 1791
HaeIII GGCC 5 cut(s) 30, 324, 492, 1387, 1844
Hin1II CATG 8 cut(s) 110, 256, 311, 516, 1024, 1046, 1422, 1487
HincII GTYRAC 2 cut(s) 909, 1443
HindII GTYRAC 2 cut(s) 909, 1443
HindIII AAGCTT 3 cut(s) 145, 470, 628
HinfI GANTC 8 cut(s) 123, 396, 530, 977, 1030, 1179, 1545, 1761
HphI GGTGA 5 cut(s) 977, 1147, 1547, 1702, 1823
Hpy166II GTNNAC 6 cut(s) 710, 909, 1120, 1287, 1358, 1443
Hpy188I TCNGA 7 cut(s) 119, 320, 345, 1068, 1085, 1588, 1661
Hpy188III TCNNGA 5 cut(s) 56, 141, 232, 639, 1520
Hpy8I GTNNAC 6 cut(s) 710, 909, 1120, 1287, 1358, 1443
Hpy99I CGWCG 1 cut(s) 1904
HpyAV CCTTC 4 cut(s) 472, 1687, 1840, 2018
HpyCH4III ACNGT 1 cut(s) 1411
HpyCH4IV ACGT 4 cut(s) 1305, 1781, 1930, 1967
HpyF10VI GCNNNNNNNGC 4 cut(s) 153, 509, 813, 1493
HpyF3I CTNAG 7 cut(s) 139, 692, 858, 897, 941, 1190, 1497
HpySE526I ACGT 4 cut(s) 1305, 1781, 1930, 1967
Hsp92II CATG 8 cut(s) 110, 256, 311, 516, 1024, 1046, 1422, 1487
Ksp22I TGATCA 2 cut(s) 178, 421
Kzo9I GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
LmnI GCTCC 3 cut(s) 508, 674, 1804
Lsp1109I GCAGC 5 cut(s) 610, 664, 1225, 1472, 1616
LweI GCATC 4 cut(s) 123, 228, 863, 1081
MaeI CTAG 3 cut(s) 260, 603, 830
MaeII ACGT 4 cut(s) 1305, 1781, 1930, 1967
MaeIII GTNAC 5 cut(s) 232, 773, 998, 1433, 1995
MalI GATC 7 cut(s) 180, 197, 423, 527, 689, 1137, 1245
MboI GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
MfeI CAATTG 2 cut(s) 187, 915
MflI RGATCY 1 cut(s) 687
MhlI GDGCHC 2 cut(s) 459, 1894
MluCI AATT 9 cut(s) 23, 159, 187, 752, 915, 948, 1259, 1290, 1765
MlyI GAGTC 2 cut(s) 405, 524
MmeI TCCRAC 2 cut(s) 1522, 1738
MseI TTAA 8 cut(s) 149, 162, 474, 744, 1224, 1275, 1293, 1989
MspCI CTTAAG 2 cut(s) 148, 473
MspR9I CCNGG 3 cut(s) 266, 1347, 1809
MunI CAATTG 2 cut(s) 187, 915
Mva1269I GAATGC 1 cut(s) 663
MvaI CCWGG 3 cut(s) 266, 1347, 1809
MwoI GCNNNNNNNGC 4 cut(s) 153, 509, 813, 1493
NdeII GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
NheI GCTAGC 1 cut(s) 259
NlaIII CATG 8 cut(s) 110, 256, 311, 516, 1024, 1046, 1422, 1487
NlaIV GGNNCC 3 cut(s) 689, 1647, 1800
NmuCI GTSAC 3 cut(s) 232, 773, 998
NspI RCATGY 2 cut(s) 110, 256
NspV TTCGAA 1 cut(s) 1926
PaeI GCATGC 1 cut(s) 110
PceI AGGCCT 1 cut(s) 324
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PctI GAATGC 1 cut(s) 663
PfeI GAWTC 6 cut(s) 123, 977, 1030, 1179, 1545, 1761
PkrI GCNGC 6 cut(s) 258, 625, 679, 1215, 1462, 1606
PleI GAGTC 2 cut(s) 404, 524
PmaCI CACGTG 1 cut(s) 1968
PmlI CACGTG 1 cut(s) 1968
PpsI GAGTC 2 cut(s) 404, 524
Ppu21I YACGTR 2 cut(s) 1782, 1968
PshBI ATTAAT 1 cut(s) 1293
Psp1406I AACGTT 2 cut(s) 1305, 1930
Psp6I CCWGG 3 cut(s) 264, 1345, 1807
PspCI CACGTG 1 cut(s) 1968
PspGI CCWGG 3 cut(s) 264, 1345, 1807
PspN4I GGNNCC 3 cut(s) 689, 1647, 1800
PspPI GGNCC 4 cut(s) 28, 1385, 1646, 1842
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 1 cut(s) 687
RsaI GTAC 3 cut(s) 709, 1235, 1880
RsaNI GTAC 3 cut(s) 708, 1234, 1879
SalI GTCGAC 1 cut(s) 907
SaqAI TTAA 8 cut(s) 149, 162, 474, 744, 1224, 1275, 1293, 1989
SatI GCNGC 6 cut(s) 257, 624, 678, 1214, 1461, 1605
Sau3AI GATC 7 cut(s) 178, 195, 421, 525, 687, 1135, 1243
Sau96I GGNCC 4 cut(s) 28, 1385, 1646, 1842
ScaI AGTACT 1 cut(s) 1235
SchI GAGTC 2 cut(s) 405, 524
ScrFI CCNGG 3 cut(s) 266, 1347, 1809
SduI GDGCHC 2 cut(s) 459, 1894
SfaNI GCATC 4 cut(s) 123, 228, 863, 1081
SfcI CTRYAG 2 cut(s) 1237, 1504
SfuI TTCGAA 1 cut(s) 1926
SinI GGWCC 1 cut(s) 1646
SmlI CTYRAG 4 cut(s) 148, 429, 473, 927
SmoI CTYRAG 4 cut(s) 148, 429, 473, 927
SnaBI TACGTA 1 cut(s) 1782
SphI GCATGC 1 cut(s) 110
Sse9I AATT 9 cut(s) 23, 159, 187, 752, 915, 948, 1259, 1290, 1765
SseBI AGGCCT 1 cut(s) 324
SsiI CCGC 3 cut(s) 156, 257, 1602
SspI AATATT 1 cut(s) 1565
SspMI CTAG 3 cut(s) 260, 603, 830
StuI AGGCCT 1 cut(s) 324
StyD4I CCNGG 3 cut(s) 264, 1345, 1807
StyI CCWWGG 2 cut(s) 1158, 1630
TaaI ACNGT 1 cut(s) 1411
TaiI ACGT 4 cut(s) 1308, 1784, 1933, 1970
TaqI TCGA 6 cut(s) 198, 528, 908, 1833, 1899, 1926
TasI AATT 9 cut(s) 23, 159, 187, 752, 915, 948, 1259, 1290, 1765
TatI WGTACW 1 cut(s) 1233
TauI GCSGC 1 cut(s) 259
TfiI GAWTC 6 cut(s) 123, 977, 1030, 1179, 1545, 1761
Tru1I TTAA 8 cut(s) 149, 162, 474, 744, 1224, 1275, 1293, 1989
Tru9I TTAA 8 cut(s) 149, 162, 474, 744, 1224, 1275, 1293, 1989
TscAI CASTG 1 cut(s) 939
TseFI GTSAC 3 cut(s) 232, 773, 998
TseI GCWGC 5 cut(s) 623, 677, 1213, 1460, 1604
Tsp45I GTSAC 3 cut(s) 232, 773, 998
TspDTI ATGAA 8 cut(s) 216, 324, 558, 585, 747, 1171, 1223, 1341
TspGWI ACGGA 1 cut(s) 322
TspRI CASTG 1 cut(s) 939
Vha464I CTTAAG 2 cut(s) 148, 473
VpaK11BI GGWCC 1 cut(s) 1646
VspI ATTAAT 1 cut(s) 1293
XagI CCTNNNNNAGG 1 cut(s) 1806
XapI RAATTY 1 cut(s) 1259
XceI RCATGY 2 cut(s) 110, 256
XmiI GTMKAC 2 cut(s) 908, 1119
XspI CTAG 3 cut(s) 260, 603, 830
ZrmI AGTACT 1 cut(s) 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.