FvH4_1g28610

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000349
Physical Location & Seq
Forward (+)
20899743 .. 20901977
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g28610.t1

Sequence Viewer

Length: 1341 bp
ATGGCCAAACGCATGAAAAGAACGCAACGCCGCCGCCGCCTCCAAAAGCAAAACCCTATGAACCACCTCCCGGAGGACCTCCTCCTCCACATCCTTTCTTTCTTCTCCACACTAGACGCCGTGCGAACCTCTTTAATATCCAAACAATGGAAATCTCTTTGGTCTCGCGTTCCCTCTTGCTTGTATTTCTCCTACCATCTCTTCCTCAAAACCAAGACCAACTCTTACGACCATGCTGAGATGTTTGCCGACACCGTCAACCGCGCCATCAACACTCGTCGATCTGCCATCCAAACCTTCAGCCTGTCCTTTATCTACGATTATGGCTGCATCCACCTAGTCGAAGACTGGTTACGCGCCGCCGTGACGCGCCTCCATGCTCGTGAGCTCCACTTGGACTTCTTCATCCACGAAGAGTATCACGAGAAAACGGTTCAAGATGATGAATTCGCAGATGATGATGAAACAAACTTTGACCTCACGTACGTGTTCCCTCTTTCTCTCCTGAACAATGCAGTCGTGCAAGTCTTGAGGCTCACGTATTGTATTCTTGAGTGGCCTGAAGACAACATGACGATGAGTCTTGGTTCGTTGAGGTCCATTTTTCTTGATATGATTTATCTGACGGACCTAAGTGTGCCGCTTTTGATTGAGTGGTGTCCCAATCTCGAAGAGCTGGAGCTTAAGAACATTCTGGGGTTGCGGAATTTGAGGATTATTAGCCCTAGGCTTAAGAAGGTCGCTCTTGGATATATTTGTGAGACTAAGAAGTACAGTTGCAAATCCATTGTGATTGATTGCCCTAACCTTTTGACGTTGAGGTTTCATGATTGTGACGCTGATAGGATTGTGCTTAAAAATGCGACTTCCGTAGTTGAGTTTGCTGTTGATTTCTCAGTTCTAGATGTTGAGAACTATCATGTATGGTGTAAAACTGCGCGCCTACTCAGGAAAGCGCGTAATGTTCAGAAGCTCAAGGTGATAAATTTGTGGTTTAAGCTTCTGACACCAGAGAATCTCTTCCCTAAAACTTTGAAGCTCCGTAATCTCAAATATCTAGAGCTTCGAACTGGATATACTCGATATGATCTGGTTGGCATGGCTGCATTGCTCGAACGTTGTCCCAATCTAGAGTCAATGGTTCTTAGTTCAATTTCCAAAATGGAAGAAGATGGAAGTTTAACAGAGGAGGTCTTGAATAAACCGATTGAATTCAAGATGCCAGCGCTTGAGCAAGTTAAGCTGCCATCGTATTCAGGTACGAGAGAAGAACGCAAGTTTCTGAAGATTTTGAGAGCACAAGGAATAGCCAGAGAGAAGATTGTACTTGATTCACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

447

Amino Acids

52.29

Weight (kDa)

8.75

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 20 - 53 4.2e-06 F-box-like
F-box PF00646 21 - 59 1.6e-09 F-box domain
LRR_At5g56370 PF24758 143 - 276 3.3e-09 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 158 - 396 2.7e-15 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 147
AccII CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
AciI CCGC 7 cut(s) 31, 34, 37, 262, 360, 641, 703
AclI AACGTT 1 cut(s) 1117
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 446, 706, 985, 1211
AcuI CTGAAG 3 cut(s) 283, 582, 1304
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 4 cut(s) 485, 773, 1261, 1326
AfeI AGCGCT 1 cut(s) 1227
AfiI CCNNNNNNNGG 3 cut(s) 70, 73, 147
AflII CTTAAG 2 cut(s) 683, 731
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 6 cut(s) 437, 1036, 1152, 1198, 1211, 1216
AhdI GACNNNNNGTC 1 cut(s) 579
AleI CACNNNNGTG 1 cut(s) 485
AluBI AGCT 8 cut(s) 388, 676, 682, 973, 1000, 1039, 1063, 1243
AluI AGCT 8 cut(s) 388, 676, 682, 973, 1000, 1039, 1063, 1243
Alw21I GWGCWC 2 cut(s) 390, 1300
Alw26I GTCTC 2 cut(s) 168, 755
Aor51HI AGCGCT 1 cut(s) 1227
AoxI GGCC 2 cut(s) 3, 557
ApeKI GCWGC 3 cut(s) 327, 1103, 1243
ApoI RAATTY 4 cut(s) 446, 706, 985, 1211
Asp700I GAANNNNTTC 1 cut(s) 1019
AspA2I CCTAGG 1 cut(s) 725
AspLEI GCGC 7 cut(s) 266, 359, 372, 940, 942, 958, 1228
AspS9I GGNCC 3 cut(s) 76, 597, 628
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 991
AsuII TTCGAA 1 cut(s) 1066
AvaII GGWCC 3 cut(s) 76, 597, 628
AvrII CCTAGG 1 cut(s) 725
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 390
BarI GAAGNNNNNNTAC 2 cut(s) 336, 368
BauI CACGAG 2 cut(s) 381, 422
BbsI GAAGAC 2 cut(s) 351, 570
Bbv12I GWGCWC 2 cut(s) 390, 1300
BbvI GCAGC 3 cut(s) 314, 1090, 1230
BccI CCATC 5 cut(s) 204, 275, 296, 1166, 1255
BceAI ACGGC 2 cut(s) 104, 347
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 2 cut(s) 168, 755
BfaI CTAG 6 cut(s) 113, 338, 726, 902, 1058, 1130
BfoI RGCGCY 1 cut(s) 1229
BfrI CTTAAG 2 cut(s) 683, 731
BisI GCNGC 8 cut(s) 31, 34, 37, 328, 360, 641, 1104, 1244
BlnI CCTAGG 1 cut(s) 725
BlsI GCNGC 8 cut(s) 32, 35, 38, 329, 361, 642, 1105, 1245
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 3 cut(s) 76, 597, 628
BmeRI GACNNNNNGTC 1 cut(s) 579
BmgT120I GGNCC 3 cut(s) 76, 597, 628
BmrFI CCNGG 1 cut(s) 71
BmsI GCATC 2 cut(s) 339, 1209
BpiI GAAGAC 2 cut(s) 351, 570
BpmI CTGGAG 1 cut(s) 698
Bpu14I TTCGAA 1 cut(s) 1066
BpuEI CTTGAG 4 cut(s) 550, 572, 959, 1250
BpuMI CCSGG 1 cut(s) 71
BsaAI YACGTR 3 cut(s) 483, 487, 540
BsaHI GRCGYC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 725
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 73, 147
Bse1I ACTGG 2 cut(s) 353, 1075
Bse3DI GCAATG 1 cut(s) 1106
BseDI CCNNGG 1 cut(s) 725
BseGI GGATG 4 cut(s) 90, 288, 330, 405
BseLI CCNNNNNNNGG 3 cut(s) 70, 73, 147
BseMI GCAATG 1 cut(s) 1106
BseMII CTCAG 3 cut(s) 228, 909, 961
BseNI ACTGG 2 cut(s) 353, 1075
BsePI GCGCGC 1 cut(s) 938
BseRI GAGGAG 3 cut(s) 71, 74, 1202
BseXI GCAGC 3 cut(s) 314, 1090, 1230
Bsh1236I CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
BshFI GGCC 2 cut(s) 5, 559
BsiHKAI GWGCWC 2 cut(s) 390, 1300
BsiSI CCGG 1 cut(s) 71
BsiWI CGTACG 1 cut(s) 483
BslFI GGGAC 2 cut(s) 645, 1107
BslI CCNNNNNNNGG 3 cut(s) 70, 73, 147
BsmAI GTCTC 2 cut(s) 168, 755
BsmFI GGGAC 2 cut(s) 645, 1107
BsnI GGCC 2 cut(s) 5, 559
Bso31I GGTCTC 1 cut(s) 168
Bsp119I TTCGAA 1 cut(s) 1066
Bsp1286I GDGCHC 2 cut(s) 390, 1300
Bsp143I GATC 2 cut(s) 281, 1087
BspACI CCGC 7 cut(s) 31, 34, 37, 262, 360, 641, 703
BspANI GGCC 2 cut(s) 5, 559
BspCNI CTCAG 3 cut(s) 229, 908, 960
BspFNI CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
BspHI TCATGA 1 cut(s) 826
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 1066
BspTI CTTAAG 2 cut(s) 683, 731
BspTNI GGTCTC 1 cut(s) 168
BsrDI GCAATG 1 cut(s) 1106
BsrI ACTGG 2 cut(s) 353, 1075
BssECI CCNNGG 1 cut(s) 725
BssHII GCGCGC 1 cut(s) 938
BssMI GATC 2 cut(s) 281, 1087
BssNI GRCGYC 1 cut(s) 117
BssSI CACGAG 2 cut(s) 381, 422
BssT1I CCWWGG 1 cut(s) 725
Bst2BI CACGAG 2 cut(s) 381, 422
Bst4CI ACNGT 3 cut(s) 256, 433, 776
Bst6I CTCTTC 4 cut(s) 206, 408, 666, 1025
BstACI GRCGYC 1 cut(s) 117
BstAFI CTTAAG 2 cut(s) 683, 731
BstBAI YACGTR 3 cut(s) 483, 487, 540
BstBI TTCGAA 1 cut(s) 1066
BstC8I GCNNGC 2 cut(s) 940, 1224
BstDEI CTNAG 6 cut(s) 237, 632, 765, 895, 947, 1145
BstENI CCTNNNNNAGG 1 cut(s) 71
BstF5I GGATG 4 cut(s) 90, 288, 330, 405
BstFNI CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
BstH2I RGCGCY 1 cut(s) 1229
BstHHI GCGC 7 cut(s) 266, 359, 372, 940, 942, 958, 1228
BstKTI GATC 2 cut(s) 284, 1090
BstMAI GTCTC 2 cut(s) 168, 755
BstMBI GATC 2 cut(s) 281, 1087
BstMWI GCNNNNNNNGC 2 cut(s) 36, 1240
BstSCI CCNGG 1 cut(s) 69
BstUI CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
BstV1I GCAGC 3 cut(s) 314, 1090, 1230
BstV2I GAAGAC 2 cut(s) 351, 570
BsuRI GGCC 2 cut(s) 5, 559
BtsCI GGATG 4 cut(s) 90, 288, 330, 405
Cac8I GCNNGC 2 cut(s) 940, 1224
CciI TCATGA 1 cut(s) 826
CfoI GCGC 7 cut(s) 266, 359, 372, 940, 942, 958, 1228
Cfr13I GGNCC 3 cut(s) 76, 597, 628
CseI GACGC 3 cut(s) 125, 376, 845
Csp6I GTAC 4 cut(s) 484, 772, 1260, 1325
CviAII CATG 7 cut(s) 13, 233, 377, 571, 827, 920, 1099
CviQI GTAC 4 cut(s) 484, 772, 1260, 1325
DdeI CTNAG 6 cut(s) 237, 632, 765, 895, 947, 1145
DpnI GATC 2 cut(s) 283, 1089
DpnII GATC 2 cut(s) 281, 1087
DriI GACNNNNNGTC 1 cut(s) 579
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 206, 408, 666, 1025
Eam1105I GACNNNNNGTC 1 cut(s) 579
EarI CTCTTC 4 cut(s) 206, 408, 666, 1025
Ecl136II GAGCTC 1 cut(s) 388
Eco130I CCWWGG 1 cut(s) 725
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 168
Eco47I GGWCC 3 cut(s) 76, 597, 628
Eco47III AGCGCT 1 cut(s) 1227
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 3 cut(s) 283, 582, 1304
EcoICRI GAGCTC 1 cut(s) 388
EcoNI CCTNNNNNAGG 1 cut(s) 71
EcoO109I RGGNCCY 1 cut(s) 76
EcoRI GAATTC 2 cut(s) 446, 1211
EcoT14I CCWWGG 1 cut(s) 725
EcoT38I GRGCYC 1 cut(s) 390
ErhI CCWWGG 1 cut(s) 725
FaeI CATG 7 cut(s) 16, 236, 380, 574, 830, 923, 1102
FaqI GGGAC 2 cut(s) 645, 1107
FatI CATG 7 cut(s) 12, 232, 376, 570, 826, 919, 1098
Fnu4HI GCNGC 8 cut(s) 31, 34, 37, 328, 360, 641, 1104, 1244
FokI GGATG 4 cut(s) 77, 275, 317, 392
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 8 cut(s) 31, 34, 37, 328, 360, 641, 1104, 1244
FspBI CTAG 6 cut(s) 113, 338, 726, 902, 1058, 1130
GlaI GCGC 7 cut(s) 265, 358, 371, 939, 941, 957, 1227
GluI GCNGC 8 cut(s) 31, 34, 37, 328, 360, 641, 1104, 1244
GsuI CTGGAG 1 cut(s) 698
HaeII RGCGCY 1 cut(s) 1229
HaeIII GGCC 2 cut(s) 5, 559
HapII CCGG 1 cut(s) 71
HgaI GACGC 3 cut(s) 125, 376, 845
HhaI GCGC 7 cut(s) 266, 359, 372, 940, 942, 958, 1228
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 7 cut(s) 16, 236, 380, 574, 830, 923, 1102
Hin6I GCGC 7 cut(s) 264, 357, 370, 938, 940, 956, 1226
HinP1I GCGC 7 cut(s) 264, 357, 370, 938, 940, 956, 1226
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 1 cut(s) 998
HinfI GANTC 4 cut(s) 580, 1015, 1133, 1331
HpaII CCGG 1 cut(s) 71
HphI GGTGA 1 cut(s) 991
Hpy166II GTNNAC 1 cut(s) 259
Hpy188I TCNGA 4 cut(s) 624, 969, 1005, 1284
Hpy8I GTNNAC 1 cut(s) 259
Hpy99I CGWCG 1 cut(s) 282
HpyAV CCTTC 2 cut(s) 307, 730
HpyCH4III ACNGT 3 cut(s) 256, 433, 776
HpyCH4IV ACGT 5 cut(s) 482, 486, 539, 815, 1117
HpyCH4V TGCA 5 cut(s) 330, 515, 523, 780, 1106
HpyF10VI GCNNNNNNNGC 2 cut(s) 36, 1240
HpyF3I CTNAG 6 cut(s) 237, 632, 765, 895, 947, 1145
HpySE526I ACGT 5 cut(s) 482, 486, 539, 815, 1117
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 7 cut(s) 16, 236, 380, 574, 830, 923, 1102
HspAI GCGC 7 cut(s) 264, 357, 370, 938, 940, 956, 1226
Kzo9I GATC 2 cut(s) 281, 1087
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 3 cut(s) 393, 679, 1044
Lsp1109I GCAGC 3 cut(s) 314, 1090, 1230
LweI GCATC 2 cut(s) 339, 1209
MaeI CTAG 6 cut(s) 113, 338, 726, 902, 1058, 1130
MaeII ACGT 5 cut(s) 482, 486, 539, 815, 1117
MaeIII GTNAC 3 cut(s) 351, 364, 833
MalI GATC 2 cut(s) 283, 1089
MboI GATC 2 cut(s) 281, 1087
MhlI GDGCHC 2 cut(s) 390, 1300
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 446, 706, 985, 1152, 1211
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 589, 1142
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 1019
MscI TGGCCA 1 cut(s) 5
MseI TTAA 7 cut(s) 134, 684, 732, 855, 996, 1181, 1239
MslI CAYNNNNRTG 4 cut(s) 381, 485, 575, 831
Msp20I TGGCCA 1 cut(s) 5
MspCI CTTAAG 2 cut(s) 683, 731
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 1 cut(s) 71
MvnI CGCG 6 cut(s) 168, 264, 357, 370, 940, 958
MwoI GCNNNNNNNGC 2 cut(s) 36, 1240
NciI CCSGG 1 cut(s) 71
NdeII GATC 2 cut(s) 281, 1087
NlaIII CATG 7 cut(s) 16, 236, 380, 574, 830, 923, 1102
NmuCI GTSAC 2 cut(s) 364, 833
NspV TTCGAA 1 cut(s) 1066
OliI CACNNNNGTG 1 cut(s) 485
PagI TCATGA 1 cut(s) 826
PauI GCGCGC 1 cut(s) 938
PciSI GCTCTTC 1 cut(s) 666
PdmI GAANNNNTTC 1 cut(s) 1019
PfeI GAWTC 2 cut(s) 1015, 1331
Pfl23II CGTACG 1 cut(s) 483
PflFI GACNNNGTC 1 cut(s) 254
PflMI CCANNNNNTGG 1 cut(s) 147
PfoI TCCNGGA 1 cut(s) 69
PkrI GCNGC 8 cut(s) 32, 35, 38, 329, 361, 642, 1105, 1245
PleI GAGTC 2 cut(s) 588, 1141
PpsI GAGTC 2 cut(s) 588, 1141
Ppu21I YACGTR 3 cut(s) 483, 487, 540
PpuMI RGGWCCY 1 cut(s) 76
Psp124BI GAGCTC 1 cut(s) 390
Psp1406I AACGTT 1 cut(s) 1117
Psp5II RGGWCCY 1 cut(s) 76
PspLI CGTACG 1 cut(s) 483
PspPI GGNCC 3 cut(s) 76, 597, 628
PspPPI RGGWCCY 1 cut(s) 76
PsrI GAACNNNNNNTAC 2 cut(s) 1060, 1092
PsyI GACNNNGTC 1 cut(s) 254
PteI GCGCGC 1 cut(s) 938
RsaI GTAC 4 cut(s) 485, 773, 1261, 1326
RsaNI GTAC 4 cut(s) 484, 772, 1260, 1325
RseI CAYNNNNRTG 4 cut(s) 381, 485, 575, 831
SacI GAGCTC 1 cut(s) 390
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 7 cut(s) 134, 684, 732, 855, 996, 1181, 1239
SatI GCNGC 8 cut(s) 31, 34, 37, 328, 360, 641, 1104, 1244
Sau3AI GATC 2 cut(s) 281, 1087
Sau96I GGNCC 3 cut(s) 76, 597, 628
SchI GAGTC 2 cut(s) 589, 1142
ScrFI CCNGG 1 cut(s) 71
SduI GDGCHC 2 cut(s) 390, 1300
SfaNI GCATC 2 cut(s) 339, 1209
SfuI TTCGAA 1 cut(s) 1066
SinI GGWCC 3 cut(s) 76, 597, 628
SmiMI CAYNNNNRTG 4 cut(s) 381, 485, 575, 831
SmlI CTYRAG 6 cut(s) 529, 551, 683, 731, 974, 1229
SmoI CTYRAG 6 cut(s) 529, 551, 683, 731, 974, 1229
Sse9I AATT 5 cut(s) 446, 706, 985, 1152, 1211
SsiI CCGC 7 cut(s) 31, 34, 37, 262, 360, 641, 703
SspMI CTAG 6 cut(s) 113, 338, 726, 902, 1058, 1130
SstI GAGCTC 1 cut(s) 390
StyD4I CCNGG 1 cut(s) 69
StyI CCWWGG 1 cut(s) 725
TaaI ACNGT 3 cut(s) 256, 433, 776
TaiI ACGT 5 cut(s) 485, 489, 542, 818, 1120
TaqI TCGA 6 cut(s) 280, 342, 669, 1066, 1081, 1113
TasI AATT 5 cut(s) 446, 706, 985, 1152, 1211
TatI WGTACW 2 cut(s) 771, 1324
TauI GCSGC 5 cut(s) 33, 36, 39, 362, 643
TfiI GAWTC 2 cut(s) 1015, 1331
Tru1I TTAA 7 cut(s) 134, 684, 732, 855, 996, 1181, 1239
Tru9I TTAA 7 cut(s) 134, 684, 732, 855, 996, 1181, 1239
TseFI GTSAC 2 cut(s) 364, 833
TseI GCWGC 3 cut(s) 327, 1103, 1243
Tsp45I GTSAC 2 cut(s) 364, 833
TspDTI ATGAA 6 cut(s) 29, 74, 394, 459, 477, 815
TspGWI ACGGA 3 cut(s) 641, 859, 1031
Tth111I GACNNNGTC 1 cut(s) 254
Van91I CCANNNNNTGG 1 cut(s) 147
Vha464I CTTAAG 2 cut(s) 683, 731
VpaK11BI GGWCC 3 cut(s) 76, 597, 628
XagI CCTNNNNNAGG 1 cut(s) 71
XapI RAATTY 4 cut(s) 446, 706, 985, 1211
XbaI TCTAGA 3 cut(s) 901, 1057, 1129
XmaJI CCTAGG 1 cut(s) 725
XmnI GAANNNNTTC 1 cut(s) 1019
XspI CTAG 6 cut(s) 113, 338, 726, 902, 1058, 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.