Rh2DG573500

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000349
Physical Location & Seq
Forward (+)
80329483 .. 80332095
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG573500.1

Sequence Viewer

Length: 1365 bp
ATGGAACAAGCCAGTGCTGAAATTCAAGTCCCAAATCCAAACCCTAGTCGAACCCTAAACGATCTCCCCGACGAAATCCTGATCCAAATCCTCTCCTTGATTCCGACCTTAGAGGCCATCCACAACTCTCTCGTCTCCCGCCAATGGCGATCCCTCTGGTCCCGTCTCCCCTTCCTCGACTTCTCCTACCACCTCTTCCCGGTCAACGACGCCGAACCTCTCCCCGTCACGAGCCACCGCTTCGCCGAGTTTGTCGACCGCGCTCTCATCCTCCGCCCCAATTCTCCGATCAAAACCTTCCGCCTCTCTTTCATCTTCTACTACTACTACACCTCCCACGTCGACTCTTGGGTGCGCTCCGCCGTCACGCGCTTCCGGGCGCGTGAGCTCGACCTCGACTTCTTCATCGACAAAGAGTACCATCTCCGGAGCGAGGAAGATCGAGCGCCGCGTGACAAGTATGATTTCCCTTTCTCTGTGCTGAGAAACGGGTGCGTTGAGAGTCTGAGGCTCACGTACGTTGATCTCGCGTTGCCGGCGAGCATGGCCACCGTGGGGATGAGCTCTGTGAGGTCGATGTTTCTTGAGGACGTGGATTTGACGGACCAGATGTGGGAGCGTTTGATTTTGGGGTGCCCCAATCTTGAGGATTTGGAGCTTCAAAATGGAGGGGTGGATCAGAATTTGAGGATATGTAGCAAAAGCCTTAAGAAACTAAAGTTTGGGTATTTTTATGATTGTTATTACAAGAACAGTGTTGAGATTGATTGCCCAAACCTTGTTTCGCTGAGTTTTGATTGCATTAGCTTTACCCAGTTTCGACTTAAGAATGCGCCGTCCCTGGTTGAGTTTCATCTTAATATGGTGCACCTGGATAAATACTATGATTGCTGGAGTAAGGCTGTGAAGCTGCTTGGATCAGCGCCGAATGTGAAGTGTGCTAATGTGCAAAATTGGTGGTTCAAGTTGCTGACATCAAAGGATTCTTTCCCAAAAACTTTTACGCTCCACAACCTCAGCCTCTTAGAGCTACGGACAGGGTATACTCAATATGATCTGGTTGGCATGGCTGCAGTACTTGAACTTTGTCCCAATCTTGAGACAATGATTCTTGATTACCTTCACAAGATAGAAGTTGATGAGAGTTTACCAGAAGAGATCTTAAATAAACCAGTTAGATTCAATATGCCAAGACTCAAGCAAGTTAAGATGCTGAAATTTTTTGGATCGGAAGATGAAAATAATTTTGTGACTTTATTGAAAAAGCAAGGAGTTGTCTTACAAAAGATTACACTTTTTCCTATCAAAGTCGAGGGGAACTCATGCCACCAATATCCTCCAATAGTTCTACGTAGAAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

454

Amino Acids

52.82

Weight (kDa)

6.24

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 59 1.6e-07 F-box domain
F-box-like PF12937 19 - 52 2.7e-06 F-box-like
LRR_At1g61320_AtMIF1 PF23622 97 - 410 2.8e-22 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 151 - 281 1.3e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 633
AccI GTMKAC 3 cut(s) 255, 342, 1043
AccII CGCG 5 cut(s) 261, 370, 382, 451, 530
AccIII TCCGGA 1 cut(s) 426
AciI CCGC 7 cut(s) 139, 238, 259, 274, 301, 360, 449
AclWI GGATC 5 cut(s) 76, 144, 684, 925, 1234
AcoI YGGCCR 1 cut(s) 546
AcsI RAATTY 3 cut(s) 21, 682, 1217
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 3 cut(s) 419, 518, 1077
AfiI CCNNNNNNNGG 5 cut(s) 144, 199, 433, 555, 613
AflII CTTAAG 2 cut(s) 707, 824
AgsI TTSAA 6 cut(s) 26, 662, 964, 1082, 1183, 1261
AjiI CACGTC 2 cut(s) 340, 592
AjnI CCWGG 2 cut(s) 840, 870
AjuI GAANNNNNNNTTGG 2 cut(s) 766, 798
AluBI AGCT 6 cut(s) 388, 564, 658, 807, 910, 1030
AluI AGCT 6 cut(s) 388, 564, 658, 807, 910, 1030
Alw21I GWGCWC 3 cut(s) 390, 566, 870
Alw26I GTCTC 3 cut(s) 139, 170, 1094
Alw44I GTGCAC 1 cut(s) 866
AlwI GGATC 5 cut(s) 76, 144, 684, 925, 1234
Aor13HI TCCGGA 1 cut(s) 426
AoxI GGCC 2 cut(s) 114, 546
ApaLI GTGCAC 1 cut(s) 866
ApeKI GCWGC 2 cut(s) 910, 1070
ApoI RAATTY 3 cut(s) 21, 682, 1217
AspLEI GCGC 7 cut(s) 263, 357, 372, 382, 448, 835, 925
AspS9I GGNCC 2 cut(s) 159, 604
AsuC2I CCSGG 2 cut(s) 200, 377
AvaII GGWCC 2 cut(s) 159, 604
BaeGI GKGCMC 2 cut(s) 638, 870
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 1 cut(s) 633
BanII GRGCYC 2 cut(s) 390, 566
BauI CACGAG 1 cut(s) 229
Bbv12I GWGCWC 3 cut(s) 390, 566, 870
BbvCI CCTCAGC 1 cut(s) 1016
BbvI GCAGC 2 cut(s) 897, 1057
BccI CCATC 2 cut(s) 125, 429
BceAI ACGGC 2 cut(s) 347, 820
BciT130I CCWGG 2 cut(s) 842, 872
BcnI CCSGG 2 cut(s) 200, 377
BcoDI GTCTC 3 cut(s) 139, 170, 1094
BfaI CTAG 1 cut(s) 45
BfmI CTRYAG 1 cut(s) 1071
BfoI RGCGCY 2 cut(s) 449, 926
BfrI CTTAAG 2 cut(s) 707, 824
BglII AGATCT 1 cut(s) 1158
BisI GCNGC 3 cut(s) 449, 911, 1071
BlsI GCNGC 3 cut(s) 450, 912, 1072
BmcAI AGTACT 1 cut(s) 1077
Bme1390I CCNGG 4 cut(s) 200, 377, 842, 872
Bme18I GGWCC 2 cut(s) 159, 604
BmgBI CACGTC 2 cut(s) 340, 592
BmgT120I GGNCC 2 cut(s) 159, 604
BmiI GGNNCC 2 cut(s) 161, 635
BmrFI CCNGG 4 cut(s) 200, 377, 842, 872
BmrI ACTGGG 1 cut(s) 808
BmsI GCATC 1 cut(s) 1200
BmuI ACTGGG 1 cut(s) 808
BplI GAGNNNNNCTC 2 cut(s) 1304, 1336
BpmI CTGGAG 1 cut(s) 913
Bpu10I CCTNAGC 1 cut(s) 1016
BpuEI CTTGAG 4 cut(s) 605, 665, 1118, 1181
BpuMI CCSGG 2 cut(s) 200, 377
BsaAI YACGTR 2 cut(s) 516, 1352
BsaBI GATNNNNATC 1 cut(s) 86
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 2 cut(s) 552, 840
BsaWI WCCGGW 1 cut(s) 426
BsaXI ACNNNNNCTCC 2 cut(s) 317, 347
Bsc4I CCNNNNNNNGG 5 cut(s) 144, 199, 433, 555, 613
Bse118I RCCGGY 1 cut(s) 535
Bse1I ACTGG 3 cut(s) 12, 814, 1172
Bse8I GATNNNNATC 1 cut(s) 86
BseAI TCCGGA 1 cut(s) 426
BseBI CCWGG 2 cut(s) 842, 872
BseDI CCNNGG 2 cut(s) 552, 840
BseGI GGATG 3 cut(s) 117, 267, 564
BseJI GATNNNNATC 1 cut(s) 86
BseLI CCNNNNNNNGG 5 cut(s) 144, 199, 433, 555, 613
BseMII CTCAG 4 cut(s) 473, 497, 779, 1030
BseNI ACTGG 3 cut(s) 12, 814, 1172
BseSI GKGCMC 2 cut(s) 638, 870
BseXI GCAGC 2 cut(s) 897, 1057
Bsh1236I CGCG 5 cut(s) 261, 370, 382, 451, 530
Bsh1285I CGRYCG 1 cut(s) 259
BshFI GGCC 2 cut(s) 116, 548
BshNI GGYRCC 1 cut(s) 633
BsiEI CGRYCG 1 cut(s) 259
BsiHKAI GWGCWC 3 cut(s) 390, 566, 870
BsiSI CCGG 4 cut(s) 200, 376, 427, 536
BsiWI CGTACG 1 cut(s) 516
BslFI GGGAC 4 cut(s) 14, 145, 823, 1074
BslI CCNNNNNNNGG 5 cut(s) 144, 199, 433, 555, 613
BsmAI GTCTC 3 cut(s) 139, 170, 1094
BsmBI CGTCTC 2 cut(s) 139, 170
BsmFI GGGAC 4 cut(s) 14, 145, 823, 1074
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 2 cut(s) 116, 548
Bsp1286I GDGCHC 4 cut(s) 390, 566, 638, 870
Bsp13I TCCGGA 1 cut(s) 426
BspACI CCGC 7 cut(s) 139, 238, 259, 274, 301, 360, 449
BspANI GGCC 2 cut(s) 116, 548
BspCNI CTCAG 4 cut(s) 474, 498, 780, 1029
BspEI TCCGGA 1 cut(s) 426
BspFNI CGCG 5 cut(s) 261, 370, 382, 451, 530
BspLI GGNNCC 2 cut(s) 161, 635
BspMAI CTGCAG 1 cut(s) 1075
BspPI GGATC 5 cut(s) 76, 144, 684, 925, 1234
BspT107I GGYRCC 1 cut(s) 633
BspTI CTTAAG 2 cut(s) 707, 824
BsrFI RCCGGY 1 cut(s) 535
BsrI ACTGG 3 cut(s) 12, 814, 1172
BssAI RCCGGY 1 cut(s) 535
BssECI CCNNGG 2 cut(s) 552, 840
BssNAI GTATAC 1 cut(s) 1044
BssNI GRCGYC 1 cut(s) 210
BssSI CACGAG 1 cut(s) 229
Bst1107I GTATAC 1 cut(s) 1044
Bst2BI CACGAG 1 cut(s) 229
Bst2UI CCWGG 2 cut(s) 842, 872
Bst4CI ACNGT 2 cut(s) 553, 755
Bst6I CTCTTC 2 cut(s) 200, 1149
BstACI GRCGYC 1 cut(s) 210
BstAFI CTTAAG 2 cut(s) 707, 824
BstBAI YACGTR 2 cut(s) 516, 1352
BstC8I GCNNGC 2 cut(s) 537, 541
BstDEI CTNAG 6 cut(s) 109, 482, 506, 788, 1016, 1024
BstDSI CCRYGG 1 cut(s) 552
BstF5I GGATG 3 cut(s) 117, 267, 564
BstFNI CGCG 5 cut(s) 261, 370, 382, 451, 530
BstH2I RGCGCY 2 cut(s) 449, 926
BstHHI GCGC 7 cut(s) 263, 357, 372, 382, 448, 835, 925
BstMAI GTCTC 3 cut(s) 139, 170, 1094
BstMCI CGRYCG 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 536, 545
BstNI CCWGG 2 cut(s) 842, 872
BstSCI CCNGG 4 cut(s) 198, 375, 840, 870
BstSFI CTRYAG 1 cut(s) 1071
BstSLI GKGCMC 2 cut(s) 638, 870
BstSNI TACGTA 1 cut(s) 1352
BstUI CGCG 5 cut(s) 261, 370, 382, 451, 530
BstV1I GCAGC 2 cut(s) 897, 1057
BstX2I RGATCY 1 cut(s) 1158
BstYI RGATCY 1 cut(s) 1158
BstZ17I GTATAC 1 cut(s) 1044
BsuRI GGCC 2 cut(s) 116, 548
BtgI CCRYGG 1 cut(s) 552
BtrI CACGTC 2 cut(s) 340, 592
BtsCI GGATG 3 cut(s) 117, 267, 564
BtsIMutI CAGTG 2 cut(s) 19, 760
Cac8I GCNNGC 2 cut(s) 537, 541
CfoI GCGC 7 cut(s) 263, 357, 372, 382, 448, 835, 925
Cfr10I RCCGGY 1 cut(s) 535
Cfr13I GGNCC 2 cut(s) 159, 604
CseI GACGC 1 cut(s) 218
Csp6I GTAC 3 cut(s) 418, 517, 1076
CspCI CAANNNNNGTGG 2 cut(s) 938, 973
CviAII CATG 3 cut(s) 544, 1066, 1323
CviQI GTAC 3 cut(s) 418, 517, 1076
DdeI CTNAG 6 cut(s) 109, 482, 506, 788, 1016, 1024
EaeI YGGCCR 1 cut(s) 546
Eam1104I CTCTTC 2 cut(s) 200, 1149
EarI CTCTTC 2 cut(s) 200, 1149
EciI GGCGGA 3 cut(s) 263, 290, 349
Ecl136II GAGCTC 2 cut(s) 388, 564
Eco105I TACGTA 1 cut(s) 1352
Eco24I GRGCYC 2 cut(s) 390, 566
Eco47I GGWCC 2 cut(s) 159, 604
Eco53kI GAGCTC 2 cut(s) 388, 564
EcoICRI GAGCTC 2 cut(s) 388, 564
EcoRII CCWGG 2 cut(s) 840, 870
EcoT38I GRGCYC 2 cut(s) 390, 566
Esp3I CGTCTC 2 cut(s) 139, 170
FaeI CATG 3 cut(s) 547, 1069, 1326
FaqI GGGAC 4 cut(s) 14, 145, 823, 1074
FatI CATG 3 cut(s) 543, 1065, 1322
FauI CCCGC 1 cut(s) 146
FblI GTMKAC 3 cut(s) 255, 342, 1043
Fnu4HI GCNGC 3 cut(s) 449, 911, 1071
FokI GGATG 3 cut(s) 104, 254, 571
FriOI GRGCYC 2 cut(s) 390, 566
Fsp4HI GCNGC 3 cut(s) 449, 911, 1071
FspBI CTAG 1 cut(s) 45
GlaI GCGC 7 cut(s) 262, 356, 371, 381, 447, 834, 924
GluI GCNGC 3 cut(s) 449, 911, 1071
GsuI CTGGAG 1 cut(s) 913
HaeII RGCGCY 2 cut(s) 449, 926
HaeIII GGCC 2 cut(s) 116, 548
HapII CCGG 4 cut(s) 200, 376, 427, 536
HgaI GACGC 1 cut(s) 218
HhaI GCGC 7 cut(s) 263, 357, 372, 382, 448, 835, 925
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 3 cut(s) 547, 1069, 1326
Hin6I GCGC 7 cut(s) 261, 355, 370, 380, 446, 833, 923
HinP1I GCGC 7 cut(s) 261, 355, 370, 380, 446, 833, 923
HincII GTYRAC 3 cut(s) 205, 256, 343
HindII GTYRAC 3 cut(s) 205, 256, 343
HinfI GANTC 7 cut(s) 100, 344, 502, 983, 1108, 1179, 1194
HpaII CCGG 4 cut(s) 200, 376, 427, 536
Hpy166II GTNNAC 6 cut(s) 205, 256, 343, 868, 1044, 1148
Hpy188I TCNGA 5 cut(s) 105, 288, 507, 681, 1231
Hpy188III TCNNGA 7 cut(s) 79, 229, 427, 584, 644, 1097, 1112
Hpy8I GTNNAC 6 cut(s) 205, 256, 343, 868, 1044, 1148
Hpy99I CGWCG 3 cut(s) 74, 212, 344
HpyAV CCTTC 3 cut(s) 181, 307, 1130
HpyCH4III ACNGT 2 cut(s) 553, 755
HpyCH4IV ACGT 5 cut(s) 339, 515, 519, 591, 1351
HpyCH4V TGCA 4 cut(s) 801, 868, 949, 1073
HpyF10VI GCNNNNNNNGC 2 cut(s) 536, 545
HpyF3I CTNAG 6 cut(s) 109, 482, 506, 788, 1016, 1024
HpySE526I ACGT 5 cut(s) 339, 515, 519, 591, 1351
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 3 cut(s) 547, 1069, 1326
HspAI GCGC 7 cut(s) 261, 355, 370, 380, 446, 833, 923
Kpn2I TCCGGA 1 cut(s) 426
KroI GCCGGC 1 cut(s) 535
KroNI GCCGGC 1 cut(s) 537
LmnI GCTCC 5 cut(s) 362, 429, 616, 655, 1011
Lsp1109I GCAGC 2 cut(s) 897, 1057
LweI GCATC 1 cut(s) 1200
MaeI CTAG 1 cut(s) 45
MaeII ACGT 5 cut(s) 339, 515, 519, 591, 1351
MaeIII GTNAC 4 cut(s) 226, 364, 452, 1249
MboII GAAGA 6 cut(s) 187, 307, 394, 449, 1166, 1244
MflI RGATCY 1 cut(s) 1158
MhlI GDGCHC 4 cut(s) 390, 566, 638, 870
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 6 cut(s) 21, 280, 682, 952, 1217, 1243
MluNI TGGCCA 1 cut(s) 548
MlyI GAGTC 3 cut(s) 338, 511, 1188
MmeI TCCRAC 1 cut(s) 128
Mox20I TGGCCA 1 cut(s) 548
MroI TCCGGA 1 cut(s) 426
MroNI GCCGGC 1 cut(s) 535
MscI TGGCCA 1 cut(s) 548
MseI TTAA 5 cut(s) 708, 825, 858, 1163, 1206
Msp20I TGGCCA 1 cut(s) 548
MspCI CTTAAG 2 cut(s) 707, 824
MspI CCGG 4 cut(s) 200, 376, 427, 536
MspR9I CCNGG 4 cut(s) 200, 377, 842, 872
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 2 cut(s) 842, 872
MvnI CGCG 5 cut(s) 261, 370, 382, 451, 530
MwoI GCNNNNNNNGC 2 cut(s) 536, 545
NaeI GCCGGC 1 cut(s) 537
NciI CCSGG 2 cut(s) 200, 377
NgoMIV GCCGGC 1 cut(s) 535
NlaIII CATG 3 cut(s) 547, 1069, 1326
NlaIV GGNNCC 2 cut(s) 161, 635
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 4 cut(s) 226, 364, 452, 1249
PcsI WCGNNNNNNNCGW 2 cut(s) 66, 448
PctI GAATGC 1 cut(s) 835
PdiI GCCGGC 1 cut(s) 537
PfeI GAWTC 4 cut(s) 100, 983, 1108, 1179
Pfl23II CGTACG 1 cut(s) 516
PkrI GCNGC 3 cut(s) 450, 912, 1072
PleI GAGTC 3 cut(s) 338, 510, 1188
PpsI GAGTC 3 cut(s) 338, 510, 1188
Ppu21I YACGTR 2 cut(s) 516, 1352
Psp124BI GAGCTC 2 cut(s) 390, 566
Psp6I CCWGG 2 cut(s) 840, 870
PspGI CCWGG 2 cut(s) 840, 870
PspLI CGTACG 1 cut(s) 516
PspN4I GGNNCC 2 cut(s) 161, 635
PspPI GGNCC 2 cut(s) 159, 604
PstI CTGCAG 1 cut(s) 1075
PsuI RGATCY 1 cut(s) 1158
RsaI GTAC 3 cut(s) 419, 518, 1077
RsaNI GTAC 3 cut(s) 418, 517, 1076
SacI GAGCTC 2 cut(s) 390, 566
SalI GTCGAC 2 cut(s) 254, 341
SaqAI TTAA 5 cut(s) 708, 825, 858, 1163, 1206
SatI GCNGC 3 cut(s) 449, 911, 1071
Sau96I GGNCC 2 cut(s) 159, 604
ScaI AGTACT 1 cut(s) 1077
SchI GAGTC 3 cut(s) 338, 511, 1188
ScrFI CCNGG 4 cut(s) 200, 377, 842, 872
SduI GDGCHC 4 cut(s) 390, 566, 638, 870
SfaNI GCATC 1 cut(s) 1200
SfcI CTRYAG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 159, 604
SmlI CTYRAG 6 cut(s) 584, 644, 707, 824, 1097, 1196
SmoI CTYRAG 6 cut(s) 584, 644, 707, 824, 1097, 1196
SnaBI TACGTA 1 cut(s) 1352
Sse9I AATT 6 cut(s) 21, 280, 682, 952, 1217, 1243
SsiI CCGC 7 cut(s) 139, 238, 259, 274, 301, 360, 449
SspMI CTAG 1 cut(s) 45
SstI GAGCTC 2 cut(s) 390, 566
StyD4I CCNGG 4 cut(s) 198, 375, 840, 870
TaaI ACNGT 2 cut(s) 553, 755
TaiI ACGT 5 cut(s) 342, 518, 522, 594, 1354
TasI AATT 6 cut(s) 21, 280, 682, 952, 1217, 1243
TatI WGTACW 1 cut(s) 1075
TauI GCSGC 1 cut(s) 451
TfiI GAWTC 4 cut(s) 100, 983, 1108, 1179
Tru1I TTAA 5 cut(s) 708, 825, 858, 1163, 1206
Tru9I TTAA 5 cut(s) 708, 825, 858, 1163, 1206
TscAI CASTG 2 cut(s) 19, 760
TseFI GTSAC 4 cut(s) 226, 364, 452, 1249
TseI GCWGC 2 cut(s) 910, 1070
Tsp45I GTSAC 4 cut(s) 226, 364, 452, 1249
TspDTI ATGAA 4 cut(s) 301, 394, 842, 1251
TspGWI ACGGA 2 cut(s) 617, 1048
TspRI CASTG 2 cut(s) 19, 760
Vha464I CTTAAG 2 cut(s) 707, 824
VneI GTGCAC 1 cut(s) 866
VpaK11BI GGWCC 2 cut(s) 159, 604
XapI RAATTY 3 cut(s) 21, 682, 1217
XmiI GTMKAC 3 cut(s) 255, 342, 1043
XspI CTAG 1 cut(s) 45
ZrmI AGTACT 1 cut(s) 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.