Rroxscaffold_2G00089430

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000349
Physical Location & Seq
Reverse (-)
11441898 .. 11444491
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00089430.1

Sequence Viewer

Length: 1431 bp
ATGCTTTCCCAGTTTCCACAAGCGTTCTCCTCCATGGAAGAAACGACGAGCAATCAAACGGTTCAAGCCCCAAGCGCCACCAATGGATCCCTAACCGACCTCCCTGAAGAAATCCTCATCCACATCCTCTCCTTCCTCCCTACCTTATACGCCGTCCAGACCGCTCTCCTTTCCCGCCAATGCCGTTCCCTCTGGTCCCGCGTTCCCGCCCTGGACTTCTCCTACGACACCTTCCCCTCCGCCGAGCCCGACCCGACCGCCGACGCCGACCCGACCCGCCTCTTCGCTGACTTCGTTGACCGCGCTCTCGTTCTCCGCCCCAACTCTCCGATCCAGACCTTCCGCCTCTCTTTCCTCTACTACCACCGCTACCGCTCCCACGTCGACTCCTGGCTCCGCTGCGCCGTCACGCGCTTCCAGGCGCGTGAGCTCCACCTCGACCTCTACGTTGAGAAGAAGTACCAGAACGAAGTGAGCCTCGATCAGATGTACGATTTCCCTCTCTCCTTGCTGAGAAACTCGCGCGTGGAAGTCTTGAGGCTCACGCGCTGCGATCTCTGGTTGCCGGCTGACATGTCCGCCATGAACCTCTTCACGCTGAGGACGGTTTTTCTGGAACGGATTGATATGACGGACCAGATGGTTATGGATTTCATTTCGGGGTGTCCAAATCTGGAGGACCTGGAGTTTCACAACAGTGGTGGGATGGAGAATTTGAAGATATGTAGCAAAAAGCTTAAGAGGCTTGCGCTTGGGTACTTTTACGACTGTGATTCCAGGAACACGGTCGAGATTGATTGCCCAAACCTTTGGTTTTTGAAGTTTGATTGCTGTAGTTTTACCCAGTTTTGGCTTAAGAATGCGTCGTCTTTAGTTGAGTTTCATATTGCTATTGTTCACGTGGAGCAGTACTACTATTTGTGGAGTAAGGTTGTGAAGCTACTGGAGCAAGCGCCTCATGTGAGGCATCTTAATGTGCAGAATTGGTGGCTTAAGTTTGTGACATCAGAGAATTCTTTCCCGAAAAGCTTCAAGCTCCAGAATGTAAGGCTCTTAGAGCTACGAACATGGTATACTCAATATGATCTTGTTGGCATGGCAGCACTGCTTGAGCTTTGTCCCAATCTCGAGACAATGATTCTTGATCACCTTCACAAGATAGAGGAAGATGAGAGTTTACCAGACGAGTTCTTAAATAAGCCAGTTAAATTCAACATCCCAAGTCTCAAGCATGTTAAGTTGCTAACGTTTACTGGAACAGAAGATGAACATAACTTTGTGACTATGTTGAAAAAGCAAGGAGCTGCATTACAAAAGATTACACTTTTTCCCTTCAAAATTGATGGGAACTCATGTCACCAATATCCTCCGGTAGTTCTACGTAGAAAGCCTCGAGAATGTGAAGCAACAGGATCTTCTCCTTCTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

476

Amino Acids

55.37

Weight (kDa)

5.99

Isoelectric Point (pI)

51.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 31 - 68 3.7e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 111 - 421 8.3e-25 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 128 - 270 1.3e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 164, 375
AccI GTMKAC 2 cut(s) 384, 1073
AccII CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
AclI AACGTT 1 cut(s) 1247
AclWI GGATC 4 cut(s) 81, 94, 325, 1420
AcsI RAATTY 3 cut(s) 712, 1012, 1208
AcuI CTGAAG 1 cut(s) 126
AcvI CACGTG 1 cut(s) 901
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 4 cut(s) 461, 491, 758, 911
AfiI CCNNNNNNNGG 1 cut(s) 849
AflII CTTAAG 3 cut(s) 737, 854, 992
AflIII ACRYGT 1 cut(s) 573
AgsI TTSAA 7 cut(s) 65, 718, 820, 1033, 1213, 1291, 1336
AjiI CACGTC 1 cut(s) 382
AjnI CCWGG 5 cut(s) 210, 389, 417, 681, 776
AleI CACNNNNGTG 1 cut(s) 696
AluBI AGCT 8 cut(s) 430, 736, 940, 1029, 1036, 1060, 1114, 1304
AluI AGCT 8 cut(s) 430, 736, 940, 1029, 1036, 1060, 1114, 1304
Alw21I GWGCWC 1 cut(s) 432
Alw26I GTCTC 2 cut(s) 1124, 1229
AlwI GGATC 4 cut(s) 81, 94, 325, 1420
Ama87I CYCGRG 2 cut(s) 1127, 1392
ApeKI GCWGC 4 cut(s) 399, 549, 1100, 1304
ApoI RAATTY 3 cut(s) 712, 1012, 1208
Asp700I GAANNNNTTC 3 cut(s) 590, 1016, 1028
AspLEI GCGC 9 cut(s) 77, 305, 404, 414, 424, 525, 549, 751, 955
AspS9I GGNCC 3 cut(s) 195, 634, 679
AsuHPI GGTGA 2 cut(s) 1139, 1349
AvaI CYCGRG 2 cut(s) 1127, 1392
AvaII GGWCC 3 cut(s) 195, 634, 679
BamHI GGATCC 1 cut(s) 86
BanII GRGCYC 2 cut(s) 249, 432
BbrPI CACGTG 1 cut(s) 901
Bbv12I GWGCWC 1 cut(s) 432
BbvCI CCTCAGC 1 cut(s) 599
BbvI GCAGC 4 cut(s) 386, 536, 1112, 1291
BccI CCATC 3 cut(s) 634, 700, 1337
BceAI ACGGC 3 cut(s) 137, 168, 389
BciT130I CCWGG 5 cut(s) 212, 391, 419, 683, 778
BclI TGATCA 1 cut(s) 1144
BcoDI GTCTC 2 cut(s) 1124, 1229
BfmI CTRYAG 1 cut(s) 832
BfoI RGCGCY 2 cut(s) 78, 956
BfrI CTTAAG 3 cut(s) 737, 854, 992
BisI GCNGC 4 cut(s) 400, 550, 1101, 1305
BlsI GCNGC 4 cut(s) 401, 551, 1102, 1306
BmcAI AGTACT 1 cut(s) 911
Bme1390I CCNGG 5 cut(s) 212, 391, 419, 683, 778
Bme18I GGWCC 3 cut(s) 195, 634, 679
BmeT110I CYCGRG 2 cut(s) 1127, 1392
BmgBI CACGTC 1 cut(s) 382
BmgT120I GGNCC 3 cut(s) 195, 634, 679
BmiI GGNNCC 3 cut(s) 88, 197, 395
BmrFI CCNGG 5 cut(s) 212, 391, 419, 683, 778
BmrI ACTGGG 2 cut(s) 4, 838
BmsI GCATC 1 cut(s) 976
BmuI ACTGGG 2 cut(s) 4, 838
BpmI CTGGAG 4 cut(s) 695, 704, 965, 1022
Bpu10I CCTNAGC 1 cut(s) 599
BpuEI CTTGAG 3 cut(s) 556, 1130, 1211
BsaAI YACGTR 2 cut(s) 901, 1382
BsaHI GRCGYC 1 cut(s) 264
BsaJI CCNNGG 2 cut(s) 33, 210
BsaWI WCCGGW 1 cut(s) 1369
BsaXI ACNNNNNCTCC 4 cut(s) 113, 143, 371, 401
Bsc4I CCNNNNNNNGG 1 cut(s) 849
Bse118I RCCGGY 1 cut(s) 565
Bse1I ACTGG 5 cut(s) 10, 844, 948, 1202, 1258
BseBI CCWGG 5 cut(s) 212, 391, 419, 683, 778
BseDI CCNNGG 2 cut(s) 33, 210
BseGI GGATG 4 cut(s) 117, 123, 711, 1215
BseLI CCNNNNNNNGG 1 cut(s) 849
BseMII CTCAG 2 cut(s) 503, 590
BseNI ACTGG 5 cut(s) 10, 844, 948, 1202, 1258
BseRI GAGGAG 1 cut(s) 19
BseXI GCAGC 4 cut(s) 386, 536, 1112, 1291
BsgI GTGCAG 1 cut(s) 998
Bsh1236I CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
Bsh1285I CGRYCG 2 cut(s) 258, 789
BsiEI CGRYCG 2 cut(s) 258, 789
BsiHKAI GWGCWC 1 cut(s) 432
BsiHKCI CYCGRG 2 cut(s) 1127, 1392
BsiSI CCGG 2 cut(s) 566, 1370
BslFI GGGAC 2 cut(s) 181, 1104
BslI CCNNNNNNNGG 1 cut(s) 849
BsmAI GTCTC 2 cut(s) 1124, 1229
BsmFI GGGAC 2 cut(s) 181, 1104
BsmI GAATGC 1 cut(s) 865
BsoBI CYCGRG 2 cut(s) 1127, 1392
Bsp1286I GDGCHC 2 cut(s) 249, 432
Bsp143I GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
Bsp19I CCATGG 1 cut(s) 33
BspCNI CTCAG 2 cut(s) 504, 591
BspFNI CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
BspLI GGNNCC 3 cut(s) 88, 197, 395
BspPI GGATC 4 cut(s) 81, 94, 325, 1420
BspTI CTTAAG 3 cut(s) 737, 854, 992
BsrBI CCGCTC 2 cut(s) 164, 375
BsrFI RCCGGY 1 cut(s) 565
BsrI ACTGG 5 cut(s) 10, 844, 948, 1202, 1258
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 2 cut(s) 33, 210
BssMI GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
BssNAI GTATAC 1 cut(s) 1074
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 1 cut(s) 33
Bst1107I GTATAC 1 cut(s) 1074
Bst2UI CCWGG 5 cut(s) 212, 391, 419, 683, 778
Bst4CI ACNGT 5 cut(s) 61, 607, 698, 770, 787
Bst6I CTCTTC 2 cut(s) 287, 596
BstACI GRCGYC 1 cut(s) 264
BstAFI CTTAAG 3 cut(s) 737, 854, 992
BstBAI YACGTR 2 cut(s) 901, 1382
BstC8I GCNNGC 3 cut(s) 567, 747, 951
BstDEI CTNAG 3 cut(s) 512, 599, 1054
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 4 cut(s) 117, 123, 711, 1215
BstFNI CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
BstH2I RGCGCY 2 cut(s) 78, 956
BstHHI GCGC 9 cut(s) 77, 305, 404, 414, 424, 525, 549, 751, 955
BstKTI GATC 7 cut(s) 89, 333, 484, 556, 1087, 1147, 1415
BstMAI GTCTC 2 cut(s) 1124, 1229
BstMBI GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
BstMCI CGRYCG 2 cut(s) 258, 789
BstMWI GCNNNNNNNGC 4 cut(s) 74, 742, 946, 1057
BstNI CCWGG 5 cut(s) 212, 391, 419, 683, 778
BstNSI RCATGY 2 cut(s) 577, 1235
BstSCI CCNGG 5 cut(s) 210, 389, 417, 681, 776
BstSFI CTRYAG 1 cut(s) 832
BstSNI TACGTA 1 cut(s) 1382
BstUI CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
BstV1I GCAGC 4 cut(s) 386, 536, 1112, 1291
BstX2I RGATCY 2 cut(s) 86, 1412
BstXI CCANNNNNNTGG 1 cut(s) 810
BstYI RGATCY 2 cut(s) 86, 1412
BstZ17I GTATAC 1 cut(s) 1074
BtgI CCRYGG 1 cut(s) 33
BtrI CACGTC 1 cut(s) 382
BtsCI GGATG 4 cut(s) 117, 123, 711, 1215
BtsI GCAGTG 1 cut(s) 1103
BtsIMutI CAGTG 2 cut(s) 703, 1103
Cac8I GCNNGC 3 cut(s) 567, 747, 951
CfoI GCGC 9 cut(s) 77, 305, 404, 414, 424, 525, 549, 751, 955
Cfr10I RCCGGY 1 cut(s) 565
Cfr13I GGNCC 3 cut(s) 195, 634, 679
CseI GACGC 2 cut(s) 272, 852
Csp6I GTAC 4 cut(s) 460, 490, 757, 910
CspCI CAANNNNNGTGG 2 cut(s) 682, 717
CviAII CATG 8 cut(s) 34, 574, 583, 959, 1068, 1096, 1232, 1353
CviQI GTAC 4 cut(s) 460, 490, 757, 910
DdeI CTNAG 3 cut(s) 512, 599, 1054
DpnI GATC 7 cut(s) 88, 332, 483, 555, 1086, 1146, 1414
DpnII GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
Eam1104I CTCTTC 2 cut(s) 287, 596
EarI CTCTTC 2 cut(s) 287, 596
EciI GGCGGA 4 cut(s) 229, 305, 332, 568
Ecl136II GAGCTC 1 cut(s) 430
Eco105I TACGTA 1 cut(s) 1382
Eco130I CCWWGG 1 cut(s) 33
Eco24I GRGCYC 2 cut(s) 249, 432
Eco47I GGWCC 3 cut(s) 195, 634, 679
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 126
Eco72I CACGTG 1 cut(s) 901
Eco88I CYCGRG 2 cut(s) 1127, 1392
EcoICRI GAGCTC 1 cut(s) 430
EcoO109I RGGNCCY 1 cut(s) 679
EcoRI GAATTC 1 cut(s) 1012
EcoRII CCWGG 5 cut(s) 210, 389, 417, 681, 776
EcoT14I CCWWGG 1 cut(s) 33
EcoT38I GRGCYC 2 cut(s) 249, 432
ErhI CCWWGG 1 cut(s) 33
FaeI CATG 8 cut(s) 37, 577, 586, 962, 1071, 1099, 1235, 1356
FaqI GGGAC 2 cut(s) 181, 1104
FatI CATG 8 cut(s) 33, 573, 582, 958, 1067, 1095, 1231, 1352
FauI CCCGC 4 cut(s) 182, 206, 214, 284
FbaI TGATCA 1 cut(s) 1144
FblI GTMKAC 2 cut(s) 384, 1073
Fnu4HI GCNGC 4 cut(s) 400, 550, 1101, 1305
FokI GGATG 4 cut(s) 104, 110, 718, 1202
FriOI GRGCYC 2 cut(s) 249, 432
Fsp4HI GCNGC 4 cut(s) 400, 550, 1101, 1305
GlaI GCGC 9 cut(s) 76, 304, 403, 413, 423, 524, 548, 750, 954
GluI GCNGC 4 cut(s) 400, 550, 1101, 1305
GsuI CTGGAG 4 cut(s) 695, 704, 965, 1022
HaeII RGCGCY 2 cut(s) 78, 956
HapII CCGG 2 cut(s) 566, 1370
HgaI GACGC 2 cut(s) 272, 852
HhaI GCGC 9 cut(s) 77, 305, 404, 414, 424, 525, 549, 751, 955
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 8 cut(s) 37, 577, 586, 962, 1071, 1099, 1235, 1356
Hin6I GCGC 9 cut(s) 75, 303, 402, 412, 422, 523, 547, 749, 953
HinP1I GCGC 9 cut(s) 75, 303, 402, 412, 422, 523, 547, 749, 953
HincII GTYRAC 2 cut(s) 298, 385
HindII GTYRAC 2 cut(s) 298, 385
HindIII AAGCTT 2 cut(s) 734, 1027
HinfI GANTC 3 cut(s) 386, 773, 1138
HpaII CCGG 2 cut(s) 566, 1370
HphI GGTGA 2 cut(s) 1139, 1349
Hpy166II GTNNAC 6 cut(s) 298, 385, 898, 1074, 1178, 1251
Hpy188I TCNGA 3 cut(s) 330, 486, 1009
Hpy8I GTNNAC 6 cut(s) 298, 385, 898, 1074, 1178, 1251
Hpy99I CGWCG 4 cut(s) 49, 266, 386, 868
HpyAV CCTTC 6 cut(s) 142, 241, 349, 1160, 1342, 1431
HpyCH4III ACNGT 5 cut(s) 61, 607, 698, 770, 787
HpyCH4IV ACGT 5 cut(s) 381, 447, 900, 1247, 1381
HpyCH4V TGCA 2 cut(s) 979, 1307
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 742, 946, 1057
HpyF3I CTNAG 3 cut(s) 512, 599, 1054
HpySE526I ACGT 5 cut(s) 381, 447, 900, 1247, 1381
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 8 cut(s) 37, 577, 586, 962, 1071, 1099, 1235, 1356
HspAI GCGC 9 cut(s) 75, 303, 402, 412, 422, 523, 547, 749, 953
KroI GCCGGC 1 cut(s) 565
KroNI GCCGGC 1 cut(s) 567
Ksp22I TGATCA 1 cut(s) 1144
Kzo9I GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
LmnI GCTCC 7 cut(s) 380, 399, 435, 904, 946, 1041, 1301
Lsp1109I GCAGC 4 cut(s) 386, 536, 1112, 1291
LweI GCATC 1 cut(s) 976
MaeII ACGT 5 cut(s) 381, 447, 900, 1247, 1381
MaeIII GTNAC 4 cut(s) 406, 1000, 1279, 1355
MalI GATC 7 cut(s) 88, 332, 483, 555, 1086, 1146, 1414
MbiI CCGCTC 2 cut(s) 164, 375
MboI GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
MflI RGATCY 2 cut(s) 86, 1412
MhlI GDGCHC 2 cut(s) 249, 432
MluCI AATT 5 cut(s) 712, 982, 1012, 1208, 1338
MlyI GAGTC 1 cut(s) 380
MroNI GCCGGC 1 cut(s) 565
MroXI GAANNNNTTC 3 cut(s) 590, 1016, 1028
MseI TTAA 7 cut(s) 738, 855, 972, 993, 1193, 1206, 1236
MslI CAYNNNNRTG 2 cut(s) 696, 972
MspA1I CMGCKG 1 cut(s) 399
MspCI CTTAAG 3 cut(s) 737, 854, 992
MspI CCGG 2 cut(s) 566, 1370
MspR9I CCNGG 5 cut(s) 212, 391, 419, 683, 778
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 5 cut(s) 212, 391, 419, 683, 778
MvnI CGCG 7 cut(s) 201, 303, 412, 424, 523, 525, 547
MwoI GCNNNNNNNGC 4 cut(s) 74, 742, 946, 1057
NaeI GCCGGC 1 cut(s) 567
NcoI CCATGG 1 cut(s) 33
NdeII GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
NgoMIV GCCGGC 1 cut(s) 565
NlaIII CATG 8 cut(s) 37, 577, 586, 962, 1071, 1099, 1235, 1356
NlaIV GGNNCC 3 cut(s) 88, 197, 395
NmeAIII GCCGAG 1 cut(s) 268
NmuCI GTSAC 4 cut(s) 406, 1000, 1279, 1355
NspI RCATGY 2 cut(s) 577, 1235
OliI CACNNNNGTG 1 cut(s) 696
PaeR7I CTCGAG 2 cut(s) 1127, 1392
PciI ACATGT 1 cut(s) 573
PcsI WCGNNNNNNNCGW 2 cut(s) 291, 444
PctI GAATGC 1 cut(s) 865
PdiI GCCGGC 1 cut(s) 567
PdmI GAANNNNTTC 3 cut(s) 590, 1016, 1028
PfeI GAWTC 2 cut(s) 773, 1138
PfoI TCCNGGA 1 cut(s) 776
PkrI GCNGC 4 cut(s) 401, 551, 1102, 1306
PleI GAGTC 1 cut(s) 380
PmaCI CACGTG 1 cut(s) 901
PmlI CACGTG 1 cut(s) 901
PpsI GAGTC 1 cut(s) 380
Ppu21I YACGTR 2 cut(s) 901, 1382
PpuMI RGGWCCY 1 cut(s) 679
PscI ACATGT 1 cut(s) 573
Psp124BI GAGCTC 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 1247
Psp5II RGGWCCY 1 cut(s) 679
Psp6I CCWGG 5 cut(s) 210, 389, 417, 681, 776
PspCI CACGTG 1 cut(s) 901
PspGI CCWGG 5 cut(s) 210, 389, 417, 681, 776
PspN4I GGNNCC 3 cut(s) 88, 197, 395
PspPI GGNCC 3 cut(s) 195, 634, 679
PspPPI RGGWCCY 1 cut(s) 679
PsrI GAACNNNNNNTAC 2 cut(s) 1057, 1089
PsuI RGATCY 2 cut(s) 86, 1412
RsaI GTAC 4 cut(s) 461, 491, 758, 911
RsaNI GTAC 4 cut(s) 460, 490, 757, 910
RseI CAYNNNNRTG 2 cut(s) 696, 972
SacI GAGCTC 1 cut(s) 432
SalI GTCGAC 1 cut(s) 383
SaqAI TTAA 7 cut(s) 738, 855, 972, 993, 1193, 1206, 1236
SatI GCNGC 4 cut(s) 400, 550, 1101, 1305
Sau3AI GATC 7 cut(s) 86, 330, 481, 553, 1084, 1144, 1412
Sau96I GGNCC 3 cut(s) 195, 634, 679
ScaI AGTACT 1 cut(s) 911
SchI GAGTC 1 cut(s) 380
ScrFI CCNGG 5 cut(s) 212, 391, 419, 683, 778
SduI GDGCHC 2 cut(s) 249, 432
SfaNI GCATC 1 cut(s) 976
SfcI CTRYAG 1 cut(s) 832
Sfr274I CTCGAG 2 cut(s) 1127, 1392
SinI GGWCC 3 cut(s) 195, 634, 679
SlaI CTCGAG 2 cut(s) 1127, 1392
SmiMI CAYNNNNRTG 2 cut(s) 696, 972
SmlI CTYRAG 8 cut(s) 535, 737, 854, 992, 1109, 1127, 1226, 1392
SmoI CTYRAG 8 cut(s) 535, 737, 854, 992, 1109, 1127, 1226, 1392
SnaBI TACGTA 1 cut(s) 1382
Sse9I AATT 5 cut(s) 712, 982, 1012, 1208, 1338
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 5 cut(s) 210, 389, 417, 681, 776
StyI CCWWGG 1 cut(s) 33
TaaI ACNGT 5 cut(s) 61, 607, 698, 770, 787
TaiI ACGT 5 cut(s) 384, 450, 903, 1250, 1384
TaqI TCGA 6 cut(s) 384, 438, 480, 789, 1128, 1393
TasI AATT 5 cut(s) 712, 982, 1012, 1208, 1338
TatI WGTACW 1 cut(s) 909
TfiI GAWTC 2 cut(s) 773, 1138
Tru1I TTAA 7 cut(s) 738, 855, 972, 993, 1193, 1206, 1236
Tru9I TTAA 7 cut(s) 738, 855, 972, 993, 1193, 1206, 1236
TscAI CASTG 2 cut(s) 703, 1110
TseFI GTSAC 4 cut(s) 406, 1000, 1279, 1355
TseI GCWGC 4 cut(s) 399, 549, 1100, 1304
Tsp45I GTSAC 4 cut(s) 406, 1000, 1279, 1355
TspDTI ATGAA 5 cut(s) 599, 643, 872, 1281, 1416
TspGWI ACGGA 2 cut(s) 634, 647
TspRI CASTG 2 cut(s) 703, 1110
Vha464I CTTAAG 3 cut(s) 737, 854, 992
VpaK11BI GGWCC 3 cut(s) 195, 634, 679
XapI RAATTY 3 cut(s) 712, 1012, 1208
XceI RCATGY 2 cut(s) 577, 1235
XhoI CTCGAG 2 cut(s) 1127, 1392
XmiI GTMKAC 2 cut(s) 384, 1073
XmnI GAANNNNTTC 3 cut(s) 590, 1016, 1028
ZrmI AGTACT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.