RchiOBHm_Chr7g0197991

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000349
Physical Location & Seq
Forward (+)
15752747 .. 15755715
2969 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17712

Sequence Viewer

Length: 1566 bp
ATGAAAGAGACCCCAGTTCCACCACCTCTTCCAAACTCTAATCAGAACCTAAACGACCTACCGCAGGAAGTCCTCGTCTATATCTTGTCCTTCCTCCCCACAATAGAGGCGATCCAGACCTCTCTCATTTCCAGGAAATGGCGAAACCTCTGGTTCTTTCTCACCTCTTTCAACTTCTCCTTCGAAACCTGCTTTCCTTACTTCGATAATCCTCTTCCTTTTTATACTCGCCGGATGACTCGACCCTTCGCCAACTTTGTGGATCGCGCTCTCACCACTCGCCCCGCCGATCCTGCCGTCCATTCCTTCCGTCTATCATTCATCTACGACTCCGATTACGAAGTTCGTGTCGAGTCTTGGATACGCACCGCCGTGACGCACCTCCAAGCCCGTGAGCTGCACCTCGACTTCTATATCGACTATGACTATGACTTCTCTGTTTACAAGTATGAATTCTTCTTCTCAGAGCTGAGAAATGGCTGCGTACAAGTATTGAAACTCACCAGTTGTAATATTACACTGCCGGACGACATGGATCTTGGCTTGCTGAGATCCATGTTTCTCGATCAGGTTAATCTAGAAGACGAGGAGGTGCGGAAATTGTTTTCGGGGTGTCCAAATCTCGAGCACTTTGAGCTCCGAAACTGTCTGGGGGTGAAGGGTTTGTTTATACGTAGCACCAAGCTTAAGAAGCTTGCTCTTGGATTTGTTCCTAATCTAGCTGCATTCAGCTGGAACACTACAGAGATCGAGATTGATTGCCCTAACCTTCTTTCATTAAGTTTCACTGAATGCGACTTTAACCAGTTTGTGCTTAAAAAAGCGGCTGCACTAGTCGAGCTTTCTATTCATCTTTCAGTGCTTGAGTCTGAGGACTATCATTTATGGAGGAGGACTGTGCGGCTACTCCTGCAAGCACCTAATGTTAAGAAGCTTAAGATGGCTGGCTGTGTGCGGGTCGGAGATATGGCGGTAGTGTCGGTGACGCCAGGATTTCTATCGTTGAAGGCTCGACTGGGTGGGATTGGATTGGGCGTACCCGATCCTTGGATGATCCGATCTTCGGTGGTGGCGGCTCTTGAAGGTTGCATGGGATTTGATTTTGACGATCGTGGTGGAGTGACGGTTCACTTTCCCCTACTGGAGTTGGAATCGATTTTGCTTTACTCTAGAGTGGACGGTAATGGCAACTTGAGCGCTAGTTATACCAGGTGTGGTGGCCTCAATGGCACCTATGGTGGATTTGGTTGCGACAATAATGGTTTTCTGACGGCGGCAGCGGCGAGGGGCATTTATCAGGTGGCTGTTGGTTGGCAAATTCTTCACGCTCCAAAGGTTCATGGTTTGGGATCCTTTGGGCTAGGATTGTTGGTGGACTGGGTTGTCTCTTTGGCAACGAACCATGGTGGCGGCTACGTCTTGCTTTGCTATGGTGGATACTGTGGAGCTATTTCGTCCAATTGGGCTAGATGGGCCTGGTATGGGTTGGAGGGTCTGTTGCAAGGCTGGATATGGATGGGTTGGGCCTGCTTTTGGAGTGGCTGGGCCTCTTGGGCATTGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

521

Amino Acids

58.71

Weight (kDa)

5.85

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 51 2e-08 F-box domain
F-box-like PF12937 17 - 50 1.7e-06 F-box-like
LRR_At1g61320_AtMIF1 PF23622 103 - 326 4.8e-16 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 118 - 234 1e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1382
Acc36I ACCTGC 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 1229
AccB7I CCANNNNNTGG 1 cut(s) 138
AccII CGCG 1 cut(s) 267
AclWI GGATC 9 cut(s) 106, 270, 284, 543, 546, 1037, 1048, 1344, 1357
AcsI RAATTY 2 cut(s) 452, 1317
AcyI GRCGYC 1 cut(s) 986
AfaI GTAC 2 cut(s) 486, 1038
AfeI AGCGCT 1 cut(s) 1198
AfiI CCNNNNNNNGG 6 cut(s) 64, 138, 1047, 1063, 1482, 1533
AflII CTTAAG 2 cut(s) 686, 935
AgsI TTSAA 5 cut(s) 172, 496, 1006, 1082, 1561
AhlI ACTAGT 1 cut(s) 832
AjnI CCWGG 4 cut(s) 131, 988, 1208, 1475
AleI CACNNNNGTG 1 cut(s) 371
AloI GAACNNNNNNTCC 2 cut(s) 1110, 1142
Alw21I GWGCWC 2 cut(s) 630, 639
Alw26I GTCTC 2 cut(s) 2, 1390
AlwI GGATC 9 cut(s) 106, 270, 284, 543, 546, 1037, 1048, 1344, 1357
Ama87I CYCGRG 1 cut(s) 623
Aor51HI AGCGCT 1 cut(s) 1198
AoxI GGCC 4 cut(s) 1219, 1473, 1524, 1545
ApeKI GCWGC 5 cut(s) 397, 480, 722, 827, 1277
ApoI RAATTY 2 cut(s) 452, 1317
ArsI GACNNNNNNTTYG 2 cut(s) 333, 365
AspLEI GCGC 2 cut(s) 269, 1199
AspS9I GGNCC 3 cut(s) 1473, 1524, 1545
AsuHPI GGTGA 5 cut(s) 154, 265, 493, 667, 994
AsuII TTCGAA 1 cut(s) 183
AvaI CYCGRG 1 cut(s) 623
BamHI GGATCC 1 cut(s) 1349
BanI GGYRCC 1 cut(s) 1229
BanII GRGCYC 1 cut(s) 639
BarI GAAGNNNNNNTAC 2 cut(s) 440, 472
BbsI GAAGAC 1 cut(s) 588
Bbv12I GWGCWC 2 cut(s) 630, 639
BbvI GCAGC 5 cut(s) 384, 467, 709, 814, 1289
BccI CCATC 3 cut(s) 934, 1464, 1510
BceAI ACGGC 3 cut(s) 281, 356, 1287
BciT130I CCWGG 4 cut(s) 133, 990, 1210, 1477
BciVI GTATCC 2 cut(s) 354, 1430
BcoDI GTCTC 2 cut(s) 2, 1390
BcuI ACTAGT 1 cut(s) 832
BfaI CTAG 7 cut(s) 578, 719, 833, 1170, 1200, 1361, 1467
BfmI CTRYAG 1 cut(s) 741
BfoI RGCGCY 1 cut(s) 1200
BfrI CTTAAG 2 cut(s) 686, 935
BfuAI ACCTGC 1 cut(s) 197
BfuI GTATCC 2 cut(s) 354, 1430
BglI GCCNNNNNGGC 2 cut(s) 1227, 1553
Bme1390I CCNGG 4 cut(s) 133, 990, 1210, 1477
BmeT110I CYCGRG 1 cut(s) 623
BmgT120I GGNCC 3 cut(s) 1473, 1524, 1545
BmiI GGNNCC 2 cut(s) 1231, 1351
BmrFI CCNGG 4 cut(s) 133, 990, 1210, 1477
BmrI ACTGGG 3 cut(s) 8, 1025, 1387
BmuI ACTGGG 3 cut(s) 8, 1025, 1387
BpiI GAAGAC 1 cut(s) 588
BpmI CTGGAG 1 cut(s) 1163
Bpu14I TTCGAA 1 cut(s) 183
BpuEI CTTGAG 2 cut(s) 884, 1213
Bsa29I ATCGAT 1 cut(s) 1154
BsaAI YACGTR 1 cut(s) 674
BsaBI GATNNNNATC 1 cut(s) 997
BsaHI GRCGYC 1 cut(s) 986
BsaI GGTCTC 1 cut(s) 2
BsaJI CCNNGG 2 cut(s) 1046, 1402
BsaXI ACNNNNNCTCC 4 cut(s) 1110, 1140, 1481, 1511
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 138, 1047, 1063, 1482, 1533
Bse1I ACTGG 6 cut(s) 14, 504, 805, 1020, 1146, 1382
Bse8I GATNNNNATC 1 cut(s) 997
BseBI CCWGG 4 cut(s) 133, 990, 1210, 1477
BseCI ATCGAT 1 cut(s) 1154
BseDI CCNNGG 2 cut(s) 1046, 1402
BseGI GGATG 3 cut(s) 240, 1056, 1521
BseJI GATNNNNATC 1 cut(s) 997
BseLI CCNNNNNNNGG 6 cut(s) 64, 138, 1047, 1063, 1482, 1533
BseMII CTCAG 4 cut(s) 461, 477, 539, 861
BseNI ACTGG 6 cut(s) 14, 504, 805, 1020, 1146, 1382
BseRI GAGGAG 2 cut(s) 602, 904
BseXI GCAGC 5 cut(s) 384, 467, 709, 814, 1289
BseYI CCCAGC 1 cut(s) 1542
BsgI GTGCAG 2 cut(s) 383, 813
Bsh1236I CGCG 1 cut(s) 267
Bsh1285I CGRYCG 1 cut(s) 1111
BshFI GGCC 4 cut(s) 1221, 1475, 1526, 1547
BshNI GGYRCC 1 cut(s) 1229
BshVI ATCGAT 1 cut(s) 1154
BsiEI CGRYCG 1 cut(s) 1111
BsiHKAI GWGCWC 2 cut(s) 630, 639
BsiHKCI CYCGRG 1 cut(s) 623
BsiSI CCGG 2 cut(s) 232, 524
BslI CCNNNNNNNGG 6 cut(s) 64, 138, 1047, 1063, 1482, 1533
BsmAI GTCTC 2 cut(s) 2, 1390
BsmI GAATGC 2 cut(s) 725, 797
BsnI GGCC 4 cut(s) 1221, 1475, 1526, 1547
Bso31I GGTCTC 1 cut(s) 2
BsoBI CYCGRG 1 cut(s) 623
Bsp119I TTCGAA 1 cut(s) 183
Bsp1286I GDGCHC 2 cut(s) 630, 639
Bsp19I CCATGG 1 cut(s) 1402
BspANI GGCC 4 cut(s) 1221, 1475, 1526, 1547
BspCNI CTCAG 4 cut(s) 462, 476, 540, 862
BspDI ATCGAT 1 cut(s) 1154
BspFNI CGCG 1 cut(s) 267
BspLI GGNNCC 2 cut(s) 1231, 1351
BspMI ACCTGC 1 cut(s) 197
BspPI GGATC 9 cut(s) 106, 270, 284, 543, 546, 1037, 1048, 1344, 1357
BspT104I TTCGAA 1 cut(s) 183
BspT107I GGYRCC 1 cut(s) 1229
BspTI CTTAAG 2 cut(s) 686, 935
BspTNI GGTCTC 1 cut(s) 2
BsrI ACTGG 6 cut(s) 14, 504, 805, 1020, 1146, 1382
BssECI CCNNGG 2 cut(s) 1046, 1402
BssNI GRCGYC 1 cut(s) 986
BssT1I CCWWGG 2 cut(s) 1046, 1402
Bst2UI CCWGG 4 cut(s) 133, 990, 1210, 1477
Bst4CI ACNGT 5 cut(s) 647, 898, 1126, 1181, 1442
Bst6I CTCTTC 2 cut(s) 33, 219
BstACI GRCGYC 1 cut(s) 986
BstAFI CTTAAG 2 cut(s) 686, 935
BstBAI YACGTR 1 cut(s) 674
BstBI TTCGAA 1 cut(s) 183
BstC8I GCNNGC 5 cut(s) 545, 696, 915, 946, 1528
BstDEI CTNAG 4 cut(s) 463, 470, 548, 870
BstDSI CCRYGG 1 cut(s) 1402
BstENI CCTNNNNNAGG 1 cut(s) 62
BstF5I GGATG 3 cut(s) 240, 1056, 1521
BstFNI CGCG 1 cut(s) 267
BstH2I RGCGCY 1 cut(s) 1200
BstHHI GCGC 2 cut(s) 269, 1199
BstMAI GTCTC 2 cut(s) 2, 1390
BstMCI CGRYCG 1 cut(s) 1111
BstMWI GCNNNNNNNGC 9 cut(s) 293, 634, 691, 910, 1194, 1227, 1280, 1472, 1553
BstNI CCWGG 4 cut(s) 133, 990, 1210, 1477
BstSCI CCNGG 4 cut(s) 131, 988, 1208, 1475
BstSFI CTRYAG 1 cut(s) 741
BstSNI TACGTA 1 cut(s) 674
BstUI CGCG 1 cut(s) 267
BstV1I GCAGC 5 cut(s) 384, 467, 709, 814, 1289
BstV2I GAAGAC 1 cut(s) 588
BstX2I RGATCY 3 cut(s) 535, 551, 1349
BstXI CCANNNNNNTGG 1 cut(s) 259
BstYI RGATCY 3 cut(s) 535, 551, 1349
Bsu15I ATCGAT 1 cut(s) 1154
BsuI GTATCC 2 cut(s) 354, 1430
BsuRI GGCC 4 cut(s) 1221, 1475, 1526, 1547
BsuTUI ATCGAT 1 cut(s) 1154
BtgI CCRYGG 1 cut(s) 1402
BtsCI GGATG 3 cut(s) 240, 1056, 1521
BtsI GCAGTG 1 cut(s) 518
BtsIMutI CAGTG 3 cut(s) 518, 786, 864
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 5 cut(s) 545, 696, 915, 946, 1528
CfoI GCGC 2 cut(s) 269, 1199
Cfr13I GGNCC 3 cut(s) 1473, 1524, 1545
ClaI ATCGAT 1 cut(s) 1154
CseI GACGC 2 cut(s) 385, 994
CsiI ACCWGGT 1 cut(s) 1208
Csp6I GTAC 2 cut(s) 485, 1037
CviAII CATG 5 cut(s) 532, 556, 1090, 1340, 1403
CviQI GTAC 2 cut(s) 485, 1037
DdeI CTNAG 4 cut(s) 463, 470, 548, 870
DrdI GACNNNNNNGTC 1 cut(s) 1382
DseDI GACNNNNNNGTC 1 cut(s) 1382
Eam1104I CTCTTC 2 cut(s) 33, 219
EarI CTCTTC 2 cut(s) 33, 219
Ecl136II GAGCTC 1 cut(s) 637
Eco105I TACGTA 1 cut(s) 674
Eco130I CCWWGG 2 cut(s) 1046, 1402
Eco24I GRGCYC 1 cut(s) 639
Eco31I GGTCTC 1 cut(s) 2
Eco47III AGCGCT 1 cut(s) 1198
Eco53kI GAGCTC 1 cut(s) 637
Eco88I CYCGRG 1 cut(s) 623
EcoICRI GAGCTC 1 cut(s) 637
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 452
EcoRII CCWGG 4 cut(s) 131, 988, 1208, 1475
EcoT14I CCWWGG 2 cut(s) 1046, 1402
EcoT38I GRGCYC 1 cut(s) 639
ErhI CCWWGG 2 cut(s) 1046, 1402
FaeI CATG 5 cut(s) 535, 559, 1093, 1343, 1406
FatI CATG 5 cut(s) 531, 555, 1089, 1339, 1402
FauI CCCGC 2 cut(s) 292, 948
FokI GGATG 3 cut(s) 247, 1063, 1528
FriOI GRGCYC 1 cut(s) 639
FspBI CTAG 7 cut(s) 578, 719, 833, 1170, 1200, 1361, 1467
GlaI GCGC 2 cut(s) 268, 1198
GsaI CCCAGC 1 cut(s) 1546
GsuI CTGGAG 1 cut(s) 1163
HaeII RGCGCY 1 cut(s) 1200
HaeIII GGCC 4 cut(s) 1221, 1475, 1526, 1547
HapII CCGG 2 cut(s) 232, 524
HgaI GACGC 2 cut(s) 385, 994
HhaI GCGC 2 cut(s) 269, 1199
Hin1I GRCGYC 1 cut(s) 986
Hin1II CATG 5 cut(s) 535, 559, 1093, 1343, 1406
Hin6I GCGC 2 cut(s) 267, 1197
HinP1I GCGC 2 cut(s) 267, 1197
HindIII AAGCTT 3 cut(s) 683, 692, 932
HinfI GANTC 5 cut(s) 238, 329, 353, 866, 1151
HpaII CCGG 2 cut(s) 232, 524
HphI GGTGA 5 cut(s) 154, 265, 493, 667, 994
Hpy166II GTNNAC 4 cut(s) 442, 1129, 1177, 1375
Hpy188I TCNGA 8 cut(s) 45, 334, 466, 641, 871, 962, 1058, 1269
Hpy188III TCNNGA 7 cut(s) 115, 563, 578, 623, 751, 1079, 1170
Hpy8I GTNNAC 4 cut(s) 442, 1129, 1177, 1375
HpyAV CCTTC 8 cut(s) 100, 190, 256, 316, 652, 779, 1000, 1076
HpyCH4III ACNGT 5 cut(s) 647, 898, 1126, 1181, 1442
HpyCH4IV ACGT 2 cut(s) 673, 1416
HpyCH4V TGCA 6 cut(s) 400, 725, 830, 913, 1089, 1501
HpyF10VI GCNNNNNNNGC 9 cut(s) 293, 634, 691, 910, 1194, 1227, 1280, 1472, 1553
HpyF3I CTNAG 4 cut(s) 463, 470, 548, 870
HpySE526I ACGT 2 cut(s) 673, 1416
Hsp92I GRCGYC 1 cut(s) 986
Hsp92II CATG 5 cut(s) 535, 559, 1093, 1343, 1406
HspAI GCGC 2 cut(s) 267, 1197
LmnI GCTCC 3 cut(s) 642, 1333, 1445
Lsp1109I GCAGC 5 cut(s) 384, 467, 709, 814, 1289
MabI ACCWGGT 1 cut(s) 1208
MaeI CTAG 7 cut(s) 578, 719, 833, 1170, 1200, 1361, 1467
MaeII ACGT 2 cut(s) 673, 1416
MaeIII GTNAC 3 cut(s) 373, 982, 1120
MboII GAAGA 7 cut(s) 20, 206, 448, 451, 593, 1053, 1313
MfeI CAATTG 1 cut(s) 1459
MflI RGATCY 3 cut(s) 535, 551, 1349
MhlI GDGCHC 2 cut(s) 630, 639
MluCI AATT 4 cut(s) 452, 599, 1317, 1459
MlyI GAGTC 4 cut(s) 232, 323, 362, 875
MmeI TCCRAC 3 cut(s) 940, 1128, 1467
MseI TTAA 7 cut(s) 573, 687, 779, 801, 816, 927, 936
MslI CAYNNNNRTG 1 cut(s) 371
MspA1I CMGCKG 2 cut(s) 732, 1280
MspCI CTTAAG 2 cut(s) 686, 935
MspI CCGG 2 cut(s) 232, 524
MspR9I CCNGG 4 cut(s) 133, 990, 1210, 1477
MunI CAATTG 1 cut(s) 1459
Mva1269I GAATGC 2 cut(s) 725, 797
MvaI CCWGG 4 cut(s) 133, 990, 1210, 1477
MvnI CGCG 1 cut(s) 267
MwoI GCNNNNNNNGC 9 cut(s) 293, 634, 691, 910, 1194, 1227, 1280, 1472, 1553
NcoI CCATGG 1 cut(s) 1402
NlaIII CATG 5 cut(s) 535, 559, 1093, 1343, 1406
NlaIV GGNNCC 2 cut(s) 1231, 1351
NmuCI GTSAC 3 cut(s) 373, 982, 1120
NspV TTCGAA 1 cut(s) 183
OliI CACNNNNGTG 1 cut(s) 371
PaeR7I CTCGAG 1 cut(s) 623
PctI GAATGC 2 cut(s) 725, 797
PfeI GAWTC 1 cut(s) 1151
PflMI CCANNNNNTGG 1 cut(s) 138
PfoI TCCNGGA 1 cut(s) 131
Ple19I CGATCG 1 cut(s) 1111
PleI GAGTC 4 cut(s) 232, 323, 361, 874
PpsI GAGTC 4 cut(s) 232, 323, 361, 874
Ppu21I YACGTR 1 cut(s) 674
Psp124BI GAGCTC 1 cut(s) 639
Psp6I CCWGG 4 cut(s) 131, 988, 1208, 1475
PspFI CCCAGC 1 cut(s) 1542
PspGI CCWGG 4 cut(s) 131, 988, 1208, 1475
PspN4I GGNNCC 2 cut(s) 1231, 1351
PspPI GGNCC 3 cut(s) 1473, 1524, 1545
PsuI RGATCY 3 cut(s) 535, 551, 1349
PvuI CGATCG 1 cut(s) 1111
PvuII CAGCTG 1 cut(s) 732
RsaI GTAC 2 cut(s) 486, 1038
RsaNI GTAC 2 cut(s) 485, 1037
RseI CAYNNNNRTG 1 cut(s) 371
SacI GAGCTC 1 cut(s) 639
SaqAI TTAA 7 cut(s) 573, 687, 779, 801, 816, 927, 936
Sau96I GGNCC 3 cut(s) 1473, 1524, 1545
SchI GAGTC 4 cut(s) 232, 323, 362, 875
ScrFI CCNGG 4 cut(s) 133, 990, 1210, 1477
SduI GDGCHC 2 cut(s) 630, 639
SexAI ACCWGGT 1 cut(s) 1208
SfcI CTRYAG 1 cut(s) 741
Sfr274I CTCGAG 1 cut(s) 623
SfuI TTCGAA 1 cut(s) 183
SlaI CTCGAG 1 cut(s) 623
SmiMI CAYNNNNRTG 1 cut(s) 371
SmlI CTYRAG 5 cut(s) 623, 686, 863, 935, 1192
SmoI CTYRAG 5 cut(s) 623, 686, 863, 935, 1192
SnaBI TACGTA 1 cut(s) 674
SpeI ACTAGT 1 cut(s) 832
Sse9I AATT 4 cut(s) 452, 599, 1317, 1459
SspI AATATT 1 cut(s) 514
SspMI CTAG 7 cut(s) 578, 719, 833, 1170, 1200, 1361, 1467
SstI GAGCTC 1 cut(s) 639
StyD4I CCNGG 4 cut(s) 131, 988, 1208, 1475
StyI CCWWGG 2 cut(s) 1046, 1402
TaaI ACNGT 5 cut(s) 647, 898, 1126, 1181, 1442
TaiI ACGT 2 cut(s) 676, 1419
TasI AATT 4 cut(s) 452, 599, 1317, 1459
TauI GCSGC 6 cut(s) 827, 904, 1076, 1277, 1283, 1413
TfiI GAWTC 1 cut(s) 1151
Tru1I TTAA 7 cut(s) 573, 687, 779, 801, 816, 927, 936
Tru9I TTAA 7 cut(s) 573, 687, 779, 801, 816, 927, 936
TscAI CASTG 3 cut(s) 525, 793, 864
TseFI GTSAC 3 cut(s) 373, 982, 1120
TseI GCWGC 5 cut(s) 397, 480, 722, 827, 1277
Tsp45I GTSAC 3 cut(s) 373, 982, 1120
TspDTI ATGAA 6 cut(s) 17, 310, 465, 765, 839, 1328
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 3 cut(s) 525, 793, 864
Van91I CCANNNNNTGG 1 cut(s) 138
Vha464I CTTAAG 2 cut(s) 686, 935
XagI CCTNNNNNAGG 1 cut(s) 62
XapI RAATTY 2 cut(s) 452, 1317
XbaI TCTAGA 2 cut(s) 577, 1169
XhoI CTCGAG 1 cut(s) 623
XspI CTAG 7 cut(s) 578, 719, 833, 1170, 1200, 1361, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.