Rh2CG534600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000349
Physical Location & Seq
Forward (+)
71075664 .. 71082930
7267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG534600.1

Sequence Viewer

Length: 1380 bp
ATGCTCCCAGAAATTATGGAACAAGCCAGTACTGAAATTCAAGCCCCAAATCCAAACCCTAGTCGAACCCTAAACGATCTCCCCGACGAAATCCTGATCCAAATCCTCTCCTTGATTCCGACCTTAGAGGCCATCCACAACTCTCTCGTCTCCCGCCAATGGCGATCCCTCTGGTCCCGTCTCCCCTTCCTCGACTTCTCCTACCACCTCTTCCCGGTCAACGACGCCGAACCTCTCCCCGTCACGAGCCACCGCTTCGCCGAGTTCGTCGACCGCGCTCTCATCCTCCGCCCCAATTCTCCGATCAAAACCTTCCGCCTCTCTTTCATCTTCTACTACTACTACACCTCCCACGTCGACTCCTGGGTGCGCTCCGCCGTCACGCGCTTCCGGGCGCGTGAGCTCGACCTCGACTTCTTCATCGACAAAGAGTACCATCTCCGGAGCGAGGAAGATCGAGCGCCGCGTGACAAGTATGATTTCCCTTTCTCTGTGCTGAGAAACGGGTGCGTTGAGAGTCTGAGGCTCACGTACGTTGATCTCGCGTTGCCGGCGAGCATGGCCACCGTGGGGATGAGCTCGGTGAGGTCGATGTTTCTTGAGGACGTGGATTTGACGGACCAGATGTGGGAGCGTTTGATTTTGGGGTGCCCCAATCTTGAGTATTTGGAGCTTCGAAATGGAGGGGTGGATCAGAATTTGAGGATATGTAGCAAAAGCCTTAAGAAACTAAAGTTTGGGTATTTTTATGATGGTTATTACAAGAACAGTGTTGAGATTGATTGCCCAAACCTTGTTTCGCTGAGTTTTGATTGCATTAGCTTTACCCAGTTTCGACTTAAGAATGCGCCGTCCCTGGTTGAGTTTCATCTTAATATGGTGCACCTGGATAAATACTATGATTGCTGGAGTAAGGCTGTGAAGCTGCTTGGATCAGCGCCGAATGTGAAGTGTGCTAATGTGCAAAATTGGTGGTTCAAGTTGCTGACATCAAAGGATTCTTTCCCAAAAACTTTTACGCTCCACAACCTCAGCCTCTTAGAGCTACGGACAGGGTATACTCAATATGATCTGGTTGGCATGGCTGCAGTACTTGAACTTTGTCCCAATCTTGAGACAATGATTCTTGATTACCTTCGCAAGATAGAAGTTGATGAGAGTTTACCAGAAGAGATCTTAAATAAACCAGTTAGATTCAATATGCCAAGACTCAAGCAAGTTAAGATGCTGAAATTTTTTGGATCGGAAGATGAAAATAATTTTGTGACTTTGTTGAAAAAGCAAGGAGTTGTCTTACAAAAGATTACACTTTTTCCTATCAAAGTCGAGGGGAACTCATGCCACCAATATCCTCCAATAGTTCTACGTAGAAACCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

459

Amino Acids

53.45

Weight (kDa)

6.53

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 64 1.6e-07 F-box domain
F-box-like PF12937 24 - 57 2.8e-06 F-box-like
LRR_At1g61320_AtMIF1 PF23622 102 - 415 1.4e-20 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 156 - 286 2.2e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 648
AccI GTMKAC 3 cut(s) 270, 357, 1058
AccII CGCG 5 cut(s) 276, 385, 397, 466, 545
AccIII TCCGGA 1 cut(s) 441
AciI CCGC 7 cut(s) 154, 253, 274, 289, 316, 375, 464
AclWI GGATC 5 cut(s) 91, 159, 699, 940, 1249
AcoI YGGCCR 1 cut(s) 561
AcsI RAATTY 3 cut(s) 36, 697, 1232
AcyI GRCGYC 1 cut(s) 225
AfaI GTAC 4 cut(s) 31, 434, 533, 1092
AfiI CCNNNNNNNGG 5 cut(s) 159, 214, 448, 570, 628
AflII CTTAAG 2 cut(s) 722, 839
AgsI TTSAA 5 cut(s) 41, 979, 1097, 1198, 1276
AjiI CACGTC 2 cut(s) 355, 607
AjnI CCWGG 3 cut(s) 362, 855, 885
AjuI GAANNNNNNNTTGG 2 cut(s) 781, 813
AluBI AGCT 6 cut(s) 403, 579, 673, 822, 925, 1045
AluI AGCT 6 cut(s) 403, 579, 673, 822, 925, 1045
Alw21I GWGCWC 3 cut(s) 405, 581, 885
Alw26I GTCTC 3 cut(s) 154, 185, 1109
Alw44I GTGCAC 1 cut(s) 881
AlwI GGATC 5 cut(s) 91, 159, 699, 940, 1249
Aor13HI TCCGGA 1 cut(s) 441
AoxI GGCC 2 cut(s) 129, 561
ApaLI GTGCAC 1 cut(s) 881
ApeKI GCWGC 2 cut(s) 925, 1085
ApoI RAATTY 3 cut(s) 36, 697, 1232
AspLEI GCGC 7 cut(s) 278, 372, 387, 397, 463, 850, 940
AspS9I GGNCC 2 cut(s) 174, 619
AsuC2I CCSGG 2 cut(s) 215, 392
AsuHPI GGTGA 1 cut(s) 595
AsuII TTCGAA 1 cut(s) 676
AvaII GGWCC 2 cut(s) 174, 619
BaeGI GKGCMC 2 cut(s) 653, 885
BalI TGGCCA 1 cut(s) 563
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 2 cut(s) 405, 581
BauI CACGAG 1 cut(s) 244
Bbv12I GWGCWC 3 cut(s) 405, 581, 885
BbvCI CCTCAGC 1 cut(s) 1031
BbvI GCAGC 2 cut(s) 912, 1072
BccI CCATC 3 cut(s) 140, 444, 746
BceAI ACGGC 2 cut(s) 362, 835
BciT130I CCWGG 3 cut(s) 364, 857, 887
BcnI CCSGG 2 cut(s) 215, 392
BcoDI GTCTC 3 cut(s) 154, 185, 1109
BfaI CTAG 1 cut(s) 60
BfmI CTRYAG 1 cut(s) 1086
BfoI RGCGCY 2 cut(s) 464, 941
BfrI CTTAAG 2 cut(s) 722, 839
BglII AGATCT 1 cut(s) 1173
BisI GCNGC 3 cut(s) 464, 926, 1086
BlsI GCNGC 3 cut(s) 465, 927, 1087
BmcAI AGTACT 2 cut(s) 31, 1092
Bme1390I CCNGG 5 cut(s) 215, 364, 392, 857, 887
Bme18I GGWCC 2 cut(s) 174, 619
BmgBI CACGTC 2 cut(s) 355, 607
BmgT120I GGNCC 2 cut(s) 174, 619
BmiI GGNNCC 2 cut(s) 176, 650
BmrFI CCNGG 5 cut(s) 215, 364, 392, 857, 887
BmrI ACTGGG 1 cut(s) 823
BmsI GCATC 1 cut(s) 1215
BmuI ACTGGG 1 cut(s) 823
BplI GAGNNNNNCTC 2 cut(s) 1319, 1351
BpmI CTGGAG 1 cut(s) 928
Bpu10I CCTNAGC 1 cut(s) 1031
Bpu14I TTCGAA 1 cut(s) 676
BpuEI CTTGAG 4 cut(s) 620, 680, 1133, 1196
BpuMI CCSGG 2 cut(s) 215, 392
BsaAI YACGTR 2 cut(s) 531, 1367
BsaBI GATNNNNATC 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 225
BsaJI CCNNGG 3 cut(s) 363, 567, 855
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 4 cut(s) 332, 344, 362, 374
Bsc4I CCNNNNNNNGG 5 cut(s) 159, 214, 448, 570, 628
Bse118I RCCGGY 1 cut(s) 550
Bse1I ACTGG 3 cut(s) 27, 829, 1187
Bse8I GATNNNNATC 1 cut(s) 101
BseAI TCCGGA 1 cut(s) 441
BseBI CCWGG 3 cut(s) 364, 857, 887
BseDI CCNNGG 3 cut(s) 363, 567, 855
BseGI GGATG 3 cut(s) 132, 282, 579
BseJI GATNNNNATC 1 cut(s) 101
BseLI CCNNNNNNNGG 5 cut(s) 159, 214, 448, 570, 628
BseMII CTCAG 4 cut(s) 488, 512, 794, 1045
BseNI ACTGG 3 cut(s) 27, 829, 1187
BseSI GKGCMC 2 cut(s) 653, 885
BseXI GCAGC 2 cut(s) 912, 1072
Bsh1236I CGCG 5 cut(s) 276, 385, 397, 466, 545
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 2 cut(s) 131, 563
BshNI GGYRCC 1 cut(s) 648
BsiEI CGRYCG 1 cut(s) 274
BsiHKAI GWGCWC 3 cut(s) 405, 581, 885
BsiSI CCGG 4 cut(s) 215, 391, 442, 551
BsiWI CGTACG 1 cut(s) 531
BslFI GGGAC 3 cut(s) 160, 838, 1089
BslI CCNNNNNNNGG 5 cut(s) 159, 214, 448, 570, 628
BsmAI GTCTC 3 cut(s) 154, 185, 1109
BsmBI CGTCTC 2 cut(s) 154, 185
BsmFI GGGAC 3 cut(s) 160, 838, 1089
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 2 cut(s) 131, 563
Bsp119I TTCGAA 1 cut(s) 676
Bsp1286I GDGCHC 4 cut(s) 405, 581, 653, 885
Bsp13I TCCGGA 1 cut(s) 441
BspACI CCGC 7 cut(s) 154, 253, 274, 289, 316, 375, 464
BspANI GGCC 2 cut(s) 131, 563
BspCNI CTCAG 4 cut(s) 489, 513, 795, 1044
BspEI TCCGGA 1 cut(s) 441
BspFNI CGCG 5 cut(s) 276, 385, 397, 466, 545
BspLI GGNNCC 2 cut(s) 176, 650
BspMAI CTGCAG 1 cut(s) 1090
BspPI GGATC 5 cut(s) 91, 159, 699, 940, 1249
BspT104I TTCGAA 1 cut(s) 676
BspT107I GGYRCC 1 cut(s) 648
BspTI CTTAAG 2 cut(s) 722, 839
BsrFI RCCGGY 1 cut(s) 550
BsrI ACTGG 3 cut(s) 27, 829, 1187
BssAI RCCGGY 1 cut(s) 550
BssECI CCNNGG 3 cut(s) 363, 567, 855
BssNAI GTATAC 1 cut(s) 1059
BssNI GRCGYC 1 cut(s) 225
BssSI CACGAG 1 cut(s) 244
Bst1107I GTATAC 1 cut(s) 1059
Bst2BI CACGAG 1 cut(s) 244
Bst2UI CCWGG 3 cut(s) 364, 857, 887
Bst4CI ACNGT 2 cut(s) 568, 770
Bst6I CTCTTC 2 cut(s) 215, 1164
BstACI GRCGYC 1 cut(s) 225
BstAFI CTTAAG 2 cut(s) 722, 839
BstBAI YACGTR 2 cut(s) 531, 1367
BstBI TTCGAA 1 cut(s) 676
BstC8I GCNNGC 2 cut(s) 552, 556
BstDEI CTNAG 6 cut(s) 124, 497, 521, 803, 1031, 1039
BstDSI CCRYGG 1 cut(s) 567
BstF5I GGATG 3 cut(s) 132, 282, 579
BstFNI CGCG 5 cut(s) 276, 385, 397, 466, 545
BstH2I RGCGCY 2 cut(s) 464, 941
BstHHI GCGC 7 cut(s) 278, 372, 387, 397, 463, 850, 940
BstMAI GTCTC 3 cut(s) 154, 185, 1109
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 2 cut(s) 551, 560
BstNI CCWGG 3 cut(s) 364, 857, 887
BstSCI CCNGG 5 cut(s) 213, 362, 390, 855, 885
BstSFI CTRYAG 1 cut(s) 1086
BstSLI GKGCMC 2 cut(s) 653, 885
BstSNI TACGTA 1 cut(s) 1367
BstUI CGCG 5 cut(s) 276, 385, 397, 466, 545
BstV1I GCAGC 2 cut(s) 912, 1072
BstX2I RGATCY 1 cut(s) 1173
BstYI RGATCY 1 cut(s) 1173
BstZ17I GTATAC 1 cut(s) 1059
BsuRI GGCC 2 cut(s) 131, 563
BtgI CCRYGG 1 cut(s) 567
BtrI CACGTC 2 cut(s) 355, 607
BtsCI GGATG 3 cut(s) 132, 282, 579
BtsIMutI CAGTG 1 cut(s) 775
Cac8I GCNNGC 2 cut(s) 552, 556
CfoI GCGC 7 cut(s) 278, 372, 387, 397, 463, 850, 940
Cfr10I RCCGGY 1 cut(s) 550
Cfr13I GGNCC 2 cut(s) 174, 619
CseI GACGC 1 cut(s) 233
Csp6I GTAC 4 cut(s) 30, 433, 532, 1091
CspCI CAANNNNNGTGG 2 cut(s) 953, 988
CviAII CATG 3 cut(s) 559, 1081, 1338
CviQI GTAC 4 cut(s) 30, 433, 532, 1091
DdeI CTNAG 6 cut(s) 124, 497, 521, 803, 1031, 1039
EaeI YGGCCR 1 cut(s) 561
Eam1104I CTCTTC 2 cut(s) 215, 1164
EarI CTCTTC 2 cut(s) 215, 1164
EciI GGCGGA 3 cut(s) 278, 305, 364
Ecl136II GAGCTC 2 cut(s) 403, 579
Eco105I TACGTA 1 cut(s) 1367
Eco24I GRGCYC 2 cut(s) 405, 581
Eco47I GGWCC 2 cut(s) 174, 619
Eco53kI GAGCTC 2 cut(s) 403, 579
EcoICRI GAGCTC 2 cut(s) 403, 579
EcoRII CCWGG 3 cut(s) 362, 855, 885
EcoT38I GRGCYC 2 cut(s) 405, 581
Esp3I CGTCTC 2 cut(s) 154, 185
FaeI CATG 3 cut(s) 562, 1084, 1341
FaqI GGGAC 3 cut(s) 160, 838, 1089
FatI CATG 3 cut(s) 558, 1080, 1337
FauI CCCGC 1 cut(s) 161
FblI GTMKAC 3 cut(s) 270, 357, 1058
Fnu4HI GCNGC 3 cut(s) 464, 926, 1086
FokI GGATG 3 cut(s) 119, 269, 586
FriOI GRGCYC 2 cut(s) 405, 581
Fsp4HI GCNGC 3 cut(s) 464, 926, 1086
FspBI CTAG 1 cut(s) 60
GlaI GCGC 7 cut(s) 277, 371, 386, 396, 462, 849, 939
GluI GCNGC 3 cut(s) 464, 926, 1086
GsuI CTGGAG 1 cut(s) 928
HaeII RGCGCY 2 cut(s) 464, 941
HaeIII GGCC 2 cut(s) 131, 563
HapII CCGG 4 cut(s) 215, 391, 442, 551
HgaI GACGC 1 cut(s) 233
HhaI GCGC 7 cut(s) 278, 372, 387, 397, 463, 850, 940
Hin1I GRCGYC 1 cut(s) 225
Hin1II CATG 3 cut(s) 562, 1084, 1341
Hin6I GCGC 7 cut(s) 276, 370, 385, 395, 461, 848, 938
HinP1I GCGC 7 cut(s) 276, 370, 385, 395, 461, 848, 938
HincII GTYRAC 3 cut(s) 220, 271, 358
HindII GTYRAC 3 cut(s) 220, 271, 358
HinfI GANTC 7 cut(s) 115, 359, 517, 998, 1123, 1194, 1209
HpaII CCGG 4 cut(s) 215, 391, 442, 551
HphI GGTGA 1 cut(s) 595
Hpy166II GTNNAC 6 cut(s) 220, 271, 358, 883, 1059, 1163
Hpy188I TCNGA 5 cut(s) 120, 303, 522, 696, 1246
Hpy188III TCNNGA 7 cut(s) 94, 244, 442, 599, 659, 1112, 1127
Hpy8I GTNNAC 6 cut(s) 220, 271, 358, 883, 1059, 1163
Hpy99I CGWCG 4 cut(s) 89, 227, 272, 359
HpyAV CCTTC 3 cut(s) 196, 322, 1145
HpyCH4III ACNGT 2 cut(s) 568, 770
HpyCH4IV ACGT 5 cut(s) 354, 530, 534, 606, 1366
HpyCH4V TGCA 4 cut(s) 816, 883, 964, 1088
HpyF10VI GCNNNNNNNGC 2 cut(s) 551, 560
HpyF3I CTNAG 6 cut(s) 124, 497, 521, 803, 1031, 1039
HpySE526I ACGT 5 cut(s) 354, 530, 534, 606, 1366
Hsp92I GRCGYC 1 cut(s) 225
Hsp92II CATG 3 cut(s) 562, 1084, 1341
HspAI GCGC 7 cut(s) 276, 370, 385, 395, 461, 848, 938
Kpn2I TCCGGA 1 cut(s) 441
KroI GCCGGC 1 cut(s) 550
KroNI GCCGGC 1 cut(s) 552
LmnI GCTCC 6 cut(s) 9, 377, 444, 631, 670, 1026
Lsp1109I GCAGC 2 cut(s) 912, 1072
LweI GCATC 1 cut(s) 1215
MaeI CTAG 1 cut(s) 60
MaeII ACGT 5 cut(s) 354, 530, 534, 606, 1366
MaeIII GTNAC 4 cut(s) 241, 379, 467, 1264
MboII GAAGA 6 cut(s) 202, 322, 409, 464, 1181, 1259
MflI RGATCY 1 cut(s) 1173
MhlI GDGCHC 4 cut(s) 405, 581, 653, 885
MlsI TGGCCA 1 cut(s) 563
MluCI AATT 7 cut(s) 12, 36, 295, 697, 967, 1232, 1258
MluNI TGGCCA 1 cut(s) 563
MlyI GAGTC 3 cut(s) 353, 526, 1203
MmeI TCCRAC 1 cut(s) 143
Mox20I TGGCCA 1 cut(s) 563
MroI TCCGGA 1 cut(s) 441
MroNI GCCGGC 1 cut(s) 550
MscI TGGCCA 1 cut(s) 563
MseI TTAA 5 cut(s) 723, 840, 873, 1178, 1221
Msp20I TGGCCA 1 cut(s) 563
MspCI CTTAAG 2 cut(s) 722, 839
MspI CCGG 4 cut(s) 215, 391, 442, 551
MspR9I CCNGG 5 cut(s) 215, 364, 392, 857, 887
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 3 cut(s) 364, 857, 887
MvnI CGCG 5 cut(s) 276, 385, 397, 466, 545
MwoI GCNNNNNNNGC 2 cut(s) 551, 560
NaeI GCCGGC 1 cut(s) 552
NciI CCSGG 2 cut(s) 215, 392
NgoMIV GCCGGC 1 cut(s) 550
NlaIII CATG 3 cut(s) 562, 1084, 1341
NlaIV GGNNCC 2 cut(s) 176, 650
NmeAIII GCCGAG 1 cut(s) 286
NmuCI GTSAC 4 cut(s) 241, 379, 467, 1264
NspV TTCGAA 1 cut(s) 676
PcsI WCGNNNNNNNCGW 4 cut(s) 81, 264, 463, 587
PctI GAATGC 1 cut(s) 850
PdiI GCCGGC 1 cut(s) 552
PfeI GAWTC 4 cut(s) 115, 998, 1123, 1194
Pfl23II CGTACG 1 cut(s) 531
PkrI GCNGC 3 cut(s) 465, 927, 1087
PleI GAGTC 3 cut(s) 353, 525, 1203
PpsI GAGTC 3 cut(s) 353, 525, 1203
Ppu21I YACGTR 2 cut(s) 531, 1367
Psp124BI GAGCTC 2 cut(s) 405, 581
Psp6I CCWGG 3 cut(s) 362, 855, 885
PspGI CCWGG 3 cut(s) 362, 855, 885
PspLI CGTACG 1 cut(s) 531
PspN4I GGNNCC 2 cut(s) 176, 650
PspPI GGNCC 2 cut(s) 174, 619
PstI CTGCAG 1 cut(s) 1090
PsuI RGATCY 1 cut(s) 1173
RsaI GTAC 4 cut(s) 31, 434, 533, 1092
RsaNI GTAC 4 cut(s) 30, 433, 532, 1091
SacI GAGCTC 2 cut(s) 405, 581
SalI GTCGAC 2 cut(s) 269, 356
SaqAI TTAA 5 cut(s) 723, 840, 873, 1178, 1221
SatI GCNGC 3 cut(s) 464, 926, 1086
Sau96I GGNCC 2 cut(s) 174, 619
ScaI AGTACT 2 cut(s) 31, 1092
SchI GAGTC 3 cut(s) 353, 526, 1203
ScrFI CCNGG 5 cut(s) 215, 364, 392, 857, 887
SduI GDGCHC 4 cut(s) 405, 581, 653, 885
SfaNI GCATC 1 cut(s) 1215
SfcI CTRYAG 1 cut(s) 1086
SfuI TTCGAA 1 cut(s) 676
SinI GGWCC 2 cut(s) 174, 619
SmlI CTYRAG 6 cut(s) 599, 659, 722, 839, 1112, 1211
SmoI CTYRAG 6 cut(s) 599, 659, 722, 839, 1112, 1211
SnaBI TACGTA 1 cut(s) 1367
Sse9I AATT 7 cut(s) 12, 36, 295, 697, 967, 1232, 1258
SsiI CCGC 7 cut(s) 154, 253, 274, 289, 316, 375, 464
SspMI CTAG 1 cut(s) 60
SstI GAGCTC 2 cut(s) 405, 581
StyD4I CCNGG 5 cut(s) 213, 362, 390, 855, 885
TaaI ACNGT 2 cut(s) 568, 770
TaiI ACGT 5 cut(s) 357, 533, 537, 609, 1369
TasI AATT 7 cut(s) 12, 36, 295, 697, 967, 1232, 1258
TatI WGTACW 2 cut(s) 29, 1090
TauI GCSGC 1 cut(s) 466
TfiI GAWTC 4 cut(s) 115, 998, 1123, 1194
Tru1I TTAA 5 cut(s) 723, 840, 873, 1178, 1221
Tru9I TTAA 5 cut(s) 723, 840, 873, 1178, 1221
TscAI CASTG 1 cut(s) 775
TseFI GTSAC 4 cut(s) 241, 379, 467, 1264
TseI GCWGC 2 cut(s) 925, 1085
Tsp45I GTSAC 4 cut(s) 241, 379, 467, 1264
TspDTI ATGAA 4 cut(s) 316, 409, 857, 1266
TspGWI ACGGA 2 cut(s) 632, 1063
TspRI CASTG 1 cut(s) 775
Vha464I CTTAAG 2 cut(s) 722, 839
VneI GTGCAC 1 cut(s) 881
VpaK11BI GGWCC 2 cut(s) 174, 619
XapI RAATTY 3 cut(s) 36, 697, 1232
XmiI GTMKAC 3 cut(s) 270, 357, 1058
XspI CTAG 1 cut(s) 60
ZrmI AGTACT 2 cut(s) 31, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.